Miyakogusa Predicted Gene

Lj5g3v0309110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0309110.1 tr|Q8DMF5|Q8DMF5_THEEB Tsl0163 protein
OS=Thermosynechococcus elongatus (strain BP-1) GN=tsl0163
PE=,67.14,1e-18,ParBc,ParB-like nuclease;
UNCHARACTERIZED,Sulfiredoxin; no description,NULL;
ParB/Sulfiredoxin,ParB-,NODE_70688_length_622_cov_56.485531.path2.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31170.2 | Symbols: ATSRX, SRX | sulfiredoxin | chr1:11133521...   141   1e-34
AT1G31170.1 | Symbols: ATSRX, SRX | sulfiredoxin | chr1:11133521...   141   1e-34
AT1G31170.4 | Symbols: SRX | sulfiredoxin | chr1:11133521-111346...   133   3e-32
AT1G31170.3 | Symbols: ATSRX, SRX | sulfiredoxin | chr1:11133521...   131   8e-32

>AT1G31170.2 | Symbols: ATSRX, SRX | sulfiredoxin |
           chr1:11133521-11134228 FORWARD LENGTH=125
          Length = 125

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 70/73 (95%)

Query: 1   MRTRANDQKKVEELMDSIAEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKI 60
           MRTR+NDQ KV+ELMDSI +IGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKI
Sbjct: 53  MRTRSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKI 112

Query: 61  RRGTKETLRHHLR 73
           R+GTKETLRHHLR
Sbjct: 113 RKGTKETLRHHLR 125


>AT1G31170.1 | Symbols: ATSRX, SRX | sulfiredoxin |
           chr1:11133521-11134228 FORWARD LENGTH=125
          Length = 125

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 64/73 (87%), Positives = 70/73 (95%)

Query: 1   MRTRANDQKKVEELMDSIAEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKI 60
           MRTR+NDQ KV+ELMDSI +IGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKI
Sbjct: 53  MRTRSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKI 112

Query: 61  RRGTKETLRHHLR 73
           R+GTKETLRHHLR
Sbjct: 113 RKGTKETLRHHLR 125


>AT1G31170.4 | Symbols: SRX | sulfiredoxin | chr1:11133521-11134686
           FORWARD LENGTH=198
          Length = 198

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 66/69 (95%)

Query: 1   MRTRANDQKKVEELMDSIAEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKI 60
           MRTR+NDQ KV+ELMDSI +IGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKI
Sbjct: 53  MRTRSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKI 112

Query: 61  RRGTKETLR 69
           R+GTKETLR
Sbjct: 113 RKGTKETLR 121


>AT1G31170.3 | Symbols: ATSRX, SRX | sulfiredoxin |
           chr1:11133521-11134228 FORWARD LENGTH=123
          Length = 123

 Score =  131 bits (330), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 68/73 (93%), Gaps = 2/73 (2%)

Query: 1   MRTRANDQKKVEELMDSIAEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKI 60
           MRTR+NDQ KV+ELMDSI +IGLQ  IDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKI
Sbjct: 53  MRTRSNDQNKVKELMDSIRQIGLQ--IDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKI 110

Query: 61  RRGTKETLRHHLR 73
           R+GTKETLRHHLR
Sbjct: 111 RKGTKETLRHHLR 123