Miyakogusa Predicted Gene
- Lj5g3v0308860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0308860.1 tr|D7MV54|D7MV54_ARALL Armadillo/beta-catenin
repeat family protein OS=Arabidopsis lyrata subsp.
lyr,34.39,0.0000000005,ARM_REPEAT,Armadillo; no
description,Armadillo-like helical; Arm,Armadillo; ANKYRIN AND
ARMADILLO RE,CUFF.52838.1
(353 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 377 e-105
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 338 2e-93
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 193 1e-49
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 174 8e-44
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 172 2e-43
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 172 2e-43
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 172 3e-43
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 172 3e-43
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 166 2e-41
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 166 2e-41
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 161 6e-40
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 159 2e-39
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 159 3e-39
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 148 4e-36
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 137 8e-33
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 87 1e-17
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 87 2e-17
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 87 3e-17
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 87 3e-17
AT4G12710.1 | Symbols: | ARM repeat superfamily protein | chr4:... 86 4e-17
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 86 5e-17
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 80 3e-15
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 80 3e-15
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 79 5e-15
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 79 6e-15
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 76 3e-14
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 74 1e-13
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 70 2e-12
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 69 4e-12
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 67 2e-11
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 64 2e-10
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 64 2e-10
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 62 6e-10
AT2G25130.1 | Symbols: | ARM repeat superfamily protein | chr2:... 59 4e-09
AT1G77460.2 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 58 8e-09
AT1G77460.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C... 58 8e-09
AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 ... 57 3e-08
AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 ... 56 4e-08
AT5G14510.1 | Symbols: | ARM repeat superfamily protein | chr5:... 56 5e-08
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 55 1e-07
AT5G13060.1 | Symbols: ABAP1 | ARMADILLO BTB protein 1 | chr5:41... 54 2e-07
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 54 2e-07
AT1G01830.1 | Symbols: | ARM repeat superfamily protein | chr1:... 53 3e-07
AT1G01830.3 | Symbols: | ARM repeat superfamily protein | chr1:... 53 3e-07
AT1G01830.2 | Symbols: | ARM repeat superfamily protein | chr1:... 53 3e-07
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 52 7e-07
AT3G20170.1 | Symbols: | ARM repeat superfamily protein | chr3:... 50 2e-06
AT2G22125.1 | Symbols: CSI1 | binding | chr2:9406793-9414223 FOR... 50 3e-06
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 50 3e-06
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 50 3e-06
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 49 4e-06
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/337 (62%), Positives = 227/337 (67%), Gaps = 4/337 (1%)
Query: 5 SYTYMGRXXXXXXXXXXXXXXXXXXXXXXXXGEFATASSQTRRRLLIACASENXXXXXXX 64
S+TYMGR GEF TASS++RR LL++CASEN
Sbjct: 10 SFTYMGRKFSDLSLNDDSSAFSDCNSDRS--GEFPTASSESRR-LLLSCASENSDDLINH 66
Query: 65 XXXXXXXXXX-XXXXXAAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGV 123
AAMEIRLL+KNKPENRIKIAKAGAIKP EYGV
Sbjct: 67 LVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGV 126
Query: 124 TAILNLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRS 183
TAILNLSLCDENKE IASSGAIKPLVRALK GTPTAKENAACALLRLSQ EE+K AIGRS
Sbjct: 127 TAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRS 186
Query: 184 GAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVD 243
GAIPLLV+LL+TGG R KKDASTALYSLCS +ENKIRAV++GIMK LVELMADF SNMVD
Sbjct: 187 GAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVD 246
Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTM 303
+QRQKE+AV ILLQLCEE+V YRTM
Sbjct: 247 KSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRTM 306
Query: 304 VAREGAIPPLVALTQNGTNRAKQKAEKLIELLRQPRS 340
VAREGAIPPLVAL+Q GT+RAKQKAE LIELLRQPRS
Sbjct: 307 VAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRS 343
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 207/306 (67%), Gaps = 3/306 (0%)
Query: 37 EFATASSQTR-RRLLIACASENXXXXX-XXXXXXXXXXXXXXXXXAAMEIRLLAKNKPEN 94
EF T +S++R R+L ++CA +N AAMEIRLL+KNKPEN
Sbjct: 36 EFPTTTSESRQRKLFLSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPEN 95
Query: 95 RIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELIASSGAIKPLVRALKA 154
RIK+AKAGAIKP EYGVTA+LNLSLCDENKE+I SSGA+KPLV AL+
Sbjct: 96 RIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRL 155
Query: 155 GTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIRGKKDASTALYSLCSV 214
GTPT KENAACALLRLSQ EE+K IGRSGAIPLLV+LL+ GG R KKDASTALYSLCS
Sbjct: 156 GTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCST 215
Query: 215 RENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 274
ENK RAV++GIMK LVELM DFES+MVD
Sbjct: 216 NENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEI 275
Query: 275 XXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQNGTNR-AKQKAEKLIE 333
+QRQKEI+V ILLQLCEE+V YRTMVAREGA+PPLVAL+Q +R AK KAE LIE
Sbjct: 276 VEAGTQRQKEISVSILLQLCEESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIE 335
Query: 334 LLRQPR 339
LLRQPR
Sbjct: 336 LLRQPR 341
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 163/262 (62%), Gaps = 2/262 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
AA ++RLLAKN+ +NR+ I ++GAI+ E+ VTA+LNLSL D+NK +I
Sbjct: 203 AAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVI 262
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIR 199
A+ GAIK LV LK GT T+K+NAACALL L+ EE+K +IG GAIP LVSLL G R
Sbjct: 263 AAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCR 322
Query: 200 GKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXX 259
GKKDA T LY LC++++NK RAV AG +K LV+L+A+ + M +
Sbjct: 323 GKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGK 382
Query: 260 XXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQN 319
S + KE A++ LLQLC ++V R ++ REGAIPPLV L+Q+
Sbjct: 383 EAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQS 442
Query: 320 G--TNRAKQKAEKLIELLRQPR 339
G + RAK+KAE+L+ LR+PR
Sbjct: 443 GSVSVRAKRKAERLLGYLREPR 464
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 144/259 (55%), Gaps = 1/259 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
A EIR L+K +NRI IA+AGAI E +T +LNLS+ + NKELI
Sbjct: 351 AVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELI 410
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIR 199
+GA+ +V+ L+AGT A+ENAA L LS A+E+K IG SGAIP LV LL+ G R
Sbjct: 411 MFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPR 470
Query: 200 GKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESN-MVDXXXXXXXXXXXXXXX 258
GKKDA+TAL++LC NK RAV+AGI+ LV++++D + MVD
Sbjct: 471 GKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDA 530
Query: 259 XXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQ 318
R +E A ILL LC+ + + R GA+ PL+ L++
Sbjct: 531 KSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSK 590
Query: 319 NGTNRAKQKAEKLIELLRQ 337
NGT R K+KA L+ELLR+
Sbjct: 591 NGTERGKRKAISLLELLRK 609
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 146/263 (55%), Gaps = 1/263 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
A E+RLLAK+ +NRI I +GAI E VTA+LNLS+ D NK+ I
Sbjct: 561 ATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAI 620
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIR 199
A +GAI+PL+ L+ G+ AKEN+A L LS EE+K IG+SGAI LV LL G R
Sbjct: 621 ADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPR 680
Query: 200 GKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXX 259
GKKDA+TAL++L +ENK V++G ++ L++LM D + MVD
Sbjct: 681 GKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGR 739
Query: 260 XXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQN 319
S R KE A LLQL + + MV +EGA+PPLVAL+Q+
Sbjct: 740 NAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQS 799
Query: 320 GTNRAKQKAEKLIELLRQPRSGS 342
GT RA++KA+ L+ R R G+
Sbjct: 800 GTPRAREKAQALLSYFRNQRHGN 822
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 146/263 (55%), Gaps = 1/263 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
A E+RLLAK+ +NRI I +GAI E VTA+LNLS+ D NK+ I
Sbjct: 564 ATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAI 623
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIR 199
A +GAI+PL+ L+ G+ AKEN+A L LS EE+K IG+SGAI LV LL G R
Sbjct: 624 ADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPR 683
Query: 200 GKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXX 259
GKKDA+TAL++L +ENK V++G ++ L++LM D + MVD
Sbjct: 684 GKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGR 742
Query: 260 XXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQN 319
S R KE A LLQL + + MV +EGA+PPLVAL+Q+
Sbjct: 743 NAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQS 802
Query: 320 GTNRAKQKAEKLIELLRQPRSGS 342
GT RA++KA+ L+ R R G+
Sbjct: 803 GTPRAREKAQALLSYFRNQRHGN 825
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 144/262 (54%), Gaps = 2/262 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
AA EIR L N ENR+ I + GAI P E+ VTA+LNLS+ + NK +I
Sbjct: 456 AAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMI 515
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSG-AIPLLVSLLQTGGI 198
GAI+PLV L G AKEN+A +L LS + ++ IG+S AI LV+LL G
Sbjct: 516 VEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTF 575
Query: 199 RGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXX 258
RGKKDA++AL++L +NK R V+A +K LVEL+ D + MVD
Sbjct: 576 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEG 634
Query: 259 XXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQ 318
SQR KE A +LLQLC + + T+V +EGAIPPLVAL+Q
Sbjct: 635 RQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQ 694
Query: 319 NGTNRAKQKAEKLIELLRQPRS 340
+GT RAK+KA++L+ R R
Sbjct: 695 SGTQRAKEKAQQLLSHFRNQRD 716
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 144/262 (54%), Gaps = 2/262 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
AA EIR L N ENR+ I + GAI P E+ VTA+LNLS+ + NK +I
Sbjct: 492 AAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMI 551
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSG-AIPLLVSLLQTGGI 198
GAI+PLV L G AKEN+A +L LS + ++ IG+S AI LV+LL G
Sbjct: 552 VEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTF 611
Query: 199 RGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXX 258
RGKKDA++AL++L +NK R V+A +K LVEL+ D + MVD
Sbjct: 612 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEG 670
Query: 259 XXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQ 318
SQR KE A +LLQLC + + T+V +EGAIPPLVAL+Q
Sbjct: 671 RQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQ 730
Query: 319 NGTNRAKQKAEKLIELLRQPRS 340
+GT RAK+KA++L+ R R
Sbjct: 731 SGTQRAKEKAQQLLSHFRNQRD 752
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 144/260 (55%), Gaps = 2/260 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXX-XXXXXEYGVTAILNLSLCDENKEL 138
A EIR L+K +NRI IA+AGAI E VT ILNLS+ + NKEL
Sbjct: 361 AVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKEL 420
Query: 139 IASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGI 198
I +GA+ +V L+AG+ A+ENAA L LS A+E+K IG SGAI LV LLQ G +
Sbjct: 421 IMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSV 480
Query: 199 RGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESN-MVDXXXXXXXXXXXXXX 257
RGKKDA+TAL++LC + NK RAV+AGI+K LV+++ D S M D
Sbjct: 481 RGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQV 540
Query: 258 XXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALT 317
R +E A ILL LC+ + + R GA+ PL+ L+
Sbjct: 541 AKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELS 600
Query: 318 QNGTNRAKQKAEKLIELLRQ 337
++GT RAK+KA L+ELLR+
Sbjct: 601 RDGTERAKRKANSLLELLRK 620
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 144/260 (55%), Gaps = 2/260 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXX-XXXXXEYGVTAILNLSLCDENKEL 138
A EIR L+K +NRI IA+AGAI E VT ILNLS+ + NKEL
Sbjct: 213 AVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKEL 272
Query: 139 IASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGI 198
I +GA+ +V L+AG+ A+ENAA L LS A+E+K IG SGAI LV LLQ G +
Sbjct: 273 IMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSV 332
Query: 199 RGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESN-MVDXXXXXXXXXXXXXX 257
RGKKDA+TAL++LC + NK RAV+AGI+K LV+++ D S M D
Sbjct: 333 RGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQV 392
Query: 258 XXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALT 317
R +E A ILL LC+ + + R GA+ PL+ L+
Sbjct: 393 AKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELS 452
Query: 318 QNGTNRAKQKAEKLIELLRQ 337
++GT RAK+KA L+ELLR+
Sbjct: 453 RDGTERAKRKANSLLELLRK 472
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 137/254 (53%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
AA EIRLLAK +NR+ IA+AGAI E+ VTA+LNLS+C+ NK I
Sbjct: 372 AAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAI 431
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIR 199
S+GAI +V+ LK G+ A+ENAA L LS +E+K IG GAIP LV LL G R
Sbjct: 432 VSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQR 491
Query: 200 GKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXX 259
GKKDA+TAL++LC + NK +A++AG++ L L+ + S MVD
Sbjct: 492 GKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGK 551
Query: 260 XXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQN 319
S R +E A +L+ LC + + + G + PL+ L N
Sbjct: 552 AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGN 611
Query: 320 GTNRAKQKAEKLIE 333
GT+R K+KA +L+E
Sbjct: 612 GTDRGKRKAAQLLE 625
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 135/261 (51%), Gaps = 2/261 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
A IR+LA+N +NRI IA+ AI VT +LNLS+ D NK LI
Sbjct: 441 ATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLI 500
Query: 140 ASSGAIKPLVRALKAGT-PTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGI 198
A SGAI PL+ LK G AK N+A L LS EE K IG +GAI LV LL +G +
Sbjct: 501 AESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSL 560
Query: 199 RGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXX 258
GKKDA+TAL++L ENK + ++AG ++ LVELM D MV+
Sbjct: 561 SGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREG 619
Query: 259 XXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQ 318
S R KE A LLQLC + + V REG IPPLVALT+
Sbjct: 620 KIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTK 679
Query: 319 NGTNRAKQKAEKLIELLRQPR 339
+GT R K+KA+ L++ + R
Sbjct: 680 SGTARGKEKAQNLLKYFKAHR 700
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 93 ENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELIASSGAIKPLVRAL 152
EN+ K+ +AGA++ E V + NL+ E K I G I LV +
Sbjct: 578 ENKTKVIEAGAVR-YLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVV 636
Query: 153 KAGTPTAKENAACALLRL-SQAEESKAAIGRSGAIPLLVSLLQTGGIRGKKDASTALYSL 211
+ G+ KENA ALL+L + + + + R G IP LV+L ++G RGK+ A L
Sbjct: 637 ELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYF 696
Query: 212 CSVRENKIR 220
+ R++ R
Sbjct: 697 KAHRQSNQR 705
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 141/256 (55%), Gaps = 4/256 (1%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXX--XXXXXXXXXEYGVTAILNLSLCDENK- 136
AA EIRLLAK NR+ IA +GAI P E+ VT+ILNLS+C ENK
Sbjct: 375 AAGEIRLLAKQNNHNRVAIAASGAI-PLLVNLLTISNDSRTQEHAVTSILNLSICQENKG 433
Query: 137 ELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTG 196
+++ SSGA+ +V L+ G+ A+ENAA L LS +E+K IG +GAIP LV+LL G
Sbjct: 434 KIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEG 493
Query: 197 GIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXX 256
RGKKDA+TAL++LC + NK +AV+AG++ VL+ L+ + ES MVD
Sbjct: 494 SQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHP 553
Query: 257 XXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVAL 316
S R KE + +L+ LC N + + G + L+ +
Sbjct: 554 DGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEM 613
Query: 317 TQNGTNRAKQKAEKLI 332
+NGT+R K+KA +L+
Sbjct: 614 AENGTDRGKRKAAQLL 629
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 142/259 (54%), Gaps = 2/259 (0%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
AA E+RLLAK +NR+ IA+AGAI E+ VTA+LNLS+ + NK I
Sbjct: 365 AAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAI 424
Query: 140 ASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIR 199
+GAI +V LK G+ A+ENAA L LS +E+K AIG +GAI L+SLL+ G R
Sbjct: 425 VDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRR 484
Query: 200 GKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXX 259
GKKDA+TA+++LC + NK RAVK GI+ L L+ D MVD
Sbjct: 485 GKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGK 544
Query: 260 XXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVARE-GAIPPLVALTQ 318
S R +E A IL LC N+ R VARE GA L LT+
Sbjct: 545 TAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIE-RLNVAREVGADVALKELTE 603
Query: 319 NGTNRAKQKAEKLIELLRQ 337
NGT+RAK+KA L+EL++Q
Sbjct: 604 NGTDRAKRKAASLLELIQQ 622
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 133/253 (52%)
Query: 83 EIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELIASS 142
++RLLA+ PENR+ IA AGAI E VT +LNLS+ + NK+LI++
Sbjct: 402 QMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNE 461
Query: 143 GAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTGGIRGKK 202
GAI ++ L+ G A+EN+A AL LS +E+K IG S IP LV LLQ G +RGKK
Sbjct: 462 GAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKK 521
Query: 203 DASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXXXXXXXX 262
DA TAL++L NK RA+ AGI++ L+ L+ D M+D
Sbjct: 522 DALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAI 581
Query: 263 XXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVALTQNGTN 322
+ + KE A +LL+L N ++ + G LV +T +GTN
Sbjct: 582 GQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTN 641
Query: 323 RAKQKAEKLIELL 335
RA++KA LI+L+
Sbjct: 642 RAQRKANALIQLI 654
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 3/215 (1%)
Query: 125 AILNLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSG 184
+++NLSL +NK I SG + L+ LK+GT A+E+ A AL L+ +E+K IG G
Sbjct: 299 SVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLG 358
Query: 185 AI-PLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM--ADFESNM 241
A+ PLL +L + R ++DA+ ALY L + N+ R V+AG + L+ ++ D S +
Sbjct: 359 AVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRI 418
Query: 242 VDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYR 301
+ S+ +E V +LL LC+ N+ +R
Sbjct: 419 LLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFR 478
Query: 302 TMVAREGAIPPLVALTQNGTNRAKQKAEKLIELLR 336
+ + GA L+ + +NG R K+KA K++ +R
Sbjct: 479 GLASEAGAEEVLMEVEENGNERVKEKASKILLAMR 513
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
AA EIRLLAK ENR IA+AGAI E VTA+LNLS+ ++NK I
Sbjct: 426 AAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRI 485
Query: 140 ASSG-AIKPLVRALKAG-TPTAKENAACALLRLSQAEESKAAIG-RSGAIPLLVSLLQTG 196
G ++ +V L +G T A+ENAA L LS E K I + L LLQ G
Sbjct: 486 MEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNG 545
Query: 197 GIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLV 231
RGKKDA TALY+L + +N R ++ G + LV
Sbjct: 546 TPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLV 580
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 123 VTAILNLSLCDE-NKELIASSGAIKPL-VRALKAGTPTAKENAACALLRLSQAEESKAAI 180
VT +LN+S+ D+ NK+L+ + + PL + AL+ GT + NAA A+ LS + +K I
Sbjct: 101 VTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLI 160
Query: 181 GRSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESN 240
G+SG + L+ LL+ G KD + A+++LC EN+ RAV+ G ++VL + +++
Sbjct: 161 GKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISN--GL 218
Query: 241 MVDXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVT 299
VD +R KE A+VIL +C + T
Sbjct: 219 YVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRT 278
Query: 300 -YRTMVAREGAIPPLVALTQNGTNRAKQKAEKLIELLRQ 337
++ + E A + L++ GT+RA++KA +++ LR+
Sbjct: 279 KWKEIKEEENAHGTITKLSREGTSRAQRKANGILDRLRK 317
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 123 VTAILNLSLCDE-NKELIASSGAIKPL-VRALKAGTPTAKENAACALLRLSQAEESKAAI 180
VT +LN+S+ D+ NK+L+ + + PL + AL+ GT + NAA A+ LS + +K I
Sbjct: 101 VTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLI 160
Query: 181 GRSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESN 240
G+SG + L+ LL+ G KD + A+++LC EN+ RAV+ G ++VL + +++
Sbjct: 161 GKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISN--GL 218
Query: 241 MVDXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVT 299
VD +R KE A+VIL +C + T
Sbjct: 219 YVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRT 278
Query: 300 -YRTMVAREGAIPPLVALTQNGTNRAKQKAEKLIELLRQ 337
++ + E A + L++ GT+RA++KA +++ LR+
Sbjct: 279 KWKEIKEEENAHGTITKLSREGTSRAQRKANGILDRLRK 317
>AT4G12710.1 | Symbols: | ARM repeat superfamily protein |
chr4:7485040-7486733 REVERSE LENGTH=402
Length = 402
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 80 AAMEIRLLAKNKP---ENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDE-N 135
AA EIR L + P R K+A AG I P + A+LNL++ +E N
Sbjct: 65 AAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERN 124
Query: 136 KELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQT 195
K I +GA+ PL++ LK + +E A A+L LS A +KA I SG PLL+ +L +
Sbjct: 125 KIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSS 184
Query: 196 GGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADF--ESNMVDXXXXXXXXXX 253
G ++GK DA TAL++L + +E + A + L+ L+ + S +
Sbjct: 185 GTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMIL 244
Query: 254 XXXXX--XXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVT-YRTMVAREGAI 310
S E AV LL LC + YR ++ +EGAI
Sbjct: 245 SHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAI 304
Query: 311 PPLVALTQNGTNRAKQKAEKLIELLRQ-PR 339
P L++ T +GT++++ +A L++LLR+ PR
Sbjct: 305 PGLLSSTVDGTSKSRDRARVLLDLLRETPR 334
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
Query: 120 EYGVTAILNLSLCDE-NKELIASSGAIKPL-VRALKAGTPTAKENAACALLRLSQAEESK 177
E VT +LN+S+ D+ NK+L+ + + PL + AL+ GT + NAA A+ LS + +K
Sbjct: 233 EDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNK 292
Query: 178 AAIGRSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADF 237
IG+SG + L+ LL+ G KD + A+++LC EN+ RAV+ G ++VL + +++
Sbjct: 293 VLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISN- 351
Query: 238 ESNMVDXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEE 296
VD +R KE A+VIL +C
Sbjct: 352 -GLYVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFS 410
Query: 297 NVT-YRTMVAREGAIPPLVALTQNGTNRAKQKAEKLIELLRQ 337
+ T ++ + E A + L++ GT+RA++KA +++ LR+
Sbjct: 411 DRTKWKEIKEEENAHGTITKLSREGTSRAQRKANGILDRLRK 452
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 84 IRLLAKNKPENRIKIAKAGAIKPXX----XXXXXXXXXXXEYGVTAILNLSLCDE-NKEL 138
IRLL K+ E RI + G ++ + G A+ NL++ + NKEL
Sbjct: 448 IRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKEL 507
Query: 139 IASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTG-G 197
+ +SG I+ L + + + + +A L LS +E+K+ IG S A+P LV LLQ
Sbjct: 508 MLTSGVIRLLEKMISSAE--SHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIE 565
Query: 198 IRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMV--DXXXXXXXXXXXX 255
+ K DA ALY+L + N + + I+K L L+A N+
Sbjct: 566 TQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQ 625
Query: 256 XXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVA 315
++E AV LL LC + MV +EG IP LV+
Sbjct: 626 EGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVS 685
Query: 316 LTQNGTNRAKQKAEKLIELLRQPR 339
++ NGT R ++K++KL+ L R+ R
Sbjct: 686 ISVNGTPRGREKSQKLLMLFREER 709
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 84 IRLLAKNKPENRIKIAKAGAIKPXX----XXXXXXXXXXXEYGVTAILNLSLCDE-NKEL 138
IRLL K+ E RI + G ++ + G A+ NL++ + NKEL
Sbjct: 448 IRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKEL 507
Query: 139 IASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQTG-G 197
+ +SG I+ L + + + + +A L LS +E+K+ IG S A+P LV LLQ
Sbjct: 508 MLTSGVIRLLEKMISSAE--SHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIE 565
Query: 198 IRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMV--DXXXXXXXXXXXX 255
+ K DA ALY+L + N + + I+K L L+A N+
Sbjct: 566 TQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQ 625
Query: 256 XXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVA 315
++E AV LL LC + MV +EG IP LV+
Sbjct: 626 EGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVS 685
Query: 316 LTQNGTNRAKQKAEKLIELLRQPR 339
++ NGT R ++K++KL+ L R+ R
Sbjct: 686 ISVNGTPRGREKSQKLLMLFREER 709
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 83 EIRLLAKNKPENRIKIAKAGAIKPXX----XXXXXXXXXXXEYGVTAILNLSLCDE-NKE 137
+IR+L K+ E RI + + G ++ + G A+ NL++ + NKE
Sbjct: 445 QIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKE 504
Query: 138 LIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQT-G 196
L+ +SG I PL+ + P + + L LS EE+K IG S A+P +V+LL T
Sbjct: 505 LMLASGII-PLLEEMLCN-PHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTET 562
Query: 197 GIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXXXXXX 256
++ K DA +L+ L + N + A ++ L L E +
Sbjct: 563 EVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNE 622
Query: 257 XXXXXXXXXXXXXXXXXXXXXXSQ-RQKEIAVVILLQLCEENVTYRTMVAREGAIPPLVA 315
+ ++E AV +LL LC + MV +EG IP LV+
Sbjct: 623 AGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVS 682
Query: 316 LTQNGTNRAKQKAEKLIELLRQPR 339
++ NGT R +++A+KL+ L R+ R
Sbjct: 683 ISVNGTQRGRERAQKLLTLFRELR 706
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 133 DENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSL 192
++NK I +GA++P++ L++ +PT +E A+ +LL LS + +K IG +G +PLLV +
Sbjct: 137 EKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVKV 196
Query: 193 LQTGGIRGKKDASTALYSLCSVRE--NKIRAVK--AGIMKVLVELMADFESNMVDXXXXX 248
++ G + K DA AL +L ++ + + I A K + I+ +L +++
Sbjct: 197 IKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLIE 256
Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVT-YRTMVARE 307
S + +E AV +LL LC+ + + YR + RE
Sbjct: 257 ALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRSKYREPILRE 316
Query: 308 GAIPPLVALTQNGTNRAKQKAEKLIELLRQ---PRS 340
G IP L+ LT GT++++ KA++L+ LLR PRS
Sbjct: 317 GVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRS 352
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 93 ENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELIASSGAIKPLVRAL 152
+N++ I +AGA++P EY ++L LS NK +I ++G + LV+ +
Sbjct: 138 KNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVKVI 197
Query: 153 KAGTPTAKENAACALLRLSQAEESKAAI 180
K G+P AK +A AL LS ++ + I
Sbjct: 198 KHGSPQAKADAVMALSNLSTLPDNLSMI 225
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 123 VTAILNLSLCDENKELIASSGAIKPLV-RALKAGTPTAKENAACALLRLSQAEESKAAIG 181
VTA+ NLS+ + NK +IA + + PL+ ++LK GT + NAA L LS + +K IG
Sbjct: 231 VTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIG 290
Query: 182 RSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMK 228
S A+ L+ L++ G + K+A++ +++LC V ENK + V AG++
Sbjct: 291 NSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIH 337
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 87 LAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELIASSGAIK 146
L K R K+ ++GA++ E ++ +LNLSL D+NK + + G I+
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIR 180
Query: 147 PLVRALKAGTPTAKENAACALLRLSQAEESKAAIGR-SGAIPLLVSLLQTGGIRGKKDAS 205
+V L+ G+P K AA L L+ E +KA IG AI LVSLL+ G R +K+++
Sbjct: 181 RIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESA 240
Query: 206 TALYSLCSVRENKIRAVKAGIMKVLVE 232
TALY+LCS +N+ R V G + +LVE
Sbjct: 241 TALYALCSFPDNRKRVVDCGSVPILVE 267
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 125 AILNLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSG 184
+I+NLSL NK I SG + L+ LK+G+ A+E+ AL L+ EE+K IG G
Sbjct: 248 SIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLG 307
Query: 185 AI-PLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFES 239
A+ PLL +L + R ++DA+ ALY L + N+ R VKAG + +++ ++ ES
Sbjct: 308 AVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGES 363
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 120 EYGVTAIL-NLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKA 178
+ VTA+L NLSL NK I SG + PL+ LK G+ A+E++A + L+ +E+K
Sbjct: 287 QVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKT 346
Query: 179 AIGRSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFE 238
AIG G + L+ L++ G + D++ ALY L V+ N+ + VK G +++L+ +++ +
Sbjct: 347 AIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQ 406
Query: 239 S-NMVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEE- 296
V ++ +E V +L L +
Sbjct: 407 MIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDG 466
Query: 297 NVTYRTMVAREGAIPPLVALTQNGTNRAKQKAEKLIELLR 336
+ ++ + A+ LV + ++G RAKQKA +++E+LR
Sbjct: 467 GLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLR 506
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 82 MEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENK-ELIA 140
E+R LAK+ R IA+AGAI VT ILNLS+ ++NK ++
Sbjct: 389 FELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIME 448
Query: 141 SSGAIKPLVRALKAG-TPTAKENAACALLRLSQAEESKAAIGRSG-AIPLLVSLLQTGGI 198
+ GA+ ++ L++G T AK NAA L L+ + +GR + LV L + G
Sbjct: 449 TDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPT 508
Query: 199 RGKKDASTALYSLCSVRENKIRAVKAGIM 227
K+DA A+ +L + REN R V+AG+M
Sbjct: 509 SSKRDALVAILNLVAERENVGRFVEAGVM 537
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYG-VTAILNLSL-CDENKE 137
AA E+RLLAK E R+ +A GAI P + + A+LNL + D NK
Sbjct: 163 AASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDANKA 222
Query: 138 LIASSGAIKPLVRALKA-GTPTAK--ENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQ 194
I +GA+ +++ +++ TP + E L LS + +K IG SGAI LV LQ
Sbjct: 223 AIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQ 282
Query: 195 ----TGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFE 238
T + ++DA ALY+L + N ++ ++ L+ + D E
Sbjct: 283 NLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDME 330
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYG-VTAILNLSL-CDENKE 137
AA E+RLLAK E R+ +A GAI P + + A+LNL + D NK
Sbjct: 163 AASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDANKA 222
Query: 138 LIASSGAIKPLVRALKA-GTPTAK--ENAACALLRLSQAEESKAAIGRSGAIPLLVSLLQ 194
I +GA+ +++ +++ TP + E L LS + +K IG SGAI LV LQ
Sbjct: 223 AIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQ 282
Query: 195 ----TGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFE 238
T + ++DA ALY+L + N ++ ++ L+ + D E
Sbjct: 283 NLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDME 330
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
Query: 122 GVTAILNLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIG 181
+ +++NLSL +NK I G + L+ LK+G+ A+E+AA + LS +++K IG
Sbjct: 286 ALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIG 345
Query: 182 RSGAI-PLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFES- 239
GA+ PLL +L R + D++ ALY L + N+ + V+ G + L ++ ES
Sbjct: 346 VLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESA 405
Query: 240 --------NMVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILL 291
N+ S +E V L
Sbjct: 406 SRALLVICNLA-CCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALF 464
Query: 292 QLCEENVTYRTMVAREGAIPPLVALTQNGTNRAKQKAEKLIELLRQ 337
L E++ ++ + A+ L + + GT RA++KA+K+++L+R+
Sbjct: 465 ALSHESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQLMRE 510
>AT2G25130.1 | Symbols: | ARM repeat superfamily protein |
chr2:10695243-10696959 REVERSE LENGTH=468
Length = 468
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 10/264 (3%)
Query: 83 EIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEY--GVTAILNLSL-CDENKELI 139
E+RLLAK+ E R+ +A GAI P + A+LNL + D NK I
Sbjct: 132 EVRLLAKDDIEARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGNDVNKAAI 191
Query: 140 ASSGAIKPLVRALKAGTPTAK---ENAACALLRLSQAEESKAAIGRSGAIPLLVSLL--- 193
+G + +++ +++ P + E L LS + +K IG SGAI LV L
Sbjct: 192 VKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNF 251
Query: 194 -QTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNMVDXXXXXXXXX 252
+T + ++DA ALY+L +N ++ ++ L+ + D E +
Sbjct: 252 EETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNVVS 311
Query: 253 XXXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEENVTYRTMVAREGAIPP 312
S + +E AV IL+ + + R + G
Sbjct: 312 VPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEAGIESS 371
Query: 313 LVALTQNGTNRAKQKAEKLIELLR 336
L+ LT G+ A+++A +++E LR
Sbjct: 372 LLELTLVGSPLAQKRASRVLECLR 395
>AT1G77460.2 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:29104378-29111580 FORWARD LENGTH=2136
Length = 2136
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 133 DENKELIASSGAIKPLVRALKAGTPTAKENAACALLRL-SQAEESKAAIGRSGAIPLLVS 191
D++K + ++G I PLV+ L+ G+ AKE+AAC L L +EE + + R+G IP +
Sbjct: 503 DDSKWAVTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFLW 562
Query: 192 LLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMAD 236
LL+TGG ++ ++ L L A A I ++L L+ D
Sbjct: 563 LLKTGGPNSQETSAKTLVKLVHT------ADPATINQLLALLLGD 601
>AT1G77460.1 | Symbols: | Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein |
chr1:29104378-29111580 FORWARD LENGTH=2136
Length = 2136
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 133 DENKELIASSGAIKPLVRALKAGTPTAKENAACALLRL-SQAEESKAAIGRSGAIPLLVS 191
D++K + ++G I PLV+ L+ G+ AKE+AAC L L +EE + + R+G IP +
Sbjct: 503 DDSKWAVTAAGGIPPLVQLLETGSQKAKEDAACILWNLCCHSEEIRDCVERAGGIPAFLW 562
Query: 192 LLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMAD 236
LL+TGG ++ ++ L L A A I ++L L+ D
Sbjct: 563 LLKTGGPNSQETSAKTLVKLVHT------ADPATINQLLALLLGD 601
>AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 |
chr2:18511719-18515762 REVERSE LENGTH=930
Length = 930
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 125 AILNLSLCDENKELIASSGAIKPLV---RALKAGTPTAKENAACALLRLSQAEESKAAIG 181
A+ NLS D+N+E I+ +G ++ LV ++ + +E AA AL LS +E + AIG
Sbjct: 633 ALWNLSFDDKNRESISVAGGVEALVALAQSCSNASTGLQERAAGALWGLSVSEANSVAIG 692
Query: 182 RSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNM 241
R G +P L++L ++ + A+ AL++L N +R V+ G + LV L + S M
Sbjct: 693 REGGVPPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSSSVSKM 752
>AT3G60350.1 | Symbols: ARABIDILLO-2, ARABIDILLO2 | ARABIDILLO-2 |
chr3:22306806-22310596 REVERSE LENGTH=928
Length = 928
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 125 AILNLSLCDENKELIASSGAIKPLVRALKAGTPTA---KENAACALLRLSQAEESKAAIG 181
A+ NL+ D+N+E IA+ G ++ LV K+ + + +E A AL LS +E + AIG
Sbjct: 624 ALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQERVAGALWGLSVSEANSIAIG 683
Query: 182 RSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELMADFESNM 241
G IP L++L+++ + A+ AL++L N +R V+ G + LV+L + S M
Sbjct: 684 HEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIVEEGGVVALVQLCSSSVSKM 743
>AT5G14510.1 | Symbols: | ARM repeat superfamily protein |
chr5:4678125-4679194 REVERSE LENGTH=327
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 11/264 (4%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDE-NKEL 138
AA+E+ L++ + R K+A+ I P E ++A+L+L+ E NK
Sbjct: 20 AAIELTNLSRKQ---RQKLAEREIISPLLSMLQSQDCITTEVALSALLSLAFGSERNKVR 76
Query: 139 IASSGAIKPLVRALKAGTP-TAKENAACALLRLSQAEESKAAIGRSGAIPLLVSL--LQT 195
I SGA+ L+ L++ T E A LL LS ++K + + + LLV L L
Sbjct: 77 IVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMASTRLVQLLVGLIGLDR 136
Query: 196 GGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM--ADFESNMVDXXXXXXXXXX 253
I+ K D L +L ++ + + +G L++++ D S + D
Sbjct: 137 LTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDKSSELADKAVALLENII 196
Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXSQRQKEIAVVILLQLCEEN-VTYRTMVAREGAIPP 312
+Q KE AV ILL +C + T R M+ REG +P
Sbjct: 197 SHSPESVSSIGGAIGVLVEAIEEGSAQ-CKEHAVGILLGICNNDRETNRGMILREGVMPG 255
Query: 313 LVALTQNGTNRAKQKAEKLIELLR 336
L+ ++ +GT RAK+ A +L+ LLR
Sbjct: 256 LLQVSVDGTRRAKEMARELLLLLR 279
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 80 AAMEIRLLAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDENKELI 139
A EIR+ K NR + KAGA+ P E + ILNLS K I
Sbjct: 408 AVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKI 467
Query: 140 ASSGAIKPLVRALKAGTPT-AKENAACALLRLSQAEESKAAIGRS-GAIPLLVSLLQTG- 196
A G +K LV L G T + +A AL LS E+ IG + AIP L+++++
Sbjct: 468 AGEG-LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDD 526
Query: 197 -GIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
G K+ A A+ L +N R + AG + +L++L+
Sbjct: 527 YGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLL 565
>AT5G13060.1 | Symbols: ABAP1 | ARMADILLO BTB protein 1 |
chr5:4142958-4146952 FORWARD LENGTH=737
Length = 737
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 87 LAKNKPENRIKIAKAGAIKPXXXXXXXXXXXXXEYGVTAILNLSLCDEN-KELIASSGAI 145
L + P+ + ++ +AGA++P I + D + K IA GAI
Sbjct: 294 LVHSSPDIKKEVIRAGALQPVIGLLSSTCLETQREAALLIGQFAAPDSDCKVHIAQRGAI 353
Query: 146 KPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVSLL--QTGGIRGKKD 203
PL++ L++ E +A AL RL+Q ++A I G I L++LL +TG + + +
Sbjct: 354 TPLIKMLESSDEQVVEMSAFALGRLAQDAHNQAGIAHRGGIISLLNLLDVKTGSV--QHN 411
Query: 204 ASTALYSLCSVRENKIRAVKAG 225
A+ ALY L EN +KAG
Sbjct: 412 AAFALYGLADNEENVADFIKAG 433
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 123 VTAILNLSLCDENKELIASSGAIKPLV-RALKAGTPTAKENAACALLRLSQAEESKAAIG 181
VTA+ N+S ++NK ++A + + PL+ +++K G+ + NA L LS + +K IG
Sbjct: 237 VTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIG 296
Query: 182 RSGAIPLLVSLL-QTGGIRGKKDASTALYSL-CSVRENKIRAVKAGI 226
S A+ L+ L+ + + DA A+ L C REN +A+ G+
Sbjct: 297 NSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGL 343
>AT1G01830.1 | Symbols: | ARM repeat superfamily protein |
chr1:298717-300441 REVERSE LENGTH=574
Length = 574
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 132 CDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVS 191
CDE + S G + PLVR +++G+ KE AA A+ RLS EE+ I G I L+
Sbjct: 243 CDE---WLISEGVLPPLVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLID 299
Query: 192 LLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
L +TG + ++ AL ++ +V E + + GI++V ++L+
Sbjct: 300 LCKTGDSVSQAASAAALKNMSAVSELRQLLAEEGIIRVSIDLL 342
>AT1G01830.3 | Symbols: | ARM repeat superfamily protein |
chr1:298717-300441 REVERSE LENGTH=574
Length = 574
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 132 CDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVS 191
CDE + S G + PLVR +++G+ KE AA A+ RLS EE+ I G I L+
Sbjct: 243 CDE---WLISEGVLPPLVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLID 299
Query: 192 LLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
L +TG + ++ AL ++ +V E + + GI++V ++L+
Sbjct: 300 LCKTGDSVSQAASAAALKNMSAVSELRQLLAEEGIIRVSIDLL 342
>AT1G01830.2 | Symbols: | ARM repeat superfamily protein |
chr1:298717-300441 REVERSE LENGTH=574
Length = 574
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 132 CDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPLLVS 191
CDE + S G + PLVR +++G+ KE AA A+ RLS EE+ I G I L+
Sbjct: 243 CDE---WLISEGVLPPLVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLID 299
Query: 192 LLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
L +TG + ++ AL ++ +V E + + GI++V ++L+
Sbjct: 300 LCKTGDSVSQAASAAALKNMSAVSELRQLLAEEGIIRVSIDLL 342
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 123 VTAILNLSLCDENKELIASSGAIKPLV-RALKAGTPTAKENAACALLRLSQAEESKAAIG 181
VTA+ S ++NK L+A + + PL+ + +K GT + ++A + LS + +K IG
Sbjct: 220 VTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIG 279
Query: 182 RSGAIPLLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMK 228
S + L+ +++ G +A +AL +LC V+E +AV G+++
Sbjct: 280 NSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIR 326
>AT3G20170.1 | Symbols: | ARM repeat superfamily protein |
chr3:7041780-7043207 FORWARD LENGTH=475
Length = 475
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 129 LSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIPL 188
L++ + N LIA + LVR L+AG AK A+ L L+ S + I SGAIPL
Sbjct: 302 LAVAEGNAVLIA-----EQLVRILRAGDNEAKLAASDVLWDLAGYRHSVSVIRGSGAIPL 356
Query: 189 LVSLLQTGGIRGKKDASTALYSLCSVRENKIRAV-KAGIMKVLVELMAD 236
L+ LL+ G + ++ S A+ L S EN A +G++ +L+E + D
Sbjct: 357 LIELLRDGSLEFRERISGAISQL-SYNENDREAFSDSGMIPILIEWLGD 404
>AT2G22125.1 | Symbols: CSI1 | binding | chr2:9406793-9414223
FORWARD LENGTH=2150
Length = 2150
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 133 DENKELIASSGAIKPLVRALKAGTPTAKENAACALLRL-SQAEESKAAIGRSGAIPLLVS 191
DE+K I ++G I PLV+ L+ G+ A+E++A L L + +E+ +A + + A+P L+
Sbjct: 525 DESKWAITAAGGIPPLVQILETGSAKAREDSATILRNLCNHSEDIRACVESADAVPALLW 584
Query: 192 LLQTGGIRGKKDASTALYSL 211
LL+ G GK+ A+ L L
Sbjct: 585 LLKNGSPNGKEIAAKTLNHL 604
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 128 NLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIP 187
NL C EN + +A SG ++PL+ L G+ + A L+ + E K + A P
Sbjct: 478 NLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGHEKKTYVAEK-ACP 536
Query: 188 LLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
L+ L+Q+ I ++ A AL + N V+ GI+K++VE M
Sbjct: 537 ALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEM 583
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 128 NLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIP 187
NL C EN + +A SG ++PL+ L G+ + A L+ + E K + A P
Sbjct: 478 NLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGHEKKTYVAEK-ACP 536
Query: 188 LLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
L+ L+Q+ I ++ A AL + N V+ GI+K++VE M
Sbjct: 537 ALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEM 583
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 128 NLSLCDENKELIASSGAIKPLVRALKAGTPTAKENAACALLRLSQAEESKAAIGRSGAIP 187
NL C EN + +A SG ++PL+ L G+ + A L+ + E K + A P
Sbjct: 478 NLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGHEKKTYVAEK-ACP 536
Query: 188 LLVSLLQTGGIRGKKDASTALYSLCSVRENKIRAVKAGIMKVLVELM 234
L+ L+Q+ I ++ A AL + N V+ GI+K++VE M
Sbjct: 537 ALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEM 583