Miyakogusa Predicted Gene
- Lj5g3v0308360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0308360.1 tr|D7MA34|D7MA34_ARALL Predicted protein
(Fragment) OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,56.14,0.00000000000007,DUF616,Protein of unknown function
DUF616; SUBFAMILY NOT NAMED,NULL; ALKALINE
CERAMIDASE-RELATED,NUL,CUFF.52788.1
(258 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42660.1 | Symbols: | Protein of unknown function (DUF616) |... 241 4e-64
AT4G38500.1 | Symbols: | Protein of unknown function (DUF616) |... 64 1e-10
AT2G02910.1 | Symbols: | Protein of unknown function (DUF616) |... 63 2e-10
AT1G34550.1 | Symbols: EMB2756 | Protein of unknown function (DU... 57 9e-09
AT4G09630.1 | Symbols: | Protein of unknown function (DUF616) |... 57 1e-08
AT1G28240.1 | Symbols: | Protein of unknown function (DUF616) |... 55 5e-08
AT1G53040.2 | Symbols: | Protein of unknown function (DUF616) |... 51 9e-07
AT1G53040.1 | Symbols: | Protein of unknown function (DUF616) |... 51 9e-07
>AT5G42660.1 | Symbols: | Protein of unknown function (DUF616) |
chr5:17103062-17105785 REVERSE LENGTH=463
Length = 463
Score = 241 bits (614), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 174/256 (67%), Gaps = 20/256 (7%)
Query: 1 MFHNNNSLSVSIPVSDDEPDELGXXXXXXXXXXXXLTHR------RFLRKLLVRYWMLLI 54
MF+NN SVSI VSDDE ++L ++HR R + +L VRYW++L+
Sbjct: 1 MFNNN---SVSISVSDDESNDLNRIRARTRRKRKKVSHRTSYELPRHVLRLFVRYWVVLV 57
Query: 55 IIPTACLLFFEASRIARKPSFNVNSDIQTRTPVDRSSPPLRKETHSNLNRLDPTTHVVAG 114
+ LL FE++RI K +SD++ + SP K+ NLNRLDPTT V+ G
Sbjct: 58 FLLAVGLLVFESTRIGFK-----SSDLKKPDLNGKESPS--KKNEGNLNRLDPTTKVIGG 110
Query: 115 VRERCLKLLPPEKLDQLDIPVEEESRLPVGKVLYMSESDLSIPGGNATLSQLRAEDTRFN 174
VR+RCLKLLPPE+L+ LDI ++S PV +V+Y++++D+S+ + +R TRFN
Sbjct: 111 VRQRCLKLLPPEELEHLDILERKDSGSPVKRVVYLTDTDVSV----GEMRGVRGNGTRFN 166
Query: 175 LFTGNQTFEQRDRSFEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGD 234
LFTGNQTF +R+ SF+V+ET+ +HCGF++ENGGF+ISD+D+ +M C+V VSTCAFGGGD
Sbjct: 167 LFTGNQTFAERENSFQVRETVSLHCGFFNENGGFRISDKDKKFMTSCEVVVSTCAFGGGD 226
Query: 235 DLYQPIGMSEASLKKV 250
+LY+PIGMS+ S +KV
Sbjct: 227 NLYEPIGMSKTSSQKV 242
>AT4G38500.1 | Symbols: | Protein of unknown function (DUF616) |
chr4:18008418-18010693 FORWARD LENGTH=499
Length = 499
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 128 LDQLDIPVEEESRLPV------GKVLYMSESDLSIPGGNAT-LSQLRAEDTRFNLFTGNQ 180
LD + + + R P+ KVL S+ N T +++ + ++F LF GN
Sbjct: 100 LDTIGFVPKPQHRCPIPVDYDPDKVLLPSDKTADTIVRNLTYVTEDESSKSQFPLFGGNI 159
Query: 181 TFEQRDRSFEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGDDLYQPI 240
++ +R+ SF++K M VHCGF GG ++S D+ Y+++C+ V+T F D+ +QP
Sbjct: 160 SWSEREESFKLKPEMKVHCGFMP-RGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPS 218
Query: 241 GMSEASLKKVTMLYKV 256
+S+ S+ L V
Sbjct: 219 NISKRSMNLFCFLMVV 234
>AT2G02910.1 | Symbols: | Protein of unknown function (DUF616) |
chr2:847335-849371 REVERSE LENGTH=460
Length = 460
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 176 FTGNQTFEQRDRSFE-VKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGD 234
F G+QT +R+RS+ V +T +HCGF + GF +S++DR+YM+ C V+VS+C FG D
Sbjct: 155 FGGHQTLSERERSYSAVNQT--IHCGFV-KGTGFDLSEKDRAYMKNCVVSVSSCIFGSSD 211
Query: 235 DLYQPI--GMSEASLKKVTML 253
L +P +SE S + V +
Sbjct: 212 FLRRPATKKISEFSKRNVCFV 232
>AT1G34550.1 | Symbols: EMB2756 | Protein of unknown function
(DUF616) | chr1:12647088-12652646 REVERSE LENGTH=735
Length = 735
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYMQECKVAVSTCAF 230
F G+Q+ ++R+ SF V + +HCGF S + GF ++++D +Y+ C +AVS+C F
Sbjct: 421 FAGHQSLQEREDSF-VAQDKKIHCGFVKGPKGSSSTGFDLTEDDTNYISRCHIAVSSCIF 479
Query: 231 GGGDDLYQPIGMSEASLKKVTMLYKVY 257
G D L P + L + + + V+
Sbjct: 480 GNSDRLRPPANKMISRLSRKNVCFIVF 506
>AT4G09630.1 | Symbols: | Protein of unknown function (DUF616) |
chr4:6083860-6087802 FORWARD LENGTH=711
Length = 711
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFYSE-----NGGFKISDEDRSYMQECKVAVSTCAF 230
F G+Q+ ++R+ SF V+E +HCGF + GF ++++D +Y+ +C +AV +C F
Sbjct: 396 FAGHQSLQEREDSFLVQE-QKIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIF 454
Query: 231 GGGDDLYQPIGMSEASLKKVTMLYKVY 257
G D L P +SL + + + V+
Sbjct: 455 GNSDRLRHPANKMVSSLSRKDVCFVVF 481
>AT1G28240.1 | Symbols: | Protein of unknown function (DUF616) |
chr1:9868521-9871798 REVERSE LENGTH=581
Length = 581
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYMQECK-VAVSTCA 229
F G T + R+ SF++KETM VHCGF N GF I + D M++C+ + V++
Sbjct: 214 FGGYPTLKHRNDSFDIKETMSVHCGFVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAV 273
Query: 230 FGGGDDLYQPIGMSEASLKKV 250
F DD+ P +S+ + + V
Sbjct: 274 FDAFDDVKAPQNISKYAEETV 294
>AT1G53040.2 | Symbols: | Protein of unknown function (DUF616) |
chr1:19764567-19766870 REVERSE LENGTH=540
Length = 540
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDED--RSYMQECKVAVSTC 228
F G + E R SF++KE+M VHCGF GF I DED Q V V++
Sbjct: 187 FGGYPSLEHRTNSFDIKESMTVHCGFIKGTKPGHQTGFDI-DEDILHELDQSHDVIVASA 245
Query: 229 AFGGGDDLYQPIGMSEASLKKV 250
FG D + +P+ +SE + K +
Sbjct: 246 IFGKYDIIQEPVNISEMARKNI 267
>AT1G53040.1 | Symbols: | Protein of unknown function (DUF616) |
chr1:19764567-19766870 REVERSE LENGTH=540
Length = 540
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDED--RSYMQECKVAVSTC 228
F G + E R SF++KE+M VHCGF GF I DED Q V V++
Sbjct: 187 FGGYPSLEHRTNSFDIKESMTVHCGFIKGTKPGHQTGFDI-DEDILHELDQSHDVIVASA 245
Query: 229 AFGGGDDLYQPIGMSEASLKKV 250
FG D + +P+ +SE + K +
Sbjct: 246 IFGKYDIIQEPVNISEMARKNI 267