Miyakogusa Predicted Gene

Lj5g3v0308840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0308840.2 CUFF.52825.2
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion ...   172   2e-43
AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2...   157   3e-39
AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion ...   141   3e-34
AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion ...   120   8e-28
AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3...   119   2e-27
AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion ...   119   2e-27
AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion ...    64   5e-11

>AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion
           channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276
          Length = 276

 Score =  172 bits (435), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  F+DI K+ +D+L +DYNSD                   +K  G+ +  VA  +K+ 
Sbjct: 4   GPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVALTSTALKKGGVHAADVATQYKYK 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N     K+DTDS+VLTT T+  ++PSTK +AS ++P Y+S K+ VQY H H  +T A  L
Sbjct: 64  NALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVPDYNSAKLEVQYFHDHATVTAAAAL 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
            ++P +D +AT+G+P I+FGAE  Y T++  FTKYNAG+    P +  S+IL DKGDS+K
Sbjct: 124 KQNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGDSLK 183

Query: 188 VSYLRELERLNGGAIVG 204
            SYL   +     A VG
Sbjct: 184 ASYLHHFDEFKRTAAVG 200


>AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2 |
           chr5:26935223-26937123 FORWARD LENGTH=303
          Length = 303

 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 118/224 (52%), Gaps = 27/224 (12%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXX---------------------------XXX 40
           GP  F+DI K+ +D+L +DYNSD                                     
Sbjct: 4   GPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVGTERENEYQDDIYFCLRTRCLIMS 63

Query: 41  XXXXXXXXXVKSRGLSSGAVAAAFKHNNKTLHFKLDTDSTVLTTFTIANVVPSTKTVASI 100
                    +K  G+ +  VA  +K+ N     K+DTDS+VLTT T+  ++PSTK +AS 
Sbjct: 64  ENEALTSTALKKGGVHAADVATQYKYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASF 123

Query: 101 RLPYYDSGKIAVQYLHHHVALTGAVGLNRSPDVDFSATIGTPSIAFGAETSYSTSAGKFT 160
           ++P Y+S K+ VQY H H  +T A  L ++P +D +AT+G+P I+FGAE  Y T++  FT
Sbjct: 124 KVPDYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSKTFT 183

Query: 161 KYNAGLCFQMPSSNASVILADKGDSMKVSYLRELERLNGGAIVG 204
           KYNAG+    P +  S+IL DKGDS+K SYL   +     A VG
Sbjct: 184 KYNAGISVTKPDACLSIILGDKGDSLKASYLHHFDEFKRTAAVG 227


>AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion
           channel 4 | chr5:23283895-23285335 REVERSE LENGTH=274
          Length = 274

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 108/183 (59%)

Query: 9   PVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHNN 68
           P PF+DI K+ +D+LNKDY  DH                  +K      G ++  +K  N
Sbjct: 5   PAPFADIGKKAKDLLNKDYIFDHKFTLTMLSATGTEFVATGLKKDDFFFGDISTLYKGQN 64

Query: 69  KTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGLN 128
             +  K+D+ S+V T  T+ N++PS K V S ++P + SGK+ VQY+H H  L  ++GLN
Sbjct: 65  TIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPDHKSGKLDVQYVHPHATLNSSIGLN 124

Query: 129 RSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMKV 188
            +P +D SATIG+ ++  G E S+ T++   TKYNAG+ F     +A++IL DKG+S++ 
Sbjct: 125 PTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAALILEDKGESLRA 184

Query: 189 SYL 191
           +Y+
Sbjct: 185 TYV 187


>AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion
           channel 1 | chr3:85754-87612 FORWARD LENGTH=276
          Length = 276

 Score =  120 bits (300), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 99/183 (54%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +++I K+ RD+L KD+NSD                    K   L  G VA   +  
Sbjct: 4   GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N T   K+ TDST L T T+    P  +++ S ++P  +SGK+ +QYLH +  ++ ++GL
Sbjct: 64  NITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGL 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
            ++P V+FS  IG+  +A G + S+ T +G FTK NAGL F      AS+ + DKGD + 
Sbjct: 124 TQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLN 183

Query: 188 VSY 190
            SY
Sbjct: 184 ASY 186


>AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3 |
           chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +++I K+ RD+L +DY  D                        L  G VA   K+N
Sbjct: 4   GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N T   K+ TDS++LTT T     P  K +   +LP + SGK  VQY H +  ++ +VG 
Sbjct: 64  NFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGF 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
             +P V+FS  +GT  ++ G + +Y+T +G F  +NAG  F      AS+IL DKG+ + 
Sbjct: 124 TATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLN 183

Query: 188 VSYLR 192
            SY +
Sbjct: 184 ASYYQ 188


>AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion
           channel 3 | chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +++I K+ RD+L +DY  D                        L  G VA   K+N
Sbjct: 4   GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N T   K+ TDS++LTT T     P  K +   +LP + SGK  VQY H +  ++ +VG 
Sbjct: 64  NFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGF 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
             +P V+FS  +GT  ++ G + +Y+T +G F  +NAG  F      AS+IL DKG+ + 
Sbjct: 124 TATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLN 183

Query: 188 VSYLR 192
            SY +
Sbjct: 184 ASYYQ 188


>AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion
           channel 5 | chr3:18505836-18507699 REVERSE LENGTH=226
          Length = 226

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 75/197 (38%), Gaps = 50/197 (25%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  F+DI K  +D+L +DY++D                   +K+  L +  VA  +K+ 
Sbjct: 4   GPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQYKYR 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N     K+DTD      F + ++V       SI                 H  LTG    
Sbjct: 64  NTFFDVKIDTD------FNVKSLVYPMNKFVSI----------------DHNTLTG---- 97

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
                                   Y T++  FTKYN G+    P    S+IL DKGDS+K
Sbjct: 98  ------------------------YDTTSRTFTKYNVGVSVTKPDQCVSIILGDKGDSIK 133

Query: 188 VSYLRELERLNGGAIVG 204
            SY+  L+     A VG
Sbjct: 134 ASYVYYLDESTRSATVG 150