Miyakogusa Predicted Gene

Lj5g3v0309100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0309100.1 tr|Q2MGQ9|Q2MGQ9_MEDTR 14 kDa zinc-binding
protein OS=Medicago truncatula GN=MTR_4g084190 PE=2
SV=1,82.42,0,HISTRIAD,Histidine triad (HIT) protein; no
description,HIT-like domain; seg,NULL; HIT_1,Histidine
tr,NODE_45436_length_646_cov_53.476780.path2.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31160.1 | Symbols: HINT 2 | HISTIDINE TRIAD NUCLEOTIDE-BINDI...   214   2e-56
AT3G56490.1 | Symbols: HIT3, HINT1 | HIS triad family protein 3 ...   189   7e-49
AT5G48545.1 | Symbols: HINT3 | histidine triad nucleotide-bindin...    52   1e-07

>AT1G31160.1 | Symbols: HINT 2 | HISTIDINE TRIAD NUCLEOTIDE-BINDING
           2 | chr1:11122880-11124106 REVERSE LENGTH=187
          Length = 187

 Score =  214 bits (546), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/162 (64%), Positives = 119/162 (73%)

Query: 1   MSQRAFVIKANILGVSKFVQCRRFPFSTXXXXXXXXXXXXXXXXXDSGAPTIFDKIINKE 60
           ++ R F     ++ V  + + +R   ST                 D+GAPTIFDKII KE
Sbjct: 26  VTSRIFFSTGELIRVLPYTRSKRLICSTRAAHNEEAAAKAAASVADTGAPTIFDKIIAKE 85

Query: 61  IPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEARHGEILGQLLYAAKIV 120
           IPS +VYEDE VLAFRDINP+APVHVL+IPK RDGLT L KAE RH E+LGQLL+A+KIV
Sbjct: 86  IPSDIVYEDENVLAFRDINPQAPVHVLVIPKLRDGLTSLGKAEPRHVEVLGQLLHASKIV 145

Query: 121 AEKEGILDGFRVVINSGPAGCQSVYHLHLHVLGGRQMKWPPG 162
           AEKEGILDGFRVVIN+G   CQSVYHLHLHVLGGRQMKWPPG
Sbjct: 146 AEKEGILDGFRVVINNGVEACQSVYHLHLHVLGGRQMKWPPG 187


>AT3G56490.1 | Symbols: HIT3, HINT1 | HIS triad family protein 3 |
           chr3:20941532-20943129 FORWARD LENGTH=147
          Length = 147

 Score =  189 bits (480), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 83/116 (71%), Positives = 104/116 (89%)

Query: 47  SGAPTIFDKIINKEIPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEARH 106
           S +PTIFDKII+KEIPS+VV+ED+KVLAFRDI P+ PVH+L+IPK RDGLT L+KAE RH
Sbjct: 32  SDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLSKAEERH 91

Query: 107 GEILGQLLYAAKIVAEKEGILDGFRVVINSGPAGCQSVYHLHLHVLGGRQMKWPPG 162
            +ILG+LLY AK+VA++EG+ +GFR+VIN GP GCQSVYH+H+H++GGRQM WPPG
Sbjct: 92  IDILGRLLYTAKLVAKQEGLAEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 147


>AT5G48545.1 | Symbols: HINT3 | histidine triad nucleotide-binding 3
           | chr5:19676228-19677945 FORWARD LENGTH=197
          Length = 197

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 51  TIFDKIINKEIPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEARHGEIL 110
            +F KII  E P   +YED+  L   D NP +  H LIIPK      E            
Sbjct: 50  CVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCS 109

Query: 111 GQLLYAAKIVAEKEGILDGFRVVINSGPAGCQSVYHLHLHVLGGRQ 156
              L +  IV  K    D F +++N+G A  Q ++H H+H++  ++
Sbjct: 110 KVPLISNAIV--KATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKE 153