Miyakogusa Predicted Gene

Lj5g3v0294890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0294890.1 Non Chatacterized Hit- tr|E0VVF7|E0VVF7_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,46.49,6e-18,seg,NULL; Repeated motif present between
transmembrane,Cystinosin/ERS1p repeat; PQ-loop,NULL;
SUBFAM,CUFF.52755.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G07390.1 | Symbols:  | Mannose-P-dolichol utilization defect ...   218   2e-57
AT5G59470.1 | Symbols:  | Mannose-P-dolichol utilization defect ...   204   2e-53
AT5G59470.2 | Symbols:  | Mannose-P-dolichol utilization defect ...   179   8e-46

>AT4G07390.1 | Symbols:  | Mannose-P-dolichol utilization defect 1
           protein | chr4:4195750-4197317 FORWARD LENGTH=235
          Length = 235

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 102/147 (69%), Positives = 122/147 (82%)

Query: 1   MEYLGIDVTCAVNSLRHGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVR 60
           M+YLGID++CA+ SLR+G+FP+KDCLLPLISKLLGY +VAAS TVKLPQI+KI++H+SVR
Sbjct: 1   MDYLGIDMSCAIGSLRNGDFPEKDCLLPLISKLLGYCLVAASITVKLPQIMKIVQHKSVR 60

Query: 61  GLSMLSFELEVVGYTIALAYCLHKGLPFSAYGEXXXXXXXXXXXXXXXYYYSRPVRTATW 120
           GLS+++FELEVVGYTI+LAYCLHKGLPFSA+GE               YYYS+PV   TW
Sbjct: 61  GLSVVAFELEVVGYTISLAYCLHKGLPFSAFGEMAFLLIQALILVACIYYYSQPVPVTTW 120

Query: 121 IRALLYSAAAPTILAGQIDPFLFEALY 147
           IR LLY A APT+LAGQI+P LFEALY
Sbjct: 121 IRPLLYCAVAPTVLAGQINPTLFEALY 147


>AT5G59470.1 | Symbols:  | Mannose-P-dolichol utilization defect 1
           protein | chr5:23978611-23979414 FORWARD LENGTH=239
          Length = 239

 Score =  204 bits (518), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 93/147 (63%), Positives = 119/147 (80%)

Query: 1   MEYLGIDVTCAVNSLRHGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVR 60
           M+YLGID++CA+ SLR+G FP KDCLLPLISKLLGY +VAAS TVKLPQI+KI+ ++SV+
Sbjct: 1   MDYLGIDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVK 60

Query: 61  GLSMLSFELEVVGYTIALAYCLHKGLPFSAYGEXXXXXXXXXXXXXXXYYYSRPVRTATW 120
           GLS+++FELEV+GYTI+LAYCL+K LPFSA+GE               YY+S+P+   TW
Sbjct: 61  GLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIYYFSQPLSVTTW 120

Query: 121 IRALLYSAAAPTILAGQIDPFLFEALY 147
           ++A+LY A APT+ AG+IDPFLFEALY
Sbjct: 121 VKAILYFAIAPTVFAGKIDPFLFEALY 147


>AT5G59470.2 | Symbols:  | Mannose-P-dolichol utilization defect 1
           protein | chr5:23978611-23979218 FORWARD LENGTH=148
          Length = 148

 Score =  179 bits (453), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 107/135 (79%)

Query: 1   MEYLGIDVTCAVNSLRHGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVR 60
           M+YLGID++CA+ SLR+G FP KDCLLPLISKLLGY +VAAS TVKLPQI+KI+ ++SV+
Sbjct: 1   MDYLGIDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVK 60

Query: 61  GLSMLSFELEVVGYTIALAYCLHKGLPFSAYGEXXXXXXXXXXXXXXXYYYSRPVRTATW 120
           GLS+++FELEV+GYTI+LAYCL+K LPFSA+GE               YY+S+P+   TW
Sbjct: 61  GLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIYYFSQPLSVTTW 120

Query: 121 IRALLYSAAAPTILA 135
           ++A+LY A APT+ A
Sbjct: 121 VKAILYFAIAPTVFA 135