Miyakogusa Predicted Gene

Lj5g3v0290430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0290430.1 Non Chatacterized Hit- tr|A5B8Y6|A5B8Y6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.62,0.000000000000002,(Trans)glycosidases,Glycoside hydrolase,
superfamily; Glycosyl hydrolase domain,NULL; Alpha-amylase
,CUFF.52731.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25000.1 | Symbols: ATAMY1, AMY1 | alpha-amylase-like | chr4:...   273   7e-74
AT1G76130.1 | Symbols: ATAMY2, AMY2 | alpha-amylase-like 2 | chr...   189   1e-48
AT1G69830.1 | Symbols: ATAMY3, AMY3 | alpha-amylase-like 3 | chr...   166   7e-42

>AT4G25000.1 | Symbols: ATAMY1, AMY1 | alpha-amylase-like |
           chr4:12852109-12853825 REVERSE LENGTH=423
          Length = 423

 Score =  273 bits (697), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 132/205 (64%), Positives = 162/205 (79%), Gaps = 3/205 (1%)

Query: 2   VVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAV- 60
           V GYA   TK+Y++ TSPDFAVGE + ++  G DG+   +Q++HRS L +W+++AGG V 
Sbjct: 205 VRGYASSITKLYVQNTSPDFAVGEKWDDMKYGGDGKLDYDQNEHRSGLKQWIEEAGGGVL 264

Query: 61  TAFDFTTKMVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWSQRTWPFPDD 120
           TAFDFTTK +L +AV+GELWR+KD+ GKPPGMIG  P NAVTF+DNHDT+  RTW FP D
Sbjct: 265 TAFDFTTKGILQSAVKGELWRLKDSQGKPPGMIGIMPGNAVTFIDNHDTF--RTWVFPSD 322

Query: 121 KVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEADLY 180
           KV+LGYVYILTHPG P IFY+HYIEWGL E I KL  IR +NGI  TS+V I AAEADLY
Sbjct: 323 KVLLGYVYILTHPGTPCIFYNHYIEWGLKESISKLVAIRNKNGIGSTSSVTIKAAEADLY 382

Query: 181 MAEIDNKIITKIGPKQDLGNLLPPN 205
           +A ID+K+I KIGPKQD+G L+P N
Sbjct: 383 LAMIDDKVIMKIGPKQDVGTLVPSN 407


>AT1G76130.1 | Symbols: ATAMY2, AMY2 | alpha-amylase-like 2 |
           chr1:28561647-28563914 FORWARD LENGTH=413
          Length = 413

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 122/193 (63%), Gaps = 4/193 (2%)

Query: 4   GYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAVTAF 63
           GY+  + K Y+    P F+VGE + +      G    NQD HR  ++ W+D  G    AF
Sbjct: 197 GYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDY-NQDSHRQRIISWIDATGQISAAF 255

Query: 64  DFTTKMVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFPDDKV 122
           DFTTK +L  AV+G+ WR+ DA GKPPG++G  PS AVTF+DNHDT S Q  WPFP   V
Sbjct: 256 DFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSHHV 315

Query: 123 MLGYVYILTHPGHPTIFYDHYIEWG--LMEPIKKLTEIRKRNGIKPTSTVNILAAEADLY 180
           M GY YILTHPG P +FYDH+ +WG  + + I KL +IR+R  I   STV +L AE++LY
Sbjct: 316 MEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQDIHSRSTVRVLKAESNLY 375

Query: 181 MAEIDNKIITKIG 193
            A +  KI  K+G
Sbjct: 376 AAIVGEKICMKLG 388


>AT1G69830.1 | Symbols: ATAMY3, AMY3 | alpha-amylase-like 3 |
           chr1:26288518-26293003 REVERSE LENGTH=887
          Length = 887

 Score =  166 bits (421), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 120/207 (57%), Gaps = 8/207 (3%)

Query: 1   MVVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAV 60
            V G+   + K YM+ + P FAVGE + +++    G    NQD HR  +V W++   GA 
Sbjct: 667 FVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATSGAA 725

Query: 61  TAFDFTTKMVLGAAVQ-GELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFP 118
            AFD TTK +L  A+Q  E WR+ D  GKPPG++G  PS AVTF++NHDT S Q  W FP
Sbjct: 726 GAFDVTTKGILHTALQKCEYWRLSDPKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFP 785

Query: 119 DDKVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEAD 178
           + K M GY YILTHPG P +F+DH         I  L  +R R  +   S VNI  +E D
Sbjct: 786 EGKEMQGYAYILTHPGTPAVFFDHIFS-DYHSEIAALLSLRNRQKLHCRSEVNIDKSERD 844

Query: 179 LYMAEIDNKIITKIGPKQDLGNLLPPN 205
           +Y A ID K+  KIGP    G+  PPN
Sbjct: 845 VYAAIIDEKVAMKIGP----GHYEPPN 867