Miyakogusa Predicted Gene

Lj5g3v0310210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0310210.1 tr|C7J4Y9|C7J4Y9_ORYSJ Os07g0586000 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os07g05860,68.89,0.00000000008,seg,NULL; B-LYMPHOCYTE
ANTIGEN-RELATED,NULL,CUFF.52849.1
         (330 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G59600.1 | Symbols: ZCW7 | ZCW7 | chr1:21889927-21891910 REVE...   343   1e-94

>AT1G59600.1 | Symbols: ZCW7 | ZCW7 | chr1:21889927-21891910 REVERSE
           LENGTH=324
          Length = 324

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 177/338 (52%), Positives = 232/338 (68%), Gaps = 33/338 (9%)

Query: 10  SMKQVTPTSTVDID-NGLTLVPRIKLNLTVHPSTPTTLTNPIDHWKMKRALIDFLNSS-- 66
           S+++++P  T+DI+ NGL LV R+KLNLT+HP  P+ ++  ID W++KR+LID+L +S  
Sbjct: 3   SLEELSPIETLDIEENGLALVSRVKLNLTIHPVVPS-VSKSIDEWQLKRSLIDYLKNSVV 61

Query: 67  HSLSIPEENLQXXXXXXXXXXXXXXAVATGTLHIWDLTFL----PQTEND---------T 113
            S+++PEE++                VA G+L I DL FL     + END          
Sbjct: 62  TSVTVPEEDIVVRRHKDLKKRKREEPVAHGSLFIRDLGFLDGKKKKKENDGERDVKELEK 121

Query: 114 SVSQWRSRFAEKVNGTELNLQGVRFTLEVSVPVGDDFDAVKKDWEEFYAFGN-RGLRREP 172
               WR    EK+NG ELNL+GV++ L V +P+ DDF+ +KKDWEEFYAFG+ R  RRE 
Sbjct: 122 KFLDWRKSLVEKMNGIELNLEGVKYKLSVVLPISDDFEKLKKDWEEFYAFGHSREGRREA 181

Query: 173 DTIVIKGVPSRWFAEPRVSSKPSMLVTHTIFSKFGKIRNLNVAEDDDFGKDANEDSGDLV 232
           DTI+++GVPSRWFAEPRVSSKPSMLVTHTIFS FGKIRNLNVAEDDD GKDA+EDSGDL+
Sbjct: 182 DTIILRGVPSRWFAEPRVSSKPSMLVTHTIFSSFGKIRNLNVAEDDDLGKDADEDSGDLI 241

Query: 233 SGLYCKIVVQFEKYIDFHDALRVLCSRSLQKQGSRLKADYEVSWDKDGFFRYSRTQTQEK 292
           SGL+CKIVVQFEKY DF +A++  C RS++K+G+RLKADYE++WDK GFFR SR     +
Sbjct: 242 SGLHCKIVVQFEKYNDFVNAMKAFCGRSMEKEGTRLKADYELTWDKIGFFRNSRKPLDNR 301

Query: 293 NNGVSKIATQQNRSEAPRRQSYNSRQSPDRVRPRRFQE 330
           + G              R +S+   Q  D +R +RF+E
Sbjct: 302 DGGY-------------RNESFGCNQ--DDLRRKRFRE 324