Miyakogusa Predicted Gene
- Lj5g3v0308790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0308790.1 tr|G7ICC1|G7ICC1_MEDTR Transcription factor
bHLH85 OS=Medicago truncatula GN=MTR_1g018090 PE=4
SV=1,58.36,0,HLH,Helix-loop-helix domain; helix loop helix
domain,Helix-loop-helix domain; no description,Helix-l,CUFF.52820.1
(344 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr... 161 6e-40
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr... 158 7e-39
AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 157 1e-38
AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 147 9e-36
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 141 6e-34
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953... 102 3e-22
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503... 100 1e-21
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 90 2e-18
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 90 3e-18
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 83 4e-16
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 82 6e-16
AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-12896... 75 6e-14
AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic helix-loo... 74 2e-13
AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 4e-13
AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 4e-13
AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting basic-hel... 71 1e-12
AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 | chr1:63... 70 2e-12
AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 2e-12
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 70 3e-12
AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 3e-12
AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 4e-12
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 69 4e-12
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 69 4e-12
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 69 4e-12
AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 4e-12
AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 4e-12
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 69 4e-12
AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 69 6e-12
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 69 6e-12
AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 68 8e-12
AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 68 8e-12
AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 8e-12
AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 68 8e-12
AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 68 9e-12
AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 68 1e-11
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 67 1e-11
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 67 1e-11
AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 2e-11
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 2e-11
AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 6e-11
AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 7e-11
AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 64 2e-10
AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 64 2e-10
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l... 63 4e-10
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 8e-10
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 61 1e-09
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 61 1e-09
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 61 1e-09
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 60 2e-09
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 60 2e-09
AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT5G09750.1 | Symbols: HEC3 | basic helix-loop-helix (bHLH) DNA-... 60 2e-09
AT3G50330.1 | Symbols: HEC2 | basic helix-loop-helix (bHLH) DNA-... 56 3e-08
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 56 3e-08
AT5G67060.1 | Symbols: HEC1 | basic helix-loop-helix (bHLH) DNA-... 56 4e-08
AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 56 5e-08
AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 56 5e-08
AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 56 5e-08
AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 56 5e-08
AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 5e-08
AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 6e-08
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 9e-08
AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 54 1e-07
AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 54 1e-07
AT3G62090.1 | Symbols: PIL2, PIF6 | phytochrome interacting fact... 54 2e-07
AT3G62090.2 | Symbols: PIL2, PIF6 | phytochrome interacting fact... 53 2e-07
AT3G19500.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 8e-07
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 8e-07
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 51 1e-06
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 50 2e-06
AT1G27660.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 2e-06
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 49 3e-06
AT1G05710.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT1G05710.5 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT1G05710.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT1G05710.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT1G05710.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 6e-06
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 6e-06
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 7e-06
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 49 7e-06
AT1G69010.1 | Symbols: BIM2 | BES1-interacting Myc-like protein ... 48 9e-06
>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
chr1:9654753-9655806 FORWARD LENGTH=258
Length = 258
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 104/129 (80%), Gaps = 8/129 (6%)
Query: 200 SRSKKNLQKLASNGEEAEETTTGSNGQSSCSSITEDDNASMENSVGATSI-GKTRASRGS 258
++SKK Q+++S +E+ T S S+ ++D+ AS+ TS+ GKTRA++G+
Sbjct: 121 AKSKKK-QRVSSESNTVDESNTNWVDGQSLSNSSDDEKASV------TSVKGKTRATKGT 173
Query: 259 ATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDD 318
ATDPQSLYARKRREKINERL+ LQNLVPNGTKVDISTMLEEAV+YVKFLQ+QIKLLSSDD
Sbjct: 174 ATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDD 233
Query: 319 MWMYAPLAY 327
+WMYAPLAY
Sbjct: 234 LWMYAPLAY 242
>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
chr4:16239566-16241052 REVERSE LENGTH=352
Length = 352
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 71/78 (91%), Positives = 78/78 (100%)
Query: 250 GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQV 309
GKTRASRG+ATDPQSLYARKRRE+INERLRILQNLVPNGTKVDISTMLEEAV+YVKFLQ+
Sbjct: 264 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 323
Query: 310 QIKLLSSDDMWMYAPLAY 327
QIKLLSSDD+WMYAP+A+
Sbjct: 324 QIKLLSSDDLWMYAPIAF 341
>AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=328
Length = 328
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/78 (91%), Positives = 77/78 (98%)
Query: 250 GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQV 309
GKTRASRG+ATDPQSLYARKRRE+INERLRILQ+LVPNGTKVDISTMLEEAV YVKFLQ+
Sbjct: 235 GKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQL 294
Query: 310 QIKLLSSDDMWMYAPLAY 327
QIKLLSSDD+WMYAP+AY
Sbjct: 295 QIKLLSSDDLWMYAPIAY 312
>AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=341
Length = 341
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 77/91 (84%), Gaps = 13/91 (14%)
Query: 250 GKTRASRGSATDPQSLYAR-------------KRREKINERLRILQNLVPNGTKVDISTM 296
GKTRASRG+ATDPQSLYAR KRRE+INERLRILQ+LVPNGTKVDISTM
Sbjct: 235 GKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTM 294
Query: 297 LEEAVNYVKFLQVQIKLLSSDDMWMYAPLAY 327
LEEAV YVKFLQ+QIKLLSSDD+WMYAP+AY
Sbjct: 295 LEEAVQYVKFLQLQIKLLSSDDLWMYAPIAY 325
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Query: 207 QKLASNGEEAEETTTGSNGQSSCSSITEDDNASMENSVGATSIG---KTRASRGSATDPQ 263
QKL+S E T S SS D+ V TS K +A+RG A+DPQ
Sbjct: 84 QKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQ 143
Query: 264 SLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMWMYA 323
SLYARKRRE+IN+RL+ LQ+LVPNGTKVDISTMLE+AV+YVKFLQ+QIKLLSS+D+WMYA
Sbjct: 144 SLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYA 203
Query: 324 PLAY 327
PLA+
Sbjct: 204 PLAH 207
>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
chr1:24795326-24796598 FORWARD LENGTH=298
Length = 298
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 11/111 (9%)
Query: 219 TTTGSNGQSSC--------SSITEDDNASMENSVGATSIGKTRA-SRGSATDPQSLYARK 269
TTGS +S S E S + S G T GKT+ S DPQSL A+
Sbjct: 155 VTTGSRNESLSPKSAGNKRSHTGESTQPSKKLSSGVT--GKTKPKPTTSPKDPQSLAAKN 212
Query: 270 RREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMW 320
RRE+I+ERL+ILQ LVPNGTKVD+ TMLE+A++YVKFLQVQ+K+L++D+ W
Sbjct: 213 RRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 263
>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
chr5:15036197-15037574 FORWARD LENGTH=307
Length = 307
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 234 EDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDI 293
E+ S + S G K +A+ S DPQSL A+ RRE+I+ERL++LQ LVPNGTKVD+
Sbjct: 184 ENTQLSKKPSSGTNGKIKPKATT-SPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDL 242
Query: 294 STMLEEAVNYVKFLQVQIKLLSSDDMW 320
TMLE+A+ YVKFLQVQ+K+L++D+ W
Sbjct: 243 VTMLEKAIGYVKFLQVQVKVLAADEFW 269
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
Query: 222 GSNGQSSCSSITEDDNASMENSVGATSIGKT----RASRGSATDPQSLYARKRREKINER 277
GS GQ+ T+ + + GAT+ +T RA RG ATDP S+ R RRE+I ER
Sbjct: 100 GSGGQTQ----TQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAER 155
Query: 278 LRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLS 315
++ LQ LVPNG K D ++ML+E ++YVKFLQ+Q+K+LS
Sbjct: 156 MKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLS 193
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQ 310
K RA RG ATDP S+ R RRE+I ER++ LQ LVPNG K D ++ML+E ++YVKFLQ+Q
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQ 196
Query: 311 IKLLS 315
+K+LS
Sbjct: 197 VKVLS 201
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQ 310
+ RA RG ATDP S+ R RRE+I ER++ LQ LVPN K D ++ML+E + YV+FLQ+Q
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQ 157
Query: 311 IKLLS 315
+K+LS
Sbjct: 158 VKVLS 162
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 259 ATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLL 314
+TDPQ++ AR+RRE+I+E++R+LQ LVP GTK+D ++ML+EA NY+KFL+ Q+K L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-128960
FORWARD LENGTH=912
Length = 912
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
Query: 250 GKTRASRGSAT---DPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKF 306
G T+ SR ++T DPQS+ AR RR +I++R +ILQ++VP G K+D +ML+EA++YVKF
Sbjct: 32 GNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKF 91
Query: 307 LQVQI 311
L+ QI
Sbjct: 92 LKAQI 96
>AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr4:42601-43197 REVERSE LENGTH=198
Length = 198
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 51/69 (73%)
Query: 246 ATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVK 305
AT R + + DPQ++ AR+RRE+I+E++RIL+ +VP G K+D ++ML+EA+ Y K
Sbjct: 106 ATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTK 165
Query: 306 FLQVQIKLL 314
FL+ Q+++L
Sbjct: 166 FLKRQVRIL 174
>AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 253 RASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQI 311
RA RG ATD SL R RREKI+ER+R LQNLVP KV + ML+E +NYV+ LQ Q+
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 312 KLLSSDDMWMYAPLAY 327
+ LS + +P+ Y
Sbjct: 197 EFLSM-KLTSISPVVY 211
>AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 253 RASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQI 311
RA RG ATD SL R RREKI+ER+R LQNLVP KV + ML+E +NYV+ LQ Q+
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 312 KLLSSDDMWMYAPLAY 327
+ LS + +P+ Y
Sbjct: 197 EFLSM-KLTSISPVVY 211
>AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting
basic-helix-loop-helix 1 | chr4:16498466-16499946
FORWARD LENGTH=335
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 18/147 (12%)
Query: 185 KKPRLSKDGQGCMKNSRSKK---NLQKLASNGEEAEETTTGSNGQSSCS-------SITE 234
KK + + + C N + KK N L GEE + T N S+ S + E
Sbjct: 92 KKRKFDTETKDC--NEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKE 149
Query: 235 DDNASMENSVGATSIGKT-----RASRGSATDPQSLYARKRREKINERLRILQNLVPNGT 289
++N S ++S + KT RA RG ATD S+ R RREKI+ER++ LQ+LVP
Sbjct: 150 ENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCD 209
Query: 290 KVD-ISTMLEEAVNYVKFLQVQIKLLS 315
K+ + ML+E +NYV+ LQ QI+ LS
Sbjct: 210 KITGKAGMLDEIINYVQSLQRQIEFLS 236
>AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 |
chr1:6331464-6333576 FORWARD LENGTH=260
Length = 260
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 249 IGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFL 307
+ RA RG ATD SL R RR KINERLR LQ++VP K + ++TML+E +NYV+ L
Sbjct: 142 VVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSL 201
Query: 308 QVQIKLLS 315
Q Q++ LS
Sbjct: 202 QNQVEFLS 209
>AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
Query: 184 KKKPRLSKDGQGCMKNSRSKKNLQKLASNGEEA--EETTTGSNGQSSCSSITEDDNASME 241
KK+ R + ++ RS+++ ++ +NG+E +E + S G+ S S + +S
Sbjct: 236 KKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDP 295
Query: 242 NSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEA 300
G + RA RG AT+ SL R RREKI+ER++ LQ+LVP KV + ML+E
Sbjct: 296 PKDGYIHV---RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 301 VNYVKFLQVQIKLLS 315
+NYV+ LQ Q++ LS
Sbjct: 353 INYVQSLQRQVEFLS 367
>AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
Query: 184 KKKPRLSKDGQGCMKNSRSKKNLQKLASNGEEA--EETTTGSNGQSSCSSITEDDNASME 241
KK+ R + ++ RS+++ ++ +NG+E +E + S G+ S S + +S
Sbjct: 236 KKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDP 295
Query: 242 NSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEA 300
G + RA RG AT+ SL R RREKI+ER++ LQ+LVP KV + ML+E
Sbjct: 296 PKDGYIHV---RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 301 VNYVKFLQVQIKLLS 315
+NYV+ LQ Q++ LS
Sbjct: 353 INYVQSLQRQVEFLS 367
>AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:2341188-2343288 REVERSE
LENGTH=456
Length = 456
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 167 EPEVPANDKTNNRAESQKKKPRLSKDGQG-------CMKNSRSKKNLQKLASNGEEAEET 219
EP + N+K + S KP S G + ++SK+N S+ +E EE
Sbjct: 169 EPPITTNEKMPRVSSSPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEK 228
Query: 220 TTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLR 279
+ S D S++ + RA RG ATD SL R RREKI+ER++
Sbjct: 229 EDSDPKRCKKSEENGDKTKSIDPYKDYIHV---RARRGQATDSHSLAERVRREKISERMK 285
Query: 280 ILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQIKLLS 315
+LQ+LVP KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 286 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 322
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 139 HVGSERLENSADYRHQIQLQLKRKLDVLEPEVPANDKTNNRAESQKKKPRLSKDGQ---- 194
GS+R ++ Q Q K +L+P+ ++ ++ S+K+K S +G+
Sbjct: 76 QFGSDR-----EFGSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPA 130
Query: 195 -GCMKNSRSKKNLQKLAS-NGEEAEETTTGS--NGQSSCSSITEDDNASMENSVGATSIG 250
+ S SK + + S G+ +++ GS NG C S ++ + + I
Sbjct: 131 SSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYI- 189
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQV 309
RA RG ATD SL R RREKI+ER+ +LQ+LVP ++ + ML+E +NYV+ LQ
Sbjct: 190 HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQR 249
Query: 310 QIKLLS 315
Q++ LS
Sbjct: 250 QVEFLS 255
>AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=337
Length = 337
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 163 LDVLEPEVPANDKTNNRAESQKKKPRLSKDGQGCMKNSRSKKNLQKLASNGEEAEETTTG 222
+D +E + ++T A K+KP + K +K +K+ E T +
Sbjct: 103 VDTMEVLLKTGEETRAVALKNKRKPEV--------KTREEQKTEKKIKVEAE----TESS 150
Query: 223 SNGQSSCSSITEDDNASMENSVGATSIGK-----TRASRGSATDPQSLYARKRREKINER 277
G+S+ + + S E S GA+ K RA RG ATD SL R RREKI+++
Sbjct: 151 MKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKK 210
Query: 278 LRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQIKLLS 315
++ LQ++VP KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 211 MKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=335
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 163 LDVLEPEVPANDKTNNRAESQKKKPRLSKDGQGCMKNSRSKKNLQKLASNGEEAEETTTG 222
+D +E + ++T A K+KP + K +K +K+ E T +
Sbjct: 103 VDTMEVLLKTGEETRAVALKNKRKPEV--------KTREEQKTEKKIKVEAE----TESS 150
Query: 223 SNGQSSCSSITEDDNASMENSVGATSIGK-----TRASRGSATDPQSLYARKRREKINER 277
G+S+ + + S E S GA+ K RA RG ATD SL R RREKI+++
Sbjct: 151 MKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKK 210
Query: 278 LRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQIKLLS 315
++ LQ++VP KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 211 MKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%)
Query: 215 EAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKI 274
E E+T + + T D+ S + T R A + +L RKRR++I
Sbjct: 241 EPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 300
Query: 275 NERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLS 315
NER++ LQ L+P K D ++ML+EA+ Y+K LQ+QI+++S
Sbjct: 301 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%)
Query: 215 EAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKI 274
E E+T + + T D+ S + T R A + +L RKRR++I
Sbjct: 241 EPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 300
Query: 275 NERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLS 315
NER++ LQ L+P K D ++ML+EA+ Y+K LQ+QI+++S
Sbjct: 301 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 241 ENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEA 300
E G S T+ SR +A QS RKRR+KIN+R++ LQ LVPN +K D ++ML+E
Sbjct: 198 EKKAGGKSSVSTKRSRAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEV 255
Query: 301 VNYVKFLQVQIKLLSSDDM 319
+ Y+K LQ Q+ ++S +M
Sbjct: 256 IEYLKQLQAQVSMMSRMNM 274
>AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:5847513-5849500 FORWARD
LENGTH=262
Length = 262
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 223 SNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQ 282
S+GQ + ++ + +MEN + + + RA RG AT P+S+ R RR +I++R+R LQ
Sbjct: 156 SSGQVP-TGVSSMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 214
Query: 283 NLVPNGTK-VDISTMLEEAVNYVKFLQVQIKLLSSD 317
LVPN K + + MLEEAV YVK LQ QI+ L+ +
Sbjct: 215 ELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEE 250
>AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7952546-7954446 REVERSE
LENGTH=364
Length = 364
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 163 LDVLEPEVPANDKTNNRAESQKKKPRLSKDGQGCMKNSRSKKNLQKLASNGEEAEETTTG 222
+D +E + ++T A K+KP + K +K +K+ E T +
Sbjct: 103 VDTMEVLLKTGEETRAVALKNKRKPEV--------KTREEQKTEKKIKVEAE----TESS 150
Query: 223 SNGQSSCSSITEDDNASMENSVGATSIGK-----TRASRGSATDPQSLYARKRREKINER 277
G+S+ + + S E S GA+ K RA RG ATD SL R RREKI+++
Sbjct: 151 MKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKK 210
Query: 278 LRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQIKLLS 315
++ LQ++VP KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 211 MKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 200 SRSKKNLQKL-ASNGE----EAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRA 254
S+S K + + AS GE + +E G S + TE ME + + RA
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV---RA 138
Query: 255 SRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQVQIKL 313
RG ATD SL R RREKI+ER++ILQ+LVP KV + +L+E +NY++ LQ Q++
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 314 LS 315
LS
Sbjct: 199 LS 200
>AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:19684160-19686871 FORWARD
LENGTH=498
Length = 498
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQ 310
RA RG ATD SL R RREKI ER+++LQ+LVP KV + ML+E +NYV+ LQ Q
Sbjct: 301 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 360
Query: 311 IKLLS 315
++ LS
Sbjct: 361 VEFLS 365
>AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=485
Length = 485
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 201 RSKKNLQKLASNGEEA--EETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGS 258
RS+++ ++ +NG+E +E + S G+ S S + +S G + RA RG
Sbjct: 252 RSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHV---RARRGQ 308
Query: 259 ATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQVQIKLLS 315
AT+ SL R RREKI+ER++ LQ+LVP KV + ML+E +NYV+ LQ Q++ LS
Sbjct: 309 ATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLS 366
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%)
Query: 215 EAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKI 274
E E+T + + T D+ S + T R A + +L RKRR++I
Sbjct: 170 EPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRI 229
Query: 275 NERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLS 315
NER++ LQ L+P K D ++ML+EA+ Y+K LQ+QI+++S
Sbjct: 230 NERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 270
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 200 SRSKKNLQKL-ASNGE----EAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRA 254
S+S K + + AS GE + +E G S + TE ME + + RA
Sbjct: 82 SKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHV---RA 138
Query: 255 SRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQVQIKL 313
RG ATD SL R RREKI+ER++ILQ+LVP KV + +L+E +NY++ LQ Q++
Sbjct: 139 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 198
Query: 314 LS 315
LS
Sbjct: 199 LS 200
>AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 253 RASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQVQI 311
RA RG AT+ SL R RREKI+ER++ LQ+LVP KV + ML+E +NYV+ LQ QI
Sbjct: 224 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 283
Query: 312 KLLS 315
+ LS
Sbjct: 284 EFLS 287
>AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 253 RASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQVQI 311
RA RG AT+ SL R RREKI+ER++ LQ+LVP KV + ML+E +NYV+ LQ QI
Sbjct: 224 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 283
Query: 312 KLLS 315
+ LS
Sbjct: 284 EFLS 287
>AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:18943802-18945613 REVERSE
LENGTH=379
Length = 379
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPN-GTKVDISTMLEEAVNYVKFLQV 309
K RA RG AT P+S+ R RR KI+ER+R LQ+LVPN T+ + + ML+ AV Y+K LQ
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 362
Query: 310 QIKLL 314
Q+K L
Sbjct: 363 QVKAL 367
>AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=339
Length = 339
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 253 RASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQI 311
RA RG AT+ SL R RREKI+ER++ LQ+LVP KV + ML+E +NYV+ LQ QI
Sbjct: 173 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 232
Query: 312 KLLS 315
+ LS
Sbjct: 233 EFLS 236
>AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=261
Length = 261
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQVQ 310
RA RG ATD S+ R RR KINERL+ LQ++VP K + ++TML+E +NYV+ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 311 IKLLS 315
++ LS
Sbjct: 207 VEFLS 211
>AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=260
Length = 260
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQVQ 310
RA RG ATD S+ R RR KINERL+ LQ++VP K + ++TML+E +NYV+ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 311 IKLLS 315
++ LS
Sbjct: 207 VEFLS 211
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 253 RASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQVQI 311
RA RG AT+ SL R RREKI+ER+R+LQ LVP K+ + ML+E +NYV+ LQ Q+
Sbjct: 207 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 266
Query: 312 KLLS 315
+ LS
Sbjct: 267 EFLS 270
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 241 ENSVGATSIGKTRASRGS----ATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTM 296
E+ G G +R GS + + +L R+RR++INE++R LQ L+PN KVD ++M
Sbjct: 322 ESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 381
Query: 297 LEEAVNYVKFLQVQIKLLSSDDMWMYAP 324
L+EA+ Y+K LQ+Q++++S + P
Sbjct: 382 LDEAIEYLKSLQLQVQIMSMASGYYLPP 409
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 241 ENSVGATSIGKTRASRGS----ATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTM 296
E+ G G +R GS + + +L R+RR++INE++R LQ L+PN KVD ++M
Sbjct: 322 ESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 381
Query: 297 LEEAVNYVKFLQVQIKLLSSDDMWMYAP 324
L+EA+ Y+K LQ+Q++++S + P
Sbjct: 382 LDEAIEYLKSLQLQVQIMSMASGYYLPP 409
>AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:8880515-8882018 REVERSE
LENGTH=223
Length = 223
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 249 IGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFL 307
+ RA RG ATD SL R RREKINERL+ LQ+LVP K + ++ ML+ ++YV+ L
Sbjct: 101 VVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSL 160
Query: 308 QVQIKLLS 315
Q QI+ LS
Sbjct: 161 QNQIEFLS 168
>AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:13040092-13041907 FORWARD
LENGTH=259
Length = 259
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQV 309
+ RA RG AT P+S+ R RR +I++R+R LQ LVPN K + + MLEEAV YVK LQ
Sbjct: 180 RVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQS 239
Query: 310 QIKLLS 315
QI+ L+
Sbjct: 240 QIQELT 245
>AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17611428-17613163 REVERSE
LENGTH=359
Length = 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 198 KNSRSKKNLQKLASNGEEAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRG 257
+N S +Q L+ + + ++T S+ ++ D +++SV K RA RG
Sbjct: 235 QNGESGNRMQLLSHHLSLPKSSSTASD------MVSVDKYLQLQDSVPC----KIRAKRG 284
Query: 258 SATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQVQIKLL 314
AT P+S+ R RR +I+ER+R LQ LVPN K + S ML+ AV+Y+K LQ Q K+L
Sbjct: 285 CATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKIL 342
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQ 310
RA RG ATD SL R RREKIN R+++LQ LVP K+ + +L+E +N+V+ LQ Q
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 263
Query: 311 IKLLS 315
+++LS
Sbjct: 264 VEMLS 268
>AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17624635 FORWARD
LENGTH=327
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQVQ 310
RA RG ATD SL R RREKIN R+++LQ LVP K+ + +L+E +N+V+ LQ Q
Sbjct: 185 VRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQ 244
Query: 311 IKLLS 315
+++LS
Sbjct: 245 VEMLS 249
>AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=302
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 238 ASMENSVGATSIGK-----TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
++M N+ ++ I K RA RG ATD SL R RREKI+++++ LQ++VP KV
Sbjct: 122 SNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVT 181
Query: 293 -ISTMLEEAVNYVKFLQVQIKLLS 315
+ ML+E +NYV+ LQ Q++ LS
Sbjct: 182 GKAGMLDEIINYVQSLQQQVEFLS 205
>AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=304
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 238 ASMENSVGATSIGK-----TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
++M N+ ++ I K RA RG ATD SL R RREKI+++++ LQ++VP KV
Sbjct: 122 SNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVT 181
Query: 293 -ISTMLEEAVNYVKFLQVQIKLLS 315
+ ML+E +NYV+ LQ Q++ LS
Sbjct: 182 GKAGMLDEIINYVQSLQQQVEFLS 205
>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
1 | chr2:19295617-19297678 REVERSE LENGTH=416
Length = 416
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 215 EAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKI 274
E EE+T SN ++D++ + V A + K R +T+ LY RKRR++
Sbjct: 194 EEEESTYLSNN-------SDDESDDAKTQVHART-RKPVTKRKRSTEVHKLYERKRRDEF 245
Query: 275 NERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMWMYAP 324
N+++R LQ+L+PN K D +++L+EA+ Y++ LQ+Q++++S + + P
Sbjct: 246 NKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRPP 295
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQI 311
T + R A L R+RR+KINE ++ LQ L+P TK D S+ML++ + YVK LQ QI
Sbjct: 271 TSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQI 330
Query: 312 KLLSSDDMWMYAPLAY 327
++ S + M P+ Y
Sbjct: 331 QMFSMGHV-MIPPMMY 345
>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 247 TSI-GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVK 305
TSI + RA RG ATDP S+ R RRE+I ER+R LQ LVP K D + M++E V+YVK
Sbjct: 140 TSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVK 199
Query: 306 FLQVQIKLLS 315
FL++Q+K+LS
Sbjct: 200 FLRLQVKVLS 209
>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 247 TSI-GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVK 305
TSI + RA RG ATDP S+ R RRE+I ER+R LQ LVP K D + M++E V+YVK
Sbjct: 140 TSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVK 199
Query: 306 FLQVQIKLLS 315
FL++Q+K+LS
Sbjct: 200 FLRLQVKVLS 209
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 47/67 (70%)
Query: 259 ATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDD 318
A + +L ++RR +INE+++ LQ+L+PN K D ++ML+EA+ Y+K LQ+Q+++L+ +
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
Query: 319 MWMYAPL 325
PL
Sbjct: 258 GINLHPL 264
>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140117
REVERSE LENGTH=247
Length = 247
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 247 TSI-GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVK 305
TSI + RA RG ATDP S+ R RRE+I ER+R LQ LVP K D + M++E V+YVK
Sbjct: 77 TSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVK 136
Query: 306 FLQVQIKLLS 315
FL++Q+K+LS
Sbjct: 137 FLRLQVKVLS 146
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 250 GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQV 309
G T R A + +L R+RREKINER++ LQ L+P K +MLE+ + YVK L++
Sbjct: 142 GSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEM 201
Query: 310 QI-KLLSSDDMWMYAPLAY 327
QI + + M M P AY
Sbjct: 202 QINQFMPHMAMGMNQPPAY 220
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%)
Query: 265 LYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLS 315
L +KRR KINE+++ LQ L+PN K D ++ML+EA+ Y+K LQ+Q++ L+
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA 150
>AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1744843-1747427 FORWARD
LENGTH=362
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQV 309
K RA RG AT P+S+ R+RR +I+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 282 KIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQH 341
Query: 310 QIKLLSSD 317
Q++ L D
Sbjct: 342 QLQNLKKD 349
>AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=302
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQ 310
+ RA RG ATDP S+ R RRE+I ER+R LQ LVP K D + M++E V+YVKFL++Q
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQ 202
Query: 311 IKLLS 315
+K+LS
Sbjct: 203 VKVLS 207
>AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=297
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQ 310
+ RA RG ATDP S+ R RRE+I ER+R LQ LVP K D + M++E V+YVKFL++Q
Sbjct: 138 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQ 197
Query: 311 IKLLS 315
+K+LS
Sbjct: 198 VKVLS 202
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQVQ 310
RA RG ATD SL R RREKI+E++ LQ+++P K + + +L+E +NY++ LQ Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 311 IKLLS 315
++ LS
Sbjct: 213 VEFLS 217
>AT5G09750.1 | Symbols: HEC3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:3026401-3027075
REVERSE LENGTH=224
Length = 224
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 52/64 (81%)
Query: 261 DPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMW 320
DPQS+ AR RRE+I+ER+RILQ LVP GTK+D ++ML+EA+ YVKFL+ QI+LL+++ +
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGY 187
Query: 321 MYAP 324
P
Sbjct: 188 TPPP 191
>AT3G50330.1 | Symbols: HEC2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:18657423-18658118
REVERSE LENGTH=231
Length = 231
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 47/54 (87%)
Query: 261 DPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLL 314
DPQS+ AR RRE+I+ER+RILQ LVP GTK+D ++ML+EA++YVKFL+ Q++ L
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQI 311
T + R A L R+RR+KINE ++ LQ L+P TK D S+ML++ + YVK LQ QI
Sbjct: 271 TSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQI 330
Query: 312 K 312
+
Sbjct: 331 Q 331
>AT5G67060.1 | Symbols: HEC1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26766276-26767001
FORWARD LENGTH=241
Length = 241
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 246 ATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVK 305
A K R R S DPQS+ AR RRE+I+ER+RILQ LVP GTK+D ++ML+EA++YVK
Sbjct: 117 AVKPPKRRNVRISK-DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 175
Query: 306 FLQVQIKLL 314
FL+ Q++ L
Sbjct: 176 FLKKQVQSL 184
>AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=442
Length = 442
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 232 ITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV 291
+T D+ +M N S G TR SR A + +L R+RR++INER++ LQ L+P+ ++
Sbjct: 233 LTSTDDQTMGNKSSQRS-GSTRRSR--AAEVHNLSERRRRDRINERMKALQELIPHCSRT 289
Query: 292 DISTMLEEAVNYVKFLQVQIKLLSSDDMWM 321
D +++L+EA++Y+K LQ+Q+++ MWM
Sbjct: 290 DKASILDEAIDYLKSLQMQLQV-----MWM 314
>AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 232 ITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV 291
+T D+ +M N S G TR SR A + +L R+RR++INER++ LQ L+P+ ++
Sbjct: 233 LTSTDDQTMGNKSSQRS-GSTRRSR--AAEVHNLSERRRRDRINERMKALQELIPHCSRT 289
Query: 292 DISTMLEEAVNYVKFLQVQIKLLSSDDMWM 321
D +++L+EA++Y+K LQ+Q+++ MWM
Sbjct: 290 DKASILDEAIDYLKSLQMQLQV-----MWM 314
>AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 232 ITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV 291
+T D+ +M N S G TR SR A + +L R+RR++INER++ LQ L+P+ ++
Sbjct: 233 LTSTDDQTMGNKSSQRS-GSTRRSR--AAEVHNLSERRRRDRINERMKALQELIPHCSRT 289
Query: 292 DISTMLEEAVNYVKFLQVQIKLLSSDDMWM 321
D +++L+EA++Y+K LQ+Q+++ MWM
Sbjct: 290 DKASILDEAIDYLKSLQMQLQV-----MWM 314
>AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 232 ITEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKV 291
+T D+ +M N S G TR SR A + +L R+RR++INER++ LQ L+P+ ++
Sbjct: 233 LTSTDDQTMGNKSSQRS-GSTRRSR--AAEVHNLSERRRRDRINERMKALQELIPHCSRT 289
Query: 292 DISTMLEEAVNYVKFLQVQIKLLSSDDMWM 321
D +++L+EA++Y+K LQ+Q+++ MWM
Sbjct: 290 DKASILDEAIDYLKSLQMQLQV-----MWM 314
>AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17931680-17935639 REVERSE
LENGTH=309
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQV 309
+ RA RG AT P+S+ R+RR +I+ +L+ LQ LVPN K + ML+ AV ++K LQ
Sbjct: 230 RARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQH 289
Query: 310 QIKLL 314
Q++ L
Sbjct: 290 QVESL 294
>AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17932376-17935639 REVERSE
LENGTH=297
Length = 297
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 251 KTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQV 309
+ RA RG AT P+S+ R+RR +I+ +L+ LQ LVPN K + ML+ AV ++K LQ
Sbjct: 232 RARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQH 291
Query: 310 QIKL 313
Q+++
Sbjct: 292 QVEV 295
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 250 GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQV 309
G T R + +L R+RREKINE+++ LQ L+P K + L++A+ YVK LQ
Sbjct: 247 GSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQS 306
Query: 310 QIKLLSSDDM 319
QI+ + S M
Sbjct: 307 QIQGMMSPMM 316
>AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428
Length = 428
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 235 DDNASMENSVGATSIGKTRASRGS-ATDPQSLYARKRREKINERLRILQNLVPNGTKVDI 293
D++ S+ +++G S ++ ++R S A + +L R+RR++INER++ LQ L+P+ +K D
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDK 292
Query: 294 STMLEEAVNYVKFLQVQIKLL 314
+++L+EA++Y+K LQ+Q++++
Sbjct: 293 ASILDEAIDYLKSLQLQLQVM 313
>AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=430
Length = 430
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 235 DDNASMENSVGATSIGKTRASRGS-ATDPQSLYARKRREKINERLRILQNLVPNGTKVDI 293
D++ S+ +++G S ++ ++R S A + +L R+RR++INER++ LQ L+P+ +K D
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDK 292
Query: 294 STMLEEAVNYVKFLQVQIKLL 314
+++L+EA++Y+K LQ+Q++++
Sbjct: 293 ASILDEAIDYLKSLQLQLQVM 313
>AT3G62090.1 | Symbols: PIL2, PIF6 | phytochrome interacting factor
3-like 2 | chr3:22989097-22990495 REVERSE LENGTH=346
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 268 RKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMW----MYA 323
R +R IN+++R LQNL+PN K D +ML+EA+NY+ LQ+Q+++++ + + M
Sbjct: 181 RNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMM 240
Query: 324 PLA 326
PL
Sbjct: 241 PLG 243
>AT3G62090.2 | Symbols: PIL2, PIF6 | phytochrome interacting factor
3-like 2 | chr3:22989097-22990546 REVERSE LENGTH=363
Length = 363
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 268 RKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMW----MYA 323
R +R IN+++R LQNL+PN K D +ML+EA+NY+ LQ+Q+++++ + + M
Sbjct: 198 RNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMM 257
Query: 324 PLA 326
PL
Sbjct: 258 PLG 260
>AT3G19500.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:6759289-6760893 REVERSE
LENGTH=270
Length = 270
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 267 ARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSS 316
A+ R+E++ ER+ LQ LV K D +++L EA+ Y+KFLQ QI++L S
Sbjct: 153 AKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCS 202
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 250 GKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFL 307
G TR RGS S R+RR N+R L+NL+PN TK+D ++++ EA++Y+K L
Sbjct: 235 GVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 39/47 (82%)
Query: 268 RKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLL 314
R+RREK+N+R L+++VPN +K+D +++L +A++Y+K LQ ++K++
Sbjct: 401 RQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIM 447
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 268 RKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLL 314
R+RR+K+N+RL L++LVP TK+D +++L +A+NYVK LQ + K L
Sbjct: 320 RRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKEL 366
>AT1G27660.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:9621701-9625666 FORWARD
LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 237 NASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVDISTM 296
N M G + K R S+ P + R+EK+ +R+ LQ LV K D +++
Sbjct: 305 NFLMATKAGENASKKPRVESRSSCPP----FKVRKEKLGDRIAALQQLVSPFGKTDTASV 360
Query: 297 LEEAVNYVKFLQVQIKLLS 315
L EA+ Y+KFLQ QI+ LS
Sbjct: 361 LMEAIGYIKFLQSQIETLS 379
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 206 LQKLASNGEEAEETTTGSNGQSSCSSITEDDNASMENSVGATSIGKTRASRGSATDPQSL 265
L L SN E+ + G + ++ ED N ++S T+ TR ++ + ++L
Sbjct: 76 LPDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNNDGTRKTKTDRS--RTL 133
Query: 266 YA-RKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKLLSSDDMWMYAP 324
+ R+RR ++ ++L L++LVPN TK+D ++++ +AV YV+ LQ Q K L SD + A
Sbjct: 134 ISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEAS 193
Query: 325 L 325
L
Sbjct: 194 L 194
>AT1G05710.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1716198-1717023 FORWARD
LENGTH=171
Length = 171
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 233 TEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
+ D MEN S+G++ R + S +++R++K+ ER+ LQ +V K D
Sbjct: 4 SRDAGMMMENKRNVCSLGESSIKRHKSD--LSFSSKERKDKVGERISALQQIVSPYGKTD 61
Query: 293 ISTMLEEAVNYVKFLQVQIKLLSSDDMWMYAPLA 326
+++L +A++Y++FL Q+K+ SS +++ L+
Sbjct: 62 TASVLLDAMHYIEFLHEQVKVCSSIPSMIHSSLS 95
>AT1G05710.5 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1716198-1717023 FORWARD
LENGTH=149
Length = 149
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 233 TEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
+ D MEN S+G++ R + S +++R++K+ ER+ LQ +V K D
Sbjct: 4 SRDAGMMMENKRNVCSLGESSIKRHKSD--LSFSSKERKDKVGERISALQQIVSPYGKTD 61
Query: 293 ISTMLEEAVNYVKFLQVQIKLLSS 316
+++L +A++Y++FL Q+K+LS+
Sbjct: 62 TASVLLDAMHYIEFLHEQVKVLSA 85
>AT1G05710.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1716198-1717023 FORWARD
LENGTH=149
Length = 149
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 233 TEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
+ D MEN S+G++ R + S +++R++K+ ER+ LQ +V K D
Sbjct: 4 SRDAGMMMENKRNVCSLGESSIKRHKSD--LSFSSKERKDKVGERISALQQIVSPYGKTD 61
Query: 293 ISTMLEEAVNYVKFLQVQIKLLSS 316
+++L +A++Y++FL Q+K+LS+
Sbjct: 62 TASVLLDAMHYIEFLHEQVKVLSA 85
>AT1G05710.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1716198-1717023 FORWARD
LENGTH=149
Length = 149
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 233 TEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
+ D MEN S+G++ R + S +++R++K+ ER+ LQ +V K D
Sbjct: 4 SRDAGMMMENKRNVCSLGESSIKRHKSD--LSFSSKERKDKVGERISALQQIVSPYGKTD 61
Query: 293 ISTMLEEAVNYVKFLQVQIKLLSS 316
+++L +A++Y++FL Q+K+LS+
Sbjct: 62 TASVLLDAMHYIEFLHEQVKVLSA 85
>AT1G05710.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1716198-1717023 FORWARD
LENGTH=149
Length = 149
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 233 TEDDNASMENSVGATSIGKTRASRGSATDPQSLYARKRREKINERLRILQNLVPNGTKVD 292
+ D MEN S+G++ R + S +++R++K+ ER+ LQ +V K D
Sbjct: 4 SRDAGMMMENKRNVCSLGESSIKRHKSD--LSFSSKERKDKVGERISALQQIVSPYGKTD 61
Query: 293 ISTMLEEAVNYVKFLQVQIKLLSS 316
+++L +A++Y++FL Q+K+LS+
Sbjct: 62 TASVLLDAMHYIEFLHEQVKVLSA 85
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 62/105 (59%), Gaps = 13/105 (12%)
Query: 234 EDDNASMENSVGATSIGKTRASRGSATDPQS----LYARKRREKINERLRILQNLVPNGT 289
E D+ ME + + G++ + G+AT P S + R RR+K+N+RL L+++VPN +
Sbjct: 24 EFDSWPMEEAFSGS--GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNIS 81
Query: 290 KVDISTMLEEAVNYV-------KFLQVQIKLLSSDDMWMYAPLAY 327
K+D +++++++++Y+ K L+ +I+ L S + P+ Y
Sbjct: 82 KLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPMDY 126
>AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=426
Length = 426
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 48/112 (42%)
Query: 252 TRASRGSATDPQSLYARKRREKINERLRILQNLVP------------------------- 286
RA RG ATD SL R RREKIN R+++LQ LVP
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHLLMI 263
Query: 287 NGTKVDI-----------------------STMLEEAVNYVKFLQVQIKLLS 315
+G KV I + +L+E +N+V+ LQ Q+++LS
Sbjct: 264 SGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLS 315
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 257 GSATDPQS---LYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKL 313
G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A++Y++ LQ + K
Sbjct: 46 GAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKK 105
Query: 314 LSSD 317
L ++
Sbjct: 106 LEAE 109
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 257 GSATDPQS---LYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKL 313
G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A++Y++ LQ + K
Sbjct: 47 GAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKK 106
Query: 314 LSSD 317
L ++
Sbjct: 107 LEAE 110
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 257 GSATDPQS---LYARKRREKINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQVQIKL 313
G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A++Y++ LQ + K
Sbjct: 47 GAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKK 106
Query: 314 LSSD 317
L ++
Sbjct: 107 LEAE 110
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Query: 234 EDDNASMENSVGATSIGKTRASRGSATDPQS----LYARKRREKINERLRILQNLVPNGT 289
E D+ ME + + G++ + G+AT P S + R RR+K+N+RL L+++VPN +
Sbjct: 24 EFDSWPMEEAFSGS--GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNIS 81
Query: 290 KVDISTMLEEAVNYVKFLQVQIKLLSSD 317
K+D +++++++++Y++ L Q K L ++
Sbjct: 82 KLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 230 SSITEDDNASMENSVGATSIGKTRASRGSATDPQ-----SLYARKRREKINERLRILQNL 284
+S+ + SM+ VG+ K + G +P L RKRR+K+NERL L L
Sbjct: 97 TSLNFSNQVSMDQKVGSKR--KDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSAL 154
Query: 285 VPNGTKVDISTMLEEAVNYVKFLQVQIKLL 314
+P K D +T+LE+A+ ++K LQ ++K L
Sbjct: 155 LPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
>AT1G69010.1 | Symbols: BIM2 | BES1-interacting Myc-like protein 2 |
chr1:25941804-25943599 FORWARD LENGTH=311
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 221 TGSNGQSSCSSITEDDNASMENSVGATSIGKTRASR-----GSATDPQSLYARKRREKIN 275
TG Q ED N+ E T++ R S+ + S+ ++RR KIN
Sbjct: 3 TGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKIN 62
Query: 276 ERLRILQNLVPNG-TKVDISTMLEEAVNYVKFLQVQIK 312
ER +IL+ L+PN K D ++ L E ++YV++LQ +++
Sbjct: 63 ERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100