Miyakogusa Predicted Gene
- Lj5g3v0290460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0290460.1 Non Chatacterized Hit- tr|K4AJX8|K4AJX8_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,40.74,2e-18,DUF827,Protein of unknown function DUF827, plant;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY,CUFF.52734.1
(392 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26570.1 | Symbols: WEB1 | Plant protein of unknown function ... 213 2e-55
AT4G33390.1 | Symbols: | Plant protein of unknown function (DUF... 197 9e-51
AT5G42880.1 | Symbols: | Plant protein of unknown function (DUF... 164 9e-41
AT1G45545.1 | Symbols: | Plant protein of unknown function (DUF... 163 2e-40
AT2G40480.1 | Symbols: | Plant protein of unknown function (DUF... 50 4e-06
AT3G51720.1 | Symbols: | Plant protein of unknown function (DUF... 49 4e-06
>AT2G26570.1 | Symbols: WEB1 | Plant protein of unknown function
(DUF827) | chr2:11299565-11302076 FORWARD LENGTH=807
Length = 807
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 130/179 (72%), Gaps = 23/179 (12%)
Query: 237 INFPQTKITDVAAGVV----DSPTTAL-------------------RRGIIDTAAPFESV 273
I P KIT+ A G SP T RG+IDTAAPFESV
Sbjct: 115 IGLPSVKITEAATGTARNGGGSPRTVSSPRFSGSPVSTGTPKNVDSHRGLIDTAAPFESV 174
Query: 274 KEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEAAEHGKVQVLQELD 333
KEAVSKFGGI DWK+HR+Q VERRK +E+EL+K EEIPE++ SE AE K+QVL+EL+
Sbjct: 175 KEAVSKFGGITDWKSHRMQAVERRKLIEEELKKIHEEIPEYKTHSETAEAAKLQVLKELE 234
Query: 334 STKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHSSVAAKAQLEVAKAR 392
STKRLIE+LKLNL++AQTEE QA+QDSELAKLRVEEMEQGIA+ SVAAKAQLEVAKAR
Sbjct: 235 STKRLIEQLKLNLDKAQTEEQQAKQDSELAKLRVEEMEQGIAEDVSVAAKAQLEVAKAR 293
>AT4G33390.1 | Symbols: | Plant protein of unknown function
(DUF827) | chr4:16075282-16077706 FORWARD LENGTH=779
Length = 779
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 117/132 (88%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEA 320
R IDTA+PFESVKEAVSKFGGI DWKAHR++ +ERR VE+EL+K QEEIPE++K+SE
Sbjct: 153 RDSIDTASPFESVKEAVSKFGGITDWKAHRMKVLERRNFVEQELDKIQEEIPEYKKKSEM 212
Query: 321 AEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHSSV 380
E K+ ++EL+STKRLIEELKLNLE+A+TEE QA+QDSELAKLRV+EMEQGIAD +SV
Sbjct: 213 VEMSKMLAVEELESTKRLIEELKLNLEKAETEEQQAKQDSELAKLRVQEMEQGIADEASV 272
Query: 381 AAKAQLEVAKAR 392
A+KAQLEVA+AR
Sbjct: 273 ASKAQLEVAQAR 284
>AT5G42880.1 | Symbols: | Plant protein of unknown function
(DUF827) | chr5:17191758-17194091 FORWARD LENGTH=751
Length = 751
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 117/141 (82%)
Query: 252 VDSPTTALRRGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEI 311
V+SP G+IDTA+PFESV+EAVSKFGGI DWKAH+IQT+ERRK V++ELEK QE +
Sbjct: 122 VESPCFGSPIGVIDTASPFESVREAVSKFGGITDWKAHKIQTIERRKMVDEELEKIQEAM 181
Query: 312 PEFRKRSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEME 371
PE+++ +E AE K L+EL++TK LIEELKL LE+A+ EE QA+QDSELA++RVEEME
Sbjct: 182 PEYKREAELAEEAKYDALEELENTKGLIEELKLELEKAEKEEQQAKQDSELAQMRVEEME 241
Query: 372 QGIADHSSVAAKAQLEVAKAR 392
+G+A+ +SVA K QLEVAKAR
Sbjct: 242 KGVANEASVAVKTQLEVAKAR 262
>AT1G45545.1 | Symbols: | Plant protein of unknown function
(DUF827) | chr1:17180615-17182957 REVERSE LENGTH=752
Length = 752
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/139 (67%), Positives = 118/139 (84%), Gaps = 3/139 (2%)
Query: 254 SPTTALRRGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPE 313
SPT+ + +IDTAAPFESVKEAVSKFGGI DWKAH+IQT+ERRK V++ELEK QE++P+
Sbjct: 148 SPTSPV---LIDTAAPFESVKEAVSKFGGITDWKAHKIQTIERRKTVDQELEKIQEDMPD 204
Query: 314 FRKRSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQG 373
++K++ AE K QV+ EL+ T+ ++EELKL LE+A+ EE QA+QDS+LAKLRVEEMEQG
Sbjct: 205 YKKQAVVAEEAKHQVVMELERTRNVVEELKLELEKAEKEEQQAKQDSDLAKLRVEEMEQG 264
Query: 374 IADHSSVAAKAQLEVAKAR 392
IA SVAAK+QLEVAKAR
Sbjct: 265 IAGEVSVAAKSQLEVAKAR 283
>AT2G40480.1 | Symbols: | Plant protein of unknown function
(DUF827) | chr2:16910425-16912444 FORWARD LENGTH=518
Length = 518
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEA 320
R IDT+ PF SV+EAV++FGG W ++ E ++++ +E E K
Sbjct: 56 RAEIDTSPPFGSVQEAVTRFGGRGYWVPFKLDDT---FNGEFDIKRMEEHAAELEKDLIV 112
Query: 321 AEHGKVQVLQELDSTKRLIEELKLNLER 348
E + VL+ L STKR++E+LK L++
Sbjct: 113 KELETLDVLEALGSTKRIVEDLKRQLQQ 140
>AT3G51720.1 | Symbols: | Plant protein of unknown function
(DUF827) | chr3:19185119-19186518 FORWARD LENGTH=407
Length = 407
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
Query: 262 GIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEAA 321
G IDT+APFESV+EA ++FGG WK + E +Q E+ K SE
Sbjct: 11 GEIDTSAPFESVREAATRFGGFGFWKPSSLNIS----------EASQNEVGMVLKASELE 60
Query: 322 EHGK------VQVLQELDSTKRLIEELK 343
+ ++VL+ L+STK ++EELK
Sbjct: 61 KELIEKEGETLKVLKSLESTKAIVEELK 88