Miyakogusa Predicted Gene
- Lj5g3v0279370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0279370.1 tr|A9RQM0|A9RQM0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_177326,24.36,3e-18,seg,NULL; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide
repe,CUFF.52718.1
(644 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 3e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 8e-37
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 149 4e-36
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 148 9e-36
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 4e-35
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 139 7e-33
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 5e-31
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 6e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 9e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 127 3e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 3e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 126 4e-29
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 7e-28
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 9e-28
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 5e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 7e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 1e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 118 1e-26
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 3e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 115 9e-26
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 115 1e-25
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 3e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 110 4e-24
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 8e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 105 1e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 101 2e-21
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 100 2e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 2e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 98 2e-20
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 97 4e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 94 2e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 84 3e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 80 6e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 77 3e-14
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 4e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 2e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 74 3e-13
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 74 3e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 73 7e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 8e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 8e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 9e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 72 1e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 72 2e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 72 2e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 71 3e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 70 5e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 68 3e-11
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 3e-11
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 66 8e-11
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 66 1e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 64 4e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 7e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 63 8e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 62 1e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 60 3e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 60 4e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 5e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 60 6e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 57 3e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 57 4e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 56 6e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 56 9e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 2e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 3e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 4e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 54 4e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 52 2e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 51 3e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 296/533 (55%), Gaps = 10/533 (1%)
Query: 30 TVTAPVSYSYSYSSETKRENVRSSDLIALSCFFW-SSQRRRDHQSVTVDHMVPVLGRLTR 88
T P+++ YS RE+ +DL L+ FFW + Q H DHMV V+ +LTR
Sbjct: 32 TAAKPLTHDNVYS--CLRES--PADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTR 87
Query: 89 RHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFA 148
+ ++ I+ +L+ GC + P FLLLL I WR ++ + Y M S+GFVPNT A
Sbjct: 88 EYYSIDRIIERLKISGCEI--KPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRA 145
Query: 149 RNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX--XXXXXXXXKRMLR 206
N+ MD +F++ ++ AL +F+ I+ NFF+FDI L H + KRM+
Sbjct: 146 MNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIG 205
Query: 207 MHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDV 266
+YPN F +L + + EA+Q++GLM+ GI SVNVW++L+ + G
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQK 265
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
A L M+ GCSPN+VTYT+LIK +++ V +A + + ++S G PD+VL N++I
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDL 386
+++ GR ++A VF SL K+ + PD YT S LS +C S FDL+P D DL
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG-TDFDL 384
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
V N L + K G+ S A + +M FA D Y++ V LSALC G A+K+Y+
Sbjct: 385 VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKI 444
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
+ + DA H+ II LI+ GKY A +FK+ ++ KYPLD V+Y V I L+R+ R
Sbjct: 445 IIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKR 504
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
+A + MKE G+ PN T ++ KEK+ +KV ++L+E I +EL
Sbjct: 505 IEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVEL 557
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/310 (17%), Positives = 119/310 (38%), Gaps = 34/310 (10%)
Query: 268 NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
+++++ + +GC + L++ + + A ++ M S G P+ N+++D
Sbjct: 93 DRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDV 152
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLV 387
+ K AL +F + +N ++ LS C R DLV
Sbjct: 153 NFKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCS--------------RGGRGDLV 194
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
+L MI GF P++ F +L C G + EA +V
Sbjct: 195 GVKIVLKR----------------MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLM 238
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+ S + ++++ ++G+ A +F + + + V Y I + G
Sbjct: 239 ICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMV 298
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
+A T +++ GL P+ CN+M+ T+ + ++ ++ + ++ F ++
Sbjct: 299 DEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASI 358
Query: 568 CNFPCRSDAY 577
+ C S +
Sbjct: 359 LSSLCLSGKF 368
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 238/549 (43%), Gaps = 28/549 (5%)
Query: 60 CFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNP----NSFL 115
C FW RD V D+ + RL K A+ L G ++ P F
Sbjct: 35 CSFWV----RDFSGVRYDYRKISINRLNDL-KLDDAVNL----FGDMVKSRPFPSIVEFS 85
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
LL + + + QMQ+ G N + ++ ++ R L LAL V ++
Sbjct: 86 KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL 145
Query: 176 NFFTFDITLFHLSNX---XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+ +TL L N +M+ M Y P++ TF++L++ F+ + EA
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
L+ MVV G Q + + I+++ C+ G +D+A LL+ M P VV Y T+I A
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
V DA NLF M + G P++V +N LI C GR DA + + ++ I P+
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 353 PYTLTSWLS-------MICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
T ++ + ++ +++D ++ R IDPD+ ++L++ +A
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYD-----EMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
++LMI P+ ++ L+ C A ++ E ++++R + +T +I
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
+A + A VFKQ V D + Y++ + L +G+ A ++ ++ + ++P+
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLA 585
+T N+M+ K ++ + + ++ + + + + CR L
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 586 EMREMGLLP 594
EM+E G LP
Sbjct: 561 EMKEEGPLP 569
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 174/405 (42%), Gaps = 18/405 (4%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ +++ L + G + +M+ P N +DA N++ AL +F ++
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 173 QP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
PN T++ + L N M+ PN TF +L++AF K
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD-MIERKINPNVVTFSALIDAFVKEGK 341
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
L+EA +L M+ I + ++ LI+ C LD A + + M+ C PNVVTY T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LIK + ++ RV + LF M G + V + LI +A +A VF+ +
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALV-FRYI-----DPDLVFCNALLSYLVKAGHP 402
+ PD T + L +C + E ALV F Y+ +PD+ N ++ + KAG
Sbjct: 462 VLPDIMTYSILLDGLCNNGKV----ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
D + + + G P+ ++ ++S C G EA ++R D+ + +
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA-LLRSGR 506
I ++ G +A + ++ ++ D A +G+ +L GR
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRFVGD--ASTIGLVTNMLHDGR 620
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 95/250 (38%), Gaps = 8/250 (3%)
Query: 126 MHAMFFQAYHQ---MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFF 178
MH +A H M S PN N + + + + +F+++ N
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
T+ TL H K+M+ P+ T+ LL+ + A +
Sbjct: 433 TY-TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
+ ++ + + I+I C+ G ++ L ++ G PNVVTYTT++ +
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
+A LF M+ G PD +N LI H + G + + R + D T+
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 611
Query: 359 WLSMICQSRM 368
+M+ R+
Sbjct: 612 VTNMLHDGRL 621
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 172/391 (43%), Gaps = 33/391 (8%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+ P A + SL+ + + + + Y+LL M I S + ++ C G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A +++ M+ +GC PNVV YTTLIK +++++R DA + M+ G PD+ +N
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
LI SKA R +A + + ++P+ +T
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY--------------------------- 525
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
A +S ++A + A ++ M E G P+K L++ C GK+ EA
Sbjct: 526 ------GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
YR V DA+ +TV++ L K K A +F++ + D +Y V I +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
G A + +D+M E GL PN NM+L F + +++K ++L EM + +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 564 FLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + + C+S L EM+ GL+P
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 183/435 (42%), Gaps = 21/435 (4%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSN---XXX 192
+M G PN F F+ + A ++++ + L N
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 193 XXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
+ M+ +A T+ L+N FK D + +A ++ M GI V +
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
+LI+ +LG + A+ + M+ G +PNV+ Y L+ + S + A L + M
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
G P+ V + +ID + K+G +A +F + + + PD + T+ + C R+ D+
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC--RLNDV- 748
Query: 373 PEPALVF-----RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF----APDKYS 423
E A+ + NAL++++ K G E + +++ F P+ +
Sbjct: 749 -ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
+ +++ LC G + A +++ ++ +T ++ K G+ VF +A+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 484 VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM-----KENGLKPNAHTCNMMLFTFYK 538
D++ Y+V I A L+ G T A DQM ++G K + TC +L F K
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 539 EKDLQKVNQMLKEMI 553
+++ ++++ M+
Sbjct: 928 VGEMEVAEKVMENMV 942
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 191/487 (39%), Gaps = 16/487 (3%)
Query: 120 ILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNF-- 177
++ + G+ + M + G +P A ++ + R N+ + +++ N
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 178 --FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
+T+ + + + K M+ PN + +L+ F + +A ++
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIV-KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
L M GI + + LI + +D A L M+ G PN TY I Y+E
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
++ A MR G P+ VL LI+ + K G+ +A +RS+ Q I D T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYD 410
T ++ + ++ D E +FR I PD+ L++ K G+ A+ +D
Sbjct: 595 YTVLMNGLFKNDKVDDAEE---IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 411 LMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAG 470
M+E G P+ + +LL C +G+I +A ++ + +A + II K+G
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 471 KYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCN 530
A +F + ++ D+ Y + R A T + K+ A
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 531 MMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN---LCNFPCRSDAYYSTSNLLAEM 587
++ + F K K + + M GS N + + ++ C+ + L +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 588 REMGLLP 594
+ L+P
Sbjct: 832 QNANLMP 838
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 29/374 (7%)
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
+ + P + LL+A + + L + + MV + F V + +LI HC+ G +
Sbjct: 178 MGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV 237
Query: 265 ---------------------DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDAS 303
D A KL ++M+ G P TY LI + R+ DA
Sbjct: 238 QLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 304 NLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL-GVFRSLSKQNIQPDPYTLTSWLSM 362
+L M S G + D +++LID K GR+ DA G+ + I PY + +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 363 ICQSRMFDLLPEPALVFRYIDPDLV-FCNALLSYLVKAGHPSDAAEFYDLMIEL---GFA 418
+ + + + AL I L+ A S + + + Y+L++E+
Sbjct: 357 MSKEGVME--KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
Y++ ++ +C++G + A + + + S + I+T +I ++ ++ A V
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
K+ + D Y I L ++ R +A +F +M ENGLKPNA T + + +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 539 EKDLQKVNQMLKEM 552
+ ++ +KEM
Sbjct: 535 ASEFASADKYVKEM 548
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 126/318 (39%), Gaps = 12/318 (3%)
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
G S + V + L Y+ + +A +F+ P L VL+D + R
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYL 396
V++ + ++N+ D T + C++ L + ++F+ + F A L
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD--VLFK---TEKEFRTATL--- 256
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
+ A + + MI G P KY++ VL+ LC ++ +A + D
Sbjct: 257 ----NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
++++I L+K A + + V + Y IC + + G A +D
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDA 576
M +GL P A ++ + +EK++++ ++L EM I +S + + C S
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 577 YYSTSNLLAEMREMGLLP 594
N++ EM G P
Sbjct: 433 LDGAYNIVKEMIASGCRP 450
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 212/470 (45%), Gaps = 15/470 (3%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
+MQ+ + ++ N+ ++ R L LAL V ++ + +TL L N
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M M Y PN TF++L++ F + EA L+ MV G Q + +
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+++ C+ G +D+A LL+ M +VV YTT+I A V DA NLF M +
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS-------MIC 364
G P++V +N LI C GR DA + + ++ I P+ T ++ + ++
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 365 QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+++D ++ R IDPD+ ++L++ +A ++LMI P+ ++
Sbjct: 344 AEKLYD-----EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
L+ C A ++ E ++++R + + +I L +AG MA +FK+ V
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
P D + Y++ + L + G+ A ++ ++++ ++P+ +T N+M+ K ++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + ++ + + + + CR L EM+E G LP
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 150/339 (44%), Gaps = 13/339 (3%)
Query: 152 FMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRM 207
+DA N++ AL +F ++ PN T++ + L N M+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD-MIER 319
Query: 208 HYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA 267
PN TF +L++AF K L+EA +L M+ I + ++ LI+ C LD A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 268 NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
+ + M+ C PNVVTY TLIK + ++ RV + LF M G + V +N LI
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI----- 382
+AG A +F+ + + PD T + L +C+ + L + +VF Y+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK---YGKLEKALVVFEYLQKSKM 496
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
+PD+ N ++ + KAG D + + + G P+ + ++S C G EA
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ 481
++R ++ + +I ++ G +A + K+
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 167/395 (42%), Gaps = 43/395 (10%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
M++ P+ F+ LL+A KM+ L M L I + + + ILI+ C+
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
L +A +L M+ G P++VT ++L+ Y R+++A L + M + P+ V +N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 323 VLID---CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL-------- 371
LI H+KA +A+ + + + QPD +T + ++ +C+ DL
Sbjct: 190 TLIHGLFLHNKA---SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 372 ----LPEPALVF-------------------------RYIDPDLVFCNALLSYLVKAGHP 402
+ +++ + I P++V N+L+ L G
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
SDA+ MIE P+ +F+ L+ A GK+ EA K+Y + S + D ++ +
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
I + A +F+ + + + V Y I ++ R + + +M + GL
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
N T N ++ ++ D ++ K+M+ +
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 134/315 (42%), Gaps = 4/315 (1%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A L M+ + P++V + L+ A + N+ +L M++ + DL +N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD---LLPEPALVFR 380
LI+C + + AL V + K +PD TL+S L+ C + L + V
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
Y P+ V N L+ L S+A D M+ G PD +++ +++ LC G I A
Sbjct: 181 Y-QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
+ + + E D I+T II L A +F + + + V Y I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
L GR DA M E + PN T + ++ F KE L + ++ EMI I+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 561 DRNFLNLCNFPCRSD 575
+ +L N C D
Sbjct: 360 IFTYSSLINGFCMHD 374
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 5/199 (2%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHL 187
+ + +M G V NT N + F+ G+ +A +F+++ PP+ T+ I L L
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 188 SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
+ + + P+ T++ ++ K + + + L + + G++ +
Sbjct: 476 CKYGKLEKALVVF-EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
V ++T +I C+ G+ + A+ L + M G PN TY TLI+A + ++ L
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 308 HMRSAGHTPDLVLWNVLID 326
MRS G D +++I+
Sbjct: 595 EMRSCGFVGDASTISMVIN 613
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 207/470 (44%), Gaps = 15/470 (3%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
QMQ+ G N + ++ ++ R L LAL V ++ + +TL L N
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M Y PN TF++L++ F + EA L+ MV G Q + +
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
++++ C+ G D+A LL M P V+ Y T+I + + DA NLF M +
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS-------MIC 364
G P++V ++ LI C GR DA + + ++ I PD +T ++ + ++
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 365 QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+++D +V R IDP +V ++L++ +A + ++ M+ PD ++
Sbjct: 345 AEKLYD-----EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
L+ C ++ E ++V+R + + ++I L +AG MA +FK+ V
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
P + + Y + L ++G+ A ++ ++ + ++P +T N+M+ K ++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + ++ + + + CR + L EM+E G LP
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 188/424 (44%), Gaps = 22/424 (5%)
Query: 95 AILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLF 152
A++ ++ + GC P+ ++ +++ L + G + F ++M+ P N
Sbjct: 207 ALIDRMVAKGC----QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 153 MDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH 208
+D + ++ AL +F++++ PN T+ + L N M+
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD-MIERK 321
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
P+ TF +L++AF K L+EA +L MV I S+ ++ LI+ C LD A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
++ + M+ C P+VVTY TLIK + + RV + +F M G + V +N+LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-----D 383
+AG A +F+ + + P+ T + L +C++ L + +VF Y+ +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK---LEKAMVVFEYLQRSKME 498
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P + N ++ + KAG D + + + G PD ++ ++S C G EA +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA-LL 502
++ ++ + +I ++ G +A + K+ +R A +G+ +L
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE--MRSCGFAGDASTIGLVTNML 616
Query: 503 RSGR 506
GR
Sbjct: 617 HDGR 620
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 174/395 (44%), Gaps = 43/395 (10%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
M++ +P+ F LL+A KM+ L M LGI + ++ILI+ C+
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
L +A +L M+ G PN+VT ++L+ Y S R+++A L + M G+ P+ V +N
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 323 VLID---CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLP-- 373
LI H+KA +A+ + + + QPD T ++ +C+ F+LL
Sbjct: 191 TLIHGLFLHNKA---SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 374 -----EPALV-----------FRYID---------------PDLVFCNALLSYLVKAGHP 402
EP ++ ++++D P++V ++L+S L G
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
SDA+ MIE PD ++F+ L+ A GK+ EA K+Y V S + ++ +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
I + A +F+ V + D V Y I + R + + +M + GL
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
N T N+++ ++ D ++ KEM+ +
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 91/237 (38%), Gaps = 32/237 (13%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXX 191
+ + +M G V NT N+ + F+ G+ +A +F
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF---------------------- 454
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
K M+ PN T+++LL+ K L +A + + ++ ++ +
Sbjct: 455 ----------KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
I+I C+ G ++ L N+ G P+VV Y T+I + +A LF M+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
G P+ +N LI + G + + + + + D T+ +M+ R+
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 621
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 126/332 (37%), Gaps = 33/332 (9%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A L M+ + P+++ ++ L+ A + N+ +L M++ G + +++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
LI+C + + AL V + K +P+ TL+S L+ C S+
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI-------------- 167
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
S+A D M G+ P+ +F L+ L K EA+ +
Sbjct: 168 -------------------SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
V + D + V++ L K G +A + + K + Y I L +
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
DA + +M+ G++PN T + ++ +++L +MI +I
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 564 FLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA 595
F L + + L EM + + P+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/544 (22%), Positives = 236/544 (43%), Gaps = 61/544 (11%)
Query: 110 NPNSFL--LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
+PN F +L+R AG + + +M++ G +PN N +D + ++ +
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 168 VFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+ + + PN ++++ + L + M R Y + T+++L+ +
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE-MNRRGYSLDEVTYNTLIKGY 320
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
K +A + M+ G+ SV +T LIH C+ G ++ A + L M G PN
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
TYTTL+ + + + +A + M G +P +V +N LI+ H G+ +DA+ V
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
+ ++ + PD + ++ LS C+S D L + +V + I PD + ++L+ +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY----RGGVM-------- 449
+A + Y+ M+ +G PD++++ L++A C G + +A++++ GV+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 450 ------------------------SSQETDARIHTVI----------IVELIKA----GK 471
S +D HT+I +V LIK G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
A VF+ + + + D AY + I R+G A T Y +M ++G + T
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN-LCNFPCRSDAYYSTSNLLAEMREM 590
++ +KE + ++N ++ ++ S ELS+ L R ++LAEM +
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLRS-CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739
Query: 591 GLLP 594
G LP
Sbjct: 740 GFLP 743
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 191/450 (42%), Gaps = 49/450 (10%)
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIG-NLHLALTVFQQI 172
F L+++ R + H Q++GF+P + N +DA R N+ A VF+++
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 173 ----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
PN FT++I + +M PN T+++L++ + K+
Sbjct: 197 LESQVSPNVFTYNILIRGFC-FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+ + ++LL M + G++ ++ + ++I+ C+ G + + +L M G S + VTY T
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LIK Y + A + M G TP ++ + LI KAG A+ + +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPS 403
+ P+ T T+ + Q + E V R ++ P +V NAL++ G
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMN---EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
DA + M E G +PD S++ +LS C + + EA++V R
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR------------------ 474
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
E+++ G D + Y+ I RT +AC Y++M GL
Sbjct: 475 -EMVEKG----------------IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
P+ T ++ + E DL+K Q+ EM+
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 4/354 (1%)
Query: 245 QFSVNVWT--ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
Q S NV+T ILI C G +DVA L M GC PNVVTY TLI Y + ++ D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
L M G P+L+ +NV+I+ + GR ++ V ++++ D T + +
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 363 ICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
C+ F L+ ++ + P ++ +L+ + KAG+ + A EF D M G P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
+ ++ L+ G + EA +V R + + +I GK A V +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
+ D V+Y+ + RS +A +M E G+KP+ T + ++ F +++
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 541 DLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ + +EM+ + + + L N C L EM E G+LP
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 146/334 (43%), Gaps = 10/334 (2%)
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
A + + ML + SPNV TY LI+ + + + A LF+ M + G P++V +N LID
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVF-----R 380
+ K + D + RS++ + ++P+ + ++ +C + RM E + V R
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM----KEVSFVLTEMNRR 304
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
D V N L+ K G+ A + M+ G P ++ L+ ++C AG + A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
++ + + R +T ++ + G A V ++ + V Y I
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
+G+ DA + MKE GL P+ + + +L F + D+ + ++ +EM+ I+
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ +L C +L EM +GL P
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 157/379 (41%), Gaps = 25/379 (6%)
Query: 94 QAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFM 153
QA+++ E + LT + ++ L+ + +AG + QM+ G PN +
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 154 DAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSN---XXXXXXXXXXXXKRMLRMHYY 210
D + G ++ A V +++ F +T L N + M
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ ++ ++L+ F + + EA ++ MV GI+ ++ LI C+ A L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ ML G P+ TYT LI AY + A L N M G PD+V ++VLI+ +K
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCN 390
R ++A + L + P T + + C + F +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVV----------------- 609
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
+L+ G ++A + ++ M+ PD ++ +++ C AG I +A +Y+ V S
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 451 SQETDARIHTVIIVELIKA 469
+HTV ++ L+KA
Sbjct: 670 G----FLLHTVTVIALVKA 684
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX 193
Y +M G P+ F ++A+ G+L AL + ++ +T L N
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 194 XXXXXXXXKRMLRMHY---YPNANTFHSLLN-----AFFKMDALLEAYQLLGLMV----- 240
+ +L++ Y P+ T+H+L+ F + +L++ + + G+M
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 241 ---VLGIQFSVN--VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
+LG + + I+IH HC+ G + A L + M+ +G + VT L+KA +
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+V + +++ H+ + + VL++ + + G L V ++K P+
Sbjct: 688 EGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 215/526 (40%), Gaps = 42/526 (7%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
NP+ + +L+R+ R GM + + M YGF P+ + N + + + G +
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 170 QQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
+++ P+ TF+I L ++ ++M + Y P T++++L+ + K
Sbjct: 222 KEMLKRKICPDVATFNI-LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
A +LL M G+ V + +LIH C+ + LL++M PN VT
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y TLI + +V AS L N M S G +P+ V +N LID H G ++AL +F +
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDL--------------------------------LP 373
+ + P + L +C++ FDL L
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 374 EPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
E ++ IDPD+V +AL++ K G A E + +G +P+ ++ L+
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
C G + EA+++Y ++ D V++ L KAGK A +
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
+ V++ I SG A + +D+M + G P T +L K L++ +
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 549 LKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
LK + + + L C+S +L EM + +LP
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 12/430 (2%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHL 187
Q ++M S+G PN N +D H GN AL +F ++ P+ ++ + L L
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 188 SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
RM R T+ +++ K L EA LL M GI
Sbjct: 419 CKNAEFDLARGFYM-RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
+ ++ LI+ C++G A +++ + G SPN + Y+TLI + +A ++
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS- 366
M GHT D +NVL+ KAG+ +A R ++ I P+ + ++ S
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 367 ---RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
+ F + E V + P +LL L K GH +A +F + + A D
Sbjct: 598 EGLKAFSVFDEMTKVGHH--PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
+ LL+A+C +G + +AV ++ V S D+ +T +I L + GK ++A K+A
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 484 VRKYPLDN-VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
R L N V Y + + ++G+ F +QM G P+ T N M+ + + +
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 543 QKVNQMLKEM 552
+K N +L EM
Sbjct: 776 EKTNDLLPEM 785
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 182/448 (40%), Gaps = 49/448 (10%)
Query: 108 TKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
T++ +F +L+ L +AG A + M S G +PNT + + ++ + G A +
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 168 VFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANT---FHSLL 220
VF ++ P FFT+ L L K + +H P A +++LL
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----KFLKSLHAVPAAVDTVMYNTLL 660
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA------------- 267
A K L +A L G MV I +T LI C+ G +A
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 268 --NKLL---------------------QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
NK++ + M + G +P++VT +I Y ++ ++
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
L M + P+L +N+L+ +SK + ++RS+ I PD T S + IC
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 365 QSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+S M ++ + A + R ++ D N L+S G + A + +M LG + DK
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
+ ++S L + E+ V ++R + +I L + G A V ++
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ K NVA + + AL + G+ +A
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEA 988
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 150/392 (38%), Gaps = 68/392 (17%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
+ P+ T +++L + K + + L M+ I V + ILI+ C G + ++
Sbjct: 194 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 253
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
L+Q M +G +P +VTY T++ Y + R A L +HM+S G D+ +N+LI
Sbjct: 254 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVF 388
++ R + R + K+ I P+ T
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTY-------------------------------- 341
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
N L++ G A++ + M+ G +P+ +F L+ + G EA+K++
Sbjct: 342 -NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF---- 396
Query: 449 MSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTP 508
Y+M A + V+Y V + L ++
Sbjct: 397 -----------------------YMMEA--------KGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 509 DACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLC 568
A FY +MK NG+ T M+ K L + +L EM I+ + L
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 569 NFPCRSDAYYSTSNLLAEMREMGLLPAKALHA 600
N C+ + + ++ + +GL P +++
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 172/453 (37%), Gaps = 84/453 (18%)
Query: 86 LTRRHKTLQAILL--QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
L R+ KT+ AIL + E+ G +L N + + +++AG QM + G
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLP-NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 756
Query: 144 PNTFARNLFMDAHFRIGNLH----LALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXX 199
P+ N +D + R+G + L + Q PN T++I L H +
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI-LLHGYSKRKDVSTSFL 815
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
+ ++ P+ T HSL VLGI C
Sbjct: 816 LYRSIILNGILPDKLTCHSL---------------------VLGI--------------C 840
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ +L++ K+L+ + G + T+ LI + + A +L M S G + D
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL----LPEP 375
+ ++ ++ R Q++ V +SKQ I P+ ++ +C R+ D+ + +
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC--RVGDIKTAFVVKE 958
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
++ I P V +A++ L K G +A M+++ P SF L+ C G
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 1018
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
+ EA+++ + +M+ K LD V+Y
Sbjct: 1019 NVIEALEL---------------------------RVVMSNCGLK--------LDLVSYN 1043
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
V I L G A Y++MK +G NA T
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATT 1076
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 189/440 (42%), Gaps = 39/440 (8%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ-PP 175
L+R R G + ++ G VP+ N+ + + + G ++ AL+V ++ P
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
+ T++ L L + RML+ YP+ T+ L+ A + + A +L
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVL-DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
L M G V + +L++ C+ G LD A K L +M +GC PNV+T+ ++++
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ R DA L M G +P +V +N+LI+ + G A+ + + + QP+ +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
L C+ + D A E+ + M+
Sbjct: 382 YNPLLHGFCKEKKMD---------------------------------RAIEYLERMVSR 408
Query: 416 GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT--VIIVELIKAGKYL 473
G PD ++ +L+ALC GK+ +AV++ +SS+ + T +I L KAGK
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILN--QLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 474 MAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
A + + + D + Y+ + L R G+ +A F+ + + G++PNA T N ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 534 FTFYKEKDLQKVNQMLKEMI 553
K + + L MI
Sbjct: 527 LGLCKSRQTDRAIDFLVFMI 546
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 17/327 (5%)
Query: 127 HAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDI 182
HAM + +M+ G P+ N+ ++ + G L A+ + PN T +I
Sbjct: 257 HAM--KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 183 TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVL 242
L + + MLR + P+ TF+ L+N + L A +L M
Sbjct: 315 ILRSMCSTGRWMDAEKLLAD-MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G Q + + L+H C+ +D A + L+ M+ GC P++VTY T++ A + +V DA
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
+ N + S G +P L+ +N +ID +KAG+ A+ + + ++++PD T +S +
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 363 ICQSRMFDLLPEPALVFRY------IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
+ + D A+ F + I P+ V N+++ L K+ A +F MI G
Sbjct: 494 LSREGKVD----EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 417 FAPDKYSFAVLLSALCAAGKIYEAVKV 443
P++ S+ +L+ L G EA+++
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALEL 576
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 5/296 (1%)
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G L+ K L+NM++ G P+++ TTLI+ + + A+ + + +G PD++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PAL 377
+NV+I + KAG +AL V L + ++ PD T + L +C S E +
Sbjct: 174 TYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ R PD++ L+ + A + D M + G PD ++ VL++ +C G++
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
EA+K S + + H +I+ + G+++ A + + + + V + +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
I L R G A ++M ++G +PN+ + N +L F KEK + + + L+ M+
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 186/395 (47%), Gaps = 6/395 (1%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ +P+ F+ LL+A K+ L M VLGI+ + + I+I+ C
Sbjct: 76 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ 135
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+ +A +L ML G P+ VT +L+ + NRV+DA +L + M G+ PD+V +N
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALVF 379
+ID K R DA F+ + ++ I+P+ T T+ ++ +C S + LL + ++
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD--MIK 253
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
+ I P+++ +ALL VK G +A E ++ M+ + PD +++ L++ LC +I E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A +++ V D + +I KA + +F++ R + V Y I
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
++G A F+ QM G+ P+ T N++L +L+K + ++M ++L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 560 SDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + C++ +L + GL P
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 163/363 (44%), Gaps = 37/363 (10%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+ML++ Y P+ T SL+N F + + + +A L+ MV +G + + + +I C+
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
++ A + + G PNVVTYT L+ S+R +DA+ L + M TP+++ ++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-------QSRMFDLLPEP 375
L+D K G+ +A +F + + +I PD T +S ++ +C ++MFDL+
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 376 ALVFRYIDPDLV---FC---------------------------NALLSYLVKAGHPSDA 405
+ + + + FC N L+ +AG A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
EF+ M G +PD +++ +LL LC G++ +A+ ++ + D +T +I
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
+ K GK A ++F ++ D V Y + L G + Y +MK+ GL N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 526 AHT 528
T
Sbjct: 505 DCT 507
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 145/377 (38%), Gaps = 77/377 (20%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNX 190
+M G+ P+ A N +D+ + ++ A F++I+ PN T+ + L N
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
M++ PN T+ +LL+AF K +LEA +L MV + I +
Sbjct: 239 SRWSDAARLLSD-MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGC------------------------------- 279
++ LI+ C +D AN++ M+ GC
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 280 ----SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
N VTY TLI+ + ++ V A F+ M G +PD+ +N+L+ G +
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSY 395
AL +F + K+ + D T T+ + +C
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMC------------------------------- 446
Query: 396 LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY----RGGVMSS 451
K G +A + + G PD ++ ++S LC G ++E +Y + G+M +
Sbjct: 447 --KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 452 QETDARIHTVIIVELIK 468
T + + ELIK
Sbjct: 505 DCTLSDGDITLSAELIK 521
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 137/294 (46%), Gaps = 8/294 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L+ A L +M+ + P++V + L+ A ++ + +L M G DL +N+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRYI 382
+I+C + AL + + K +PD T+ S ++ C ++R+ D + +LV + +
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV---SLVDKMV 182
Query: 383 D----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ PD+V NA++ L K +DA +F+ + G P+ ++ L++ LC + +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+A ++ + + ++ ++ +K GK L A +F++ V D V Y+ I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
L R +A +D M G + + N ++ F K K ++ ++ +EM
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 212/480 (44%), Gaps = 15/480 (3%)
Query: 72 QSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNP-NSFLLLLRILWRAGMHAMF 130
SV ++ L + R ++ LQ +L ++ +GC+ N +L L R A
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQ-LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA-- 307
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX 190
+ ++M GF P+ M+ +IG + A +F +I P F+ +
Sbjct: 308 -KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
+ P+ T++SL+ ++K + A ++L M G + +V
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+TIL+ C+LG +D A +L M G PN V + LI A+ + +R+ +A +F M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM------IC 364
G PD+ +N LI + + AL + R + + + + T + ++ I
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 365 QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
++R L+ E +VF+ D + N+L+ L +AG A ++ M+ G AP S
Sbjct: 547 EAR--KLVNE--MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
+L++ LC +G + EAV+ + V+ D +I L +AG+ T+F++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
P D V + + L + G DAC D+ E+G PN T +++L + ++ L +
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 215/493 (43%), Gaps = 20/493 (4%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
S+ ++L IL H + ++ M S P F + M A + + AL++ + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 173 QP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
PN + TL H + + M M P+A TF+ ++ K D
Sbjct: 244 TKHGCVPNSVIYQ-TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+ EA +++ M++ G + L++ C++G +D A L + P +V + T
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358
Query: 289 LIKAYMESNRVTDASNLFNHM-RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
LI ++ R+ DA + + M S G PD+ +N LI + K G AL V + +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 348 NIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPS 403
+P+ Y+ T + C+ +++L E + + P+ V N L+S K
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNE--MSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
+A E + M G PD Y+F L+S LC +I A+ + R + + + +I
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
++ G+ A + + V + PLD + Y I L R+G A + +++M +G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMI--GSRIELSDRNFLNLCNFPCRSDAYYSTS 581
P+ +CN+++ + +++ + KEM+ GS ++ F +L N CR+
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV--TFNSLINGLCRAGRIEDGL 654
Query: 582 NLLAEMREMGLLP 594
+ +++ G+ P
Sbjct: 655 TMFRKLQAEGIPP 667
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 150/381 (39%), Gaps = 38/381 (9%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+ +++ C + +D A LL++M GC PN V Y TLI + + NRV +A L M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G PD +N +I K R +A + + + PD T ++ +C+ D
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA-AEFYDLMIELGFAPDKYSFAVLLS 429
+ L +R P++V N L+ V G DA A D++ G PD ++ L+
Sbjct: 340 AAKD--LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
G + A++V + + +T+++ K GK A V +
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT--------C------------ 529
+ V + I A + R P+A + +M G KP+ +T C
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 530 ---------------NMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRS 574
N ++ F + ++++ +++ EM+ L + + +L CR+
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 575 DAYYSTSNLLAEMREMGLLPA 595
+L +M G P+
Sbjct: 578 GEVDKARSLFEKMLRDGHAPS 598
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 141/359 (39%), Gaps = 14/359 (3%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTD 301
GI F +++ ++ + + G +L+ M + C P +Y +++ + N
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV 200
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
A+N+F M S P L + V++ AL + R ++K P+ + +
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 362 MICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ + + LL E + PD N ++ L K ++AA+ + M+ GF
Sbjct: 261 SLSKCNRVNEALQLLEE--MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
APD ++ L++ LC G++ A ++ + + I +I + G+ A
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 478 VFKQAVVRKYPL--DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFT 535
V +V Y + D Y I + G A M+ G KPN ++ +++
Sbjct: 375 VLSD-MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 536 FYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
F K + + +L EM ++ + F L + C+ + EM G P
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 208/522 (39%), Gaps = 80/522 (15%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
F LL + + + QMQ+ G N + ++F++ R L LAL +
Sbjct: 77 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG-- 134
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+M+++ Y P+ T +SLLN F + + EA
Sbjct: 135 ------------------------------KMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
L+ MV +G Q +T L+H Q A L++ M+ GC P++VTY +I
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ A NL N M D+V++N +ID K DA +F + + I+PD
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 353 PYTLTSWLSMICQ-------SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
+T +S +C SR+ + E + I+PDLVF NAL+ VK G +A
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLE-----KNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 406 AEFYDLMIELGFA-PDKYSFAVLLSALCAAGKIYEAVKVYRG----GVMSSQET------ 454
+ YD M++ PD ++ L+ C ++ E ++V+R G++ + T
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 455 -------------------------DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
D + +++ L G A VF+ R L
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQML 549
D V Y I AL ++G+ D + + G+KPN T M+ F ++ ++ + +
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 550 KEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
EM + + L R +++ L+ EMR G
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 170/379 (44%), Gaps = 19/379 (5%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ +P+ F LL+A KM+ L M LGI ++ ++I I+ C+
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A +L M+ G P++VT +L+ + NR+++A L + M G+ PD V +
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-- 381
L+ + + +A+ + + + QPD T + ++ +C+ EP L
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR------GEPDLALNLLN 239
Query: 382 ------IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
I+ D+V N ++ L K H DA + ++ M G PD +++ L+S LC G
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL-DNVAY 494
+ +A ++ + + D +I +K GK + A ++ + V K+ D VAY
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI- 553
I + R + + +M + GL N T ++ F++ +D + K+M+
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 554 -GSRIELSDRNFL--NLCN 569
G ++ N L LCN
Sbjct: 420 DGVHPDIMTYNILLDGLCN 438
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 44/276 (15%)
Query: 326 DCHSKAGRH-------QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL------- 371
DC R DA+G+F + K P + LS I + FDL
Sbjct: 41 DCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 100
Query: 372 ---------LPEPALVFRYI---------------------DPDLVFCNALLSYLVKAGH 401
L ++ Y P +V N+LL+
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
S+A D M+E+G+ PD +F L+ L K EAV + V+ + D +
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
+I L K G+ +A + + K D V Y I L + DA +++M+ G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 522 LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+KP+ T N ++ +++L +M+ I
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 10/272 (3%)
Query: 106 ILTKNPNSFLLLLRILWRA----GMHAMFFQAYHQM-QSYGFVPNTFARNLFMDAHFRIG 160
+L KN N L+ L A G + Y +M +S P+ A N + +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 161 NLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTF 216
+ + VF+++ N T+ TL H K+M+ +P+ T+
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTY-TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH 276
+ LL+ + A + M ++ + +T +I C+ G ++ L ++
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
G PNVVTYTT++ + +A LF M+ G P+ +N LI + G
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
+ + + + D T +M+ R+
Sbjct: 550 SAELIKEMRSCGFAGDASTFGLVTNMLHDGRL 581
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 206/460 (44%), Gaps = 11/460 (2%)
Query: 143 VPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXX 198
+P+ F N + A ++ L +++ +++Q N +T++I L +
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI-LINCFCRRSQISLAL 65
Query: 199 XXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKH 258
+M+++ Y P+ T SLLN + + +A L+ MV +G + +T LIH
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 259 CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDL 318
A L+ M+ GC PN+VTY ++ + + A NL N M +A D+
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 319 VLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPE 374
V++N +ID K DAL +F+ + + I+P+ T +S +S +C S LL +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
++ + I+P+LV NAL+ VK G +A + +D MI+ PD +++ L++ C
Sbjct: 246 --MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
++ +A +++ V D + +I K+ + +F++ R D V Y
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
I L G +A + QM +G+ P+ T +++L L+K ++ M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
S I+L + + C++ +L + G+ P
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 191/461 (41%), Gaps = 46/461 (9%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
+MQ G N + N+ ++ R + LAL + ++ + +TL L N
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M+ M Y P+ TF +L++ F + EA L+ MV G Q ++ +
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 252 TILIHKHCQLGILDVA----NK-------------------------------LLQNMLH 276
++++ C+ G +D+A NK L + M
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
G PNVVTY++LI R +DAS L + M P+LV +N LID K G+ +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNA 391
A + + K++I PD +T S ++ C M D L + +F ++ PDL N
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFC---MHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
L+ K+ D E + M G D ++ L+ L G A KV++ V
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 452 QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
D +++++ L GK A VF + LD Y I + ++G+ D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 512 TFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ + G+KPN T N M+ ++ LQ+ +LK+M
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 155/354 (43%), Gaps = 8/354 (2%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ P+ F+ LL+A KM L M LGI ++ + ILI+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+ +A LL M+ G P++VT ++L+ Y R++DA L + M G+ PD + +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 324 LID---CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALV 378
LI H+KA +A+ + + ++ QP+ T ++ +C+ DL +
Sbjct: 121 LIHGLFLHNKA---SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
I+ D+V N ++ L K H DA + M G P+ +++ L+S LC+ G+
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+A ++ + + +I +K GK++ A + + R D Y I
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
R A ++ M P+ T N ++ F K K ++ ++ +EM
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K+M+ P+ T+ LL+ L +A ++ M I+ + ++T +I C+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G +D L ++ G PNVVTY T+I + +A L M+ G PD +
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
N LI H + G + + R + D T+ +M+ R+
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL 550
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 27/380 (7%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M PN +T+ L+++ +A +LLG M+ G+ +V + LI+ +C+
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G+++ A +++ M SPN TY LIK Y +SN V A + N M PD+V +
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR-------MFDLLPE 374
N LID ++G A + ++ + + PD +T TS + +C+S+ +FD L +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
++P++V AL+ KAG +A + M+ P+ +F L+ LCA
Sbjct: 526 KG-----VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 435 GKIYEAV----KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
GK+ EA K+ + G+ + TD T++I L+K G + A + F+Q + D
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTD----TILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN---Q 547
Y I R GR DA +M+ENG+ P+ T + ++ + DL + N
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNFAFD 693
Query: 548 MLKEMIGSRIELSDRNFLNL 567
+LK M + E S FL+L
Sbjct: 694 VLKRMRDTGCEPSQHTFLSL 713
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 207/497 (41%), Gaps = 14/497 (2%)
Query: 103 IGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNL 162
IGC T LL L R G+ Q Y +M PN + N ++ + ++GN+
Sbjct: 183 IGCYNT--------LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 163 HLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHS 218
A +I P+FFT+ + + L+ N +
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK-GCRRNEVAYTH 293
Query: 219 LLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTG 278
L++ + EA L M +V +T+LI C A L++ M TG
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 279 CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
PN+ TYT LI + + A L M G P+++ +N LI+ + K G +DA+
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE-PALVFRYIDPDLVFCNALLSYLV 397
V + + + P+ T + C+S + + ++ R + PD+V N+L+
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
++G+ A LM + G PD++++ ++ +LC + ++ EA ++ +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
++T +I KAGK A + ++ + + +++ + I L G+ +A ++M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAY 577
+ GL+P T +++ K+ D ++M+ S + + CR
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 578 YSTSNLLAEMREMGLLP 594
+++A+MRE G+ P
Sbjct: 654 LDAEDMMAKMRENGVSP 670
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 182/436 (41%), Gaps = 26/436 (5%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFF 178
R+G ++ M G VP+ + +D+ + + A +F ++ PN
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
+ L ++ML + PN+ TF++L++ L EA L
Sbjct: 534 MY-TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
MV +G+Q +V+ TILIH+ + G D A Q ML +G P+ TYTT I+ Y R
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
+ DA ++ MR G +PDL ++ LI + G+ A V + + +P +T S
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 359 WLSMICQSRM------------------FDLLPE--PALVFRYIDPDLVFCNALLSYLVK 398
+ + + + FD + E +V + P+ L+ + +
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 399 AGHPSDAAEFYDLMIE-LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
G+ A + +D M G +P + F LLS C K EA KV +
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
V+I L K G+ +VF+ + Y D +A+ + I + + G ++ M
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Query: 518 KENGLKPNAHTCNMML 533
++NG K ++ T ++++
Sbjct: 893 EKNGCKFSSQTYSLLI 908
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 181/418 (43%), Gaps = 40/418 (9%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
+++LLN+ + + E Q+ M+ + ++ + +++ +C+LG ++ AN+ + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 276 HTGCSPNVVTYTTLIKAYME-----------------------------------SNRVT 300
G P+ TYT+LI Y + + R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 301 DASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
+A +LF M+ P + + VLI + R +AL + + + + I+P+ +T T +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 361 SMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
+C F+ E ++ + + P+++ NAL++ K G DA + +LM +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
P+ ++ L+ C + +++A+ V + D + +I ++G + A +
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
R D Y I +L +S R +AC +D +++ G+ PN ++ + K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 539 EKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAE-MREMGLLPA 595
+ + + ML++M+ + F L + C +D + LL E M ++GL P
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC-ADGKLKEATLLEEKMVKIGLQPT 601
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 197/483 (40%), Gaps = 33/483 (6%)
Query: 101 ESIGCILTKN--PN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAH 156
E +G +L K PN ++ L+ + GM M+S PNT N + +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 157 FRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPN 212
+ N+H A+ V ++ P+ T++ +L M P+
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYN-SLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
T+ S++++ K + EA L + G+ +V ++T LI +C+ G +D A+ +L+
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
ML C PN +T+ LI ++ +A+ L M G P + +LI K G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRY-IDPDLVFCN 390
A F+ + +PD +T T+++ C + R+ D A + + PDL +
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS---------------ALCAAG 435
+L+ G + A + M + G P +++F L+ LCA
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 436 KIYE---AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK--YPLD 490
+ E V++ V S +A+ + +I+ + + G +A VF + P +
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
V A+ C + + +A D M G P +C +++ YK+ + ++ + +
Sbjct: 797 LVFNALLSCC-CKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 551 EMI 553
++
Sbjct: 856 NLL 858
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 181/395 (45%), Gaps = 31/395 (7%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+ M+ + P+ +T+ +LN + A+ L M G+ V +TI++ C+
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G+++ A K M GC+PNVVTYT LI AY+++ +V+ A+ LF M S G P++V +
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
+ LID H KAG+ + A +F + C S+ +P+ + F+
Sbjct: 592 SALIDGHCKAGQVEKACQIFERM-------------------CGSKD---VPDVDMYFKQ 629
Query: 382 ID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
D P++V ALL K+ +A + D M G P++ + L+ LC GK
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 437 IYEAVKVYRGGVMSSQETDARIHTV--IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
+ EA +V MS A ++T +I K + +A+ V + + + V Y
Sbjct: 690 LDEAQEVKTE--MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
I L + G+T +A M+E G +PN T M+ F ++ ++L+ M
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGS 807
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMRE 589
+ + + L + C++ A NLL EM++
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/521 (19%), Positives = 216/521 (41%), Gaps = 31/521 (5%)
Query: 99 QLESIGCILTK-NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHF 157
++ + G +L K N +SF R L AG + F +M GF+P+T + ++
Sbjct: 438 EMLAAGVVLNKINVSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 158 RIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNA 213
+ LA +F++++ + +T+ I + + M + PN
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE-MREVGCTPNV 553
Query: 214 NTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
T+ +L++A+ K + A +L M+ G ++ ++ LI HC+ G ++ A ++ +
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 274 MLHT----------------GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
M + PNVVTY L+ + +S+RV +A L + M G P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--P 375
++++ LID K G+ +A V +S+ YT +S + + + DL +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
++ P++V ++ L K G +A + +M E G P+ ++ ++ G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
KI +++ + + V+I K G +A + ++ +P Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS 555
I + ++ D++ ++ P +++ K + L+ ++L+E+
Sbjct: 854 KVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATF 911
Query: 556 RIELSD--RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
L D + +L C ++ + L +EM + G++P
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 41/419 (9%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM PN T+ +LL L ++L +M++ G S ++ L+H +C G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLI------KAYMESNRVTDASNLFNHMRSAGHTP 316
A KLL+ M+ G P V Y LI K + + + A ++ M +AG
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 317 DLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR-------MF 369
+ + + C AG+++ A V R + Q PD T + L+ +C + +F
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 370 DLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
+ + LV D+ ++ KAG A ++++ M E+G P+ ++ L+
Sbjct: 507 EEMKRGGLV-----ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
A A K+ A +++ + + ++ +I KAG+ A +F++
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER-------- 613
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQML 549
+C S PD ++ Q +N +PN T +L F K +++ ++L
Sbjct: 614 --------MCG---SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 550 KEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSS--DKY 606
M E + + L + C+ + EM E G PA L+ SS D+Y
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG-FPA-TLYTYSSLIDRY 719
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/533 (20%), Positives = 192/533 (36%), Gaps = 82/533 (15%)
Query: 70 DHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLL------------- 116
D+ +V V +VP++ T+ +AI + + + + FL
Sbjct: 81 DYGNVNVHQVVPII---TQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIE 137
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPN 176
+LR++ R FF + Y + N +D R + + QQI+ +
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVY--NALVDLIVRDDDEKVPEEFLQQIRDDD 195
Query: 177 ---FFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAY 233
F F L R+ + P+ +T++ L+ AF K D L A
Sbjct: 196 KEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255
Query: 234 QLLGLMVVLGIQFS-------------VNVW-------------------TILIHKHCQL 261
+ M + ++ V W T LI C+
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA 315
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
+ + A L M T C PNVVTY+TL+ + ++ + N M G P ++
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N L+ + +G H A + + + K P + IC
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG---------------- 419
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAE-FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
D D + C+ L D AE Y M+ G +K + + LC+AGK +A
Sbjct: 420 -DKDSLNCDLL-----------DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
V R + D ++ ++ L A K +A +F++ D Y + + +
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
++G A ++++M+E G PN T ++ + K K + N++ + M+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 216/488 (44%), Gaps = 15/488 (3%)
Query: 119 RILWRAGMHAMFFQA----YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ- 173
R + R G+H+M + M +P+ F N + A ++ L +++ +++Q
Sbjct: 54 REILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQR 113
Query: 174 ---PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALL 230
N +T++I L + +M+++ Y P+ T SLLN + +
Sbjct: 114 LGISHNLYTYNI-LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
+A L+ MV +G + +T LIH A L+ M+ GC PN+VTY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+ + A NL N M +A ++V+++ +ID K DAL +F + + ++
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 351 PDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
P+ T +S +S +C S LL + ++ R I+P++V NAL+ VK G +A
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSD--MIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVEL 466
+ YD MI+ PD ++++ L++ C ++ EA ++ + + + +I
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 467 IKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNA 526
KA + +F++ R + V Y I ++ +A + QM +G+ PN
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 527 HTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAE 586
T N +L K L+K + + + S++E + + + C++ +L
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 587 MREMGLLP 594
+ G+ P
Sbjct: 531 LSLKGVKP 538
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 190/461 (41%), Gaps = 46/461 (9%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
+MQ G N + N+ ++ R + LAL + ++ + +TL L N
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M+ M Y P+ TF +L++ F + EA L+ MV G Q ++ +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 252 TILIHKHCQLGILDVANKLLQNML-----------------------------------H 276
++++ C+ G +D+A LL M +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
G PNV+TY++LI R +DAS L + M P++V +N LID K G+ +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNA 391
A ++ + K++I PD +T +S ++ C M D L E +F + P++V N
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFC---MHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
L++ KA + E + M + G + ++ L+ A A V++ V
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 452 QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
+ + ++ L K GK A VF+ K Y + I + ++G+ D
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 512 TFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ + G+KP+ N M+ F ++ ++ + + ++M
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 19/362 (5%)
Query: 95 AILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLF 152
A++ ++ GC PN ++ +++ L + G + F ++M++ N +
Sbjct: 211 ALVDRMVQRGC----QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 153 MDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH 208
+D+ + + AL +F +++ PN T+ + L N M+
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD-MIERK 325
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
PN TF++L++AF K L+EA +L M+ I + ++ LI+ C LD A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ + M+ C PNVVTY TLI + ++ R+ + LF M G + V + LI
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-----D 383
+A +A VF+ + + P+ T + L +C++ L + +VF Y+ +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK---LEKAMVVFEYLQRSKME 502
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P + N ++ + KAG D + + + G PD + ++S C G EA +
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 444 YR 445
+R
Sbjct: 563 FR 564
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXX 199
PN N +DA + G L A ++ ++ P+ FT+ +L +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS-SLINGFCMHDRLDEAKH 386
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
+ M+ +PN T+++L+N F K + E +L M G+ + +T LIH
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
Q D A + + M+ G PN++TY TL+ ++ ++ A +F +++ + P +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
+N++I+ KAG+ +D +F SLS + ++PD + +S C+ L E +F
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK---GLKEEADALF 563
Query: 380 RYIDPD 385
R + D
Sbjct: 564 RKMRED 569
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 4/275 (1%)
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y +++ + S ++ DA LF M + P + +N L+ +K + + + +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDL---LPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
+ I + YT ++ C+ L L + Y +P +V ++LL+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRI 171
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
SDA D M+E+G+ PD +F L+ L K EAV + V + + + V+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ L K G +A + + K + V Y+ I +L + DA + +M+ G+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+PN T + ++ + +++L +MI +I
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 8/199 (4%)
Query: 126 MHAMFFQAYHQ---MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFF 178
MH +A H M S PN N ++ + + + +F+++ N
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
T+ TL H K+M+ +PN T+++LL+ K L +A +
Sbjct: 437 TY-TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
+ ++ ++ + I+I C+ G ++ L ++ G P+V+ Y T+I +
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 299 VTDASNLFNHMRSAGHTPD 317
+A LF MR G PD
Sbjct: 556 KEEADALFRKMREDGPLPD 574
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 180/396 (45%), Gaps = 6/396 (1%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ Y P+ T SLLN + + +A L+ MV +G + +T LIH
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A L+ M+ GC PN+VTY ++ + A NL N M +A D+V++N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALV 378
+ID K DAL +F+ + + I+P+ T +S +S +C S LL + ++
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD--MI 322
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ I+P+LV NAL+ VK G +A + YD MI+ PD +++ L++ C ++
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+A +++ V D + +I K+ + +F++ R D V Y I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
L G +A + QM +G+ P+ T +++L L+K ++ M S I+
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
L + + C++ +L + G+ P
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 189/449 (42%), Gaps = 13/449 (2%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ +L+ R ++ +M G+ P+ + ++ + + A+ + Q+
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 173 QP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
P+ TF TL H RM++ PN T+ ++N K
Sbjct: 182 VEMGYRPDTITF-TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
A LL M I+ V ++ +I C+ +D A L + M G PNVVTY++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LI R +DAS L + M P+LV +N LID K G+ +A ++ + K++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPS 403
I PD +T S ++ C M D L + +F ++ PD+V N L+ K+
Sbjct: 361 IDPDIFTYNSLVNGFC---MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
D E + M G D ++ L+ L G A KV++ V D +++++
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
L GK A VF + LD Y I + ++G+ D + + G+K
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
PN T N M+ ++ LQ+ +LK+M
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 184/425 (43%), Gaps = 24/425 (5%)
Query: 95 AILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLF 152
A++ ++ GC PN ++ +++ L + G + ++M++ + N
Sbjct: 211 ALVDRMVQRGC----QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 153 MDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH 208
+D+ + ++ AL +F++++ PN T+ +L M+
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS-SLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
PN TF++L++AF K +EA +L M+ I + + L++ C LD A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
++ + M+ C P+VVTY TLIK + +S RV D + LF M G D V + LI
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL-VFRY-----I 382
G +A VF+ + + PD T + L +C + E AL VF Y I
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL----EKALEVFDYMQKSEI 501
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
D+ ++ + KAG D + + + G P+ ++ ++S LC+ + EA
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA-L 501
+ + ++ + +I ++ G +A + ++ ++ D A +G+ A +
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD--ASTIGLVANM 619
Query: 502 LRSGR 506
L GR
Sbjct: 620 LHDGR 624
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 162/393 (41%), Gaps = 41/393 (10%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKM---DALLE----------------------------- 231
M++ P+ F+ LL+A KM D ++
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 232 ---AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
A LLG M+ LG + S+ + L++ +C + A L+ M+ G P+ +T+TT
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LI N+ ++A L + M G P+LV + V+++ K G AL + +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 349 IQPDPYTLTSWLSMICQSRMFD----LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSD 404
I+ D + + +C+ R D L E + + I P++V ++L+S L G SD
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKE--METKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
A++ MIE P+ +F L+ A GK EA K+Y + S + D + ++
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 465 ELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP 524
+ A +F+ V + D V Y I +S R D + +M GL
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 525 NAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+ T ++ + + D ++ K+M+ +
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 8/317 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A L M+ + P++V + L+ A + + +L M+ L +N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLPEPALVFRYI 382
LI+C + + AL + + K +P TL+S L+ C R+ D + ALV + +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV---ALVDQMV 182
Query: 383 D----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ PD + L+ L S+A D M++ G P+ ++ V+++ LC G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
A+ + + E D I II L K A +FK+ + + V Y+ I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
L GR DA M E + PN T N ++ F KE + ++ +MI I+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 559 LSDRNFLNLCNFPCRSD 575
+ +L N C D
Sbjct: 363 PDIFTYNSLVNGFCMHD 379
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 4/275 (1%)
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y +++ + ++ DA LF M + P +V +N L+ +K + + + +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDL---LPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
+ I YT ++ C+ L L + Y +P +V ++LL+
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRI 171
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
SDA D M+E+G+ PD +F L+ L K EAV + V + + + V+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ L K G +A + + K D V + I +L + DA + +M+ G+
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+PN T + ++ +Q+L +MI +I
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K+M+ P+ T+ LL+ L +A ++ M I+ + ++T +I C+
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G +D L ++ G PNVVTY T+I + +A L M+ G P+ +
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
N LI H + G + + R + D T+ +M+ R+
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL 625
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 211/470 (44%), Gaps = 15/470 (3%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
QMQ+ G + + ++F++ R L LAL V ++ + +TL L N
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M+ M Y P+ TF +L++ F + EA L+ MV G Q + +
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+++ C+ G +D+A LL+ M +VV Y T+I + + DA NLF M +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS-------MIC 364
G PD+ ++ LI C GR DA + + ++ I P+ T ++ + ++
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 365 QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+++D ++ R IDPD+ ++L++ +A ++LMI P+ ++
Sbjct: 347 AEKLYD-----EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
+ L+ C A ++ E ++++R + +T +I +A A VFKQ V
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ + Y + + L ++G+ A ++ ++ + ++P+ +T N+M+ K ++
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ + + + + + + CR + +LL +M+E G LP
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 162/354 (45%), Gaps = 8/354 (2%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ +P+ F+ LL+A KM+ L M LGI + ++I I+ C+
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A +L M+ G P++VT ++L+ Y S R++DA L + M G+ PD +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 324 LID---CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALV 378
LI H+KA +A+ + + ++ QPD T + ++ +C+ DL +
Sbjct: 194 LIHGLFLHNKA---SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
I+ D+V N ++ L K H DA + M G PD ++++ L+S LC G+
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+A ++ + + + +I +K GK + A ++ + + R D Y+ I
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
R +A ++ M PN T + ++ F K K +++ ++ +EM
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 139/317 (43%), Gaps = 8/317 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+D A L +M+ + P++V + L+ A + N+ +L M++ G + DL +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLPEPALVFRYI 382
I+C + + AL V + K +PD TL+S L+ C S R+ D + ALV + +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV---ALVDQMV 180
Query: 383 D----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ PD L+ L S+A D M++ G PD ++ +++ LC G I
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
A+ + + E D I+ II L K A +F + + D Y+ I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
L GR DA M E + PN T + ++ F KE L + ++ EMI I+
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 559 LSDRNFLNLCNFPCRSD 575
+ +L N C D
Sbjct: 361 PDIFTYSSLINGFCMHD 377
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 8/250 (3%)
Query: 126 MHAMFFQAYHQ---MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFF 178
MH +A H M S PN + + + + + +F+++ N
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
T+ TL H K+M+ + +PN T++ LL+ K L +A +
Sbjct: 435 TY-TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
+ ++ + + I+I C+ G ++ +L N+ G SPNV+ Y T+I +
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
+A +L M+ G P+ +N LI + G + + + + + D T+
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 359 WLSMICQSRM 368
+M+ R+
Sbjct: 614 VTNMLHDGRL 623
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 186/400 (46%), Gaps = 16/400 (4%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ P+ F LL+A KM L M +LGI ++ IL++ C+
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A L M+ G P++VT+ +L+ + +RV DA +F+ M G+ P++V++N
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPA 376
+ID K+ + +AL + + K I PD T S +S +C S RM + +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-- 249
Query: 377 LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
R I PD+ NAL+ VK G S+A EFY+ MI PD ++++L+ LC +
Sbjct: 250 ---REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 437 IYEAVKVYRGGVMSSQET--DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
+ EA +++ G M S+ D ++++I K+ K +F + R + V Y
Sbjct: 307 LDEAEEMF--GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
+ I R+G+ A + +M G+ PN T N++L ++K +L +M
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ ++ + + C++ ++ + GL+P
Sbjct: 425 NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 188/445 (42%), Gaps = 40/445 (8%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
F LL + + + + + QMQ G N N+ ++ R L LAL+
Sbjct: 83 DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL--- 139
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+M+++ + P+ TF SLLN F + D + +A
Sbjct: 140 -----------------------------GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+ MV +G + +V ++ +I C+ +D A LL M G P+VVTY +LI
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
S R +DA+ + + M PD+ +N LID K GR +A + + ++++ PD
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 353 PYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAE 407
T + + +C M+ L E +F ++ PD+V + L++ K+ +
Sbjct: 291 IVTYSLLIYGLC---MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
+ M + G + ++ +L+ C AGK+ A +++R V + + V++ L
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
GK A + D V Y + I + ++G DA Y + GL P+
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEM 552
T M+ YK+ ++ + + ++M
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKM 492
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 131/293 (44%), Gaps = 6/293 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD + L +M+ P++ ++ L+ A + + L+ M+ G +L N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLPE-PALVFRY 381
L++C + + AL + K +P T S L+ C+ R++D L +V
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
P++V N ++ L K+ +A + + M + G PD ++ L+S LC++G+ +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 442 KVYRGGVMSSQET--DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
++ M+ +E D +I +K G+ A +++ + R D V Y++ I
Sbjct: 242 RMV--SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
L R +A + M G P+ T ++++ + K K ++ ++ EM
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 217/518 (41%), Gaps = 25/518 (4%)
Query: 112 NSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ 171
++F +L++ L RA M SYG VP+ M + G+L AL + +Q
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 172 IQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH----YYPNANTFHSLLNAFFKMD 227
+ ++++ + + + M ++P+ TF++L+N K
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+ A +++ +M+ G V + +I C+LG + A ++L M+ CSPN VTY
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
TLI + N+V +A+ L + S G PD+ +N LI H+ A+ +F + +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHP 402
+PD +T + +C D E + + ++ ++ N L+ KA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLD---EALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
+A E +D M G + + ++ L+ LC + ++ +A ++ +M Q+ D + +
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ + G AA + + D V Y I L ++GR A ++ G+
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR-----NFLNLCN--FPCRSD 575
H N ++ ++++ + + +EM+ D F LCN P R
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR-- 664
Query: 576 AYYSTSNLLAEMREMGLLPA-KALHALSSDKYAESLEE 612
+ L E+ E G +P +L+ L+ S+EE
Sbjct: 665 ---EAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 191/434 (44%), Gaps = 17/434 (3%)
Query: 141 GFVPNTFARNLFMDAHFRIGNLHLALTV----FQQIQPPNFFTFDITLFHLSNXXXXXXX 196
GF P+ + N ++ + G++ A+ + Q+ P+ +T++ + L
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 197 XXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIH 256
+M+ PN T+++L++ K + + EA +L ++ GI V + LI
Sbjct: 350 VEVL-DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 257 KHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTP 316
C VA +L + M GC P+ TY LI + ++ +A N+ M +G
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 317 DLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE-- 374
++ +N LID KA + ++A +F + + + T + + +C+SR + +
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
++ PD N+LL++ + G AA+ M G PD ++ L+S LC A
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR-KYPLDNVA 493
G++ A K+ R M + +I L + K A +F++ + + + P D V+
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 494 YAV---GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM---LFTFYKEKDLQK-VN 546
Y + G+C G +A F ++ E G P + M+ L T E+ L K VN
Sbjct: 649 YRIVFRGLCN--GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
Query: 547 QMLKEMIGSRIELS 560
++++ S E+S
Sbjct: 707 MVMQKARFSEEEVS 720
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 179/396 (45%), Gaps = 17/396 (4%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ + ++ +LN ++L M V GI+ V+ + +LI C+ L A +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L++M G P+ T+TT+++ Y+E + A + M G + V NV++ K
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 331 AGRHQDALGVFRSLSKQN-IQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYI 382
GR +DAL + +S Q+ PD YT + ++ +C++ + D++ +
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY----- 326
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
DPD+ N+++S L K G +A E D MI +P+ ++ L+S LC ++ EA +
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 443 VYRGGVMSSQET--DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
+ R V++S+ D +I L + +A +F++ + D Y + I +
Sbjct: 387 LAR--VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
L G+ +A QM+ +G + T N ++ F K ++ ++ EM + +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAK 596
+ L + C+S + L+ +M G P K
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 39/424 (9%)
Query: 208 HYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA 267
++ P + +L + + + ++L M + + + ILI + Q + D
Sbjct: 78 NFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEI 137
Query: 268 NKLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
++ M+ G P+ Y ++ ++ N + M G PD+ +NVLI
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRYIDP 384
+A + + A+ + + + PD T T+ + + D L +V
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMI-ELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
V N ++ K G DA F M + GF PD+Y+F L++ LC AG + A+++
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
+ + D + +I L K G+ A V Q + R + V Y I L +
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 504 S----------------GRTPDACTF-------------------YDQMKENGLKPNAHT 528
G PD CTF +++M+ G +P+ T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 529 CNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMR 588
NM++ + + L + MLK+M S S + L + C+++ + EM
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 589 EMGL 592
G+
Sbjct: 498 VHGV 501
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 129/350 (36%), Gaps = 73/350 (20%)
Query: 86 LTRRHKTLQAILLQLESIGCILTKNPNSFL--LLLRILWRAGMHAMFFQAYHQMQSYGFV 143
LTR H+ + ++ S GC P+ F +L+ L G QM+ G
Sbjct: 412 LTRNHRVAMELFEEMRSKGC----EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
+ N +D + A +F +++
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEME------------------------------ 497
Query: 204 MLRMHYYP-NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+H N+ T+++L++ K + +A QL+ M++ G + + L+ C+ G
Sbjct: 498 ---VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+ A ++Q M GC P++VTY TLI ++ RV AS L ++ G +N
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
+I + + +A+ +FR + +QN P
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAP------------------------------- 643
Query: 383 DPDLVFCNALLSYLVKAGHP-SDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
PD V + L G P +A +F ++E GF P+ S +L L
Sbjct: 644 -PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 185/435 (42%), Gaps = 43/435 (9%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
++ML + N + LL + +M A+ +L LM+ G F+V IL+ C+
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
A LL+ M P+V +Y T+I+ + E + A L N M+ +G + LV W
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPAL 377
+LID KAG+ +A+G + + ++ D TS + C D L E +
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE--V 273
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ R P + N L+ K G +A+E ++ MIE G P+ Y++ L+ LC GK
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV- 496
EA+++ + +E +A + +II +L K G A + + R+ DN+ Y +
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 497 --GICA----------------------------------LLRSGRTPDACTFYDQMKEN 520
G+CA L + R A YD + E
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 521 GLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYST 580
+ T N++L + K D+ K ++ K++ S+I + + + + C++
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 581 SNLLAEMREMGLLPA 595
LL +MR L P+
Sbjct: 514 KGLLCKMRVSELQPS 528
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 182/399 (45%), Gaps = 8/399 (2%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+ M R P+ ++++++ F + L +A +L M G +S+ W ILI C+
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G +D A L+ M G ++V YT+LI+ + + + LF+ + G +P + +
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC----QSRMFDLLPEPAL 377
N LI K G+ ++A +F + ++ ++P+ YT T + +C LL +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL--NLM 343
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ + +P+ V N +++ L K G +DA E +LM + PD ++ +LL LCA G +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 438 YEAVKVYRGGVMSSQETDARI--HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
EA K+ + S TD + + +I L K + A ++ V + D V
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS 555
+ + + L++G A + Q+ ++ + N+ T M+ F K L +L +M S
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 556 RIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ S ++ L + C+ + L EM+ P
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 173/411 (42%), Gaps = 51/411 (12%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P A T+++L+ F K+ L EA ++ M+ G++ +V +T LI C +G A +L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M+ PN VTY +I + V DA + M+ PD + +N+L+
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 331 AGRHQDALGVFRSLSKQN--IQPDPYTLTSWLSMICQSR-------MFDLLPEPALVFRY 381
G +A + + K + PD + + + +C+ ++DLL E +
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE-----KL 454
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEF---------------YDLMIELGFA-------- 418
D V N LL+ +KAG + A E Y MI+ GF
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID-GFCKTGMLNVA 513
Query: 419 -------------PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
P + + LLS+LC G + +A +++ + D ++I
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
+KAG A ++ D Y+ I L+ G +A +F+D+M ++G +P+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDA 576
AH C+ +L + + K+ +++K+++ I L + ++ C S A
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSA 684
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 168/363 (46%), Gaps = 12/363 (3%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ Y P+ T +SLLN F + + EA L+ MV +G Q +T L+H Q
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A L++ M+ GC P++VTY +I + A NL N M D+V+++
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-------SRMFDLLPEP 375
+ID K DAL +F + + I+PD +T +S +S +C SR+ + E
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE- 303
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
R I+P++V N+L+ K G +A + +D MI+ P+ ++ L++ C
Sbjct: 304 ----RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
++ EA +++ V D + +I KA K + +F+ R + V Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS 555
I ++ +A + QM +G+ PN T N +L K L+K + + + S
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 556 RIE 558
++E
Sbjct: 480 KME 482
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 211/548 (38%), Gaps = 102/548 (18%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
+M+ G N + N+ ++ R L AL + ++ + +TL L N
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M+ M Y P+ TF +L++ F+ + EA L+ MVV G Q + +
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+I+ C+ G D+A LL M +VV Y+T+I + + V DA NLF M +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS-------MIC 364
G PD+ ++ LI C GR DA + + ++ I P+ T S + +I
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 365 QSRMFDLLPEPALVFRYIDPDLV--------FC--------------------------- 389
++FD ++ R IDP++V FC
Sbjct: 329 AEKLFD-----EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 390 NALLSYLVKAGHPSDAAE-FYDL----------------------------------MIE 414
N L++ KA D E F D+ M+
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 415 LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLM 474
G P+ ++ LL LC GK+ +A+ V+ S E D + ++ + KAGK
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 475 AATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLF 534
+F ++ D +AY I + G +A T + +MKE+G P++ T N ++
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 535 TFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ D +++KEM CR ST L+ +M G L
Sbjct: 564 AHLRDGDKAASAELIKEM-----------------RSCRFAGDASTYGLVTDMLHDGRLD 606
Query: 595 AKALHALS 602
L LS
Sbjct: 607 KGFLEVLS 614
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 6/335 (1%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A L M+ + P++V ++ L+ A + + + M G + +L +N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
+I+C + + AL + + K P TL S L+ C ALV + ++
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS--EAVALVDQMVE 163
Query: 384 ----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
PD V L+ L + S+A + M+ G PD ++ +++ LC G+
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A+ + E D I++ +I L K A +F + + D Y+ I
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
L GR DA M E + PN T N ++ F KE L + ++ EMI I+
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 560 SDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + +L N C D + M LP
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 123/299 (41%), Gaps = 2/299 (0%)
Query: 298 RVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLT 357
++ +A +LF M + P +V ++ L+ +K + + + + + YT
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 358 SWLSMICQSRM--FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
++ +C+ F L ++ P +V N+LL+ S+A D M+E+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 416 GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMA 475
G+ PD +F L+ L K EAV + V+ + D + +I L K G+ +A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 476 ATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFT 535
+ + K D V Y+ I +L + DA + +M G++P+ T + ++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 536 FYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+++L +M+ +I + F +L + + L EM + + P
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 191/434 (44%), Gaps = 14/434 (3%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSN 189
+ +M+ G VP+T N +D ++G L + F++++ P+ T++ L +
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN-ALINCFC 343
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
+ M PN ++ +L++AF K + +A + M +G+ +
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+T LI +C++G L A +L ML G NVVTYT LI ++ R+ +A LF M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
+AG P+L +N LI KA AL + L + I+PD +++ +C
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS---L 520
Query: 370 DLLPEPALVFRYIDPDLVFCNA-----LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+ + +V + + N+ L+ K+G+P++ D M EL +F
Sbjct: 521 EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Query: 425 AVLLSALCAAGKIYEAVKVY-RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
VL+ LC + +AV + R + +A I T +I L K + A T+F+Q V
Sbjct: 581 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Query: 484 VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ 543
+ D AY + + G +A D+M E G+K + +++ LQ
Sbjct: 641 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 544 KVNQMLKEMIGSRI 557
K L+EMIG I
Sbjct: 701 KARSFLEEMIGEGI 714
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 196/457 (42%), Gaps = 23/457 (5%)
Query: 135 HQMQSYGFVPNT-FARNLFMDAHFRIGNLHLA---LTVF------QQIQPPNFFTFDITL 184
H ++SY V + F ++ DA+ + + L+ VF + + P F FD L
Sbjct: 140 HSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFD-AL 198
Query: 185 FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGI 244
F + +M R +P + + LL+ F K+ + + M+ G
Sbjct: 199 FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 258
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
+ +V + I+I C+ G ++ A L + M G P+ VTY ++I + + R+ D
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
F M+ PD++ +N LI+C K G+ L +R + ++P+ + ++ + C
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 365 QSRMFDLLPEPALVFRYID-------PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ M + A+ F Y+D P+ +L+ K G+ SDA + M+++G
Sbjct: 379 KEGMM----QQAIKF-YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
+ ++ L+ LC A ++ EA +++ + + + +I +KA A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+ + R D + Y I L + A ++MKE G+K N+ ++ ++
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 538 KEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRS 574
K + + +L EM IE++ F L + C++
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 142/348 (40%), Gaps = 43/348 (12%)
Query: 101 ESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIG 160
E G L N S+ L+ + GM + Y M+ G VPN + +DA+ +IG
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 161 NLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
NL A F L N ML++ N T+ +L+
Sbjct: 417 NLSDA-------------------FRLGN-------------EMLQVGVEWNVVTYTALI 444
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
+ + + EA +L G M G+ ++ + LIH + +D A +LL + G
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P+++ Y T I ++ A + N M+ G + +++ L+D + K+G + L +
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 341 FRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDL-------VFCNALL 393
+ + +I+ T + +C+++ L+ + F I D +F A++
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNK---LVSKAVDYFNRISNDFGLQANAAIF-TAMI 620
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
L K A ++ M++ G PD+ ++ L+ G + EA+
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 119/335 (35%), Gaps = 68/335 (20%)
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
LG+L+ A + M P + L+ + + + D F M AG P +
Sbjct: 204 DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 263
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
+N++IDC K G + A G+F + F
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMK---------------------------------F 290
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
R + PD V N+++ K G D F++ M ++ PD ++ L++ C GK+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
++ YR M K VV +Y+ +
Sbjct: 351 GLEFYRE---------------------------MKGNGLKPNVV--------SYSTLVD 375
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
A + G A FY M+ GL PN +T ++ K +L ++ EM+ +E
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 560 SDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + L + C ++ L +M G++P
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P CN LL K G D F+ MI G P +++ +++ +C G + A +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
+ D + +I K G+ F++ D + Y I +
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
G+ P FY +MK NGLKPN + + ++ F KE +Q+ + +M + ++
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 564 FLNLCNFPCR----SDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAE 619
+ +L + C+ SDA+ + +L E ++ AL D AE ++E E +
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD--AERMKEAEELFGK 462
Query: 620 VNT 622
++T
Sbjct: 463 MDT 465
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%)
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
+AL S L+ G +A + + M P S LL GK + + ++ +
Sbjct: 196 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ + ++I + K G A +F++ R D V Y I + GR D
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
F+++MK+ +P+ T N ++ F K L + +EM G+ ++ + ++ L +
Sbjct: 316 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 570 FPCRSDAYYSTSNLLAEMREMGLLP 594
C+ +MR +GL+P
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVP 400
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 219/503 (43%), Gaps = 21/503 (4%)
Query: 71 HQSVTVDHMVPVL---GRLT-----------RRHKTLQAILLQLESIGCILTKNPNSFLL 116
H S+++ M+ +L GRL+ R + I+ L+S N + F L
Sbjct: 111 HTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDL 170
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP- 175
L+R +A +A+ ++S GF + A N + + RIG + LA V+Q+I
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 176 ---NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
N +T +I + L + + YP+ T+++L++A+ + EA
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQ-VQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
++L+ M G V + +I+ C+ G + A ++ ML +G SP+ TY +L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ V + +F+ MRS PDLV ++ ++ +++G AL F S+ + + PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 353 PYTLTSWLSMICQSRMFDLLP--EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYD 410
T + C+ M + ++ + D+V N +L L K +A + ++
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 411 LMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAG 470
M E PD Y+ +L+ C G + A+++++ D + ++ K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 471 KYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCN 530
A ++ V ++ ++Y++ + AL G +A +D+M +KP CN
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 531 MMLFTFYKEKDLQKVNQMLKEMI 553
M+ + + + L++MI
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMI 612
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 177/452 (39%), Gaps = 60/452 (13%)
Query: 125 GMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTF 180
G+ F+ + M GF P + N ++ + G A VF ++ P+ T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 181 DITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMV 240
+L + M P+ F S+++ F + L +A +
Sbjct: 344 R-SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 241 VLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVT 300
G+ ++TILI +C+ G++ VA L ML GC+ +VVTY T++ + +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 301 DASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS-- 358
+A LFN M PD +LID H K G Q+A+ +F+ + ++ I+ D T +
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 359 ---------------WLSMICQSRMFDLLPEP------------------------ALVF 379
W M+ + ++LP P ++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSK----EILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
+ I P ++ CN+++ ++G+ SD F + MI GF PD S+ L+ + +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 440 AVKVYR------GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
A + + GG++ D + I+ + + A V ++ + R D
Sbjct: 639 AFGLVKKMEEEQGGLVP----DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
Y I + +A +D+M + G P+
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 8/320 (2%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G+ +V I+++ C+ G ++ L + G P++VTY TLI AY + +A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
L N M G +P + +N +I+ K G+++ A VF + + + PD T S L
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 363 ICQSRMFDLLPEPALVF-----RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
C+ D++ E VF R + PDLV ++++S ++G+ A +++ + E G
Sbjct: 350 ACKKG--DVV-ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
PD + +L+ C G I A+ + + D + I+ L K A
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+F + R D+ + I + G +A + +MKE ++ + T N +L F
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 538 KEKDLQKVNQMLKEMIGSRI 557
K D+ ++ +M+ I
Sbjct: 527 KVGDIDTAKEIWADMVSKEI 546
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L++ N L + + C N + LI+ Y+++ ++ +A F +RS G T + N
Sbjct: 148 LEIVNSL--DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNA 205
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRY 381
LI + G + A GV++ +S+ + + YTL ++ +C+ + + + +
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ PD+V N L+S G +A E + M GF+P Y++ +++ LC GK A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+V+ + S D+ + +++E K G + VF R D V ++ +
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
RSG A +++ +KE GL P+ +++ + ++ + + EM+ +
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + + C+ L EM E L P
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 222/544 (40%), Gaps = 45/544 (8%)
Query: 49 NVRSSDLIALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILT 108
+++ D + L F ++ R + + + V+ R T+++ + + Q+E G +
Sbjct: 50 DIKEDDAVDL--FQEMTRSRPRPRLIDFSRLFSVVAR-TKQYDLVLDLCKQMELKG--IA 104
Query: 109 KNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
N + +++ R ++ F A ++ G+ P+T + ++ G + AL +
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 169 FQQIQPPNFFTFDITLFHLSNXX---XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
++ ITL L N RM+ + PN T+ +L K
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
A +LL M I+ ++I+I C+ G LD A L M G +++
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
YTTLI+ + + R D + L M TPD+V ++ LIDC K G+ ++A + + +
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 346 KQNIQPDPYTLTSWLSMICQSR-------MFDLLPEPA---------------------- 376
++ I PD T TS + C+ M DL+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 377 --------LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
+ R + D V N L+ + G A E + M+ PD S+ +LL
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
LC G+ +A++++ S E D I+ +II + A K A +F ++
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
D Y + I L + G +A + +M+E+G PN T N+++ E D K ++
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 549 LKEM 552
++E+
Sbjct: 585 IEEI 588
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 188/449 (41%), Gaps = 42/449 (9%)
Query: 91 KTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARN 150
K A+LL + N ++ +L+++ ++G A+ + +M+ + +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 151 LFMDAHFRIGNLHLALTVFQQIQPPNFFTFDI----TLFHLSNXXXXXXXXXXXXKRMLR 206
+ +D + G+L A +F +++ F DI TL + M++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGF-KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 207 MHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDV 266
P+ F +L++ F K L EA +L HK
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEEL--------------------HKE-------- 342
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
M+ G SP+ VTYT+LI + + N++ A+++ + M S G P++ +N+LI+
Sbjct: 343 -------MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDP 384
+ KA D L +FR +S + + D T + + C+ ++ E +V R + P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
D+V LL L G P A E ++ + + D + +++ +C A K+ +A ++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRS 504
+ + D + + ++I L K G A +F++ + + Y + I A L
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 505 GRTPDACTFYDQMKENGLKPNAHTCNMML 533
G + +++K G +A T M++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 158/392 (40%), Gaps = 33/392 (8%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+ M R P F L + + L M + GI ++ +I+I+ C+
Sbjct: 61 QEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRC 120
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
L +A + ++ G P+ VT++TLI RV++A L + M GH P L+
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N L++ G+ DA+ + + + QP+ T L ++C
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC----------------- 223
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
K+G + A E M E D +++++ LC G + A
Sbjct: 224 ----------------KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
++ + + D I+T +I AG++ A + + + RK D VA++ I
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
++ G+ +A + +M + G+ P+ T ++ F KE L K N ML M+ +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLL 593
R F L N C+++ L +M G++
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 12/342 (3%)
Query: 262 GILDV----ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
GI+D+ A L Q M + P ++ ++ L + + +L M G +
Sbjct: 47 GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPA 376
L +++I+C + + A + K +PD T ++ ++ +C + R+ + L
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALE--- 163
Query: 377 LVFRYID----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
LV R ++ P L+ NAL++ L G SDA D M+E GF P++ ++ +L +C
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
+G+ A+++ R + DA +++II L K G A +F + ++ + D +
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
Y I +GR D M + + P+ + ++ F KE L++ ++ KEM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 553 IGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
I I + +L + C+ + +++L M G P
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 34/267 (12%)
Query: 102 SIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGN 161
S GC N +F +L+ +A + + + +M G V +T N + +G
Sbjct: 380 SKGC--GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 162 LHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLN 221
L +A +FQ+ M+ P+ ++ LL+
Sbjct: 438 LEVAKELFQE--------------------------------MVSRRVRPDIVSYKILLD 465
Query: 222 AFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP 281
+A ++ + ++ + ++ I+IH C +D A L ++ G P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
+V TY +I + +++A LF M GH+P+ +N+LI H G + +
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRM 368
+ + D T+ + M+ R+
Sbjct: 586 EEIKRCGFSVDASTVKMVVDMLSDGRL 612
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 201/465 (43%), Gaps = 8/465 (1%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX---X 191
QMQ+ G + + ++F++ R L LAL V ++ + +TL L N
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+M+ M Y P+ TF +L++ F + EA L+ MV G Q + +
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+++ C+ G +D+A LL M NVV + T+I + + V A +LF M +
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL-SMICQSRMFD 370
G P++V +N LI+C GR DA + ++ ++ I P+ T + + + + ++ +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 371 LLP-EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
++ R IDPD + N L++ +A + + M+ P+ ++ L++
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
C ++ + V+++R + +T II +AG A VFKQ V + P
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQML 549
D + Y++ + L G+ A + ++++ ++ N N M+ K KV +
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG---KVGEAW 523
Query: 550 KEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
I+ + + + C +L +M+E G LP
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 170/395 (43%), Gaps = 45/395 (11%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ +P+ F+ LL+A KM+ L M LGI + ++I I+ C+
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A +L M+ G P++VT ++L+ Y S R++DA L + M G+ PD +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 324 LID---CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL--------- 371
LI H+KA +A+ + + ++ QPD T + ++ +C+ DL
Sbjct: 194 LIHGLFLHNKA---SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 372 ---LPEPALVF-------------------------RYIDPDLVFCNALLSYLVKAGHPS 403
+ ++F + I P++V N+L++ L G S
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
DA+ M+E P+ +F L+ A GK+ EA K++ + S + D + ++I
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNV-AYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ A +FK +V K L N+ Y I + R D + +M + GL
Sbjct: 371 NGFCMHNRLDEAKQMFK-FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
N T ++ F++ D + K+M+ +R+
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 8/300 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+D A L +M+ + P++V + L+ A + N+ +L M++ G + DL +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLPEPALVFRYI 382
I+C + + AL V + K +PD TL+S L+ C S R+ D + ALV + +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV---ALVDQMV 180
Query: 383 D----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ PD L+ L S+A D M++ G PD ++ +++ LC G I
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
A+ + + + + I II L K +A +F + + + V Y I
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
L GR DA M E + PN T N ++ F+KE L + ++ +EMI I+
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 8/190 (4%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHL 187
+ + +M G V NT + F+ G+ A VF+Q+ P + T+ I L L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 188 SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
+ K + + N +++++ K + EA+ L L I+
Sbjct: 479 CSYGKLDTALVIF-KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPD 534
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
V + +I C +L A+ L + M G PN TY TLI+A + ++ L
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 308 HMRSAGHTPD 317
MRS+G D
Sbjct: 595 EMRSSGFVGD 604
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 111/297 (37%), Gaps = 39/297 (13%)
Query: 110 NPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
NPN +F L+ ++ G + + +M P+T NL ++ L A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 168 VFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+F+ + PN T++ TL + + M + N T+ +++ F
Sbjct: 385 MFKFMVSKDCLPNIQTYN-TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA---------------- 267
F+ A + MV + + ++IL+H C G LD A
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 268 ---NKLLQNMLHTG---------CS----PNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
N +++ M G CS P+VVTY T+I + +A +LF M+
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
G P+ +N LI + + + + + + D T++ +M+ R+
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRL 620
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 213/520 (40%), Gaps = 40/520 (7%)
Query: 86 LTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPN 145
L ++ K +A+ ++ + G L + ++ L+ L + + + +M F P+
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 146 TFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXX 201
A + ++ + G + AL + +++ PN F ++ + L
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF- 390
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
RM ++ PN T+ L++ F + L A LG MV G++ SV + LI+ HC+
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G + A + M++ P VVTYT+L+ Y ++ A L++ M G P + +
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
L+ +AG +DA+ +F +++ N++P+ T + C+
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE--------------- 555
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
G S A EF M E G PD YS+ L+ LC G+ EA
Sbjct: 556 ------------------GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA- 596
Query: 442 KVYRGGVMSSQ-ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
KV+ G+ E + +T ++ + GK A +V ++ V R LD V Y V I
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
L+ +M + GLKP+ M+ K D ++ + MI +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHA 600
+ + + N C++ L ++M+ + +P + +
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 176/399 (44%), Gaps = 7/399 (1%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVV-LGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
F L+ + + +L+ + +M+ + + V + L+H + +A +L +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
+ G P+V YT +I++ E ++ A + HM + G ++V +NVLID K +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL---LPEPALVFRYIDPDLVFCNA 391
+A+G+ + L+ ++++PD T + + +C+ + F++ + + L R+ P ++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRF-SPSEAAVSS 337
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY-RGGVMS 450
L+ L K G +A +++ G +P+ + + L+ +LC K +EA ++ R G +
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ D ++++I + GK A + + V L Y I + G A
Sbjct: 398 LRPNDV-TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNF 570
F +M L+P T ++ + + + K ++ EM G I S F L +
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 571 PCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAES 609
R+ L EM E + P + + + + Y E
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 154/387 (39%), Gaps = 43/387 (11%)
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
++ P T +LL+ K A +L MV +GI+ V ++T +I C+L L
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW---- 321
A +++ +M TGC N+V Y LI + +V +A + + PD+V +
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 322 -------------------------------NVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+ L++ K G+ ++AL + + + +
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 351 PDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDA 405
P+ + + + +C+ R F E L+F + P+ V + L+ + G A
Sbjct: 365 PNLFVYNALIDSLCKGRKFH---EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
F M++ G Y + L++ C G I A + E +T ++
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
GK A ++ + + + + L R+G DA +++M E +KPN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEM 552
T N+M+ + +E D+ K + LKEM
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/515 (19%), Positives = 207/515 (40%), Gaps = 13/515 (2%)
Query: 88 RRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTF 147
R+ + + ++ IG L N ++ +L+ + R G +M G + +
Sbjct: 381 RKFHEAELLFDRMGKIG--LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 148 ARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXK---RM 204
N ++ H + G++ A ++ +T L + M
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
P+ TF +LL+ F+ + +A +L M ++ + + ++I +C+ G +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL 324
A + L+ M G P+ +Y LI + + ++A + + + + + L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQPD--PYTLTSWLSMICQSR--MFDLLPEPALVFR 380
+ + G+ ++AL V + + ++ + D Y + S+ + R F LL E + R
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE--MHDR 676
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
+ PD V +++ K G +A +DLMI G P++ ++ +++ LC AG + EA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA-YAVGIC 499
+V + ++ ++++ G+ M V + K L N A Y + I
Sbjct: 737 -EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
R GR +A +M +G+ P+ T M+ + D++K ++ M I
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 560 SDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ L + C + + L EM GL+P
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 161/408 (39%), Gaps = 15/408 (3%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFH 186
+ YH+M G P+ + + FR G + A+ +F ++ PN T+++ +
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
K M P+ ++ L++ EA + + +
Sbjct: 552 YCEEGDMSKAFEFL-KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ +T L+H C+ G L+ A + Q M+ G ++V Y LI ++ L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
M G PD V++ +ID SK G ++A G++ + + P+ T T+ ++ +C++
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 367 RMFDLLPEPALVFRYIDP-----DLVFCNALLSYLVKAG-HPSDAAEFYDLMIELGFAPD 420
+ E ++ + P + V L L K A E ++ +++ G +
Sbjct: 731 ---GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLAN 786
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
++ +L+ C G+I EA ++ + D +T +I EL + A ++
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
+ D VAY I +G A ++M GL PN T
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 5/231 (2%)
Query: 129 MFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQ----QIQPPNFFTFDITL 184
+FF +M G P+ +DA + G+ A ++ + PN T+ +
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 185 FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGI 244
L K M + PN T+ L+ K + ++ L ++ G+
Sbjct: 725 NGLCKAGFVNEAEVLCSK-MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
+ + +LI C+ G ++ A++L+ M+ G SP+ +TYTT+I N V A
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
L+N M G PD V +N LI AG A + + +Q + P+ T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 168/357 (47%), Gaps = 12/357 (3%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ Y P+ TF SLL+ F ++ + +A+ L+ LMV G + +V V+ LI C+ G
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
L++A +LL M G +VVTY TL+ S R +DA+ + M PD+V +
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-------SRMFDLLPEP 375
LID K G +A +++ + + ++ P+ T S ++ +C + FDL+
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
P++V N L+S K + + + M GF D +++ L+ C G
Sbjct: 311 GCF-----PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
K+ A+ ++ V D H +++ L G+ A F + + VAY
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ I L ++ + A + ++ G+KP+A T +M+ K ++ +++++ M
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 176/383 (45%), Gaps = 6/383 (1%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
+F L++ F + L A +LG M+ LG + S+ + L+H C + + A L+ M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
+ +G PNVV Y TLI ++ + A L N M G D+V +N L+ +GR
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNAL 392
DA + R + K++I PD T T+ + + + D E ++ +DP+ V N++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
++ L G DA + +DLM G P+ ++ L+S C + E +K+++ MS +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR--MSCE 345
Query: 453 ETDARIHT--VIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+A I T +I + GK +A +F V R+ D + + + + L +G A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNF 570
+D M+E+ N+M+ K ++K ++ + ++ R + +
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 571 PCRSDAYYSTSNLLAEMREMGLL 593
C++ L+ M+E G++
Sbjct: 466 LCKNGPRREADELIRRMKEEGII 488
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 2/288 (0%)
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
A L M+H+ P++V +T L+ A R M G + DL + +LI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRY-IDP 384
C + R AL V + K +P T S L C +R+ D L+ + +P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
++V N L+ L K G + A E + M + G D ++ LL+ LC +G+ +A ++
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRS 504
R + S D T +I +K G A ++K+ + +NV Y I L
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 505 GRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
GR DA +D M G PN T N ++ F K + + + ++ + M
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 102/264 (38%), Gaps = 2/264 (0%)
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP--EPALVFRYIDPDLVFCN 390
R +DA +F + P T L+ R ++ + + I DL
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
L+ + S A M++LG+ P +F LL C +I +A + V S
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
E + ++ +I L K G+ +A + + + D V Y + L SGR DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNF 570
M + + P+ T ++ F K+ +L + ++ KEMI S ++ ++ + ++ N
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 571 PCRSDAYYSTSNLLAEMREMGLLP 594
C Y M G P
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFP 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 33/244 (13%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M++ PN T++S++N L +A + LM G +V + LI C+
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
++D KL Q M G + ++ TY TLI Y + ++ A ++F M S TPD++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
+L+ G + AL F + + +Y
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESE-------------------------------KY 418
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
I +V N ++ L KA A E + + G PD ++ +++ LC G EA
Sbjct: 419 I--GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 442 KVYR 445
++ R
Sbjct: 477 ELIR 480
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 200/472 (42%), Gaps = 9/472 (1%)
Query: 87 TRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNT 146
T+++ + A+ Q+E G + N + +++ R + F A ++ G+ PNT
Sbjct: 101 TKQYDLVLALCKQMELKG--IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNT 158
Query: 147 FARNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXK 202
+ ++ G + AL + ++ P+ T + TL +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN-TLVNGLCLSGKEAEAMLLID 217
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+ PNA T+ +LN K A +LL M I+ ++I+I C+ G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
LD A L M G + N++TY LI + + R D + L M P++V ++
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFR 380
VLID K G+ ++A + + + + I PD T TS + C+ D + +V +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
DP++ N L++ KA D E + M G D ++ L+ C GK+ A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
++++ V + + +++ L G+ A +F++ K LD Y + I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ + + DA + + G+KP T N+M+ K+ L + + ++M
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 169/385 (43%), Gaps = 19/385 (4%)
Query: 91 KTLQAILL--QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFA 148
K +A+LL ++ GC N ++ +L ++ ++G A+ + +M+ +
Sbjct: 208 KEAEAMLLIDKMVEYGC--QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 149 RNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRM 204
++ +D + G+L A +F +++ N T++I + N + M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL-RDM 324
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
++ PN TF L+++F K L EA +L M+ GI +T LI C+ L
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL 324
D AN+++ M+ GC PN+ T+ LI Y ++NR+ D LF M G D V +N L
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL-VFRYID 383
I + G+ A +F+ + + + P+ T L +C + E AL +F I+
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE----SEKALEIFEKIE 500
Query: 384 P-----DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
D+ N ++ + A DA + + + G P ++ +++ LC G +
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 439 EAVKVYRGGVMSSQETDARIHTVII 463
EA ++R D + ++I
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILI 585
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 162/364 (44%), Gaps = 10/364 (2%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+++++ Y PN TF +L+N + EA +L+ MV +G + + L++ C G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A L+ M+ GC PN VTY ++ +S + A L M D V ++
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALV 378
++ID K G +A +F + + I + T + C + +D LL + ++
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD--MI 325
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
R I+P++V + L+ VK G +A E + MI G APD ++ L+ C +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 439 EAVKVYRGGVMSSQETDARIHT--VIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
+A ++ +M S+ D I T ++I KA + +F++ +R D V Y
Sbjct: 386 KANQMV--DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
I G+ A + +M + PN T ++L + +K ++ +++ S+
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 557 IELS 560
+EL
Sbjct: 504 MELD 507
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 163/392 (41%), Gaps = 33/392 (8%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+ M+ P F L +A K L M + GI ++ +I+I+ C+
Sbjct: 77 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 136
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
L +A + ++ G PN +T++TLI RV++A L + M GH PDL+
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N L++ +G+ +A+ + + + QP+ T L+++C
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC----------------- 239
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
K+G + A E M E D +++++ LC G + A
Sbjct: 240 ----------------KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
++ M T+ + ++I AG++ A + + + RK + V ++V I +
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
++ G+ +A + +M G+ P+ T ++ F KE L K NQM+ M+ + +
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLL 593
R F L N C+++ L +M G++
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 155/335 (46%), Gaps = 8/335 (2%)
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL 324
D A L ++M+H+ P V+ ++ L A ++ + L M G +L +++
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRYID 383
I+C + + A + K +P+ T ++ ++ +C + R+ + L LV R ++
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE---LVDRMVE 186
Query: 384 ----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
PDL+ N L++ L +G ++A D M+E G P+ ++ +L+ +C +G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A+++ R + + DA +++II L K G A +F + ++ + + Y + I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
+GR D M + + PN T ++++ +F KE L++ ++ KEMI I
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 560 SDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ +L + C+ + + ++ M G P
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 46/273 (16%)
Query: 102 SIGCILTKNPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRI 159
S GC +PN +F +L+ +A + + +M G V +T N + +
Sbjct: 396 SKGC----DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 160 GNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANT 215
G L++A +FQ++ PPN T+ I L L + N +
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD----------------------NGES 489
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
L F K++ ++ + ++ I+IH C +D A L ++
Sbjct: 490 -EKALEIFEKIEKS-------------KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
G P V TY +I + +++A LF M GH PD +N+LI H G
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
++ + L + D T+ + M+ R+
Sbjct: 596 KSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 219/523 (41%), Gaps = 30/523 (5%)
Query: 89 RHKTLQAILLQLESIGC---ILTKNPNSFLLLLRILWRAGMH-AMFFQAYHQMQSYGFVP 144
R++ + ++E GC ++T N ++L + + G +M+S G P
Sbjct: 223 RYREAVNVFKKMEEDGCKPTLITYN-----VILNVFGKMGTPWNKITSLVEKMKSDGIAP 277
Query: 145 NTFARNLFMDAHFRIGNLHL-ALTVFQQIQPPNFFTFDIT---LFHLSNXXXXXXXXXXX 200
+ + N + R G+LH A VF++++ F +T L +
Sbjct: 278 DAYTYNTLITCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
M+ + P+ T++SL++A+ + L EA +L M G + V +T L+ +
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
G ++ A + + M + GC PN+ T+ IK Y + T+ +F+ + G +PD+V
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
WN L+ + G + GVF+ + + P+ T + +S + F+ + V+R
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE---QAMTVYR 513
Query: 381 Y-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+ PDL N +L+ L + G + + M + P++ ++ LL A
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573
Query: 436 KI----YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN 491
+I A +VY G + E A + +++ K A F + R + D
Sbjct: 574 EIGLMHSLAEEVYSGVI----EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 492 VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKE 551
+ R A D MKE G P+ T N +++ + D K ++L+E
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 552 MIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ I+ ++ + CR+ S + +EMR G++P
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 94 QAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFM 153
QA+ + + +T + +++ +L L R GM + +M+ PN +
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 154 DAHF---RIGNLH-LALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHY 209
A+ IG +H LA V+ + P TL + + + +
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK-TLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
P+ T +S+++ + + + +A +L M G S+ + L++ H + + +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+L+ +L G P++++Y T+I AY + R+ DAS +F+ MR++G PD++ +N I ++
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
++A+GV R + K +P+ T S + C+
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 163/461 (35%), Gaps = 84/461 (18%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNX 190
++M GF P+ N + A+ R G L A+ + Q+ P+ FT+ TL
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY-TTLLSGFER 396
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
+ M PN TF++ + + E ++ + V G+ +
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
W L+ Q G+ + + + M G P T+ TLI AY A ++ M
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL---------- 360
AG TPDL +N ++ ++ G + + V + +P+ T S L
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 361 ----------SMICQSRMF------------DLLPEPALVF-----RYIDPDLVFCNALL 393
S + + R DLLPE F R PD+ N+++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE 453
S + + A D M E GF P ++ L+ M S+
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM-------------------YMHSRS 677
Query: 454 TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
D I+ E++ G D ++Y I A R+ R DA
Sbjct: 678 ADFGKSEEILREILAKG----------------IKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 514 YDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
+ +M+ +G+ P+ T N + ++ + M +E IG
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSY-------AADSMFEEAIG 755
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 143/374 (38%), Gaps = 42/374 (11%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ LL RAG + +M++ G PN N F+ + G + +F +I
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 173 Q----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
P+ T++ TL + K M R + P TF++L++A+ + +
Sbjct: 446 NVCGLSPDIVTWN-TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+A + M+ G+ ++ + ++ + G+ + + K+L M C PN +TY +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 289 LIKAYMESNRV-----------------------------------TDASNLFNHMRSAG 313
L+ AY + +A F+ ++ G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP 373
+PD+ N ++ + + A GV + ++ P T S + M +S F
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 374 E--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
E ++ + I PD++ N ++ + DA+ + M G PD ++ + +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 432 CAAGKIYEAVKVYR 445
A EA+ V R
Sbjct: 745 AADSMFEEAIGVVR 758
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 67/134 (50%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M + P+ T++SL+ + ++ ++L ++ GI+ + + +I+ +C+
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+ A+++ M ++G P+V+TY T I +Y + +A + +M G P+ +N
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 324 LIDCHSKAGRHQDA 337
++D + K R +A
Sbjct: 775 IVDGYCKLNRKDEA 788
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 185/425 (43%), Gaps = 42/425 (9%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ F LLN KM L + ++G+ + +L++ CQ +A+
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M+ G P++VT+T+LI + NR+ +A ++ N M G PD+V++ +ID K
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS---RMFDLLPEPALVFRYIDPDLV 387
G AL +F + I+PD TS ++ +C S R D L + R I PD++
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR-GMTKRKIKPDVI 248
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY--- 444
NAL+ VK G DA E Y+ MI + AP+ +++ L++ C G + EA +++
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 445 --RG-------------GVMSSQETDARI-----------------HTVIIVELIKAGKY 472
+G G ++ D + +T +I + GK
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKE---NGLKPNAHTC 529
+A VF V R P + Y V + L +G+ A ++ M++ +G+ PN T
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 530 NMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMRE 589
N++L L+K + ++M +++ + + C++ + NL +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 590 MGLLP 594
G+ P
Sbjct: 489 KGVKP 493
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 50/395 (12%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ + P+ TF SL+N F + + EA ++ MV +GI+ V ++T +I C+ G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
++ A L M + G P+VV YT+L+ S R DA +L M PD++ +N
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
LID K G+ DA ++ + + +I P+ +T TS ++ C D E +F +
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD---EARQMFYLM 308
Query: 383 D-----PDLV--------FCNA---------------------------LLSYLVKAGHP 402
+ PD+V FC L+ + G P
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR----- 457
+ A E + M+ G P+ ++ VLL LC GK+ +A+ ++ M +E D
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED--MQKREMDGVAPNIW 426
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
+ V++ L GK A VF+ R+ + + Y + I + ++G+ +A + +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
G+KPN T M+ ++E + + + ++M
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 170/397 (42%), Gaps = 45/397 (11%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNX 190
+QM G P+ +D+ + G+++ AL++F Q++ P+ + + L N
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
+ M + P+ TF++L++AF K L+A +L M+ + I ++
Sbjct: 226 GRWRDADSLL-RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+T LI+ C G +D A ++ M GC P+VV YT+LI + + +V DA +F M
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G T + + + LI + G+ A VF + + + P+ T
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY-------------- 390
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL---GFAPDKYSFAVL 427
N LL L G A ++ M + G AP+ +++ VL
Sbjct: 391 -------------------NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE--LIKAGKYLMAATVFKQAVVR 485
L LC GK+ +A+ V+ M +E D I T I+ + KAGK A +F +
Sbjct: 432 LHGLCYNGKLEKALMVFED--MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ V Y I L R G +A + +MKE+G+
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 2/262 (0%)
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPA--LVFRYIDPDLVFCNAL 392
+AL +F + + P T L++I + + FD++ L + DL CN L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
++ ++ P A+ F M++LGF PD +F L++ C ++ EA+ + V
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
+ D ++T II L K G A ++F Q D V Y + L SGR DA +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 513 FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPC 572
M + +KP+ T N ++ F KE ++ EMI I + + +L N C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 573 RSDAYYSTSNLLAEMREMGLLP 594
+ M G P
Sbjct: 294 MEGCVDEARQMFYLMETKGCFP 315
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
L +M+ + P+++ +T L+ + + NL +H++ G + DL N+L++C
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPE-PALVFRYIDPDLV 387
++ + A + K +PD T TS ++ C +RM + + +V I PD+V
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
++ L K GH + A +D M G PD + L++ LC +G+ +A + RG
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+ D +I +K GK+L A ++ + + + Y I G
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+A + M+ G P+ ++ F K K + ++ EM
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 111/262 (42%), Gaps = 9/262 (3%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXX 191
+ Y++M PN F ++ G + A +F ++ F + L N
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 192 XXXXXXXXXXK---RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSV 248
K M + N T+ +L+ F ++ A ++ MV G+ ++
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLH---TGCSPNVVTYTTLIKAYMESNRVTDASNL 305
+ +L+H C G + A + ++M G +PN+ TY L+ + ++ A +
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
F MR ++ + ++I KAG+ ++A+ +F SL + ++P+ T T+ +S + +
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Query: 366 SRMFDLLPEPALVFRYIDPDLV 387
L E ++FR + D V
Sbjct: 508 E---GLKHEAHVLFRKMKEDGV 526
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 197/447 (44%), Gaps = 17/447 (3%)
Query: 119 RILWRAGMHAMFFQ----AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ- 173
R + R G+H + F + +M +P+ + ++ + +++F+Q+Q
Sbjct: 52 RKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI 111
Query: 174 ---PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALL 230
PP T +I + H +M+++ + P+ TF SLLN + + +
Sbjct: 112 LGIPPLLCTCNIVM-HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
+A L ++ +G + +V +T LI C+ L+ A +L M G PNVVTY L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
E R DA+ L M P+++ + LID K G+ +A ++ + + ++
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 351 PDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDA 405
PD +T S ++ +C M+ LL E +F ++ P+ V L+ K+ D
Sbjct: 291 PDVFTYGSLINGLC---MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
+ + M + G + ++ VL+ C G+ A +V+ D R + V++
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
L GK A +F+ R+ ++ V Y + I + + G+ DA + + G+KPN
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEM 552
T M+ F + + + + + K+M
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 175/396 (44%), Gaps = 6/396 (1%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM+ P+ F LL+ KM+ L M +LGI + I++H C
Sbjct: 73 RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A+ L M+ G P++VT+T+L+ Y NR+ DA LF+ + G P++V +
Sbjct: 133 QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRMFD---LLPEPALV 378
LI C K A+ +F + +P+ T + ++ +C+ R D LL + ++
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD--MM 250
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
R I+P+++ AL+ VK G +A E Y++MI++ PD +++ L++ LC G +
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
EA +++ + + I+T +I K+ + +F + + + + Y V I
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
GR A ++QM P+ T N++L ++K + + M ++
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ + + C+ +L + G+ P
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 2/277 (0%)
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNAL 392
DAL +F + P T LS+I + +D++ + I P L CN +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
+ + + P A+ F M++LGF PD +F LL+ C +I +A+ ++ +
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
+ + +T +I L K A +F Q + V Y + L GR DA
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 513 FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPC 572
M + ++PN T ++ F K L + ++ MI + + +L N C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 573 RSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAES 609
+ M G P + ++ + +S
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 32/186 (17%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXX 191
+ +++M G V NT + + + +G +A VF Q
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ-------------------- 388
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
M P+ T++ LL+ + +A + M + ++ +
Sbjct: 389 ------------MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
TI+I C+LG ++ A L ++ G PNV+TYTT+I + + +A +LF M+
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 312 AGHTPD 317
G P+
Sbjct: 497 DGFLPN 502
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 219/494 (44%), Gaps = 18/494 (3%)
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
++L++L + M Y M +G +P N +D+ F+ G+L ++ +++
Sbjct: 208 IVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR 267
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXK---RMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
N ++T L N + M R + +F+ L+ + K +A
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+ + M+ GI + + + I I C G +D A +LL +M +P+VV+Y TL+
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHG 383
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
Y++ + +AS LF+ +R+ P +V +N LID ++G + A + ++ Q I PD
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 353 PYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYD 410
T T+ + ++ + E ++ + I PD ++ G A ++
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 411 LMIELG-FAPDKYSFAVLLSALCAAGKIYEAV----KVYRGGVMSSQETDARIHTVIIVE 465
M+ APD + V + LC G + +A+ K++R G++ T +T +I
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT----YTTVIRG 559
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
++ G++ MA ++ + + ++ + Y V I ++GR A + +MK+ G++PN
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLA 585
T N +L+ K ++ + + L +M I + ++ L + C + + L
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 586 EMREMGLLPAKALH 599
EM + + P H
Sbjct: 680 EMLDKEIEPDGYTH 693
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 73/331 (22%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ ++++L++ + KM +EA L + I S+ + LI C+ G L+ A +L
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG----------------- 313
+ M P+V+TYTTL+K ++++ ++ A+ +++ M G
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 314 -------------------HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPY 354
H PDL ++NV ID K G A+ R + + + PD
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 355 TLTSWLSMICQSRMFDLLPE-----------PALV------------------FRY---- 381
T T+ + ++ F + P+++ F+Y
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 382 ----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ P+++ NALL + KAG+ +A + M E G P+KYS+ +L+S C K
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIK 468
E VK+Y+ + E D H + L K
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 123/303 (40%), Gaps = 34/303 (11%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ L++ + G +M + Y +M G P+ +A R+G+ A + +++
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+ H+ P+ ++ ++ K+ L++A
Sbjct: 506 VATD-------------------------------HHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+ + +G+ +T +I + + G +A L ML P+V+TY LI
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ ++ R+ A M+ G P+++ N L+ KAG +A + ++ I P+
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 353 PYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYD 410
Y+ T +S C ++ + + ++ + I+PD AL +L K H S EF +
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK-DHESREVEFLE 713
Query: 411 LMI 413
++
Sbjct: 714 RLL 716
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 204/483 (42%), Gaps = 11/483 (2%)
Query: 76 VDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYH 135
V H V LGR+ H L +L++L+ T + S+ ++ R G ++
Sbjct: 252 VIHFVCQLGRIKEAHHLL--LLMELKG----YTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXX 195
M+ G PN++ + RI L A F ++ + L +
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 196 XXXXXXKRMLRMH---YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
K MH P+ T+ ++++ F ++ ++EA +L M G++ +T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
LI+ +C+ G + A ++ +M+ GCSPNVVTYTTLI + + A+ L + M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
G P++ +N +++ K+G ++A+ + + D T T+ + C+S D
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 373 PE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
E ++ + + P +V N L++ G D + + M+ G AP+ +F L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
C + A +Y+ D + + ++ KA A +F++ + + +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
Y+V I L+ + +A +DQM+ GL + + T YK K + +
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
Query: 551 EMI 553
E+I
Sbjct: 726 EII 728
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 170/386 (44%), Gaps = 2/386 (0%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
Y P+ ++ +++N + + L + ++L+ +M G++ + ++ +I C++ L A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ M+ G P+ V YTTLI + + + AS F M S TPD++ + +I
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLP-EPALVFRYIDPDL 386
+ G +A +F + + ++PD T T ++ C++ M D ++ P++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
V L+ L K G A E M ++G P+ +++ +++ LC +G I EAVK+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
+ D +T ++ K+G+ A + K+ + + V + V + G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN 566
D + M G+ PNA T N ++ + +L+ + K+M + + + N
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGL 592
L C++ L EM+ G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 6/387 (1%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N +++ +++ ++ + EA+ LL LM + G V ++ +++ +C+ G LD KL+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+ M G PN Y ++I ++ +A F+ M G PD V++ LID K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF----RYIDPDLV 387
G + A F + ++I PD T T+ +S CQ + D++ L + ++PD V
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ--IGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
L++ KAGH DA ++ MI+ G +P+ ++ L+ LC G + A ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+ + + I+ L K+G A + + D V Y + A +SG
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A +M GL+P T N+++ F L+ ++L M+ I + F +L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLP 594
C + + + + +M G+ P
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGP 629
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 6/357 (1%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
+G+ ++V + I+IH CQLG + A+ LL M G +P+V++Y+T++ Y +
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
L M+ G P+ ++ +I + + +A F + +Q I PD T+ +
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 362 MICQSRMFDLLPEPALVF----RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
C+ D+ + R I PD++ A++S + G +A + + M G
Sbjct: 360 GFCKRG--DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
PD +F L++ C AG + +A +V+ + + + +T +I L K G A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+ + + Y + L +SG +A + + GL + T ++ +
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 538 KEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
K ++ K ++LKEM+G ++ + F L N C LL M G+ P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 161/414 (38%), Gaps = 42/414 (10%)
Query: 205 LRMHYYPNANTFHSLLNAFFKM----DALLEAYQLLGLMVVLGIQFSV---NVWTILIHK 257
L ++ Y + + + + FF++ L EA ++ M+ G+ SV NV+ + K
Sbjct: 163 LLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 258 HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
C + + + G NV +Y +I + R+ +A +L M G+TPD
Sbjct: 223 DCYKTATAII--VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL 377
++ ++ +++ + + G + + ++ ++P+ Y S + ++C+
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR------------ 328
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
C ++A E + MI G PD + L+ C G I
Sbjct: 329 ----------ICKL-----------AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
A K + D +T II + G + A +F + + D+V +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I ++G DA ++ M + G PN T ++ KE DL N++L EM +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 558 ELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
+ + + ++ N C+S L+ E GL + D Y +S E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 204/483 (42%), Gaps = 11/483 (2%)
Query: 76 VDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYH 135
V H V LGR+ H L +L++L+ T + S+ ++ R G ++
Sbjct: 252 VIHFVCQLGRIKEAHHLL--LLMELKG----YTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXX 195
M+ G PN++ + RI L A F ++ + L +
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 196 XXXXXXKRMLRMH---YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
K MH P+ T+ ++++ F ++ ++EA +L M G++ +T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
LI+ +C+ G + A ++ +M+ GCSPNVVTYTTLI + + A+ L + M
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
G P++ +N +++ K+G ++A+ + + D T T+ + C+S D
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 373 PE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
E ++ + + P +V N L++ G D + + M+ G AP+ +F L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
C + A +Y+ D + + ++ KA A +F++ + + +
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
Y+V I L+ + +A +DQM+ GL + + T YK K + +
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
Query: 551 EMI 553
E+I
Sbjct: 726 EII 728
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 170/386 (44%), Gaps = 2/386 (0%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
Y P+ ++ +++N + + L + ++L+ +M G++ + ++ +I C++ L A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ M+ G P+ V YTTLI + + + AS F M S TPD++ + +I
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLP-EPALVFRYIDPDL 386
+ G +A +F + + ++PD T T ++ C++ M D ++ P++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
V L+ L K G A E M ++G P+ +++ +++ LC +G I EAVK+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
+ D +T ++ K+G+ A + K+ + + V + V + G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN 566
D + M G+ PNA T N ++ + +L+ + K+M + + + N
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGL 592
L C++ L EM+ G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 6/387 (1%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N +++ +++ ++ + EA+ LL LM + G V ++ +++ +C+ G LD KL+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+ M G PN Y ++I ++ +A F+ M G PD V++ LID K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF----RYIDPDLV 387
G + A F + ++I PD T T+ +S CQ + D++ L + ++PD V
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ--IGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
L++ KAGH DA ++ MI+ G +P+ ++ L+ LC G + A ++
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+ + + I+ L K+G A + + D V Y + A +SG
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A +M GL+P T N+++ F L+ ++L M+ I + F +L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLP 594
C + + + + +M G+ P
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGP 629
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 6/357 (1%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
+G+ ++V + I+IH CQLG + A+ LL M G +P+V++Y+T++ Y +
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
L M+ G P+ ++ +I + + +A F + +Q I PD T+ +
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 362 MICQSRMFDLLPEPALVF----RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
C+ D+ + R I PD++ A++S + G +A + + M G
Sbjct: 360 GFCKRG--DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
PD +F L++ C AG + +A +V+ + + + +T +I L K G A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+ + + Y + L +SG +A + + GL + T ++ +
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 538 KEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
K ++ K ++LKEM+G ++ + F L N C LL M G+ P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 161/414 (38%), Gaps = 42/414 (10%)
Query: 205 LRMHYYPNANTFHSLLNAFFKM----DALLEAYQLLGLMVVLGIQFSV---NVWTILIHK 257
L ++ Y + + + + FF++ L EA ++ M+ G+ SV NV+ + K
Sbjct: 163 LLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 258 HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
C + + + G NV +Y +I + R+ +A +L M G+TPD
Sbjct: 223 DCYKTATAII--VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL 377
++ ++ +++ + + G + + ++ ++P+ Y S + ++C+
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR------------ 328
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
C ++A E + MI G PD + L+ C G I
Sbjct: 329 ----------ICKL-----------AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
A K + D +T II + G + A +F + + D+V +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I ++G DA ++ M + G PN T ++ KE DL N++L EM +
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 558 ELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
+ + + ++ N C+S L+ E GL + D Y +S E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 128/566 (22%), Positives = 228/566 (40%), Gaps = 73/566 (12%)
Query: 87 TRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNT 146
T++++ + A+ Q+ES G + + + +++ R + F ++ G+ P+T
Sbjct: 101 TKQYELVLALCKQMESKG--IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT 158
Query: 147 FARNLFMDA---HFRIGN-LHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXK 202
N ++ R+ L L + + P T + TL +
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN-TLVNGLCLNGKVSDAVVLID 217
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM+ + PN T+ +LN K A +LL M I+ ++I+I C+ G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
LD A L M G +++TY TLI + + R D + L M +P++V ++
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEP 375
VLID K G+ ++A + + + ++ I P+ T S + C+ +M DL
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL---- 393
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEF---------------YDLMIELGFA-- 418
++ + DPD++ N L++ KA D E Y+ +++ GF
Sbjct: 394 -MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ-GFCQS 451
Query: 419 -------------------PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIH 459
PD S+ +LL LC G++ +A++++ S E D I+
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 460 TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKE 519
+II + A K A +F ++ LD AY + I L R A + +M E
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 520 NGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYS 579
G P+ T N+++ + D ++++EM S FP A S
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS-------------GFP----ADVS 614
Query: 580 TSNLLAEMREMGLLPAKALHALSSDK 605
T ++ M G L L LS+ +
Sbjct: 615 TVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL 324
D A L ++M+ + P V+ + L A ++ + L M S G + +++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRYID 383
I+C + + A + K +PD + L+ +C + R+ + L LV R ++
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE---LVDRMVE 186
Query: 384 ----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
P L+ N L++ L G SDA D M+E GF P++ ++ +L+ +C +G+
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A+++ R + + DA +++II L K G A +F + ++ + D + Y I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
+GR D M + + PN T ++++ +F KE L++ +Q+LKEM+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 2/353 (0%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+ M++ P F+ L +A K L M GI S+ +I+I+ C+
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
L A + ++ G P+ V + TL+ RV++A L + M GH P L+
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVF 379
N L++ G+ DA+ + + + QP+ T L+++C+S L E +
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
R I D V + ++ L K G +A ++ M GF D ++ L+ C AG+ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
K+ R + + +V+I +K GK A + K+ + R + + Y I
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ R +A D M G P+ T N+++ + K + ++ +EM
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 184/428 (42%), Gaps = 13/428 (3%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
++ N ++ +L++ L + G F Y Q+ G P+ + +D + GNL
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 167 TVFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
+++ + PP+ + + + LS K ML N F+SL++
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK-MLGQSIRLNVVVFNSLIDG 505
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
+ +++ EA ++ LM + GI+ V +T ++ G L+ A L M G P+
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
+ Y TLI A+ + + T LF+ M+ + D+ + NV+I K R +DA F
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLV 397
+L + ++PD T + + C R D E +F + P+ V L+ L
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLD---EAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
K A + +M E G P+ ++ L+ + I + K++
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
+++II L K G+ A +F QA+ K D VAYA+ I + GR +A Y+ M
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Query: 518 KENGLKPN 525
NG+KP+
Sbjct: 803 LRNGVKPD 810
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 208/507 (41%), Gaps = 15/507 (2%)
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
C N +F L+ + G F + M+ G P+ A + +D +F+ G L +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 165 ALTVFQQIQPPNFFTFDITLF----HLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
+F Q D+ +F + KRML PN T+ L+
Sbjct: 340 GHKLFSQALHKGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
+ + EA+ + G ++ G++ S+ ++ LI C+ G L L ++M+ G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P+VV Y L+ + + A M ++V++N LID + R +AL V
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 341 FRSLSKQNIQPDPYTLTSWLSM-ICQSRMFDLLPEPALVFRY----IDPD-LVFCNALLS 394
FR + I+PD T T+ + + I + R+ + L L FR ++PD L +C L+
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL---FLFFRMFKMGLEPDALAYCT-LID 574
Query: 395 YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
K P+ + +DLM + D V++ L +I +A K + + E
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
D + +I + A +F+ V + + V + I L ++ A +
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 515 DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRS 574
M E G KPNA T ++ F K D++ ++ +EM I S ++ + + C+
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 575 DAYYSTSNLLAEMREMGLLPAKALHAL 601
+N+ + + LLP +A+
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAI 781
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 157/370 (42%), Gaps = 37/370 (10%)
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
+D + A +LL L++ G +V + LI+ C+ G +D A L + M G P+++
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y+TLI Y ++ + LF+ G D+V+++ ID + K+G A V++ +
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 346 KQNIQPDPYTLTSWLSMICQ-SRMFDLLPEPALVF-RYIDPDLVFCNALLSYLVKAGHPS 403
Q I P+ T T + +CQ R+++ + R ++P +V ++L+ K G+
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSAL-------------------------------- 431
Y+ MI++G+ PD + VL+ L
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 432 ---CAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
C + EA+KV+R + + D T ++ I G+ A +F +
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
D +AY I A + + +D M+ N + + CN+++ +K ++ ++
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 549 LKEMIGSRIE 558
+I ++E
Sbjct: 624 FNNLIEGKME 633
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 4/271 (1%)
Query: 341 FRSLSKQNIQPDPYTLTSWL--SMICQSRMFDLLPEPALVF-RYIDPDLVFCNALLSYLV 397
F L + I+P + ++ ++ C+ + L LV R +V CN +L L
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
A+ L+++ G AP+ +F L++ C G++ A +++ E D
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
++ +I KAG M +F QA+ + LD V ++ I ++SG A Y +M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAY 577
G+ PN T +++ ++ + + M +++ +E S + +L + C+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 578 YSTSNLLAEMREMGLLPAKALHALSSDKYAE 608
S L +M +MG P ++ + D ++
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PNA T+ L++ F K + +++L M GI S+ ++I+I C+ G +D A +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL 324
+ P+VV Y LI+ Y + R+ +A+ L+ HM G PD +L L
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 182/400 (45%), Gaps = 14/400 (3%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
R ++ Y P+ TF +L+N F + EA L+ MV + + + + LI+ C G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+ A L+ M+ G P+ VTY ++ +S A +LF M +V ++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALV 378
++ID K G DAL +F + + I+ D T +S + +C +D +L E ++
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE--MI 307
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
R I PD+V +AL+ VK G +A E Y+ MI G APD ++ L+ C ++
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
EA +++ V E D ++++I KA + +F++ + + + Y +
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
+SG+ A + +M G+ P+ T ++L +L K ++ ++M SR+
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 559 LSDR--NFL--NLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
L N + +CN DA+ +L + + G+ P
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAW----SLFCSLSDKGVKP 523
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 194/459 (42%), Gaps = 53/459 (11%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXX 194
+M YGF P+ ++ + GN LAL +F++++ N
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI----------------- 241
Query: 195 XXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTIL 254
+ + ++++ K + +A L M + GI+ V ++ L
Sbjct: 242 ---------------KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 255 IHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH 314
I C G D K+L+ M+ P+VVT++ LI +++ ++ +A L+N M + G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 315 TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE 374
PD + +N LID K +A +F + + +PD T + ++ C+++ D +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD---D 403
Query: 375 PALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
+FR I P+ + N L+ ++G + A E + M+ G P ++ +LL
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
LC G++ +A++++ S I+ +II + A K A ++F +
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQML 549
D V Y V I L + G +A + +MKE+G P+ T N+++ L +++
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Query: 550 KEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMR 588
+EM +C F S ++L++ R
Sbjct: 584 EEM-------------KVCGFSADSSTIKMVIDMLSDRR 609
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 152/340 (44%), Gaps = 17/340 (5%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ--- 173
+L L ++G A+ + +M+ + ++ +D+ + G+ AL++F +++
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 174 -PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+ T+ + L N + M+ + P+ TF +L++ F K LLEA
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKML-REMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+L M+ GI + LI C+ L AN++ M+ GC P++VTY+ LI +
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
Y ++ RV D LF + S G P+ + +N L+ ++G+ A +F+ + + + P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 353 PYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
T L +C + +F+ + + + + N ++ + A DA
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL-----GIGIYNIIIHGMCNASKVDDA 509
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
+ + + G PD ++ V++ LC G + EA ++R
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 165/397 (41%), Gaps = 41/397 (10%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL-LGL---MVVLGIQFSVNVWTILIHK 257
+ M++ P F+ L +A A + Y L LG M + GI+ + TI+I+
Sbjct: 59 ESMIQSRPLPTPIDFNRLCSAV----ARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 258 HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
+C+ L A +L G P+ +T++TL+ + RV++A L + M PD
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL 377
LV + LI+ GR +AL + + + QPD T L+ +C
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC------------- 221
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
K+G+ + A + + M E +++++ +LC G
Sbjct: 222 --------------------KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
+A+ ++ M + D ++ +I L GK+ A + ++ + R D V ++
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I ++ G+ +A Y++M G+ P+ T N ++ F KE L + NQM M+
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 558 ELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
E + L N C++ L E+ GL+P
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 101 ESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIG 160
E IG + + +F L+ + + G + Y++M + G P+T N +D +
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 161 NLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTF 216
LH A +F + P+ T+ I L + + + PN T+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSI-LINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH 276
++L+ F + L A +L MV G+ SV + IL+ C G L+ A ++ + M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
+ + + Y +I +++V DA +LF + G PD+V +NV+I K G +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 337 ALGVFRSLSKQNIQPDPYT 355
A +FR + + PD +T
Sbjct: 544 ADMLFRKMKEDGCTPDDFT 562
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 5/241 (2%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHL 187
Q + M S G P+ ++ ++++ + + + +F++I PN T++ +
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 188 SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
+ M+ P+ T+ LL+ L +A ++ M +
Sbjct: 431 CQSGKLNAAKELF-QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
+ ++ I+IH C +D A L ++ G P+VVTY +I + +++A LF
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
M+ G TPD +N+LI H ++ + + D T+ + M+ R
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Query: 368 M 368
+
Sbjct: 610 L 610
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 193/459 (42%), Gaps = 42/459 (9%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNX 190
Q++ G N + N+ ++ R A +V ++ P+ TF+ TL
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN-TLIKGLFL 170
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
RM+ P+ T++S++N + A LL M ++ V
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT 230
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
++ +I C+ G +D A L + M G +VVTY +L++ ++ + D + L M
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSR-- 367
S P+++ +NVL+D K G+ Q+A +++ + + I P+ T + + C Q+R
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 368 ----MFDLL-------------------------PEPALVFRYIDPDLVFCNA-----LL 393
M DL+ + VFR I + NA L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE 453
++G A E + M+ G PD ++ +LL LC GK+ +A++++ S +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 454 TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
++T II + K GK A +F + + + Y V I L + G +A
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 514 YDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+M+E+G PN T N ++ ++ DL ++++EM
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 205/482 (42%), Gaps = 20/482 (4%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
+ +F L++ L+ G + +M G P+ N ++ R G+ LAL +
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 170 QQIQPPNF----FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
++++ N FT+ + L K M + T++SL+ K
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF-KEMETKGIKSSVVTYNSLVRGLCK 275
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
+ LL MV I +V + +L+ + G L AN+L + M+ G SPN++T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y TL+ Y NR+++A+N+ + M +PD+V + LI + R D + VFR++S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPS 403
K+ + + T + + CQS L E +V + PD++ LL L G
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
A E ++ + + + ++ +C GK+ +A ++ + + +TV+I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
L K G A + ++ ++ Y I A LR G + ++MK G
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 524 PNAHTCNM---MLFTFYKEKDLQ-------KVNQMLKEMIGS-RIELSDRNFLNLCNFPC 572
+A + M ML + K L+ K Q L E+ GS +I LS F+ + FPC
Sbjct: 576 ADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKM--FPC 633
Query: 573 RS 574
+
Sbjct: 634 NT 635
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 166/387 (42%), Gaps = 6/387 (1%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N T + ++N F + AY +LG ++ LG + + LI G + A L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
M+ GC P+VVTY +++ S + A +L M D+ ++ +ID +
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALVFRYIDPDLV 387
G A+ +F+ + + I+ T S + +C++ ++ LL + +V R I P+++
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD--MVSREIVPNVI 299
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
N LL VK G +A E Y MI G +P+ ++ L+ C ++ EA +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
V + D T +I + VF+ R + V Y++ + +SG+
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A + +M +G+ P+ T ++L L+K ++ +++ S+++L + +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLP 594
C+ NL + G+ P
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 165/395 (41%), Gaps = 55/395 (13%)
Query: 111 PN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
PN +F +LL + + G + Y +M + G PN N MD + L
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS----- 350
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
+ N M+R P+ TF SL+ + +
Sbjct: 351 ----EANNMLDL-----------------------MVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+ + ++ + G+ + ++IL+ CQ G + +A +L Q M+ G P+V+TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
L+ ++ ++ A +F ++ + +V++ +I+ K G+ +DA +F SL +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPS 403
++P+ T T +S +C+ L E ++ R ++ P+ N L+ ++ G +
Sbjct: 504 VKPNVMTYTVMISGLCKK---GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
+A+ + M GF+ D S +++ L +A K G S Q+ +
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQD---------L 611
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+EL + K +++ F V+ +P + + ++ +
Sbjct: 612 LELSGSEKIRLSSLTF----VKMFPCNTITTSLNV 642
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 247 SVNVWTILIHKHCQLGILDV----ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
S++ + + + GI+D+ A L Q M+ + P++V ++ A + +
Sbjct: 48 SISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV 107
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL-S 361
+ + G ++ N++I+C + + A V + K +PD T + +
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 362 MICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ + ++ + + LV R ++ PD+V N++++ + ++G S A + M E
Sbjct: 168 LFLEGKVSEAV---VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
D ++++ ++ +LC G I A+ +++ ++ + ++ L KAGK+ A
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+ K V R+ + + + V + ++ G+ +A Y +M G+ PN T N ++ +
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 538 KEKDLQKVNQMLKEMIGSR 556
+ L + N ML M+ ++
Sbjct: 345 MQNRLSEANNMLDLMVRNK 363
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 178/396 (44%), Gaps = 9/396 (2%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M++ P+ F +L+ K L M V GI + + I+I+ C+
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+A ++ M+ G P+VVT ++LI + + NRV DA +L + M G PD+V++N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS-MICQSRMFD---LLPEPALV 378
+ID K G DA+ +F + + ++ D T S ++ + C R D L+ + +V
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD--MV 236
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
R I P+++ A++ VK G S+A + Y+ M PD +++ L++ LC G++
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
EA ++ V D + +I K+ + +F++ R D + Y I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
++GR A + +M +PN T +++L+ ++K + + M S IE
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
L + + + C+ +L + GL P
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 167/357 (46%), Gaps = 15/357 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M++ Y P+ T SL+N F + + + +A L+ M +G + V ++ +I C++G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+++ A +L M G + VTY +L+ S R +DA+ L M P+++ +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-------SRMFDLLPEP 375
+ID K G+ +A+ ++ ++++ + PD +T S ++ +C +M DL+
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+ PD+V N L++ K+ + + + M + G D ++ ++ AG
Sbjct: 309 GCL-----PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
+ A +++ M S+ + R +++++ L + A +F+ + LD Y
Sbjct: 364 RPDAAQEIF--SRMDSR-PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ I + + G DA + + GLKP+ + M+ F +++ K + + ++M
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 8/288 (2%)
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
L M+ + P++V ++ ++ +S +LF+HM G DL +N++I+C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRMFDLL----PEPALVFRYIDP 384
+ R AL V + K +PD T++S ++ CQ +R+FD + + FR P
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR---P 172
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
D+V N ++ K G +DA E +D M G D ++ L++ LC +G+ +A ++
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRS 504
R VM + T +I +K GK+ A ++++ R D Y I L
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 505 GRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
GR +A D M G P+ T N ++ F K K + + ++ +EM
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 75/321 (23%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP--------------------- 174
+M+ GF P+ N +D +IG ++ A+ +F +++
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 175 ------------------PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTF 216
PN TF + + + M R P+ T+
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITF-TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH 276
+SL+N + EA Q+L LMV G V + LI+ C+ +D KL + M
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 277 TGCSPNVVTYTTLIKAYMESN--------------------------------RVTDASN 304
G + +TY T+I+ Y ++ RV A
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
LF +M+ + D+ +N++I K G +DA +FRSLS + ++PD + T+ +S C
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 365 QSRMFDLLPEPALVFRYIDPD 385
+ R +D + L++R + D
Sbjct: 463 RKRQWD---KSDLLYRKMQED 480
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 201/489 (41%), Gaps = 42/489 (8%)
Query: 106 ILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARN----LFMDAHFRIGN 161
I+ ++ N++L + + L G A +M+ +GFV N ++ N L + + F
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 207
Query: 162 LHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLN 221
+ + + + P+ T+ + L K M + PN TF +
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL-KEMETLGLKPNVYTFTICIR 266
Query: 222 AFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP 281
+ + EAY++L M G V +T+LI C LD A ++ + M P
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG--------- 332
+ VTY TL+ + ++ + ++ M GH PD+V + +L+D KAG
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 333 --------------------------RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
R DAL +F ++ ++P YT ++ +S
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 367 --RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+ L + + I P++V CNA L L KAG +A + + + ++G PD ++
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
+++ G+I EA+K+ + + E D + +I L KA + A +F +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
K V Y + L ++G+ +A ++ M + G PN T N + K ++
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 545 VNQMLKEMI 553
+ML +M+
Sbjct: 627 ALKMLFKMM 635
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 20/371 (5%)
Query: 69 RDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPN--SFLLLLRILWRAGM 126
RD S+ +VP++ R + +H + E L P ++ LL+ L A M
Sbjct: 746 RDGDSI----LVPII-RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM 800
Query: 127 HAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDI 182
+ + Q++S G +P+ N +DA+ + G + +++++ N T +I
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 183 TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVL 242
+ L M + P A T+ L++ K L EA QL M+
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G + + ++ ILI+ + G D A L + M+ G P++ TY+ L+ RV +
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL-SKQNIQPDPYTLTSWLS 361
+ F ++ +G PD+V +N++I+ K+ R ++AL +F + + + I PD YT + S
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT---YNS 1037
Query: 362 MICQSRMFDLLPEPALVFRYI-----DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
+I + ++ E ++ I +P++ NAL+ +G P A Y M+ G
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Query: 417 FAPDKYSFAVL 427
F+P+ ++ L
Sbjct: 1098 FSPNTGTYEQL 1108
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 199/484 (41%), Gaps = 45/484 (9%)
Query: 82 VLGRLTRRHKTLQAILL--QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQS 139
+L L + K +AI L + GC N +F L L + + + +M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGC--PPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 140 YGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP---PNFFTFDITLFHLSNXXXXXXX 196
G VP+ F N + + G + A+ F Q++ P+F T L +
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 197 XXXXXKRMLRMHYYPNANTF-HSLLNAFFKMDALLEAYQLLGLMVVLGI-QFSVNVWTIL 254
+ P AN F L+ + + A +V GI + ++ +
Sbjct: 697 YKIITNFLYNCADQP-ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 255 IHKHCQLGILDVANKLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
I C+ + A L + G P + TY LI +E++ + A ++F ++S G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP 373
PD+ +N L+D + K+G+ + +++ +S + + T
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH----------------- 858
Query: 374 EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE-FYDLMIELGFAPDKYSFAVLLSALC 432
N ++S LVKAG+ DA + +YDLM + F+P ++ L+ L
Sbjct: 859 ----------------NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
+G++YEA +++ G + + I+ ++I KAG+ A +FK+ V D
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
Y+V + L GR + ++ ++KE+GL P+ N+++ K L++ + EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 553 IGSR 556
SR
Sbjct: 1023 KTSR 1026
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 123/546 (22%), Positives = 214/546 (39%), Gaps = 63/546 (11%)
Query: 121 LWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTF 180
L +AG Q ++ ++ G VP++ N+ M + ++G + A+ + ++
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 181 DITLFHLSNXXXXXXXXXXXXK---RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLG 237
I + L N K RM M P T+++LL K + EA +L
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 238 LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESN 297
MV G + + L C+ + +A K+L M+ GC P+V TY T+I +++
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 298 RVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLT 357
+V +A F+ M+ + PD V L+ KA +DA + + N P L
Sbjct: 658 QVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFL-YNCADQPANLF 715
Query: 358 SWLSMI------------------------CQSRMFDLLPEPALVFRY------------ 381
W +I C+ L+P + RY
Sbjct: 716 -WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP----IIRYSCKHNNVSGART 770
Query: 382 ----------IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
+ P L N L+ L++A A + + + G PD ++ LL A
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 432 CAAGKIYEAVKVYRGGVMSSQETDARI--HTVIIVELIKAGKYLMAATVFKQAVV-RKYP 488
+GKI E ++Y+ MS+ E +A H ++I L+KAG A ++ + R +
Sbjct: 831 GKSGKIDELFELYK--EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
Y I L +SGR +A ++ M + G +PN N+++ F K + +
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 549 LKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAE 608
K M+ + + + L + C + E++E GL P + L + +
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 609 S--LEE 612
S LEE
Sbjct: 1009 SHRLEE 1014
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 139/297 (46%), Gaps = 6/297 (2%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
LG+Q + + +LI + ++++A + + TGC P+V TY L+ AY +S ++ +
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL-SKQNIQPDPYTLTSWL 360
L+ M + + + N++I KAG DAL ++ L S ++ P T +
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 361 SMICQS-RMFDL--LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ +S R+++ L E L + P+ N L++ KAG A + M++ G
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYG-CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
PD +++VL+ LC G++ E + ++ S D + +II L K+ + A
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 478 VFKQ-AVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
+F + R D Y I L +G +A Y++++ GL+PN T N ++
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 213/515 (41%), Gaps = 51/515 (9%)
Query: 86 LTRRHKTLQAILL--QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
L R H+ A+ L +ES+G + ++++ + ++G + + +M++ G
Sbjct: 408 LLRVHRLDDALELFGNMESLG--VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXX 199
PN A N + + + G A +F ++ P+ T+++ + S
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
+ M+ P+ +SL+N +K D + EA+++ M + ++ +V + L+
Sbjct: 526 LSE-MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G + A +L + M+ GC PN +T+ TL +++ VT A + M G PD+
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVF 644
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR------------ 367
+N +I K G+ ++A+ F + K+ + PD TL + L + ++
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 368 MFDLLPEPALVF-----------RYIDPDLVFCNALLS----------------YLVKAG 400
+++ +PA +F ID + F L++ Y K
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 401 HPSDAAEFYD-LMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIH 459
+ S A ++ +LG P ++ +L+ L A I A V+ + D +
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 460 TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT-FYDQMK 518
++ K+GK ++K+ + + + + + I L+++G DA +YD M
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
+ P A T ++ K L + Q+ + M+
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 139/328 (42%), Gaps = 51/328 (15%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T++ LL+A+ K + E ++L M + + I+I + G +D A L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 271 LQNMLHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+++ SP TY LI +S R+ +A LF M G P+ ++N+LI+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRM------FDLLPEPALVFRYI 382
KAG A +F+ + K+ ++PD T + + +C R+ F L E L
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL----- 992
Query: 383 DPDLVFCNALLSYLVKAGHPSDA-AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+PD+V N +++ L K+ +A F ++ G PD Y++ L+ L AG + EA
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK-QAVVRKYPLDNVAYAVGICA 500
K+Y E+ +AG + VF A++R Y L
Sbjct: 1053 KIYN-------------------EIQRAG---LEPNVFTFNALIRGYSL----------- 1079
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHT 528
SG+ A Y M G PN T
Sbjct: 1080 ---SGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 148/374 (39%), Gaps = 38/374 (10%)
Query: 224 FKMDALLE--AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP 281
++D LE AY + LM I+ N + + G L A L+ M G
Sbjct: 128 LRVDGKLEEMAY-VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVL 186
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
N +Y LI ++S T+A ++ M G P L ++ L+ K +G+
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
+ + ++P+ YT T IC + L +AG
Sbjct: 247 KEMETLGLKPNVYTFT-----IC----------------------------IRVLGRAGK 273
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
++A E M + G PD ++ VL+ ALC A K+ A +V+ + D R+ +
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD-RVTYI 332
Query: 462 IIVELIKAGKYLMAATVFKQAVVRK-YPLDNVAYAVGICALLRSGRTPDACTFYDQMKEN 520
+++ + L + F + + + D V + + + AL ++G +A D M++
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 521 GLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYST 580
G+ PN HT N ++ + L ++ M ++ + ++ ++ +S S
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 581 SNLLAEMREMGLLP 594
+M+ G+ P
Sbjct: 453 LETFEKMKTKGIAP 466
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 181/433 (41%), Gaps = 49/433 (11%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ F + +NAF K + EA +L M G+ +V + +I G D A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ M+ G P ++TY+ L+K + R+ DA + M G P+++++N LID +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 331 AGRHQDALGV---------------FRSLSK---QNIQPD-----------------PYT 355
AG A+ + + +L K +N Q D +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 356 LTSWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
TS + ++C MFD L ++ R + P L+S L K G S A E + +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAVKVY-----RGGVMSSQETDARIHTVIIVELIK 468
GF D + LL LC AGK+ EA ++ RG VM R+ ++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD------RVSYNTLISGCC 551
Query: 469 AGKYLMAATVF-KQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
K L A +F + V R DN Y++ IC L + +A F+D K NG+ P+ +
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEM 587
T ++M+ K + ++ + EM+ ++ + + +L CRS L +M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 588 REMGLLPAKALHA 600
+ G+ P A +
Sbjct: 672 KHKGISPNSATYT 684
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 210/528 (39%), Gaps = 44/528 (8%)
Query: 110 NPNSFLLLLRI--LWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
+P+ +L I + G + + +M+ G PN N +D G A
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 168 VFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+++ P T+ I + L+ K M + + PN +++L+++F
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL-KEMTKKGFPPNVIVYNNLIDSF 375
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
+ +L +A ++ LMV G+ + + + LI +C+ G D A +LL+ ML G + N
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
++T++I A M +P L LI K G+H AL ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
+ D T + L +C++ D + ++ R D V N L+S
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
+A F D M++ G PD Y++++L+ L K+ EA++ + + D ++V
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR--------------- 506
+I KA + F + + + + V Y I A RSGR
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 507 -TPDACTF-------------------YDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
+P++ T+ +++M+ GL+PN ++ + K + KV
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 547 QMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+L+EM + + + + R S LL EMRE G++P
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 144/338 (42%), Gaps = 2/338 (0%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
ML + P +L++ K +A +L + G L+H C+ G
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A ++ + +L GC + V+Y TLI ++ +A + M G PD +++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRY 381
LI + ++A+ + + + PD YT + + C++ + E ++ +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ P+ V N L+ ++G S A E + M G +P+ ++ L+ + ++ EA
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
++ M E + +T +I K G+ + + ++ + + + Y V I
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKE 539
R G +A ++M+E G+ P++ T ++ + K+
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 38/230 (16%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX 193
+ +M S PNT N + A+ R G L +AL + + ++
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI---------------- 676
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
PN+ T+ SL+ + + EA L M + G++ +V +T
Sbjct: 677 ----------------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
LI + +LG + LL+ M PN +TYT +I Y VT+AS L N MR G
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI 363
PD + + I + K G GV + + + + W +I
Sbjct: 781 IVPDSITYKEFIYGYLKQG------GVLEAFKGSDEENYAAIIEGWNKLI 824
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 1/263 (0%)
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEP-ALVFRYIDPDLVFCNALLSY 395
AL VF L+ + + P T L+ + ++ F E +V + + PD+ ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 396 LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETD 455
K G +A + + M E G AP+ +F ++ L G+ EA V E
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 456 ARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYD 515
+++++ L +A + A V K+ + +P + + Y I + + +G A D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 516 QMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSD 575
M GL + T N ++ + K ++LKEM+ ++ +F ++ C
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 576 AYYSTSNLLAEMREMGLLPAKAL 598
+ S + EM + P L
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGL 472
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 5/234 (2%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFH 186
F +M G P+ + ++ + F + + A+ + + P+ +T+ + +
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
+ M+ + PN ++ L+ A+ + L A +L M GI
Sbjct: 620 CCKAERTEEGQEFFDE-MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ +T LI + ++ A L + M G PNV YT LI Y + ++ L
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
M S P+ + + V+I +++ G +A + + ++ I PD T ++
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 181/433 (41%), Gaps = 49/433 (11%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ F + +NAF K + EA +L M G+ +V + +I G D A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ M+ G P ++TY+ L+K + R+ DA + M G P+++++N LID +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 331 AGRHQDALGV---------------FRSLSK---QNIQPD-----------------PYT 355
AG A+ + + +L K +N Q D +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 356 LTSWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
TS + ++C MFD L ++ R + P L+S L K G S A E + +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAVKVY-----RGGVMSSQETDARIHTVIIVELIK 468
GF D + LL LC AGK+ EA ++ RG VM R+ ++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD------RVSYNTLISGCC 551
Query: 469 AGKYLMAATVF-KQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
K L A +F + V R DN Y++ IC L + +A F+D K NG+ P+ +
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEM 587
T ++M+ K + ++ + EM+ ++ + + +L CRS L +M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 588 REMGLLPAKALHA 600
+ G+ P A +
Sbjct: 672 KHKGISPNSATYT 684
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 210/528 (39%), Gaps = 44/528 (8%)
Query: 110 NPNSFLLLLRI--LWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
+P+ +L I + G + + +M+ G PN N +D G A
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 168 VFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+++ P T+ I + L+ K M + + PN +++L+++F
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL-KEMTKKGFPPNVIVYNNLIDSF 375
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
+ +L +A ++ LMV G+ + + + LI +C+ G D A +LL+ ML G + N
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
++T++I A M +P L LI K G+H AL ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
+ D T + L +C++ D + ++ R D V N L+S
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
+A F D M++ G PD Y++++L+ L K+ EA++ + + D ++V
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR--------------- 506
+I KA + F + + + + V Y I A RSGR
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 507 -TPDACTF-------------------YDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
+P++ T+ +++M+ GL+PN ++ + K + KV
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 547 QMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+L+EM + + + + R S LL EMRE G++P
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 144/338 (42%), Gaps = 2/338 (0%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
ML + P +L++ K +A +L + G L+H C+ G
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A ++ + +L GC + V+Y TLI ++ +A + M G PD +++
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRY 381
LI + ++A+ + + + PD YT + + C++ + E ++ +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ P+ V N L+ ++G S A E + M G +P+ ++ L+ + ++ EA
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
++ M E + +T +I K G+ + + ++ + + + Y V I
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKE 539
R G +A ++M+E G+ P++ T ++ + K+
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 38/230 (16%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX 193
+ +M S PNT N + A+ R G L +AL + + ++
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI---------------- 676
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
PN+ T+ SL+ + + EA L M + G++ +V +T
Sbjct: 677 ----------------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
LI + +LG + LL+ M PN +TYT +I Y VT+AS L N MR G
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI 363
PD + + I + K G GV + + + + W +I
Sbjct: 781 IVPDSITYKEFIYGYLKQG------GVLEAFKGSDEENYAAIIEGWNKLI 824
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 1/263 (0%)
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEP-ALVFRYIDPDLVFCNALLSY 395
AL VF L+ + + P T L+ + ++ F E +V + + PD+ ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 396 LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETD 455
K G +A + + M E G AP+ +F ++ L G+ EA V E
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 456 ARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYD 515
+++++ L +A + A V K+ + +P + + Y I + + +G A D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 516 QMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSD 575
M GL + T N ++ + K ++LKEM+ ++ +F ++ C
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 576 AYYSTSNLLAEMREMGLLPAKAL 598
+ S + EM + P L
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGL 472
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 5/234 (2%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFH 186
F +M G P+ + ++ + F + + A+ + + P+ +T+ + +
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
+ M+ + PN ++ L+ A+ + L A +L M GI
Sbjct: 620 CCKAERTEEGQEFFDE-MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ +T LI + ++ A L + M G PNV YT LI Y + ++ L
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
M S P+ + + V+I +++ G +A + + ++ I PD T ++
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 180/416 (43%), Gaps = 3/416 (0%)
Query: 182 ITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVV 241
+ +FH S + M+R Y P+ L+ FF + + +A +++ ++
Sbjct: 93 LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
G Q V + LI+ C++ +D A ++L M SP+ VTY +I + ++
Sbjct: 153 FG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
A + N + S P ++ + +LI+ G +AL + + + ++PD +T + +
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 362 MICQSRMFDLLPEPA--LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAP 419
+C+ M D E L + +PD++ N LL L+ G + + M P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 420 DKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVF 479
+ ++++L++ LC GKI EA+ + + DA + +I + G+ +A
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 480 KQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKE 539
+ + D V Y + L ++G+ A + ++ E G PN+ + N M +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 540 KDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA 595
D + M+ EM+ + I+ + + ++ + CR LL +MR P+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 192/417 (46%), Gaps = 11/417 (2%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXX 199
P+ FA N ++ ++ + A V +++ P+ T++I + L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
++L + P T+ L+ A + EA +L+ M+ G++ + + +I C
Sbjct: 216 L-NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G++D A ++++N+ GC P+V++Y L++A + + + L M S P++V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PAL 377
+++LI + G+ ++A+ + + + ++ + PD Y+ ++ C+ D+ E +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ PD+V N +L+ L K G A E + + E+G +P+ S+ + SAL ++G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
A+ + + + + D + +I L + G A + ++ V Y +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML----FTFYKEKDLQKVNQMLK 550
+ ++ R DA + M NG +PN T +++ F Y+ + ++ N +++
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 193/454 (42%), Gaps = 23/454 (5%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSY---GFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
+L+I R+ + ++ H +++ G+ P+ + F + N+ A+ V + ++
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE 151
Query: 174 P---PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALL 230
P+ F ++ L + RM + P+ T++ ++ + L
Sbjct: 152 KFGQPDVFAYN-ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
A ++L ++ Q +V +TILI G +D A KL+ ML G P++ TY T+I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+ + V A + ++ G PD++ +N+L+ G+ ++ + + +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 351 PDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPS 403
P+ T + ++ +C+ + L+ E L PD + L++ + G
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT-----PDAYSYDPLIAAFCREGRLD 385
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR--GGVMSSQETDARIHTV 461
A EF + MI G PD ++ +L+ LC GK +A++++ G V S + + +
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS--YNT 443
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
+ L +G + A + + + D + Y I L R G +A M+
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 522 LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS 555
P+ T N++L F K ++ +L+ M+G+
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 16/387 (4%)
Query: 67 RRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGM 126
R +D TV + + ++G L R K + L L+ + +L+ N ++ IL A M
Sbjct: 185 RSKDFSPDTVTYNI-MIGSLCSRGK----LDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 127 HA----MFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFF 178
+ +M S G P+ F N + + G + A + + ++ P+
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
+++I L L N K M PN T+ L+ + + EA LL L
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTK-MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
M G+ + LI C+ G LDVA + L+ M+ GC P++V Y T++ ++ +
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
A +F + G +P+ +N + +G AL + + I PD T S
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 359 WLSMICQSRMFDLLPEPALVFRYID--PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
+S +C+ M D E + R + P +V N +L KA DA + M+ G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 417 FAPDKYSFAVLLSALCAAGKIYEAVKV 443
P++ ++ VL+ + AG EA+++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 108/243 (44%), Gaps = 7/243 (2%)
Query: 110 NPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
+PN ++ +L+ L R G M+ G P+ ++ + + A R G L +A+
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 168 VFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+ + P+ ++ L L K + + PN+++++++ +A
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK-LGEVGCSPNSSSYNTMFSAL 448
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
+ + A ++ M+ GI + +I C+ G++D A +LL +M P+V
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
VTY ++ + +++R+ DA N+ M G P+ + VLI+ AG +A+ +
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Query: 344 LSK 346
L +
Sbjct: 569 LVR 571
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 162/346 (46%), Gaps = 6/346 (1%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ Y P+ T +SLLN F + + +A L+ MV +G + +T LIH
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A L+ M+ GC P++VTY ++ + A NL N M +A ++V+++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRMFD---LLPEPALV 378
+ID K DAL +F + + ++P+ T +S +S +C R D LL + ++
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD--MI 315
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
R I+P+LV +AL+ VK G A + Y+ MI+ P+ ++++ L++ C ++
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
EA ++ + + + +I KA + +F++ R + V Y I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
++ +A + QM G+ PN T N++L K L K
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 159/335 (47%), Gaps = 6/335 (1%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+ M Y P+ TF +L++ F + EA L+ MV G Q + + +++ C+ G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
D+A LL M NVV Y+T+I + + DA NLF M + G P+++ ++
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALV 378
LI C GR DA + + ++ I P+ T ++ + + + L E ++
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE--MI 350
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
R IDP++ ++L++ +A + +LMI P+ ++ L++ C A ++
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+ ++++R + +T +I +A A VFKQ V + + Y + +
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
L ++G+ A ++ ++ + ++P+ +T N+M+
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 203/503 (40%), Gaps = 53/503 (10%)
Query: 28 HKTVTAPVSYSYSYSSETKRENVRSSDLIALSCFFWSSQRRRDHQSVTVDHMVPVLGRLT 87
+ + SY Y T ++ D I L F +Q R + ++ + ++
Sbjct: 35 RRAFSGKTSYDYREVLRTGLSDIELDDAIGL--FGVMAQSRPFPSIIEFSKLLSAIAKMN 92
Query: 88 RRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTF 147
+ + + ++E +G ++ N ++ +L+ R ++ +M G+ P+
Sbjct: 93 KFDLVI-SFGEKMEILG--ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 148 ARNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
N ++ + A+ + Q+ P+ TF TL H R
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF-TTLIHGLFLHNKASEAVALIDR 208
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ P+ T+ +++N K A LL M I+ +V +++ +I C+
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
D A L M + G PNV+TY++LI R +DAS L + M P+LV ++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPA-----LV 378
LID K G+ A ++ + K++I P+ +T +S ++ C M D L E ++
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC---MLDRLGEAKQMLELMI 385
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFY----------------------------- 409
+ P++V N L++ KA E +
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 410 ------DLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
M+ +G P+ ++ +LL LC GK+ +A+ V+ S+ E D + ++I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 464 VELIKAGKYLMAATVFKQAVVRK 486
+ KAGK+ M F + +++
Sbjct: 506 EGMCKAGKWKMGGIYFVASALKE 528
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 8/336 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A L M + P+++ ++ L+ A + N+ + M G + +L +N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRMFDLLPEPALVFRYI 382
LI+C + R AL + + K +PD TL S L+ C +R+ D + ALV + +
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV---ALVDQMV 175
Query: 383 D----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ PD V L+ L S+A D M++ G PD ++ +++ LC G
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
A+ + + E + I++ +I L K A +F + + + + Y+ I
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
L GR DA M E + PN T + ++ F K+ L K ++ +EMI I+
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + +L N C D +L M LP
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 121/301 (40%), Gaps = 8/301 (2%)
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y +++ + + DA LF M + P ++ ++ L+ +K + + +
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 346 KQNIQPDPYTLTSWLSMICQ--SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPS 403
I + YT ++ C+ L ++ +PD+V N+LL+ S
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
DA D M+E+G+ PD +F L+ L K EAV + V + D + ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
L K G +A + + K + V Y+ I +L + DA + +M+ G++
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNL 583
PN T + ++ +++L +MI +I NL F DA+ L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN------PNLVTFSALIDAFVKKGKL 339
Query: 584 L 584
+
Sbjct: 340 V 340
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 189/443 (42%), Gaps = 18/443 (4%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
L + + + +L + ++ G+++ + +M S G PN + +++ R + A
Sbjct: 195 LVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE 254
Query: 167 TVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
+F+ ++ PN +T+ + K +L PN F +L++
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY-KEILVAELLPNVVVFGTLVDG 313
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
F K L+ A L MV G+ ++ V+ LIH HC+ G + A LL M SP+
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
V TYT LI ++V +A+ LF M++ P +N LI + K + AL +
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF----RYIDPDLVFCNALLSYLVK 398
++ ++P+ T ++ + C R D+ L F + I PD+V AL+ K
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVR--DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFK 491
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI 458
+ +A Y M+E G P+ ++FA L+ G++ A+ Y+ ++Q+
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE---NNQQRSCWN 548
Query: 459 H---TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYD 515
H T +I L + G L A+ F D +Y + L+ R D
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608
Query: 516 QMKENGLKPNAHTCNMMLFTFYK 538
M + G+ PN N +L FY+
Sbjct: 609 DMIKTGILPNLLV-NQLLARFYQ 630
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 186/479 (38%), Gaps = 59/479 (12%)
Query: 163 HLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
H + IQ P F +L + R M P++ S+LN
Sbjct: 116 HRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR--EMKCSPDSKACLSILNG 173
Query: 223 FFK---MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGC 279
+ D++ YQL M+ G+ V+++ +L + G+ KLL M G
Sbjct: 174 LVRRRRFDSVWVDYQL---MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI 230
Query: 280 SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
PNV YT I N++ +A +F M+ G P+L ++ +ID + K G + A G
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 340 VFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY----IDPDLVFCNALLSY 395
+++ + + P+ + + C++R +L+ +L +DP+L N L+
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKAR--ELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 396 LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV------- 448
K+G+ +A M L +PD +++ +L++ LC ++ EA ++++
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 449 ----------------------MSSQETDARIHTVII-----------VELIKAGKYLMA 475
+ S+ T + + II V IKA A
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA-----A 463
Query: 476 ATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFT 535
++ + ++ D V Y I A + +A Y M E G+ PN HT ++
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 536 FYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
F+KE L +E R + F L C++ S ++MR G+ P
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 212/522 (40%), Gaps = 62/522 (11%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
N SF +L++ + + ++ GF P+ N + + AL +F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 170 QQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
+ F + LF +M+ + P TF++L+N +
Sbjct: 200 GYMVETGFLE-AVALF----------------DQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
LEA L+ MV G+ V + +++ C++G A LL M T P+VV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
I + +DA LF+ M G P++ +N +ID GR DA + R + ++ I
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 350 QPDPYTLTSWLSM-ICQSRMFD---LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
PD T + +S + + ++F+ L E ++ R I PD V N+++ K DA
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDE--MLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR-----GGVMSSQETDARIHT 460
+DLM +PD +F ++ C A ++ E +++ R G V ++ + IH
Sbjct: 421 KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 461 VIIVELIKAGKYLM------------------------------AATVFKQAVVRKYPLD 490
V+ + A + L A +F+ + K LD
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
VAY + I + + + +A + + +G++P+ T N+M+ F + + N +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 551 EMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
+M + E + + L ++ + L++EMR G
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 173/410 (42%), Gaps = 25/410 (6%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+R + A + ++ F +M+ A L M + I ++ + ILI C
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH--------- 314
L + + G P+VVT+ TL+ +R+++A LF +M G
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 315 ------TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
TP ++ +N LI+ GR +A + + + + D T + ++ +C +M
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC--KM 274
Query: 369 FDLLPEPALVFR----YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
D L+ + +I PD+V +A++ L K GH SDA + M+E G AP+ +++
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
++ C+ G+ +A ++ R + D +I +K GK A + + +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
R D V Y I + R DA +D M P+ T N ++ + + K + +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDE 450
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
Q+L+E+ + + + L + C D + +L EM G+ P
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 128/332 (38%), Gaps = 20/332 (6%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A M+ + V +I ++ NR A +L+ M ++ +N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRYI 382
LI C + +L F L+K QPD T + L +C + R+ + L
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL---------- 196
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
AL Y+V+ G +A +D M+E+G P +F L++ LC G++ EA
Sbjct: 197 --------ALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
+ V D + I+ + K G A + + D V Y+ I L
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR 562
+ G DA + +M E G+ PN T N M+ F ++L++MI I
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 563 NFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
F L + + + L EM + P
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M + P+ TF+++++ + + + E QLL + G+ + + LIH C++
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
L+ A L Q M+ G P+ +T L+ + E+ ++ +A LF ++ + D V +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N++I K + +A +F SL ++PD T +S C + + ++F
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA---ISDANVLFHK 597
Query: 382 I-----DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
+ +PD N L+ +KAG + E M GF+ D ++ + +C
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 109/274 (39%), Gaps = 38/274 (13%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F ++ + RA Q ++ G V NT N + + NL+ A +FQ+
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE- 492
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
M+ P+ T + LL F + + L EA
Sbjct: 493 -------------------------------MISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+L ++ + I + I+IH C+ +D A L ++ G P+V TY +I
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ + ++DA+ LF+ M+ GH PD +N LI KAG ++ + + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 353 PYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDL 386
+T+ +IC+ + + ++ Y+ P +
Sbjct: 642 AFTIKMAEEIICR------VSDEEIIENYLRPKI 669
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 177/427 (41%), Gaps = 49/427 (11%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P ++++LLNAF + ++ L G+ ++ + +LI C+ + A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH-- 328
L M G P+V +Y+T+I ++ ++ DA LF+ M G PD+ +N+LID
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 329 ----------------------------------SKAGRHQDALGVFRSLSKQNIQPDPY 354
SK GR D L ++ + + + D Y
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 355 TLTSWLSMICQSRMFDLLPEPALVFRYIDP-----DLVFCNALLSYLVKAGHPSDAAEFY 409
T +S + +C + D + VF +D D+V N +L + G ++ E +
Sbjct: 292 TYSSLIHGLCDAGNVD---KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 410 DLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKA 469
+M E + + S+ +L+ L GKI EA ++R D + + I L
Sbjct: 349 RIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 470 GKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTC 529
G A V ++ LD AYA I L + R +A +M ++G++ N+H C
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 530 NMMLFTFYKEKDLQKVNQMLKEMI--GSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEM 587
N ++ ++ L + + L+EM G R + N L +C C++ + S + EM
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL-ICGL-CKAGKFGEASAFVKEM 525
Query: 588 REMGLLP 594
E G P
Sbjct: 526 LENGWKP 532
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 186/463 (40%), Gaps = 44/463 (9%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
S+ ++ L +AG + + +M G P+ N+ +D + + A+ ++ ++
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 173 QP-----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
PN T +I + LS +RM + + T+ SL++
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW-ERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+ +A + + V + ++ C+ G + + +L + M H S N+V+Y
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
LIK +E+ ++ +A+ ++ M + G+ D + + I G ALGV + +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 348 NIQPDPYTLTSWLSMICQSRMFD--------------------------------LLPEP 375
D Y S + +C+ + + L E
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 376 ALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
+ R + P +V N L+ L KAG +A+ F M+E G+ PD ++++LL
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
LC KI A++++ + S ETD +H ++I L GK A TV R +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
V Y + + G + A + M + GL+P+ + N ++
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 13/249 (5%)
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
GC P + +Y TL+ A++E+ + +LF + +AG P+L +NVLI K + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCN 390
G + K+ +PD ++ ++ ++ + ++ +FD + E R + PD+ N
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE-----RGVAPDVTCYN 223
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIE-LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
L+ +K A E +D ++E P+ + +++S L G++ + +K++
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ +E D ++ +I L AG A +VF + RK +D V Y + R G+ +
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343
Query: 510 ACTFYDQMK 518
+ + M+
Sbjct: 344 SLELWRIME 352
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K ML + P+ T+ LL + + A +L + G++ V + ILIH C +
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G LD A ++ NM H C+ N+VTY TL++ + + A+ ++ +M G PD++ +
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 322 NVLID--CHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
N ++ C + + A+ F I P YT
Sbjct: 643 NTIMKGLCMCRGVSY--AMEFFDDARNHGIFPTVYT 676
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 156/386 (40%), Gaps = 21/386 (5%)
Query: 57 ALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQ--AILLQLESIGCILTKNPNSF 114
A S F +R+ VT + M+ R + ++L+ I+ S+ N S+
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV------NIVSY 362
Query: 115 LLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP 174
+L++ L G + M + G+ + +F+ G ++ AL V Q+++
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 175 PNFFTFDI----TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALL 230
D+ ++ K M + N++ ++L+ + L
Sbjct: 423 SGGH-LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
EA L M G + +V + ILI C+ G A+ ++ ML G P++ TY+ L+
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
++ A L++ +G D+++ N+LI G+ DA+ V ++ +N
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 351 PDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDA 405
+ T + + + + +++ Y + PD++ N ++ L S A
Sbjct: 602 ANLVTYNTLMEGFFKVGDSN---RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSAL 431
EF+D G P Y++ +L+ A+
Sbjct: 659 MEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 120/281 (42%), Gaps = 4/281 (1%)
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
H G + + V Y +++ E+ V S + +RS D + +I + K
Sbjct: 36 HPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPD 95
Query: 336 DALGVFRSLSKQ-NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVFCNAL 392
AL VF+ + + +P + + L+ +++ + + F + P+L N L
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
+ K A F D M + GF PD +S++ +++ L AGK+ +A++++
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV-AYAVGICALLRSGRTPDAC 511
D + ++I +K + A ++ + + NV + + I L + GR D
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 512 TFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+++MK+N + + +T + ++ ++ K + E+
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 212/522 (40%), Gaps = 62/522 (11%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
N SF +L++ + + ++ GF P+ N + + AL +F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 170 QQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
+ F + LF +M+ + P TF++L+N +
Sbjct: 200 GYMVETGFLEA-VALF----------------DQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
LEA L+ MV G+ V + +++ C++G A LL M T P+VV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
I + +DA LF+ M G P++ +N +ID GR DA + R + ++ I
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 350 QPDPYTLTSWLSM-ICQSRMFD---LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
PD T + +S + + ++F+ L E ++ R I PD V N+++ K DA
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDE--MLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR-----GGVMSSQETDARIHT 460
+DLM +PD +F ++ C A ++ E +++ R G V ++ + IH
Sbjct: 421 KHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 461 VIIVELIKAGKYLM------------------------------AATVFKQAVVRKYPLD 490
V+ + A + L A +F+ + K LD
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
VAY + I + + + +A + + +G++P+ T N+M+ F + + N +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 551 EMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
+M + E + + L ++ + L++EMR G
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 173/410 (42%), Gaps = 25/410 (6%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+R + A + ++ F +M+ A L M + I ++ + ILI C
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH--------- 314
L + + G P+VVT+ TL+ +R+++A LF +M G
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 315 ------TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
TP ++ +N LI+ GR +A + + + + D T + ++ +C +M
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC--KM 274
Query: 369 FDLLPEPALVFR----YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
D L+ + +I PD+V +A++ L K GH SDA + M+E G AP+ +++
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
++ C+ G+ +A ++ R + D +I +K GK A + + +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
R D V Y I + R DA +D M P+ T N ++ + + K + +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDE 450
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
Q+L+E+ + + + L + C D + +L EM G+ P
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M + P+ TF+++++ + + + E QLL + G+ + + LIH C++
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
L+ A L Q M+ G P+ +T L+ + E+ ++ +A LF ++ + D V +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N++I K + +A +F SL ++PD T +S C + + ++F
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA---ISDANVLFHK 597
Query: 382 I-----DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+ +PD N L+ +KAG + E M GF+ D ++ +++ L G+
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGR 656
Query: 437 I 437
+
Sbjct: 657 L 657
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 32/256 (12%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F ++ + RA Q ++ G V NT N + + NL+ A +FQ+
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE- 492
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
M+ P+ T + LL F + + L EA
Sbjct: 493 -------------------------------MISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+L ++ + I + I+IH C+ +D A L ++ G P+V TY +I
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ + ++DA+ LF+ M+ GH PD +N LI KAG ++ + + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 353 PYTLTSWLSMICQSRM 368
+T+ +I R+
Sbjct: 642 AFTIKMVADLITDGRL 657
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 185/437 (42%), Gaps = 40/437 (9%)
Query: 121 LWRAGM--HAMFFQA---YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP- 174
+W G+ H F +A QM G P+ ++ N+ MD ++G L A T+ ++
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 175 ---PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
P+ T+ L H + M+R + PNA T + LL++ +KM + E
Sbjct: 391 GVCPDAVTYG-CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM----------------- 274
A +LL M G I++ C G LD A ++++ M
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 275 ------LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ C P+++TY+TL+ ++ R +A NLF M PD V +N+ I
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSW-LSMICQSRMFD---LLPEPALVFRYIDP 384
K G+ A V + + K+ T S L + ++++F+ L+ E + + I P
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE--MKEKGISP 627
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
++ N + YL + DA D M++ AP+ +SF L+ A C A +V+
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRS 504
V + + +++++ EL+ AG+ L A + + + R + L Y + +L +
Sbjct: 688 ETAVSICGQKEG-LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 505 GRTPDACTFYDQMKENG 521
A +M + G
Sbjct: 747 DELEVASGILHKMIDRG 763
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/528 (20%), Positives = 200/528 (37%), Gaps = 57/528 (10%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFF----TFDITLFHLSNXXXXXXXXXX 199
PN+ NL + ++G L A T+F+ I+ + +++I L L
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
K+M P+ +++ L++ K+ L +A ++GLM G+ + L+H +C
Sbjct: 349 L-KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+G +D A LLQ M+ C PN T L+ + + R+++A L M G+ D V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
N+++D +G A+ + + + S++ ++ + +L+
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV----------DDSLIE 517
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
PDL+ + LL+ L KAG ++A + M+ PD ++ + + C GKI
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A +V + + +I+ L + + + + + Y I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKD------------------ 541
L + DA D+M + + PN + ++ F K D
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Query: 542 ----------------LQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLA 585
L K ++L+ ++ EL + +L C+ D S +L
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILH 757
Query: 586 EM--REMGLLPA------KALHALSSDKYAESLEEKYEHCAEVNTELN 625
+M R G PA L + + K A S +K A V N
Sbjct: 758 KMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/525 (19%), Positives = 212/525 (40%), Gaps = 38/525 (7%)
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
C + +F LL+R L + + + +M G PN F + + + + G
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 165 ALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
L + ++ PN ++ + K M P+ TF+S +
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK-MREEGLVPDIVTFNSRI 259
Query: 221 NAFFKMDALLEAYQLLGLMVV---LGIQFSVNV-WTILIHKHCQLGILDVANKLLQNMLH 276
+A K +L+A ++ M + LG+ ++ + +++ C++G+L+ A L +++
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
++ +Y ++ + + +A + M G P + +N+L+D K G D
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALVFRYIDPDLVFCNAL 392
A + + + + PD T L C D LL E ++ P+ CN L
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE--MMRNNCLPNAYTCNIL 437
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG------ 446
L L K G S+A E M E G+ D + +++ LC +G++ +A+++ +G
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 447 -----------GVMSSQET------DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
G++ D ++ ++ L KAG++ A +F + + K
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQML 549
D+VAY + I + G+ A M++ G + T N ++ + + +++ ++
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 550 KEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
EM I + + + C + +NLL EM + + P
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 138/327 (42%), Gaps = 20/327 (6%)
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
MV+ GI + +LI C +D A +L M GC PN T+ L++ Y ++
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
L N M S G P+ V++N ++ + GR+ D+ + + ++ + PD T S
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 359 WLSMICQ-------SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
+S +C+ SR+F + E P+ + N +L K G DA ++
Sbjct: 258 RISALCKEGKVLDASRIFSDM-ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI------HTVIIVE 465
+ E S+ + L L GK EA V + Q TD I + +++
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK------QMTDKGIGPSIYSYNILMDG 370
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
L K G A T+ D V Y + G+ A + +M N PN
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEM 552
A+TCN++L + +K + + ++L++M
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKM 457
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 213/540 (39%), Gaps = 61/540 (11%)
Query: 101 ESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYH----------QMQSYGFVPNTFARN 150
ES G L P + RIL RA MH + ++ ++ S V + FA++
Sbjct: 33 ESHGISLDATPT----IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKS 88
Query: 151 LFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYY 210
+D F L + F + P+ + +++ L K M+
Sbjct: 89 NHIDKAFP--QFQLVRSRFPE-NKPSVYLYNL-LLESCIKERRVEFVSWLYKDMVLCGIA 144
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P TF+ L+ A + A +L M G + + + IL+ +C+ G+ D +L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M G PN V Y T++ ++ R D+ + MR G PD+V +N I K
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 331 AGRHQDALGVFRSLSKQNI----QPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI--DP 384
G+ DA +F + +P+ T L C+ LL + +F I +
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK---VGLLEDAKTLFESIREND 321
Query: 385 DLVFC---NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
DL N L LV+ G +A M + G P YS+ +L+ LC G + +A
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 442 KVYRGGVMSSQET--DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
+ G+M DA + ++ GK + AA Q ++R L N AY I
Sbjct: 382 TIV--GLMKRNGVCPDAVTYGCLLHGYCSVGK-VDAAKSLLQEMMRNNCLPN-AYTCNIL 437
Query: 500 --ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM----- 552
+L + GR +A +M E G + TCN+++ +L K +++K M
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 553 --IG----SRIELSDRNFLN------------LCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+G S I L D + + L N C++ + NL AEM L P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 172/427 (40%), Gaps = 53/427 (12%)
Query: 111 PNSFL--LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
PN++ +LL LW+ G + + +M G+ +T N+ +D G L A+ +
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
+ ++ L +L N ++ + P+ T+ +LLN K
Sbjct: 489 VKGMRVHG----SAALGNLGNSYIGLVD-----DSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
EA L M+ +Q + I IH C+ G + A ++L++M GC ++ TY +
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LI N++ + L + M+ G +P++ +N I + + +DA + + ++N
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEF 408
I P+ ++ + C+ FD+ E VF A+ K G
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQE------------VFETAVSICGQKEG-------L 700
Query: 409 YDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIK 468
Y LM + L AAG++ +A ++ + E ++ ++ L K
Sbjct: 701 YSLM---------------FNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Query: 469 AGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKE--------N 520
+ +A+ + + + R Y D A I L + G +A +F D+M E N
Sbjct: 746 KDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
Query: 521 GLKPNAH 527
+ PNA
Sbjct: 806 KVDPNAR 812
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G + + +T ++ + NKLL M+ GC PN VTY LI +Y +N + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
N+FN M+ AG PD V + LID H+KAG A+ +++ + + PD +T +
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS----- 473
Query: 363 ICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+++ L KAGH A + + M++ G P+
Sbjct: 474 ----------------------------VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
++ +++ A A+K+YR + E D +++++ L G A VF +
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
+ + D Y + + ++G A +Y M GL+PN TCN +L TF + +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 543 QKVNQMLKEM--IGSRIELSDRNFLNLCNFPCRS 574
+ ++L+ M +G R L L C RS
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+R PN T++ L++++ + + L EA + M G + + LI H + G
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD+A + Q M G SP+ TY+ +I ++ + A LF M G TP+LV +N+
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
++D H+KA +Q+AL ++R + +PD T + + ++ L E VF +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQ 566
Query: 384 -----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
PD L+ KAG+ A ++Y M+ G P+ + LLS KI
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 439 EAVKV 443
EA ++
Sbjct: 627 EAYEL 631
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 148/381 (38%), Gaps = 70/381 (18%)
Query: 57 ALSCFFW-SSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
AL F+W Q H T MV LGR ++ + +L ++ GC N ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGR-AKQFGAINKLLDEMVRDGC--QPNTVTYN 403
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
L+ RA ++QMQ G P+ +D H + G L +A+ ++Q++Q
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
P+ T+ ++N K L A++L
Sbjct: 464 GL--------------------------------SPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
MV G ++ + I++ H + A KL ++M + G P+ VTY+ +++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ +A +F M+ PD ++ +L+D KAG + A ++
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ------------- 598
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
A++ + P++ CN+LLS ++ ++A E M+ L
Sbjct: 599 --------------------AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 416 GFAPDKYSFAVLLSALCAAGK 436
G P ++ +LLS C G+
Sbjct: 639 GLRPSLQTYTLLLSC-CTDGR 658
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 13/273 (4%)
Query: 73 SVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMF 130
+VT + ++ GR ++ + + Q++ GC P+ ++ L+ I +AG +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMN-VFNQMQEAGC----KPDRVTYCTLIDIHAKAGFLDIA 453
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF----QQIQPPNFFTFDITLFH 186
Y +MQ+ G P+TF ++ ++ + G+L A +F Q PN T++I +
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI-MMD 512
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
L + M + P+ T+ ++ L EA + M
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
V+ +L+ + G ++ A + Q MLH G PNV T +L+ ++ N++ +A L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
+M + G P L + +L+ C + GR + +G
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTD-GRSKLDMG 664
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 84 GRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
G L HK + ++ GC T N ++ +++ + +A + + Y MQ+ GF
Sbjct: 483 GHLPAAHK----LFCEMVDQGC--TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDIT---LFHLSNXXXXXXXXXXX 200
P+ ++ M+ G L A VF ++Q N+ + L L
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
+ ML PN T +SLL+ F +++ + EAY+LL M+ LG++ S+ +T+L+ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL-SCCT 655
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD-ASNLFNHMRSAGHTPDLV 319
G + ++ + P + + A + V + A+N + M S
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 715
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
L + ++D K+G+ ++A V+ +++N+ PD
Sbjct: 716 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPD 748
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G + + +T ++ + NKLL M+ GC PN VTY LI +Y +N + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
N+FN M+ AG PD V + LID H+KAG A+ +++ + + PD +T +
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS----- 473
Query: 363 ICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+++ L KAGH A + + M++ G P+
Sbjct: 474 ----------------------------VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
++ +++ A A+K+YR + E D +++++ L G A VF +
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
+ + D Y + + ++G A +Y M GL+PN TCN +L TF + +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 543 QKVNQMLKEM--IGSRIELSDRNFLNLCNFPCRS 574
+ ++L+ M +G R L L C RS
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+R PN T++ L++++ + + L EA + M G + + LI H + G
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD+A + Q M G SP+ TY+ +I ++ + A LF M G TP+LV +N+
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
++D H+KA +Q+AL ++R + +PD T + + ++ L E VF +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQ 566
Query: 384 -----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
PD L+ KAG+ A ++Y M+ G P+ + LLS KI
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 439 EAVKV 443
EA ++
Sbjct: 627 EAYEL 631
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 148/381 (38%), Gaps = 70/381 (18%)
Query: 57 ALSCFFW-SSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
AL F+W Q H T MV LGR ++ + +L ++ GC N ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGR-AKQFGAINKLLDEMVRDGC--QPNTVTYN 403
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
L+ RA ++QMQ G P+ +D H + G L +A+ ++Q++Q
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
P+ T+ ++N K L A++L
Sbjct: 464 GL--------------------------------SPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
MV G ++ + I++ H + A KL ++M + G P+ VTY+ +++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ +A +F M+ PD ++ +L+D KAG + A ++
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ------------- 598
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
A++ + P++ CN+LLS ++ ++A E M+ L
Sbjct: 599 --------------------AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 416 GFAPDKYSFAVLLSALCAAGK 436
G P ++ +LLS C G+
Sbjct: 639 GLRPSLQTYTLLLSC-CTDGR 658
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 13/273 (4%)
Query: 73 SVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMF 130
+VT + ++ GR ++ + + Q++ GC P+ ++ L+ I +AG +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMN-VFNQMQEAGC----KPDRVTYCTLIDIHAKAGFLDIA 453
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF----QQIQPPNFFTFDITLFH 186
Y +MQ+ G P+TF ++ ++ + G+L A +F Q PN T++I +
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI-MMD 512
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
L + M + P+ T+ ++ L EA + M
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
V+ +L+ + G ++ A + Q MLH G PNV T +L+ ++ N++ +A L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
+M + G P L + +L+ C + GR + +G
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTD-GRSKLDMG 664
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 84 GRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
G L HK + ++ GC T N ++ +++ + +A + + Y MQ+ GF
Sbjct: 483 GHLPAAHK----LFCEMVDQGC--TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDIT---LFHLSNXXXXXXXXXXX 200
P+ ++ M+ G L A VF ++Q N+ + L L
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
+ ML PN T +SLL+ F +++ + EAY+LL M+ LG++ S+ +T+L+ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL-SCCT 655
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD-ASNLFNHMRSAGHTPDLV 319
G + ++ + P + + A + V + A+N + M S
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 715
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
L + ++D K+G+ ++A V+ +++N+ PD
Sbjct: 716 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPD 748
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G + + +T ++ + NKLL M+ GC PN VTY LI +Y +N + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
N+FN M+ AG PD V + LID H+KAG A+ +++ + + PD +T +
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS----- 473
Query: 363 ICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+++ L KAGH A + + M++ G P+
Sbjct: 474 ----------------------------VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
++ +++ A A+K+YR + E D +++++ L G A VF +
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
+ + D Y + + ++G A +Y M GL+PN TCN +L TF + +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 543 QKVNQMLKEM--IGSRIELSDRNFLNLCNFPCRS 574
+ ++L+ M +G R L L C RS
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+R PN T++ L++++ + + L EA + M G + + LI H + G
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD+A + Q M G SP+ TY+ +I ++ + A LF M G TP+LV +N+
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
++D H+KA +Q+AL ++R + +PD T + + ++ L E VF +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQ 566
Query: 384 -----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
PD L+ KAG+ A ++Y M+ G P+ + LLS KI
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 439 EA 440
EA
Sbjct: 627 EA 628
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 148/381 (38%), Gaps = 70/381 (18%)
Query: 57 ALSCFFW-SSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
AL F+W Q H T MV LGR ++ + +L ++ GC N ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGR-AKQFGAINKLLDEMVRDGC--QPNTVTYN 403
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
L+ RA ++QMQ G P+ +D H + G L +A+ ++Q++Q
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
P+ T+ ++N K L A++L
Sbjct: 464 GL--------------------------------SPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
MV G ++ + I++ H + A KL ++M + G P+ VTY+ +++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ +A +F M+ PD ++ +L+D KAG + A ++
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ------------- 598
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
A++ + P++ CN+LLS ++ ++A E M+ L
Sbjct: 599 --------------------AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Query: 416 GFAPDKYSFAVLLSALCAAGK 436
G P ++ +LLS C G+
Sbjct: 639 GLRPSLQTYTLLLSC-CTDGR 658
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 13/273 (4%)
Query: 73 SVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMF 130
+VT + ++ GR ++ + + Q++ GC P+ ++ L+ I +AG +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMN-VFNQMQEAGC----KPDRVTYCTLIDIHAKAGFLDIA 453
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF----QQIQPPNFFTFDITLFH 186
Y +MQ+ G P+TF ++ ++ + G+L A +F Q PN T++I +
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI-MMD 512
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
L + M + P+ T+ ++ L EA + M
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
V+ +L+ + G ++ A + Q MLH G PNV T +L+ ++ N++ +A L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
+M + G P L + +L+ C + GR + +G
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTD-GRSKLDMG 664
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 84 GRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
G L HK + ++ GC T N ++ +++ + +A + + Y MQ+ GF
Sbjct: 483 GHLPAAHK----LFCEMVDQGC--TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDIT---LFHLSNXXXXXXXXXXX 200
P+ ++ M+ G L A VF ++Q N+ + L L
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
+ ML PN T +SLL+ F +++ + EAY+LL M+ LG++ S+ +T+L+ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL-SCCT 655
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD-ASNLFNHMRSAGHTPDLV 319
G + ++ + P + + A + V + A+N + M S
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 715
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
L + ++D K+G+ ++A V+ +++N+ PD
Sbjct: 716 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPD 748
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/525 (21%), Positives = 210/525 (40%), Gaps = 72/525 (13%)
Query: 108 TKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
T + +SF ++ + + G H M +G P+ + N +D H R G++ A
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 168 VFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
V + ++ + F P+ +F+SL N F KM
Sbjct: 113 VLESLRASHGFICK-----------------------------PDIVSFNSLFNGFSKMK 143
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
L E + +G+M+ +V ++ I C+ G L +A K +M SPNVVT+T
Sbjct: 144 MLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
LI Y ++ + A +L+ MR + ++V + LID K G Q A ++ + +
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 348 NIQPDPYTLTSWLS-----------------MICQSRMFDL---------------LPEP 375
++P+ T+ + M+ Q D+ L E
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 376 ALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
+ ++ PD+V +++ K+G A Y +IE GF PD + + ++
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
+ G+++EA+ VY ++ + ++TV+I L K G ++ +F + D
Sbjct: 383 IAKNGQLHEAI-VY----FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
Y I L + G DA +M + GL + +++ + + + Q+
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD 497
Query: 551 EMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA 595
EM+ S I F L + + S+LL +M+ GL+ A
Sbjct: 498 EMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA 542
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 157/377 (41%), Gaps = 38/377 (10%)
Query: 259 CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH---- 314
C+LG + A ++ +M GC P+V++Y +LI + + + AS + +R A H
Sbjct: 67 CKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR-ASHGFIC 125
Query: 315 TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE 374
PD+V +N L + SK + D + V+ + + P+ T ++W+ C+S L +
Sbjct: 126 KPDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 375 P--ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
++ + P++V L+ KAG A Y M + + + ++ L+ C
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
G++ A ++Y V E ++ ++T II + G A + + + LD
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
AY V I L +G+ +A + M+++ L P+ M+ ++K ++ M ++
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 553 IGSRIE------------------------------LSDRNFLNLCNFPCRSDAYYSTSN 582
I E +D + L + C+ +
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVER 424
Query: 583 LLAEMREMGLLPAKALH 599
L +++ E GL+P K ++
Sbjct: 425 LFSKISEAGLVPDKFMY 441
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 149/356 (41%), Gaps = 35/356 (9%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
LI+ +C GIL + K L ++ G +P+ ++ +++ + +V A ++ + M G
Sbjct: 31 LINSNC--GILSL--KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFG 86
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP 373
PD++ +N LID H + G + A V SL + IC+
Sbjct: 87 CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH------------GFICK-------- 126
Query: 374 EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
PD+V N+L + K + + +M++ +P+ +++ + C
Sbjct: 127 ----------PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCK 175
Query: 434 AGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
+G++ A+K + + + T +I KAG +A +++K+ + L+ V
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
Y I + G A Y +M E+ ++PN+ ++ F++ D + L +M+
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 554 GSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAES 609
+ L + + + C + + ++ +M + L+P + + Y +S
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 105/277 (37%), Gaps = 6/277 (2%)
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR--MFDLLPEPALVFRYIDPDLVFCNAL 392
++AL L K + PDP+T + + S + L LV R P N++
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
+S++ K G A + M G PD S+ L+ C G I A V + +S
Sbjct: 63 VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLE-SLRASH 121
Query: 453 ETDARIHTVIIVELIKA---GKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ V L K L V+ +++ + V Y+ I +SG
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
A + MK + L PN T ++ + K DL+ + KEM R+ L+ + L +
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 570 FPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKY 606
C+ + + M E + P ++ D +
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 202/509 (39%), Gaps = 48/509 (9%)
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
C N +F L+ + G F + M+ G P+ A + +D +F+ G L +
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 165 ALTVFQQIQPPNFFTFDITLF----HLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
+F Q D+ +F + KRML PN T+ L+
Sbjct: 340 GHKLFSQALHKGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
+ + EA+ + G ++ G++ S+ ++ LI C+ G L L ++M+ G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P+VV Y L+ + + A M ++V++N LID + R +AL V
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 341 FRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID--------PDLVFCNAL 392
FR + I+PD T T+ + + F +P + + D D+ CN +
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 578
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
+ L K DA++F++ +IE PD ++ ++ C+ ++ EA +++
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-------- 630
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
EL+K V + + V + I L ++ A
Sbjct: 631 ------------ELLK---------------VTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 513 FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPC 572
+ M E G KPNA T ++ F K D++ ++ +EM I S ++ + + C
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 573 RSDAYYSTSNLLAEMREMGLLPAKALHAL 601
+ +N+ + + LLP +A+
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAI 752
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 181/410 (44%), Gaps = 10/410 (2%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN TF +L+N F K + A+ L +M GI+ + ++ LI + + G+L + +KL
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
LH G +VV +++ I Y++S + AS ++ M G +P++V + +LI +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS---RMFDLLPEPALVFRYIDPDLV 387
GR +A G++ + K+ ++P T +S + C+ R L E + Y PD+V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY-PPDVV 462
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR-G 446
L+ L K G A F M+ + F L+ C + EA+KV+R
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 447 GVMSSQETDARIHTVIIVELIKAG-----KYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
G+ + A TV+ V +++ K + +F K D V I L
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
+ R DA F++ + E ++P+ T N M+ + + L + ++ + + + +
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
L + C+++ + + M E G P + D +++S++
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T+++++ + + L EA ++ L+ V + TILIH C+ +D A ++
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
M G PN VTY L+ + +S + + LF M+ G +P +V ++++ID K
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----IDPD 385
GR +A +F + PD + C+ L E AL++ + + PD
Sbjct: 725 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK---VGRLVEAALLYEHMLRNGVKPD 781
Query: 386 LVFCNALLSY 395
+ AL Y
Sbjct: 782 DLLQRALSEY 791
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 4/271 (1%)
Query: 341 FRSLSKQNIQPDPYTLTSWL--SMICQSRMFDLLPEPALVF-RYIDPDLVFCNALLSYLV 397
F L + I+P + ++ ++ C+ + L LV R +V CN +L L
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
A+ L+++ G AP+ +F L++ C G++ A +++ E D
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
++ +I KAG M +F QA+ + LD V ++ I ++SG A Y +M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAY 577
G+ PN T +++ ++ + + M +++ +E S + +L + C+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 578 YSTSNLLAEMREMGLLPAKALHALSSDKYAE 608
S L +M +MG P ++ + D ++
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 159/381 (41%), Gaps = 47/381 (12%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G +V V+ IL++K C+ G + A K+ + P VV++ TLI Y + + +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
L + M + PD+ ++ LI+ K + A G+F + K+ + P+ T+ +
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 363 ICQSRMFDLLPEP--ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
++ DL+ E ++ + + PD+V N L++ K G A D MI G PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
K ++ L+ C G + A+++ + E+ + G
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRK-------------------EMDQNG---------- 445
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
LD V ++ +C + + GR DA +M G+KP+ T MM+ F K+
Sbjct: 446 ------IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 541 DLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKAL-- 598
D Q ++LKEM S + L N C+ + LL M +G++P
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 599 --------HALSSDKYAESLE 611
HA SS +Y + E
Sbjct: 560 TLLEGHHRHANSSKRYIQKPE 580
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 13/316 (4%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSN 189
Y ++ GF N + N+ M+ + GN+ A VF +I P +F+ TL +
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN-TLINGYC 286
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
+M + P+ T+ +L+NA K + + A+ L M G+ +
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
++T LIH H + G +D+ + Q ML G P++V Y TL+ + ++ + A N+ + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRM 368
G PD + + LID + G + AL + + + + I+ D ++ + +C + R+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 369 FDLLPEPALVFRY-IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL---GFAPDKYSF 424
D + R I PD V ++ K G DA + L+ E+ G P ++
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 425 AVLLSALCAAGKIYEA 440
VLL+ LC G++ A
Sbjct: 524 NVLLNGLCKLGQMKNA 539
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 19/246 (7%)
Query: 125 GMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ-----IQPPNFFT 179
G H +F +M G +PN + H R G + L +Q+ +QP
Sbjct: 328 GAHGLF----DEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP----- 378
Query: 180 FDITLFH-LSN---XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
DI L++ L N M+R P+ T+ +L++ F + + A ++
Sbjct: 379 -DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
M GI+ ++ L+ C+ G + A + L+ ML G P+ VTYT ++ A+ +
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
L M+S GH P +V +NVL++ K G+ ++A + ++ + PD T
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 356 LTSWLS 361
+ L
Sbjct: 558 YNTLLE 563
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 5/228 (2%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
L N F L+ R G + ++Y +M S G P+ N ++ + G+L A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 167 TV----FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
+ ++ P+ T+ TL K M + + F +L+
Sbjct: 401 NIVDGMIRRGLRPDKITY-TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
K +++A + L M+ GI+ +T+++ C+ G KLL+ M G P+
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
VVTY L+ + ++ +A L + M + G PD + +N L++ H +
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHR 567
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 119/302 (39%), Gaps = 10/302 (3%)
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----ID 383
S+ G++ A VF SL + + P L L MI + + +P+ FR D
Sbjct: 146 SRKGKNS-ASSVFISLVEMRVTPMCGFLVDAL-MITYTDL-GFIPDAIQCFRLSRKHRFD 202
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
+ C LL ++K FY +++ GF + Y F +L++ C G I +A KV
Sbjct: 203 VPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKV 262
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
+ S + +I K G + Q + D Y+ I AL +
Sbjct: 263 FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
+ A +D+M + GL PN ++ + ++ + + ++M+ ++
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 564 FLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAEVNTE 623
+ L N C++ + N++ M GL P K + D + + E E+ E
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD--VETALEIRKE 440
Query: 624 LN 625
++
Sbjct: 441 MD 442
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 137 MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXX 196
M G P+ +D R G++ AL + +++ N D F
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ-NGIELDRVGFSALVCGMCKEG 464
Query: 197 XXXXXKR----MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
+R MLR P+ T+ +++AF K ++LL M G SV +
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
+L++ C+LG + A+ LL ML+ G P+ +TY TL++ + +R ++S +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEI 581
Query: 313 GHTPDLVLWNVLIDCHSKAGR 333
G DL + +++ +A +
Sbjct: 582 GIVADLASYKSIVNELDRASK 602
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 177/421 (42%), Gaps = 44/421 (10%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
SF +L++ AG F ++ +GF PN +D + G + A +F +
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE- 223
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
M ++ N T+ L+N FK +
Sbjct: 224 -------------------------------MGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+++ M G+ ++ + ++++ C+ G A ++ M G S N+VTY TLI
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
++ +A+ + + M+S G P+L+ +N LID G+ AL + R L + + P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 353 PYTLTSWLSMICQ-------SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
T +S C+ ++M + E R I P V L+ ++ + A
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEE-----RGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
+ M ELG PD ++++VL+ C G++ EA ++++ V + E + I+ +I+
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
K G A + K+ ++ + +Y I L + ++ +A ++M ++G+ P+
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Query: 526 A 526
Sbjct: 548 T 548
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 12/354 (3%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+ ILI C+ G ++ + LL + G SPNVV YTTLI + + A +LF M
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS---- 366
G + + VLI+ K G + ++ + + + P+ YT ++ +C+
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 367 ---RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
++FD + E R + ++V N L+ L + ++A + D M G P+ +
Sbjct: 286 DAFQVFDEMRE-----RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
+ L+ C GK+ +A+ + R + +++ + G AA + K+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 484 VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ 543
R V Y + I RS A M+E GL P+ HT ++++ F + +
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 544 KVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKA 597
+ +++ K M+ E ++ + + C+ + Y LL EM E L P A
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 11/321 (3%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
L N ++ +L+ L++ G+ F+ Y +MQ G PN + N M+ + G A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 167 TVFQQIQPP----NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
VF +++ N T++ + L +M PN T+++L++
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCR-EMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
F + L +A L + G+ S+ + IL+ C+ G A K+++ M G P+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
VTYT LI + S+ + A L M G PD+ ++VLI G+ +A +F+
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 343 SLSKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
S+ ++N +P+ + + C+ R LL E + + + P++ ++ L K
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE--MEEKELAPNVASYRYMIEVLCK 525
Query: 399 AGHPSDAAEFYDLMIELGFAP 419
+A + MI+ G P
Sbjct: 526 ERKSKEAERLVEKMIDSGIDP 546
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
+V ++ LIK E+ + + +L + G +P++V++ LID K G + A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCNALLS 394
+ K + + T T ++ + ++ M++ + E + P+L N +++
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-----PNLYTYNCVMN 276
Query: 395 YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
L K G DA + +D M E G + + ++ L+ LC K+ EA KV
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
+ + +I GK A ++ + R V Y + + R G T A
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 515 DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
+M+E G+KP+ T +++ TF + +++K Q+
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 9/236 (3%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXX 191
QM+S G PN N +D +G L AL++ + ++ P+ T++I +
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
K M P+ T+ L++ F + D + +A QL M LG+ V+ +
Sbjct: 388 DTSGAAKMV-KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
++LIH C G ++ A++L ++M+ C PN V Y T+I Y + A L M
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
P++ + +I+ K + ++A + + I P TS LS+I +++
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS----TSILSLISRAK 558
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 152/348 (43%), Gaps = 15/348 (4%)
Query: 137 MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNF----FTFDITLFHLSNXXX 192
M +GFVPN N ++ + +L+ AL VF ++ T++ + LSN
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 193 XXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
+ M++ PN F +L++ F K LLEA L M+ + +V +
Sbjct: 235 WTDAARLL-RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
LI+ C G L A + M+ GC P+VVTY TLI + +S RV D LF M
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD-- 370
G D +N LI + +AG+ A VF + + PD T L +C + +
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L+ L +D D++ N ++ L + +A + + G PD ++ ++S
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 431 LCAAGKIYEAVKVYR----GGVMSSQ----ETDARIHTVIIVELIKAG 470
LC G EA K+ R G M S+ ET +T + ELIKA
Sbjct: 474 LCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAA 521
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 159/360 (44%), Gaps = 37/360 (10%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ + P+ T SLLN F + + EA L+ M G +V ++ +I+ C+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
L+ A ++ M G + VTY TLI S R TDA+ L M P+++ +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-------QSRMFDLLPE- 374
LID K G +A +++ + ++++ P+ +T S ++ C MFDL+
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 375 ---PALVF------------RYIDPDLVFC--------------NALLSYLVKAGHPSDA 405
P +V R D +FC N L+ +AG + A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
+ ++ M++ G +PD ++ +LL LC GKI +A+ + S + D + +II
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
L + K A +F+ + D +AY I L R G +A +MKE+G P+
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 196/450 (43%), Gaps = 48/450 (10%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
ML+ P+ F +L KM+ L M LGI + +TILIH C+
Sbjct: 70 MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSR 129
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A LL M+ G P++VT +L+ + + NR +A +L + M G P++V++N
Sbjct: 130 LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFD---LLPEPALVF 379
+I+ K +AL VF + K+ I+ D T + +S + S R D LL + +V
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD--MVK 247
Query: 380 RYIDPDLVFCNALLSYLVKAGH-----------------PS------------------D 404
R IDP+++F AL+ VK G+ P+ D
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
A +DLM+ G PD ++ L++ C + ++ + +K++ DA + +I
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 465 ELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP 524
+AGK +A VF + V D V Y + + L +G+ A + ++++ +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 525 NAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLL 584
+ T N+++ + L++ + + + ++ ++ + + CR L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 585 AEMREMGLLPAKALHALSSDKYAESLEEKY 614
M+E G +P++ + Y E+L + Y
Sbjct: 488 RRMKEDGFMPSERI-------YDETLRDHY 510
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 35/312 (11%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G + + +T ++ + NKLL M+ GC PN VTY LI +Y +N + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
N+FN M+ AG PD V + LID H+KAG A+ +++ + + + PD +T +
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS----- 468
Query: 363 ICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+++ L KAGH A + M+ G P+
Sbjct: 469 ----------------------------VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 423 SFAVLLSALCAAGKIYE-AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ 481
+F +++ AL A + YE A+K+YR + + D +++++ L G A VF +
Sbjct: 501 TFNIMI-ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 482 AVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKD 541
+ + D Y + + ++G A +Y M + GL+PN TCN +L TF +
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 542 LQKVNQMLKEMI 553
+ + +L+ M+
Sbjct: 620 MSEAYNLLQSML 631
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 8/243 (3%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
M+R PN T++ L++++ + + L EA + M G + + LI H + G
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
LD+A + Q M G SP+ TY+ +I ++ + A LF M G TP+LV +N
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
++I H+KA ++ AL ++R + QPD T + + ++ L E VF +
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC---GFLEEAEGVFAEM 560
Query: 383 D-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
PD L+ KAG+ A ++Y M++ G P+ + LLS ++
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 438 YEA 440
EA
Sbjct: 621 SEA 623
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 145/379 (38%), Gaps = 69/379 (18%)
Query: 57 ALSCFFW-SSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
AL F+W Q H T MV LGR ++ + +L ++ GC N ++
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGR-AKQFGEINKLLDEMVRDGC--KPNTVTYN 398
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
L+ RA ++QMQ G P+ +D H + G L +A+ ++Q
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ----- 453
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
RM P+ T+ ++N K L A++L
Sbjct: 454 ---------------------------RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRL 486
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
MV G ++ + I+I H + + A KL ++M + G P+ VTY+ +++
Sbjct: 487 FCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGH 546
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ +A +F M+ PD ++ +L+D KAG A ++++ + ++P+ T
Sbjct: 547 CGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPT 606
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
CN+LLS ++ S+A M+ L
Sbjct: 607 ---------------------------------CNSLLSTFLRVHRMSEAYNLLQSMLAL 633
Query: 416 GFAPDKYSFAVLLSALCAA 434
G P ++ +LLS A
Sbjct: 634 GLHPSLQTYTLLLSCCTDA 652
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 5/256 (1%)
Query: 101 ESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIG 160
E +G T N +F +++ + +A + + Y MQ+ GF P+ ++ M+ G
Sbjct: 489 EMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Query: 161 NLHLALTVFQQIQPPNFFTFDIT---LFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFH 217
L A VF ++Q N+ + L L + ML+ PN T +
Sbjct: 549 FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCN 608
Query: 218 SLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT 277
SLL+ F ++ + EAY LL M+ LG+ S+ +T+L+ C + ++
Sbjct: 609 SLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL-SCCTDARSNFDMGFCGQLMAV 667
Query: 278 GCSPNVVTYTTLIKAYMESNRVTD-ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
P + + A + +V D SN + M S L + ++D K+G ++
Sbjct: 668 SGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEE 727
Query: 337 ALGVFRSLSKQNIQPD 352
A V+ + +N+ PD
Sbjct: 728 AGSVWEVAAGKNVYPD 743
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 224/522 (42%), Gaps = 40/522 (7%)
Query: 52 SSDLIALSCFFWSS--QRRRDHQS---VTVDHMVPVLGRLTRRHKTLQAILLQLESIGCI 106
S ++AL F+W+ ++ R VT D ++ G L + H+ ++ +L IG +
Sbjct: 105 SGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLAN-GNLQKAHEVMRCMLRNFSEIGRL 163
Query: 107 --------------LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLF 152
LT + + +L I G+ + +M G VP++ + L
Sbjct: 164 NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 223
Query: 153 MDAHFRIGNLHLA---LT-VFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH 208
+ FR G + A LT + Q+ P+ T + L L ++M+ +
Sbjct: 224 VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF-RKMIDLG 282
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
+ PN F SL++ K ++ +A+++L MV G + +V T LI C+ G + A
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 269 KLLQNMLHTGC-SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
+L ++ + PNV TYT++I Y + +++ A LF+ M+ G P++ + LI+
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALVFRYID 383
H KAG A + + + P+ YT + + +C+ ++LL + ++
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC--GLE 460
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
D V L+ K + A F+ M + GF D +L++A C K+ E+ ++
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 444 YRG----GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
++ G++ ++ET +T +I K G +A F D+ Y I
Sbjct: 521 FQLVVSLGLIPTKET----YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKD 541
L + +AC Y+ M + GL P T + + + K D
Sbjct: 577 GLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 145/370 (39%), Gaps = 38/370 (10%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P++ T + +L ++ + A + M V G+ + + +++ + G + A++
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 239
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M+ G P+ T T ++ A E+ V A F M G P+L+ + LID K
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMF-------------- 369
G + A + + + +P+ YT T+ + +C+ R+F
Sbjct: 300 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 359
Query: 370 ------------DLLPEPALVFRYIDPDLVFCN-----ALLSYLVKAGHPSDAAEFYDLM 412
D L ++F + +F N L++ KAG A E +LM
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 413 IELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKY 472
+ GF P+ Y++ + +LC + EA ++ E D +T++I E K
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
A F + + D + I A R + ++ + + GL P T M
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Query: 533 LFTFYKEKDL 542
+ + KE D+
Sbjct: 540 ISCYCKEGDI 549
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 7/285 (2%)
Query: 68 RRDHQSVTVDHMVPVLGRLTRRHKTLQAILL--QLESIGCILTKNPNSFLLLLRILWRAG 125
R D V ++G + K +A +L +++ G L N N++ L+ +AG
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG--LFPNVNTYTTLINGHCKAG 407
Query: 126 MHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDIT-- 183
++ + M GF+PN + N +D+ + A + + +T
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 184 -LFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVL 242
L RM + + + + L+ AF + + E+ +L L+V L
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G+ + +T +I +C+ G +D+A K NM GC P+ TY +LI + + V +A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
L+ M G +P V L + K +A+ + L K+
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 117/312 (37%), Gaps = 16/312 (5%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSN 189
+ +M+ G PN ++ H + G+ A + + PN +T++ + L
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
K + T+ L+ K + + +A M G + +
Sbjct: 441 KSRAPEAYELLNK-AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+ ILI C+ + + +L Q ++ G P TYT++I Y + + A F++M
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ---S 366
+ G PD + LI K +A ++ ++ + + P T + C+ S
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDS 619
Query: 367 RMFDLLPEPALVFRYIDPDLVF--CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+L EP +D L L+ L AA F+ ++E + D+ +
Sbjct: 620 ANAMILLEP------LDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673
Query: 425 AVLLSALCAAGK 436
A +A +GK
Sbjct: 674 AAFTTACSESGK 685
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 1/214 (0%)
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ P + N +L V+ G A +D M G PD S+ +++ GKI EA
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+ G + D T+I+ L + G A F++ + + + + + I L
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
+ G A ++M NG KPN +T ++ K +K ++ +++ S +
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Query: 562 -RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ ++ C+ D L + M+E GL P
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 198/449 (44%), Gaps = 48/449 (10%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ LL R L +AG+H + Q + M+S G PN + + G LH A + Q
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ- 163
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+F++ + +SLLN K+D + +A
Sbjct: 164 ------SFEVEGCCM---------------------------VVNSLLNTLVKLDRVEDA 190
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+L + + ILI C +G + A +LL M GC P++VTY TLI+
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 293 YMESNRVTDASNLFNHMRSAG-HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
+ +SN + AS +F ++S +PD+V + +I + KAG+ ++A + + + I P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAE 407
T + ++ ++L + + I PD+V +L+ + G S
Sbjct: 311 TNVTFNVLVDGY--AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR--IHTVIIVE 465
++ M G P+ +++++L++ALC ++ +A ++ G ++S++ + ++ +I
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELL--GQLASKDIIPQPFMYNPVIDG 426
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
KAGK A + ++ +K D + + + I GR +A + + +M G P+
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 526 AHTCNMMLFTFYK---EKDLQKVNQMLKE 551
T + +L K K+ +NQ+ ++
Sbjct: 487 KITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 9/338 (2%)
Query: 74 VTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQA 133
+ V+ ++ L +L R ++ L C TK +F +L+R L G +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK---TFNILIRGLCGVGKAEKALEL 228
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFH--LSN-- 189
M +G P+ N + + L+ A +F+ ++ + + D+ + +S
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
MLR+ YP TF+ L++ + K +L A ++ G M+ G V
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+T LI +C++G + +L + M G PN TY+ LI A NR+ A L +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRM 368
S P ++N +ID KAG+ +A + + K+ +PD T T + C + RM
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 369 FDLLPE-PALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
F+ + +V PD + ++LLS L+KAG +A
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 154/395 (38%), Gaps = 44/395 (11%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN------------------- 282
L I+ S + +L C+ G+ D+A ++ + M G SPN
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 283 --------------VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ +L+ ++ +RV DA LF+ D +N+LI
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI------ 382
G+ + AL + +S +PD T + + C+S + E +F+ +
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE---MFKDVKSGSVC 273
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
PD+V +++S KAG +A+ D M+ LG P +F VL+ AG++ A +
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 443 VYRGGVMS-SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+ RG ++S D T +I + G+ ++++ R + Y++ I AL
Sbjct: 334 I-RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
R A Q+ + P N ++ F K + + N +++EM + +
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAK 596
F L C + ++ +M +G P K
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F +L+ +AG + +M S+G P+ +D + R+G + +++++
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 173 QP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
PN FT+ I + L N ++ P ++ +++ F K
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELL-GQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+ EA ++ M + +TILI HC G + A + M+ GCSP+ +T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
L+ +++ +A +L N + G + ++V
Sbjct: 493 LLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
N L L KAG A + ++ M G +P+ L+S+ GK++ A + ++
Sbjct: 107 NLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL----LL 162
Query: 450 SSQETDARIHTV--IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
S E + V ++ L+K + A +F + + + D + + I L G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR-NFLN 566
A M G +P+ T N ++ F K +L K ++M K++ + D + +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
+ + C++ S+LL +M +G+ P + D YA++ E
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 198/449 (44%), Gaps = 48/449 (10%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ LL R L +AG+H + Q + M+S G PN + + G LH A + Q
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ- 163
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+F++ + +SLLN K+D + +A
Sbjct: 164 ------SFEVEGCCM---------------------------VVNSLLNTLVKLDRVEDA 190
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+L + + ILI C +G + A +LL M GC P++VTY TLI+
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 293 YMESNRVTDASNLFNHMRSAG-HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
+ +SN + AS +F ++S +PD+V + +I + KAG+ ++A + + + I P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAE 407
T + ++ ++L + + I PD+V +L+ + G S
Sbjct: 311 TNVTFNVLVDGY--AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFR 368
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR--IHTVIIVE 465
++ M G P+ +++++L++ALC ++ +A ++ G ++S++ + ++ +I
Sbjct: 369 LWEEMNARGMFPNAFTYSILINALCNENRLLKARELL--GQLASKDIIPQPFMYNPVIDG 426
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
KAGK A + ++ +K D + + + I GR +A + + +M G P+
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 526 AHTCNMMLFTFYK---EKDLQKVNQMLKE 551
T + +L K K+ +NQ+ ++
Sbjct: 487 KITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 9/338 (2%)
Query: 74 VTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQA 133
+ V+ ++ L +L R ++ L C TK +F +L+R L G +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK---TFNILIRGLCGVGKAEKALEL 228
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFH--LSN-- 189
M +G P+ N + + L+ A +F+ ++ + + D+ + +S
Sbjct: 229 LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYC 288
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
MLR+ YP TF+ L++ + K +L A ++ G M+ G V
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+T LI +C++G + +L + M G PN TY+ LI A NR+ A L +
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQL 408
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRM 368
S P ++N +ID KAG+ +A + + K+ +PD T T + C + RM
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Query: 369 FDLLPE-PALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
F+ + +V PD + ++LLS L+KAG +A
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 154/395 (38%), Gaps = 44/395 (11%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN------------------- 282
L I+ S + +L C+ G+ D+A ++ + M G SPN
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 283 --------------VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ +L+ ++ +RV DA LF+ D +N+LI
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI------ 382
G+ + AL + +S +PD T + + C+S + E +F+ +
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE---MFKDVKSGSVC 273
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
PD+V +++S KAG +A+ D M+ LG P +F VL+ AG++ A +
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 443 VYRGGVMS-SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+ RG ++S D T +I + G+ ++++ R + Y++ I AL
Sbjct: 334 I-RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
R A Q+ + P N ++ F K + + N +++EM + +
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAK 596
F L C + ++ +M +G P K
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F +L+ +AG + +M S+G P+ +D + R+G + +++++
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 173 QP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
PN FT+ I + L N ++ P ++ +++ F K
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELL-GQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+ EA ++ M + +TILI HC G + A + M+ GCSP+ +T ++
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
L+ +++ +A +L N + G + ++V
Sbjct: 493 LLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
N L L KAG A + ++ M G +P+ L+S+ GK++ A + ++
Sbjct: 107 NLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL----LL 162
Query: 450 SSQETDARIHTV--IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
S E + V ++ L+K + A +F + + + D + + I L G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR-NFLN 566
A M G +P+ T N ++ F K +L K ++M K++ + D + +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
+ + C++ S+LL +M +G+ P + D YA++ E
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 206/497 (41%), Gaps = 40/497 (8%)
Query: 127 HAMFFQAYH---QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDIT 183
H + +AY +M G +P+T + N +D ++GN A + +I N T I
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 184 LFHLSN-------------------------------XXXXXXXXXXXXKRMLRMHYYPN 212
L N + M M YPN
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
T+ +L+++ FK + A L MVV GI + V+T+L+ + G L A K +
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
+L PNVVTYT L+ ++ ++ A + M P++V ++ +I+ + K G
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI--DPDLVFCN 390
++A+ + R + QN+ P+ +T + + + ++ ++ E + R I + + +
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
AL+++L + G + M+ G D+ ++ L+ G A+
Sbjct: 474 ALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQER 533
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
D + V+I ++K GK + A +K + D + + + + + G +
Sbjct: 534 GMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE---LSDRNFLNL 567
+D+MK G+KP+ +CN+++ + +++ +L +M+ I + R FL+
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 568 CNFPCRSDAYYSTSNLL 584
+ R+DA + T L
Sbjct: 653 SSKHKRADAIFKTHETL 669
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 168/382 (43%), Gaps = 13/382 (3%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL-DVANKLLQNM 274
FH+L + + L A + L M G+ +W LIH+ G++ D + + M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
+ G SP+V LI ++ + R++ A +L +R+ + D V +N +I + G
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLS 394
+A + K I PD + + + C ++ + + ALV + +L+ LLS
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFC--KVGNFVRAKALVDEISELNLITHTILLS 235
Query: 395 --YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
Y + A E Y M+ GF PD +F+ +++ LC GK+ E + R S
Sbjct: 236 SYYNLHA-----IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
+ +T ++ L KA Y A ++ Q VVR P+D V Y V + L ++G +A
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 513 FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPC 572
+ + E+ PN T ++ K DL ++ +M+ + + + ++ N
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 573 RSDAYYSTSNLLAEMREMGLLP 594
+ +LL +M + ++P
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVP 432
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 151/343 (44%), Gaps = 9/343 (2%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLL-GLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
P++ ++SL++ F + + L+ M+ G+ V +LIH C++G L A
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
LL+N + S + VTY T+I E +A + M G PD V +N LID
Sbjct: 151 LLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFC 389
K G A + +S+ N+ L+S+ ++ + +V DPD+V
Sbjct: 208 KVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR-----DMVMSGFDPDVVTF 262
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
+++++ L K G + M E+ P+ ++ L+ +L A A+ +Y V+
Sbjct: 263 SSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVV 322
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
D ++TV++ L KAG A FK + + V Y + L ++G
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
A QM E + PN T + M+ + K+ L++ +L++M
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/569 (20%), Positives = 213/569 (37%), Gaps = 47/569 (8%)
Query: 82 VLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYG 141
++ RL + K L+ LL E + N ++ L+ L++A ++ Y QM G
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324
Query: 142 FVPNTFARNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXXXXXXX 197
+ + MD F+ G+L A F+ + Q PN T+ + L
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 198 XXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHK 257
+ ML PN T+ S++N + K L EA LL M + + + +I
Sbjct: 385 FIITQ-MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 258 HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
+ G ++A +L + M G N L+ R+ + L M S G T D
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--- 374
+ + LID K G + AL + ++ + P+ + S+ +I F +
Sbjct: 504 QINYTSLIDVFFKGGDEEAALAWAEEMQERGM---PWDVVSYNVLISGMLKFGKVGADWA 560
Query: 375 -PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
+ + I+PD+ N +++ K G + +D M G P S +++ LC
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 434 AGKIYEAVKV---------------YR------------GGVMSSQET--------DARI 458
GK+ EA+ + YR + + ET ++
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
+ +I L K G AA V R + D V + + A + Y M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYY 578
E G+ PN T N ++ +++V++ L EM + D + L + +
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 579 STSNLLAEMREMGLLPAKALHALSSDKYA 607
+ + EM GL+P + + + ++A
Sbjct: 801 GSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 169/440 (38%), Gaps = 9/440 (2%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFF 178
+ GM +M+ VPN F +D F+ G +A+ + ++++ N +
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
D + HL K M+ + + SL++ FFK A
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLV-KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
M G+ + V + +LI + G + A+ + M G P++ T+ ++ + +
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
L++ M+S G P L+ N+++ + G+ ++A+ + + I P+ T
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 359 WLSMICQSRMFDLL--PEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
+L + + D + L+ I N L++ L K G AA M G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 417 FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAA 476
F PD +F L+ + +A+ Y + + + + II L AG
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 477 TVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTF 536
+ R D+ Y I + G + T Y +M +GL P T N+++ F
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 537 YKEKDLQKVNQMLKEMIGSR 556
+ + ++LKEM G R
Sbjct: 829 ANVGKMLQARELLKEM-GKR 847
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 17/311 (5%)
Query: 133 AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLS 188
AY M+ G P+ N+ M++ + G+ L ++ +++ P+ + +I + L
Sbjct: 560 AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK---MDALLEAYQLLGLMVVLGIQ 245
+ ML M +PN T+ L+ K DA+ + ++ L + GI+
Sbjct: 620 ENGKMEEAIHILNQMML-MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETL---LSYGIK 675
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
S V+ LI C+LG+ A ++ +M G P+ VT+ +L+ Y + V A +
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST 735
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
++ M AG +P++ +N +I S AG ++ + + ++PD +T + +S Q
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS--GQ 793
Query: 366 SRMFDLLPEPALVFRYIDPDLV----FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDK 421
+++ ++ + I LV N L+S G A E M + G +P+
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 422 YSFAVLLSALC 432
++ ++S LC
Sbjct: 854 STYCTMISGLC 864
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 32/342 (9%)
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG-VF 341
V + TL + Y+ R+ A+ + M + G PD LWN LI + G D + ++
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
+ + PD + L + C+ L R I D V N ++S L + G
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLS-FAISLLRNRVISIDTVTYNTVISGLCEHGL 176
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV-------------------- 441
+A +F M+++G PD S+ L+ C G A
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSS 236
Query: 442 --------KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ-AVVRKYPLDNV 492
+ YR VMS + D + II L K GK L + ++ + YP ++V
Sbjct: 237 YYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP-NHV 295
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
Y + +L ++ A Y QM G+ + +++ +K DL++ + K +
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 553 IGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + + L + C++ S ++ +M E ++P
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP 397
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
+ P+ TF+SL++ +F + +A +M+ GI +V + +I G++ +
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
K L M G P+ TY LI + + + ++ M + G P +NVLI
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
+ G+ A + + + K+ + P+ T + +S +C+
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 117/311 (37%), Gaps = 2/311 (0%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M P+ TF+ ++N+ K +L M GI+ S+ I++ C+
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G ++ A +L M+ PN+ TY + + R + S G ++
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL-SMICQSRMFDLLPEPALVFR 380
N LI K G + A V + + PD T S + S + L +++
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 381 Y-IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
I P++ N ++ L AG + ++ M G PD +++ L+S G +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
++ +Y + + V+I E GK L A + K+ R + Y I
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Query: 500 ALLRSGRTPDA 510
L + PD
Sbjct: 862 GLCKLCTHPDV 872
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 199/457 (43%), Gaps = 19/457 (4%)
Query: 113 SFLLLLRILWRAGMHAMFFQAY----HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
SF +L ++ G++ + Y + + PN + NL + A ++ + A+ V
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 169 FQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFF 224
F+ + P+ +T+ TL M P+ ++ L++
Sbjct: 210 FRGMPERKCLPDGYTY-CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC 268
Query: 225 KMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVV 284
K L +L+ M + G + + LIH C G LD A LL+ M+ + C PN V
Sbjct: 269 KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
TY TLI ++ R TDA L + M G+ + +++VLI K G+ ++A+ ++R +
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAG 400
+++ +P+ + + +C+ + E ++ R I P+ ++L+ K G
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKE--ILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT 460
+A + + M + G + +K+ ++VL+ LC G++ EA+ V+ + + D ++
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYS 506
Query: 461 VIIVELIKAGKYLMAATVFKQAVVRKYPL---DNVAYAVGICALLRSGRTPDACTFYDQM 517
II L G A ++ + + ++ P D V Y + + L A + M
Sbjct: 507 SIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSM 566
Query: 518 KENGLKPNAHTCNMMLFTFY-KEKDLQKVNQMLKEMI 553
+ G P+ TCN L T K K L+E++
Sbjct: 567 LDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 178/422 (42%), Gaps = 34/422 (8%)
Query: 86 LTRRHKTLQAILL--QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
L + + +A+LL +++S GC + +P + +L+ L + G + M G V
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGC--SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
PN N + G L A+++ +++ D+T L N +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 204 MLRMH---YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
+ M Y+ N + + L++ FK EA L M G + ++ V+++L+ C+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
G + A ++L M+ +GC PN TY++L+K + ++ +A ++ M G + +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD---------- 370
++VLID GR ++A+ V+ + I+PD +S + +C D
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
EP PD+V N LL L S A + + M++ G PD + L+
Sbjct: 530 CQEEPK-----SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 431 L------CAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
L C G+ + V R ++ Q IVE++ GKYL T +V
Sbjct: 585 LSEKSNSCDKGRSFLEELVVR--LLKRQRVSG---ACTIVEVM-LGKYLAPKTSTWAMIV 638
Query: 485 RK 486
R+
Sbjct: 639 RE 640
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 6/245 (2%)
Query: 315 TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD---- 370
+P+ + +N++I K A+ VFR + ++ PD YT + + +C+ D
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
LL E + P V N L+ L K G + + D M G P++ ++ L+
Sbjct: 244 LLDE--MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
LC GK+ +AV + V S + + +I L+K + A + R Y L+
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
Y+V I L + G+ +A + + +M E G KPN ++++ +E + ++L
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 551 EMIGS 555
MI S
Sbjct: 422 RMIAS 426
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 4/206 (1%)
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIE----LGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
N++L+ ++ G EFYD ++ + +P+ SF +++ ALC + A++V+R
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFR 211
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
G D + ++ L K + A + + V Y V I L + G
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFL 565
D M G PN T N ++ + L K +L+ M+ S+ +D +
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331
Query: 566 NLCNFPCRSDAYYSTSNLLAEMREMG 591
L N + LL+ M E G
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERG 357
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 164/352 (46%), Gaps = 2/352 (0%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ + P+ TF SL+N F ++ EA L+ +V LG + +V ++ +I C+ G
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
++ A +L++M G P+VVTY +LI S ++ + + M G +PD++ ++
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFR 380
LID + K G+ +A + + ++++ P+ T S ++ +C + D + LV +
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
P+ V N L++ KA D + +M G D +++ L C AGK A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
KV V D +++ L GK A + K + + Y + I
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
L ++ + DA + + G+ P+ T M+ +++ ++ +++ ++M
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 175/441 (39%), Gaps = 41/441 (9%)
Query: 89 RHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFA 148
+++ + ++ LE +G ++ + SF L+ R ++ +M GF P+
Sbjct: 94 KYEAVISLFRHLEMLG--ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 149 RNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRM 204
++ + + A+++ QI PN ++ + L K M
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVL-KHM 210
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
+M P+ T++SL+ F + ++L M+ +GI V ++ LI + + G L
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL 324
A K M+ +PN+VTY +LI + +A + N + S G P+ V +N L
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP 384
I+ + KA R D + + +S+ + D +T + CQ
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ------------------- 371
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
AG S A + M+ G PD Y+F +LL LC GKI +A+
Sbjct: 372 --------------AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRS 504
S + +II L KA K A +F ++ D + Y + L R
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Query: 505 GRTPDACTFYDQM-KENGLKP 524
+A Y +M KE+GL P
Sbjct: 478 RLWREAHELYRKMQKEDGLMP 498
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 167/393 (42%), Gaps = 2/393 (0%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M H P+ F LL A K++ L + +LGI + +T LI C+
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A L M+ G P++VT+ +L+ + NR +A +L + + G+ P++V++N
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRY 381
+ID + G+ AL V + + K I+PD T S ++ + S + + ++
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
I PD++ +AL+ K G +A + Y+ MI+ P+ ++ L++ LC G + EA
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
KV V +A + +I KA + + D Y
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
++G+ A +M G+ P+ +T N++L + K L+++ S+ +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ + C++D L + G+ P
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/481 (20%), Positives = 202/481 (41%), Gaps = 48/481 (9%)
Query: 125 GMHAMFFQAY---HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFD 181
G F +AY + ++ G +P+ A N + ++G + AL VF++
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE---------- 368
Query: 182 ITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVV 241
++ PN +T++ L++ + L A++L M
Sbjct: 369 -----------------------MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
G+ +V I++ + C+ LD A + + M + C+P+ +T+ +LI + RV D
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
A ++ M + + +++ LI GR +D +++ + QN PD L +++
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 362 MICQS-------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIE 414
+ ++ MF+ + V PD + L+ L+KAG ++ E + M E
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFV-----PDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 415 LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLM 474
G D ++ +++ C GK+ +A ++ E + +I L K +
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 475 AATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLF 534
A +F++A ++ L+ V Y+ I + GR +A +++ + GL PN +T N +L
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 535 TFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
K +++ + + M + + + L N C+ + EM++ G+ P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 595 A 595
+
Sbjct: 761 S 761
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 192/488 (39%), Gaps = 71/488 (14%)
Query: 72 QSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFF 131
+T ++ LG++ R + L+S C N + L++ + G
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDS-DC--RTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXX 191
+ Y M + P+ N +MD F+ G +F++I+ F
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV------------- 549
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
P+A ++ L++ K E Y+L M G +
Sbjct: 550 -------------------PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
I+I C+ G ++ A +LL+ M G P VVTY ++I + +R+ +A LF +S
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL 371
++V+++ LID K GR +A + L ++ + P+ YT W
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT---W------------ 695
Query: 372 LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
N+LL LVKA ++A + M EL P++ ++ +L++ L
Sbjct: 696 ------------------NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 432 CAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN 491
C K +A ++ + +T +I L KAG A +F + D+
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 492 VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK---VNQM 548
Y I L R DA + +++ + GL + TC ++L T +K L++ V +
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAV 857
Query: 549 LKEMIGSR 556
L+E +R
Sbjct: 858 LRETGKAR 865
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/517 (20%), Positives = 203/517 (39%), Gaps = 76/517 (14%)
Query: 111 PNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQ 170
P S+ LL ++ R Q +M GF P+ + + L V Q
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 171 QIQPPNF---FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
++ F F+ TL + ++M + Y P + F +L+ F K
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+ A LL M + + ++ + I ++G +D+A K + G P+ VTYT
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 288 TLIKAYMESNRVTDASNLFNHM-----------------------------------RSA 312
++I ++NR+ +A +F H+ R+
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
G P ++ +N ++ C K G+ +AL VF + K++ P+ T + M+C++ D
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 373 PE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
E ++ + P++ N ++ L K+ +A ++ M PD+ +F L+
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE------------------------- 465
L G++ +A KVY + S T++ ++T +I
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 466 ----------LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYD 515
+ KAG+ +F++ R++ D +Y++ I L+++G + +
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 516 QMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
MKE G + N+++ F K + K Q+L+EM
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 204/477 (42%), Gaps = 31/477 (6%)
Query: 152 FMDAHFRIGNLHLALTVFQQIQ-----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLR 206
F+D R G+ H ++F I N D+ + +N KR
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAF-KRSGY 181
Query: 207 MHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDV 266
Y +A + L+ A K + + + M+ IQ +V + ++I+ C+ G ++
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYME---SNRVTDASNLFNHMRSAGHTPDLVLWNV 323
A ++++M GCSPNVV+Y TLI Y + + ++ A + M +P+L +N+
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRY 381
LID K ++ VF+ + Q+++P+ + S ++ +C + +V
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ P+L+ NAL++ K +A + + + G P + +L+ A C GKI +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 442 ----KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
++ R G++ D + +I L + G A +F Q + P D V + +
Sbjct: 422 ALKEEMEREGIVP----DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHIL 476
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+ R G + A +M + GLKP T N+++ + KE +L+ M +M R
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER- 535
Query: 558 ELSDRNFLNLCNFPCRSDAYYSTSN------LLAEMREMGLLPAKALHALSSDKYAE 608
R +N+ ++ Y LL EM E GL+P + + + ++ +
Sbjct: 536 ----RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 169/408 (41%), Gaps = 53/408 (12%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFD--ITLFHL 187
Y +M PN F N+ ++A + G ++ A V + ++ PN +++ I +
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 188 SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
K M+ PN TF+ L++ F+K D L + ++ M+ ++ +
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
V + LI+ C G + A + M+ G PN++TY LI + +++ + +A ++F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS- 366
++ G P ++N+LID + K G+ D + + ++ I PD T ++ +C++
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 367 ------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
++FD L L PDLV + L+ + G AA M ++G P
Sbjct: 451 NIEAAKKLFDQLTSKGL------PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
++ +++ C G + A M + K
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATN-------------------------------MRTQMEK 533
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
+ R+ ++ +Y V + + G+ DA ++M E GL PN T
Sbjct: 534 E---RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 167/340 (49%), Gaps = 16/340 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M+++ P+ T SL+N F +++ +A + G M +GI+ V V TILI C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
++ A ++L+ M G SPNVVTY++LI +S R+ DA + M S P+++ ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEP 375
LID ++K G+ V++ + + +I P+ +T +S + +C +M DL
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL---- 178
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
++ + P++V + L + K+ D + D M + G A + S L+ AG
Sbjct: 179 -MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 436 KIYEAVKVYRGGVMSSQE--TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
KI A+ V+ G M+S + R + +++ L G+ A + F+ + LD +
Sbjct: 238 KIDLALGVF--GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
Y + I + ++ +A + ++K ++P+ +M+
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 133/290 (45%), Gaps = 6/290 (2%)
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGR 333
M+ G P++VT ++L+ + SN + DA + M G D+V+ +LID K
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 334 HQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDL---LPEPALVFRYIDPDLVFC 389
AL V + + + I P+ T +S ++ +C+S R+ D L E + + I+P+++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHE--MDSKKINPNVITF 121
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
+AL+ K G S Y +MI++ P+ ++++ L+ LC ++ EA+K+ +
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ ++ + K+ + + R + V+ I ++G+
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
A + M NGL PN + N++L + +++K + M +R +L
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 132/309 (42%), Gaps = 33/309 (10%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
KRM PN T+ SL+ K L +A + L M I +V ++ LI + +
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G L + + + M+ PNV TY++LI NRV +A + + M S G TP++V +
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
+ L + K+ R D + ++ D +P+ R
Sbjct: 192 STLANGFFKSSRVDDGI----------------------------KLLDDMPQ-----RG 218
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ + V CN L+ +AG A + M G P+ S+ ++L+ L A G++ +A+
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+ + + D +T++I + KA A +F + ++ D AY + I L
Sbjct: 279 SRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
Query: 502 LRSGRTPDA 510
R+G +A
Sbjct: 339 NRAGMRTEA 347
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 38/303 (12%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
++ N ++ L+ L ++G A + H+M S PN + +DA+ + G L
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 167 TVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM 226
+V+ K M++M PN T+ SL+
Sbjct: 139 SVY--------------------------------KMMIQMSIDPNVFTYSSLIYGLCMH 166
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
+ + EA ++L LM+ G +V ++ L + + +D KLL +M G + N V+
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 226
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
TLIK Y ++ ++ A +F +M S G P++ +N+++ G + AL F + K
Sbjct: 227 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Query: 347 QNIQPDPYTLTSWLSMICQSRM----FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
D T T + +C++ M +DL + L F+ ++PD +++ L +AG
Sbjct: 287 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYK--LKFKRVEPDFKAYTIMIAELNRAGMR 344
Query: 403 SDA 405
++A
Sbjct: 345 TEA 347
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 174/386 (45%), Gaps = 2/386 (0%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN +++++ + K+ + AY + + + G ++ + +I+ C+ G +++L
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L + G +V +I A D + + + PD+ +N+LI+ K
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF--RYIDPDLVF 388
G+ + A+G SK+ + P+ + + C+S+ +D+ + L R PD+V
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
L+ LV +GH DA +I+ G +PD + +L+S LC G+ A ++ +
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 449 MSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTP 508
+ DA ++ +I I++G + A VF +V + +D V + I RSG
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 509 DACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLC 568
+A ++M E L P+ T + ++ + K++D+ ++ + M ++ + + + +L
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 569 NFPCRSDAYYSTSNLLAEMREMGLLP 594
N C + EM+ L+P
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVP 623
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 150/335 (44%), Gaps = 9/335 (2%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T++ L+N K A L G+ + + LI +C+ D+A+KL
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M GC P++VTY LI + S + DA N+ + G +PD ++N+L+ K
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF-----RYIDPD 385
GR A +F + +NI PD Y + + +S FD E VF + + D
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD---EARKVFSLSVEKGVKVD 519
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
+V NA++ ++G +A + M E PDK++++ ++ + A+K++R
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
+ + + +T +I G + MA FK+ +R + V Y I +L +
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 506 RTPDACTFY-DQMKENGLKPNAHTCNMMLFTFYKE 539
T + +Y + M N PN T N +L F K+
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 16/407 (3%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ +SLL+ K L +A ++ M G IL+ C G ++V KL
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
++ GC PN+V Y T+I Y + + +A +F ++ G P L + +I+ K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWL--SMICQSRMFDLLPEPALVFRYI-----D 383
G D + R LS+ ++ ++ W ++I +PA +I
Sbjct: 288 EG---DFVASDRLLSE--VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
PD+ N L++ L K G A F D + G P+ S+A L+ A C + + A K+
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
+ D + ++I L+ +G A + + + R D Y + + L +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI--GSRIELSD 561
+GR A + +M + + P+A+ ++ F + D + ++ + G ++++
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAE 608
N + + F CRS + M E L+P K ++ D Y +
Sbjct: 523 HNAM-IKGF-CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 173/447 (38%), Gaps = 33/447 (7%)
Query: 101 ESIGCILTKN--PN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAH 156
ESIG I+ + P+ ++ +L+ L + G + + G +PN + + A+
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 157 FRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPN 212
+ +A + Q+ P+ T+ I L H +++ P+
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGI-LIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
A ++ L++ K L A L M+ I V+ LI + G D A K+
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
+ G +VV + +IK + S + +A N M PD ++ +ID + K
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCN 390
A+ +FR + K +P+ T TS ++ C F + E + R + P++V
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYT 629
Query: 391 ALLSYLVKAGHPSDAAEFY-DLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
L+ L K + A +Y +LM+ P++ +F LL VK G V+
Sbjct: 630 TLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF---------VKKTSGKVL 680
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ E D H G+ + + F + + AY + L G
Sbjct: 681 A--EPDGSNH----------GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTF 536
AC F D+M + G P+ + +L F
Sbjct: 729 ACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 106/285 (37%), Gaps = 52/285 (18%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
ML + P+A + +L++ F + EA ++ L V G++ V +I C+ G
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+LD A + M P+ TY+T+I Y++ + A +F +M P++V +
Sbjct: 535 MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYT 594
Query: 323 VLIDCHSKAGRHQDALGVF-------------------RSLSKQN--------------- 348
LI+ G + A F RSL+K++
Sbjct: 595 SLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMT 654
Query: 349 --IQPDPYTLTSWLSMICQSRMFDLLPEP-----------ALVFRYIDPD-----LVFCN 390
P+ T L + +L EP + F + D N
Sbjct: 655 NKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYN 714
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+ L L G A F D M++ GF+PD SFA +L C G
Sbjct: 715 SALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%)
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
PD++ CN+LLS LVK+ DA + YD M + G + D YS +L+ +C GK+ K+
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
G + + II K G A VFK+ ++ + + I +
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
G + ++KE GL+ + N ++ Y+ + + +I + +
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 564 FLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
+ L N C+ L E + GL+P +A Y +S E
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 204/471 (43%), Gaps = 11/471 (2%)
Query: 93 LQAILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARN 150
L+ L LE + NP+ ++ +L+ + + G + + M+ G VPN N
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 151 LFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLR 206
+ + ++G+L A + + ++ P+ T++I + L N M
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM-DAMKS 338
Query: 207 MHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDV 266
+ P+ T+++L++ F++ LEA +L+ M G++ + I + C+ +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 267 ANKLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
+ ++ ++ G SP++VTY TLIKAY++ ++ A + M G + + N ++
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYID 383
D K + +A + S K+ D T + + + + E + I
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P + N+L+ L G A E +D + E G PD +F ++ C G++ +A +
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
Y + S + D +++ L K G A F ++ + +D V Y I A +
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF-NTLIEEREVDTVTYNTMISAFCK 637
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
+ +A +M+E GL+P+ T N + ++ L + +++LK+ G
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSG 688
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 191/447 (42%), Gaps = 27/447 (6%)
Query: 161 NLHLALTVFQQIQPPNFFTFDITL---FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFH 217
NLHL+ PP+ FDI L H ++M+R+ PN T +
Sbjct: 122 NLHLS-------PPPSKALFDIALSAYLH----EGKPHVALQIFQKMIRLKLKPNLLTCN 170
Query: 218 SLLNAFFKMDA---LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
+LL + + + A ++ MV +G+ +V + +L++ +C G L+ A +L+ M
Sbjct: 171 TLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM 230
Query: 275 LHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGR 333
+ +P+ VTY T++KA + R++D L M+ G P+ V +N L+ + K G
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 334 HQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALVFRYIDPDLVFC 389
++A + + + N+ PD T ++ +C + +L+ A+ + PD+V
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM--DAMKSLKLQPDVVTY 348
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV--KVYRGG 447
N L+ + G +A + + M G ++ + + L LC K EAV KV
Sbjct: 349 NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKELV 407
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
M D + +I +K G A + ++ + ++ + + AL + +
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
+A + + G + T ++ F++E+ ++K +M EM +I + F +L
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLP 594
C E+ E GLLP
Sbjct: 528 IGGLCHHGKTELAMEKFDELAESGLLP 554
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 171/426 (40%), Gaps = 43/426 (10%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T++++L A K L + +LL M G+ + + L++ +C+LG L A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
++ M T P++ TY LI + + + L + M+S PD+V +N LID +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PD 385
G +A + + ++ + T L +C+ + + V +D PD
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK--VKELVDMHGFSPD 415
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA----- 440
+V + L+ +K G S A E M + G + + +L ALC K+ EA
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 441 ------------------------VKVYRGGVMSSQETDARIHTVI------IVELIKAG 470
KV + M + +I + I L G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 471 KYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCN 530
K +A F + D+ + I + GR A FY++ ++ KP+ +TCN
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 531 MMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREM 590
++L KE +K +I R E+ + + + C+ +LL+EM E
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 591 GLLPAK 596
GL P +
Sbjct: 655 GLEPDR 660
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 6/296 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L + N LL LH P+ + + AY+ + A +F M P+L+ N
Sbjct: 112 LSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNT 171
Query: 324 LIDC---HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLP--EPAL 377
L+ + + A VF + K + + T ++ C + ++ D L E +
Sbjct: 172 LLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
++PD V N +L + K G SD E M + G P++ ++ L+ C G +
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
EA ++ ++ D + ++I L AG + K D V Y
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
I G + +A +QM+ +G+K N T N+ L KE+ + V + +KE++
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 220/504 (43%), Gaps = 28/504 (5%)
Query: 65 SQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRA 124
RR D + +++ V G L ++ ++ G +P+ F L+R +
Sbjct: 106 GSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACG----SSPDVFDSLVRACTQN 161
Query: 125 GMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTF 180
G ++ Q ++ GF + A N FM + + V++++ N TF
Sbjct: 162 GDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTF 221
Query: 181 DITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMV 240
++ ++ RML+ +PN +F+ +++ K + A QLLG M
Sbjct: 222 NLVIYSFCKESKLFEALSVFY-RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 241 VLGIQF---SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESN 297
++ F + + +I+ C+ G LD+A ++ +M+ +G N TY L+ AY +
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 298 RVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLT 357
+A L + M S G + V++N ++ G + A+ V R ++ +N+Q D +T
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 358 SWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLM 412
+ +C++ + E R I D+V N L+ + V+ + A + M
Sbjct: 401 IVVRGLCRN---GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 413 IELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKY 472
+ G + D SF L+ GK+ A+++Y G + ++ ++ I+ I+ L K G
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG-- 515
Query: 473 LMAATVFKQAVVRKYPL-DNVAYAVGICALLRSGRTPDACTFYDQM-KENGLKP-NAHTC 529
MA +AVV + D V Y + L++G +A +M K++G K + T
Sbjct: 516 -MAGAA--EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 530 NMMLFTFYKEKDLQKVNQMLKEMI 553
N+M+ K +K ++LK M+
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKFMV 596
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 125/326 (38%), Gaps = 40/326 (12%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
N ++ L+ RAG + +M S G V NT N + F G++ A++V
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 170 QQIQPPNF----FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
+ + N FT I + L +++ + ++L++ F +
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ-RQISEKKLVEDIVCHNTLMHHFVR 443
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
L A Q+LG M+V G+ + LI + + G L+ A ++ M+ + N+V
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y +++ + A + N M D+V +N L++ K G ++A + +
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAM----EIKDIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDA 405
KQ+ + LV N ++++L K G A
Sbjct: 560 KQDGEKSV-------------------------------SLVTFNIMINHLCKFGSYEKA 588
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSAL 431
E M+E G PD ++ L+++
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSF 614
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 183/425 (43%), Gaps = 14/425 (3%)
Query: 122 WRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNF 177
WR + + +M G P+ N+ + A+ AL+ F+ ++ P+
Sbjct: 229 WREAL-----EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 178 FTFDITLFHLSNXXXXXXXXXXXXK-RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
TF+I ++ LS R R P+ TF S+++ + + +
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
MV G++ ++ + L+ + G+ A +L ++ G P+VV+YT L+ +Y S
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTL 356
+ A +F MR P++V +N LID + G +A+ +FR + + I+P+ ++
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 357 TSWLSMICQSRM---FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
+ L+ +S+ D + A R I+ + N+ + + A A Y M
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYL 473
+ D +F +L+S C K EA+ + S +++ ++ K G+
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 474 MAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
A ++F Q + D +AY + A S + AC + +M+ NG++P++ C+ ++
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Query: 534 FTFYK 538
F K
Sbjct: 643 RAFNK 647
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 190/481 (39%), Gaps = 50/481 (10%)
Query: 122 WRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNF 177
W +FF+ MQ + P+ + ++AH R G A+ + + P+
Sbjct: 158 WVDQARGLFFE----MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSR 213
Query: 178 FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLG 237
T++ L + K+M P+ T + +L+A+ +A
Sbjct: 214 STYN-NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE 272
Query: 238 LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH--TGCSPNVVTYTTLIKAYME 295
LM ++ + I+I+ +LG A L +M C P+VVT+T+++ Y
Sbjct: 273 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 332
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ + +F M + G P++V +N L+ ++ G AL V + + I PD +
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 356 LTSWLSMICQSRMFDLLPEPALVFR--YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
T L+ +SR E L+ R P++V NAL+ G ++A E + M
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 414 ELGFAPDKYSFAVLLSALCA------------------------------------AGKI 437
+ G P+ S LL+A C+ A ++
Sbjct: 453 QDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
+A+ +Y+ + D+ T++I + KY A + K+ PL Y+
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+CA + G+ +A + ++QMK G +P+ ML + + K ++ EM + I
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Query: 558 E 558
E
Sbjct: 632 E 632
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 187/447 (41%), Gaps = 47/447 (10%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+A T+ +L+NA + A L+ M+ I S + + LI+ G A ++
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ M G P++VT+ ++ AY + + A + F M+ A PD +N++I C SK
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 331 AGRHQDALGVFRSLSKQNIQ--PDPYTLTSWL-----------------SMICQSRMFDL 371
G+ AL +F S+ ++ + PD T TS + +M+ + ++
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 372 LPEPALVFRY--------------------IDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
+ AL+ Y I PD+V LL+ ++ P A E + +
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M + P+ ++ L+ A + G + EAV+++R + + ++ ++ K
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
+ TV A R L+ AY I + + + A Y M++ +K ++ T +
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN-LCNFPCRSDAYYSTSNLLAEMREM 590
++ + + LKEM I L+ + + LC + + + S + +M+
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES-IFNQMKMA 594
Query: 591 GLLP-----AKALHAL-SSDKYAESLE 611
G P LHA +S+K+ ++ E
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACE 621
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 145/392 (36%), Gaps = 43/392 (10%)
Query: 57 ALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLL 116
A F + RR VT + ++ G + ++ I Q+E G + N S
Sbjct: 409 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE-IFRQMEQDG--IKPNVVSVCT 465
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPN 176
LL R+ QS G NT A N + ++ L A+ ++Q
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS----- 520
Query: 177 FFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
M + ++ TF L++ +M EA L
Sbjct: 521 ---------------------------MRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
M L I + V++ ++ + + G + A + M GC P+V+ YT+++ AY S
Sbjct: 554 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTL 356
+ A LF M + G PD + + L+ +K G+ + + + ++ I P+T
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---PFTG 670
Query: 357 TSWLSMICQSRMFDLLPEPALVFRYIDP-----DLVFCNALLSYLVKAGHPSDAAEFYDL 411
+ + + + +DP + N +L K+G + +
Sbjct: 671 AVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYK 730
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
+I G + ++A+LL L A G + ++V
Sbjct: 731 IIASGVGINLKTYAILLEHLLAVGNWRKYIEV 762
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 134/346 (38%), Gaps = 46/346 (13%)
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
+++ ++I H + +D A L M C P+ TY LI A+ + + A NL +
Sbjct: 144 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 203
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
M A P +N LI+ +G ++AL V + ++
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG-------------------- 243
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
+ PDLV N +LS S A +++LM PD +F +++
Sbjct: 244 -------------VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIK----AGKYLMAATVFKQAVV 484
L G+ +A+ ++ M + + R V ++ G+ VF+ V
Sbjct: 291 YCLSKLGQSSQALDLFNS--MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ V+Y + A G + A + +K+NG+ P+ + +L ++ + + K
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREM 590
++ M +R N+ + DA Y ++ LAE E+
Sbjct: 409 AKEVFLMM------RKERRKPNVVTYNALIDA-YGSNGFLAEAVEI 447
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 183/425 (43%), Gaps = 14/425 (3%)
Query: 122 WRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNF 177
WR + + +M G P+ N+ + A+ AL+ F+ ++ P+
Sbjct: 97 WREAL-----EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 151
Query: 178 FTFDITLFHLSNXXXXXXXXXXXXK-RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
TF+I ++ LS R R P+ TF S+++ + + +
Sbjct: 152 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
MV G++ ++ + L+ + G+ A +L ++ G P+VV+YT L+ +Y S
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTL 356
+ A +F MR P++V +N LID + G +A+ +FR + + I+P+ ++
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
Query: 357 TSWLSMICQSRM---FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
+ L+ +S+ D + A R I+ + N+ + + A A Y M
Sbjct: 332 CTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYL 473
+ D +F +L+S C K EA+ + S +++ ++ K G+
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 450
Query: 474 MAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
A ++F Q + D +AY + A S + AC + +M+ NG++P++ C+ ++
Sbjct: 451 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Query: 534 FTFYK 538
F K
Sbjct: 511 RAFNK 515
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 190/481 (39%), Gaps = 50/481 (10%)
Query: 122 WRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNF 177
W +FF+ MQ + P+ + ++AH R G A+ + + P+
Sbjct: 26 WVDQARGLFFE----MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSR 81
Query: 178 FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLG 237
T++ L + K+M P+ T + +L+A+ +A
Sbjct: 82 STYN-NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE 140
Query: 238 LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH--TGCSPNVVTYTTLIKAYME 295
LM ++ + I+I+ +LG A L +M C P+VVT+T+++ Y
Sbjct: 141 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 200
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ + +F M + G P++V +N L+ ++ G AL V + + I PD +
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 356 LTSWLSMICQSRMFDLLPEPALVFRYI--DPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
T L+ +SR E L+ R P++V NAL+ G ++A E + M
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 414 ELGFAPDKYSFAVLLSALCA------------------------------------AGKI 437
+ G P+ S LL+A C+ A ++
Sbjct: 321 QDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
+A+ +Y+ + D+ T++I + KY A + K+ PL Y+
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+CA + G+ +A + ++QMK G +P+ ML + + K ++ EM + I
Sbjct: 440 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Query: 558 E 558
E
Sbjct: 500 E 500
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 187/447 (41%), Gaps = 47/447 (10%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+A T+ +L+NA + A L+ M+ I S + + LI+ G A ++
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ M G P++VT+ ++ AY + + A + F M+ A PD +N++I C SK
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 331 AGRHQDALGVFRSLSKQNIQ--PDPYTLTSWL-----------------SMICQSRMFDL 371
G+ AL +F S+ ++ + PD T TS + +M+ + ++
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 372 LPEPALVFRY--------------------IDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
+ AL+ Y I PD+V LL+ ++ P A E + +
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M + P+ ++ L+ A + G + EAV+++R + + ++ ++ K
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
+ TV A R L+ AY I + + + A Y M++ +K ++ T +
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN-LCNFPCRSDAYYSTSNLLAEMREM 590
++ + + LKEM I L+ + + LC + + + S + +M+
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES-IFNQMKMA 462
Query: 591 GLLP-----AKALHAL-SSDKYAESLE 611
G P LHA +S+K+ ++ E
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACE 489
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 145/392 (36%), Gaps = 43/392 (10%)
Query: 57 ALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLL 116
A F + RR VT + ++ G + ++ I Q+E G + N S
Sbjct: 277 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE-IFRQMEQDG--IKPNVVSVCT 333
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPN 176
LL R+ QS G NT A N + ++ L A+ ++Q
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS----- 388
Query: 177 FFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
M + ++ TF L++ +M EA L
Sbjct: 389 ---------------------------MRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
M L I + V++ ++ + + G + A + M GC P+V+ YT+++ AY S
Sbjct: 422 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTL 356
+ A LF M + G PD + + L+ +K G+ + + + ++ I P+T
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI---PFTG 538
Query: 357 TSWLSMICQSRMFDLLPEPALVFRYIDP-----DLVFCNALLSYLVKAGHPSDAAEFYDL 411
+ + + + +DP + N +L K+G + +
Sbjct: 539 AVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYK 598
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
+I G + ++A+LL L A G + ++V
Sbjct: 599 IIASGVGINLKTYAILLEHLLAVGNWRKYIEV 630
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 134/346 (38%), Gaps = 46/346 (13%)
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
+++ ++I H + +D A L M C P+ TY LI A+ + + A NL +
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
M A P +N LI+ +G ++AL V + ++
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG-------------------- 111
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
+ PDLV N +LS S A +++LM PD +F +++
Sbjct: 112 -------------VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 158
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIK----AGKYLMAATVFKQAVV 484
L G+ +A+ ++ M + + R V ++ G+ VF+ V
Sbjct: 159 YCLSKLGQSSQALDLFNS--MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ V+Y + A G + A + +K+NG+ P+ + +L ++ + + K
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 276
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREM 590
++ M +R N+ + DA Y ++ LAE E+
Sbjct: 277 AKEVFLMM------RKERRKPNVVTYNALIDA-YGSNGFLAEAVEI 315
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 201/486 (41%), Gaps = 30/486 (6%)
Query: 129 MFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITL 184
M + Y M+ GF PN F N+ + A + + A + ++ P+ ++ +
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 185 FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGI 244
+ R L + P + +++L+N K A++L+ MV GI
Sbjct: 224 SSMCEVGLVKE------GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
+V ++ LI+ C G +++A L ML GC PN+ T ++L+K DA +
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD 337
Query: 305 LFNHM-RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI 363
L+N M R G P++V +N L+ G A+ VF + + P+ T S ++
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 364 CQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDK 421
+ D + ++ P++V ++ L + +A ++M + AP
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 422 YSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI----KAGKYLMAAT 477
+F + LC AG++ A KV+R Q+ + V EL+ KA + A
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFR---QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+ ++ +R + Y + +G A +M +G P+ T NM++ +
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 538 KEKDLQKVNQMLKEMIGSRIE-----LSDRNFL-NLCNFPCRSDAYYSTSNLLAEMREMG 591
K+ ++ QML + R + +S N + LC CR D LL M G
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI----LLERMISAG 630
Query: 592 LLPAKA 597
++P+ A
Sbjct: 631 IVPSIA 636
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 159/413 (38%), Gaps = 40/413 (9%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFH 186
F+ +M G PN + + ++ G + LA + Q+ PN +T +L
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS-SLVK 324
Query: 187 LSNXXXXXXXXXXXXKRMLR-MHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQ 245
+M+R PN +++L+ F +++A + M +G
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
++ + LI+ + G LD A + ML +GC PNVV YT +++A ++ +A +L
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
M P + +N I AGR A VFR + +Q+ P
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-------------- 490
Query: 366 SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
P++V N LL L KA +A + G ++
Sbjct: 491 ------------------PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 426 VLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV- 484
LL C AG A+++ ++ + D +II+ K GK AA +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592
Query: 485 -RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTF 536
RK+ D ++Y I L RS D ++M G+ P+ T ++++ F
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 168/388 (43%), Gaps = 16/388 (4%)
Query: 215 TFHSLLNAFFKMDALLEAYQ-LLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
TF ++ MD +++ Q LL M + G S +++ +I + Q+G+ + A ++
Sbjct: 78 TFEVMIRKL-AMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGR 333
+ GC P+V Y ++ + NR+ ++ M+ G P++ +NVL+ K +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 334 HQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALL 393
A + +S + PD + T+ +S +C+ L+ E + +P + NAL+
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE---VGLVKEGRELAERFEPVVSVYNALI 253
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE 453
+ L K A E M+E G +P+ S++ L++ LC +G+I A M +
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ--MLKRG 311
Query: 454 TDARIHTVIIVELIKA----GKYLMAATVFKQAVVRKYPL--DNVAYAVGICALLRSGRT 507
I+T + L+K G A ++ Q ++R + L + VAY + G
Sbjct: 312 CHPNIYT--LSSLVKGCFLRGTTFDALDLWNQ-MIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A + + M+E G PN T ++ F K L + +M+ S + + N+
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLPA 595
CR + +L+ M + P+
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPS 456
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 214/494 (43%), Gaps = 18/494 (3%)
Query: 112 NSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFAR-NLFMDAHFRIGNLHLALTVFQ 170
++++ L+R L A ++ ++ ++ +V + A + + A R + AL+VF
Sbjct: 127 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 186
Query: 171 QIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM 226
Q + P T++ + L + +P+ T+ +L++++ K+
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
A +L M +Q + ++T L+ + ++G ++ A L + M GCSP V TY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
T LIK ++ RV +A + M G TPD+V N L++ K GR ++ VF +
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 347 QNIQPDPYTLTSWLSMICQSRM--------FDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
P + + + + +S+ FD + + + P + L+ K
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS-----VSPSEFTYSILIDGYCK 421
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI 458
A + M E GF P ++ L++AL A + A ++++ + +R+
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV 481
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
+ V+I K GK A +F + + D AY + ++++G +A + +M+
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYY 578
ENG + + ++ N++L F + ++ +M + + S I+ + L + +
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 579 STSNLLAEMREMGL 592
+ ++ EM++ G
Sbjct: 602 EAARMMREMKDKGF 615
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 202/469 (43%), Gaps = 22/469 (4%)
Query: 78 HMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQM 137
+V LGR K L ++ Q + C T + + ++L+ L + G H + Y +M
Sbjct: 167 ELVKALGRAKMVSKAL-SVFYQAKGRKCKPTSSTYNSVILM--LMQEGQHEKVHEVYTEM 223
Query: 138 QSYG-FVPNTFARNLFMDAHFRIGNLHLALTVFQQI-----QP-PNFFTFDITLFHLSNX 190
+ G P+T + + ++ ++G A+ +F ++ QP +T TL +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYT---TLLGIYFK 280
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
+ M R P T+ L+ K + EAY M+ G+ V
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVF 340
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESN-RVTDASNLFNHM 309
L++ ++G ++ + M C+P VV+Y T+IKA ES V++ S+ F+ M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
++ +P +++LID + K R + AL + + ++ P P S ++ + +++ +
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 370 DLLPEPALVFRYIDPDLVFCNA-----LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
+ E +F+ + + ++ ++ + K G S+A + ++ M G PD Y++
Sbjct: 461 EAANE---LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
L+S + AG I EA + R + D H +I+ + G A +F+
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
D V Y + +G +A +MK+ G + +A T + +L
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 141/344 (40%), Gaps = 18/344 (5%)
Query: 99 QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFR 158
+++ GC T ++ L++ L +AG + Y M G P+ N M+ +
Sbjct: 293 EMKRAGCSPT--VYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 159 IGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNAN 214
+G + VF ++ P +++ + L +M P+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
T+ L++ + K + + +A LL M G + LI+ + + AN+L + +
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
+ + Y +IK + + ++++A +LFN M++ G PD+ +N L+ KAG
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLV 387
+A + R + + + D + L+ ++ MF+ + I PD V
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG-----IKPDGV 585
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
N LL AG +AA M + GF D +++ +L A+
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 74 VTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQA 133
V +++++ +LG++ R + L + ++ C T S+ +++ L+ + H +
Sbjct: 339 VFLNNLMNILGKVGRVEE-LTNVFSEMGMWRC--TPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 134 -YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXX 192
+ +M++ P+ F ++ +D + + + AL + +++ F L N
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 193 XXXXXXXXXK--RMLRMHYYP-NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
+ + L+ ++ ++ + ++ F K L EA L M G V
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+ L+ + G+++ AN LL+ M GC ++ ++ ++ + + A +F +
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI 363
+ +G PD V +N L+ C + AG ++A + R + + + D T +S L +
Sbjct: 576 KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 62/131 (47%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ +++L++ K + EA LL M G + +N I+++ + G+ A ++
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ + H+G P+ VTY TL+ + + +A+ + M+ G D + ++ ++D
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Query: 331 AGRHQDALGVF 341
+D + F
Sbjct: 632 VDHEKDDVSSF 642
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 155/384 (40%), Gaps = 33/384 (8%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN+ ++ L++ ++ L EA+ L M G Q S +T+LI C G++D A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
M+ GC PNV TYT LI ++ +A+ + M P ++ +N LI+ + K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCN 390
GR A + + K+ +P+ T N
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTF---------------------------------N 410
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
L+ L + G P A M++ G +PD S+ VL+ LC G + A K+
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
E D T II K GK +A+ + + LD V I + + G+T DA
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNF 570
+ + + + H+ N++L K +++ ML ++ + S + L +
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 571 PCRSDAYYSTSNLLAEMREMGLLP 594
RS + +L M+ G LP
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLP 614
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 181/429 (42%), Gaps = 46/429 (10%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
N S+ +L+ L G F QM G P+T + + A G + A +F
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 170 QQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
++ P PN T+ + + L ++M++ +P+ T+++L+N + K
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC-RKMVKDRIFPSVITYNALINGYCK 383
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
++ A++LL +M + +V + L+ C++G A LL+ ML G SP++V+
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 286 Y-----------------------------------TTLIKAYMESNRVTDASNLFNHMR 310
Y T +I A+ + + AS M
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G + D V LID K G+ +DAL + +L K I P++L L M+ S+
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML--SKGCK 561
Query: 371 LLPEPALVFRY----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
+ E A++ + + P +V L+ L+++G + + +LM G P+ Y + +
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 427 LLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK 486
+++ LC G++ EA K+ S + +TV++ + GK A + V R
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 487 YPLDNVAYA 495
Y L++ Y+
Sbjct: 682 YELNDRIYS 690
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 161/394 (40%), Gaps = 15/394 (3%)
Query: 79 MVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQ 138
+V ++ L +TL+A L E + ++ LL+ + G +M+
Sbjct: 307 LVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME 366
Query: 139 SYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXX 194
G P+ +L +DA+ G A V ++++ PN F F L +
Sbjct: 367 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ 426
Query: 195 XXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTIL 254
K M + P+ ++ +++ F K + L A M+ GI+ W L
Sbjct: 427 KTFQVL-KEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 255 IHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH 314
I HC+ G VA ++ + M GC P TY +I +Y + R D L M+S G
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 315 TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE 374
P++V L+D + K+GR DA+ + ++P + ++ Q L E
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG----LSE 601
Query: 375 PAL-VFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
A+ FR + P L+ N+L++ + ++A M E G PD ++ L+
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
AL K + VY +MS + D + +++
Sbjct: 662 KALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 186/452 (41%), Gaps = 29/452 (6%)
Query: 113 SFLLLLRILWRA-GMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ 171
S+ LL IL A G ++A+ Q P T+ N + A R ++ AL + +
Sbjct: 165 SYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTY--NALIGACARNNDIEKALNLIAK 222
Query: 172 IQP----PNFFTFDITLFHLSNXXXXXXXXXXXX-KRMLRMHYYPNANTFHSLLNAFFKM 226
++ +F + + + L+ K + R + + ++ F K
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
+A QLLG+ G+ +I G A L + + +G P Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
L+K Y+++ + DA ++ + M G +PD +++LID + AGR + A V + +
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 347 QNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
++QP+ + + L+ + F +L E + + PD F N ++ K
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG--VKPDRQFYNVVIDTFGKFNCL 460
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK------IYEAVKVYRGGVMSSQETDA 456
A +D M+ G PD+ ++ L+ C G+ ++EA++ RG + + +
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME-RRGCLPCATTYNI 519
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
I++ E K L+ + Q ++ V + + +SGR DA ++
Sbjct: 520 MINSYGDQERWDDMKRLL-GKMKSQGILPNV----VTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDL--QKVN 546
MK GLKP++ N L Y ++ L Q VN
Sbjct: 575 MKSVGLKPSSTMYN-ALINAYAQRGLSEQAVN 605
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 142/347 (40%), Gaps = 37/347 (10%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ +T+ L++A+ A +L M +Q + V++ L+ G ++
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L+ M G P+ Y +I + + N + A F+ M S G PD V WN LIDCH K
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVF 388
GRH A +F ++ ++ P T ++ +D + + + I P++V
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
L+ K+G +DA E + M +G P + L++A G +AV +R
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR--- 608
Query: 449 MSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTP 508
+M + K +++ L+++ A G R
Sbjct: 609 ------------------------VMTSDGLKPSLL---ALNSLINAFG-----EDRRDA 636
Query: 509 DACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS 555
+A MKENG+KP+ T ++ + QKV + +EMI S
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 144/345 (41%), Gaps = 48/345 (13%)
Query: 250 VWTILIHKHCQLGILDVANKLLQN-MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
+++ILIH L + KL + +L + +TY LI A +N + A NL
Sbjct: 169 LYSILIHA------LGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
MR G+ D V ++++I +++ + D++ + R L K+ I+ D L
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKI-DSVMLLR-LYKE-IERDKLEL------------ 267
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
D+ N ++ K+G PS A + + G + + ++
Sbjct: 268 ----------------DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 311
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
SAL +G+ EA ++ S + R + ++ +K G A ++ + R
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
D Y++ I A + +GR A +M+ ++PN+ + +L F + QK Q+
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 549 LKEM--IGSRIELSDRNFLNLC-----NFPCRSDAYYSTSNLLAE 586
LKEM IG + DR F N+ F C A + +L+E
Sbjct: 432 LKEMKSIGVK---PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 138/365 (37%), Gaps = 33/365 (9%)
Query: 244 IQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDAS 303
++ V + +I + G A +LL TG S T ++I A +S R +A
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 304 NLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI 363
LF +R +G P +N L+ + K G +DA + + K+ + PD +T +
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS------ 378
Query: 364 CQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
L+ V AG A M P+ +
Sbjct: 379 ---------------------------LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV 411
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
F+ LL+ G+ + +V + + D + + V+I K A T F + +
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 484 VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ 543
D V + I + GR A ++ M+ G P A T N+M+ ++ ++
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 544 KVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSS 603
+ ++L +M I + L + +S + L EM+ +GL P+ ++
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 604 DKYAE 608
+ YA+
Sbjct: 592 NAYAQ 596
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 155/400 (38%), Gaps = 19/400 (4%)
Query: 219 LLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTG 278
L++A + + L EA+ L + + ++ LI + ++ A L+ M G
Sbjct: 173 LIHALGRSEKLYEAFLLSQKQTLTPLTYNA-----LIGACARNNDIEKALNLIAKMRQDG 227
Query: 279 CSPNVVTYTTLIKAYMESNRVTDAS--NLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
+ V Y+ +I++ SN++ L+ + D+ L N +I +K+G
Sbjct: 228 YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFC 389
AL + + TL S +S + S +F+ L + I P
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG-----IKPRTRAY 342
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
NALL VK G DA M + G +PD++++++L+ A AG+ A V +
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ ++ + + ++ G++ V K+ D Y V I +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
A T +D+M G++P+ T N ++ K +M + M + + N
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 570 FPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAES 609
+ + LL +M+ G+LP H D Y +S
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 177/415 (42%), Gaps = 5/415 (1%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N +T+ ++++ + L +A L I SV + ++ +C+LG +D+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+L G P+V ++ LI + +A L + M G PD V +N+L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL---LPEPALVFRYIDPDLVF 388
G A V R + + + PD T T L CQ D+ L + L + ++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
C+ +LS L K G +A ++ M G +PD ++++++ LC GK A+ +Y
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 449 MSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTP 508
++R H +++ L + G L A ++ + LD V Y + I +SG
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 509 DACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLC 568
+A + + E G+ P+ T N +++ + K +++ + ++L + + S ++ L
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 569 NFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAEVNTE 623
+ S L EM+ G+ P +++ K+E+C V E
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW--KHENCNHVLRE 598
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 165/410 (40%), Gaps = 65/410 (15%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
+L+ P+ + + L+N + ++ EA +L M G++ + IL LG+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTL---------------------------------- 289
+ A +++++ML G SP+V+TYT L
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 290 --IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
+ ++ R+ +A +LFN M++ G +PDLV ++++I K G+ AL ++ + +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP----DLVFCNALLSYLVKAGHPS 403
I P+ T + L +CQ M LL +L+ I D+V N ++ K+G
Sbjct: 428 RILPNSRTHGALLLGLCQKGM--LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
+A E + ++IE G P +F L+ C I EA K+ + +T ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
G + ++ P NV Y+V L R + EN
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-----------HEN--- 591
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR 573
CN +L +E+ +K Q L++M I + + + CR
Sbjct: 592 -----CNHVL----RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 198/496 (39%), Gaps = 36/496 (7%)
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
C L + S +L+ L G A + M +G P++ N+ +G +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 165 ALTVFQQIQ----PPNFFTFDITLF---HLSNXXXXXXXXXXXXKRMLRMHYYPNANTFH 217
A V + + P+ T+ I L L N R ++ +
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV-- 368
Query: 218 SLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT 277
+L+ K + EA L M G+ + ++I+IH C+LG D+A L M
Sbjct: 369 -MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
PN T+ L+ + + +A +L + + S+G T D+VL+N++ID ++K+G ++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCN 390
L +F+ + + I P T S + C++ ++ D++ L P +V
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA-----PSVVSYT 542
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK-----------IYE 439
L+ G+ E M G P +++V+ LC K I+E
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD--NVAYAVG 497
K + S +I I++ + K+L A VF + +++ LD + Y +
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-IMKSRNLDASSATYNIL 661
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I +L G A +F ++E + + ++ + D + ++ +++
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 558 ELSDRNFLNLCNFPCR 573
+S R++ + N CR
Sbjct: 722 NVSIRDYSAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 177/415 (42%), Gaps = 5/415 (1%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N +T+ ++++ + L +A L I SV + ++ +C+LG +D+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+L G P+V ++ LI + +A L + M G PD V +N+L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL---LPEPALVFRYIDPDLVF 388
G A V R + + + PD T T L CQ D+ L + L + ++
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
C+ +LS L K G +A ++ M G +PD ++++++ LC GK A+ +Y
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 449 MSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTP 508
++R H +++ L + G L A ++ + LD V Y + I +SG
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 509 DACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLC 568
+A + + E G+ P+ T N +++ + K +++ + ++L + + S ++ L
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 569 NFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAEVNTE 623
+ S L EM+ G+ P +++ K+E+C V E
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW--KHENCNHVLRE 598
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 165/410 (40%), Gaps = 65/410 (15%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
+L+ P+ + + L+N + ++ EA +L M G++ + IL LG+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTL---------------------------------- 289
+ A +++++ML G SP+V+TYT L
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 290 --IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
+ ++ R+ +A +LFN M++ G +PDLV ++++I K G+ AL ++ + +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP----DLVFCNALLSYLVKAGHPS 403
I P+ T + L +CQ M LL +L+ I D+V N ++ K+G
Sbjct: 428 RILPNSRTHGALLLGLCQKGM--LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
+A E + ++IE G P +F L+ C I EA K+ + +T ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
G + ++ P NV Y+V L R + EN
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-----------HEN--- 591
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR 573
CN +L +E+ +K Q L++M I + + + CR
Sbjct: 592 -----CNHVL----RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 198/496 (39%), Gaps = 36/496 (7%)
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
C L + S +L+ L G A + M +G P++ N+ +G +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 165 ALTVFQQIQ----PPNFFTFDITLF---HLSNXXXXXXXXXXXXKRMLRMHYYPNANTFH 217
A V + + P+ T+ I L L N R ++ +
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV-- 368
Query: 218 SLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT 277
+L+ K + EA L M G+ + ++I+IH C+LG D+A L M
Sbjct: 369 -MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
PN T+ L+ + + +A +L + + S+G T D+VL+N++ID ++K+G ++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCN 390
L +F+ + + I P T S + C++ ++ D++ L P +V
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA-----PSVVSYT 542
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK-----------IYE 439
L+ G+ E M G P +++V+ LC K I+E
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD--NVAYAVG 497
K + S +I I++ + K+L A VF + +++ LD + Y +
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-IMKSRNLDASSATYNIL 661
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I +L G A +F ++E + + ++ + D + ++ +++
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 558 ELSDRNFLNLCNFPCR 573
+S R++ + N CR
Sbjct: 722 NVSIRDYSAVINRLCR 737
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 159/380 (41%), Gaps = 36/380 (9%)
Query: 66 QRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAG 125
+RR++ Q M+ LGR + T+ + + G +F L+ R+G
Sbjct: 226 ERRKNEQGKLASAMISTLGRYGK--VTIAKRIFETAFAGG-YGNTVYAFSALISAYGRSG 282
Query: 126 MHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLF 185
+H ++ M+ YG PN N +DA + G F+Q+ FF
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG------MEFKQV--AKFF------- 327
Query: 186 HLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQ 245
M R P+ TF+SLL + A L M I+
Sbjct: 328 ----------------DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
V + L+ C+ G +D+A ++L M PNVV+Y+T+I + ++ R +A NL
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
F MR G D V +N L+ ++K GR ++AL + R ++ I+ D T + L +
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 366 SRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
+D + + + ++ P+L+ + L+ K G +A E + G D
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 424 FAVLLSALCAAGKIYEAVKV 443
++ L+ ALC G + AV +
Sbjct: 552 YSALIDALCKNGLVGSAVSL 571
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 44/343 (12%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI----KAYMESNR 298
G +V ++ LI + + G+ + A + +M G PN+VTY +I K ME +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
V + F+ M+ G PD + +N L+ S+ G + A +F ++ + I+ D ++ +
Sbjct: 323 V---AKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 359 WLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
L IC+ DL E + + I P++V + ++ KAG +A + M LG
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 417 FAPDKYSFAVLLSALCAAGKIYEAVKVYR------------------GGVMSSQETD--- 455
A D+ S+ LLS G+ EA+ + R GG + D
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 456 ------ARIH--------TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
R H + +I K G Y A +F++ D V Y+ I AL
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
++G A + D+M + G+ PN T N ++ F + + +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 145/348 (41%), Gaps = 7/348 (2%)
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+ +I + G + +A ++ + G V ++ LI AY S +A ++FN M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 312 AGHTPDLVLWNVLIDCHSKAG-RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G P+LV +N +ID K G + F + + +QPD T S L++ + +++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 371 ----LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
L E + R I+ D+ N LL + K G A E M P+ S++
Sbjct: 357 AARNLFDE--MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 427 LLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK 486
++ AG+ EA+ ++ D + ++ K G+ A + ++
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
D V Y + + G+ + + +MK + PN T + ++ + K ++
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 547 QMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ +E + + + L + C++ S +L+ EM + G+ P
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 111 PN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
PN S+ ++ +AG + +M+ G + + N + + ++G AL +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXK---RMLRMHYYPNANTFHSLLNAFFK 225
+++ +T L K M R H PN T+ +L++ + K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
EA ++ G++ V +++ LI C+ G++ A L+ M G SPNVVT
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 286 YTTLIKAYMES---NRVTDASN 304
Y ++I A+ S +R D SN
Sbjct: 587 YNSIIDAFGRSATMDRSADYSN 608
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 214/491 (43%), Gaps = 21/491 (4%)
Query: 79 MVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQ 138
M+ +LGR K L+ + ++ S G ++++ S+ L+ R G + + +M+
Sbjct: 147 MISLLGREGLLDKCLE-VFDEMPSQG--VSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 139 SYGFVPNTFARNLFMDAHFRIG-NLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXX 193
+ P+ N ++A R G + L +F +++ P+ T++ TL
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYN-TLLSACAIRGL 262
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
+ M P+ T+ L+ F K+ L + LLG M G + + +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
L+ + + G + A + M GC+PN TY+ L+ + +S R D LF M+S+
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP 373
PD +N+LI+ + G ++ + +F + ++NI+PD + ++ +I L
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD---METYEGIIFACGKGGLHE 439
Query: 374 EPALVFRYIDP-DLVFCNALLSYLVKA-GHPS---DAAEFYDLMIELGFAPDKYSFAVLL 428
+ + +Y+ D+V + + +++A G + +A ++ M E+G P +F LL
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAA-TVFKQAVVRKY 487
+ G + E+ + V S + I + GK+ A T R
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 488 PLDNVAYAVGICALLRSGRTPDAC-TFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
P + AV ++ R D C +++MK + + P+ MML + K + VN
Sbjct: 560 PDERTLEAV--LSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 547 QMLKEMIGSRI 557
++L+EM+ +R+
Sbjct: 618 ELLEEMLSNRV 628
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 156/359 (43%), Gaps = 10/359 (2%)
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
++TI+I + G+LD ++ M G S +V +YT LI AY + R + L + M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDA-LGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
++ +P ++ +N +I+ ++ G + LG+F + + IQPD T + LS C R
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIR- 260
Query: 369 FDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
L E +VFR ++ PDL + L+ K + M G PD S
Sbjct: 261 -GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
+ VLL A +G I EA+ V+ + +A ++V++ ++G+Y +F +
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 484 VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ 543
D Y + I G + T + M E ++P+ T ++F K +
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 544 KVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA-KALHAL 601
++L+ M + I S + + + ++ Y M E+G P+ + H+L
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 149/348 (42%), Gaps = 15/348 (4%)
Query: 202 KRMLRMHYY--------PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
+R LR+ Y PN + + +++ + L + ++ M G+ SV +T
Sbjct: 122 QRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTA 181
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA-SNLFNHMRSA 312
LI+ + + G + + +LL M + SP+++TY T+I A + LF MR
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF--- 369
G PD+V +N L+ + G +A VFR+++ I PD T + + + R
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 370 -DLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
DLL E A PD+ N LL K+G +A + M G P+ +++VLL
Sbjct: 302 CDLLGEMASGGSL--PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
+ +G+ + +++ S+ + DA + ++I + G + T+F V
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTF 536
D Y I A + G DA M N + P++ ++ F
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 171/410 (41%), Gaps = 54/410 (13%)
Query: 86 LTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAG----MHAMFFQAYHQMQSYG 141
L R+++ I L++ G + ++ S LL +L + +HAMF + +S+G
Sbjct: 132 LAGRYESSMRIFLRIPDFG--VKRSVRSLNTLLNVLIQNQRFDLVHAMF---KNSKESFG 186
Query: 142 FVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXX 201
PN F NL + A + ++ A V +I
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIP---------------------------- 218
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
M PN T+ ++L + + A ++L M+ G +T+L+ +C+L
Sbjct: 219 ----SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G A ++ +M PN VTY +I+A + + +A N+F+ M PD L
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPE 374
+ID + + +A G++R + K N PD L++ + +C+ ++FD +
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK 394
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
++ P L+ N L++ + + G ++A +D M E P+ +++ VL+ L
Sbjct: 395 GSI------PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
G + E V+V + + ++ L K GK A + AV+
Sbjct: 449 GNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVM 498
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 34/312 (10%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
GI ++ +L+ C+ ++ A K+L + G PN+VTYTT++ Y+ +
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
A + M G PD + VL+D + K GR +A V + K I+P+ T +
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 362 MICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDK 421
+C+ + K+G +A +D M+E F PD
Sbjct: 305 ALCKEK------------------------------KSG---EARNMFDEMLERSFMPDS 331
Query: 422 YSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ 481
++ ALC K+ EA ++R + ++ D + + +I L K G+ A +F +
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 482 AVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKD 541
P + Y I + G +A +D M E KPNA T N+++ K +
Sbjct: 392 FEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 542 LQKVNQMLKEMI 553
+++ ++L+EM+
Sbjct: 451 VKEGVRVLEEML 462
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 143/329 (43%), Gaps = 14/329 (4%)
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC---HSKAG 332
H G + N TY +++ + +L +R++ + P N+ ID + AG
Sbjct: 76 HPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS-YPPIKCGENLFIDLLRNYGLAG 134
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY------IDPDL 386
R++ ++ +F + ++ +L + L+++ Q++ FDL+ +F+ I P++
Sbjct: 135 RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLV---HAMFKNSKESFGITPNI 191
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
CN L+ L K A + D + +G P+ ++ +L A G + A +V
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
+ DA +TV++ K G++ AATV + + V Y V I AL + +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN 566
+ +A +D+M E P++ C ++ ++ + + + ++M+ + +
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGLLPA 595
L ++ C+ L E E G +P+
Sbjct: 372 LIHWLCKEGRVTEARKLFDEF-EKGSIPS 399
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 197/486 (40%), Gaps = 82/486 (16%)
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
F L++ +L +++Q +++S G +++ + + A+ ++G A+ F +++
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 174 P----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
P+ FT+++ L + ML+ + PN TF L++ +K
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
+A ++ M GI + +TILI CQ G D A KL M +G P+ V + L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
+ + + R+ +A L G L ++ LID +A R+ A ++ ++ K+NI
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 350 QPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFY 409
+ PD++ L+ L KAG DA +
Sbjct: 335 K---------------------------------PDIILYTILIQGLSKAGKIEDALKLL 361
Query: 410 DLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET--DARIHTVIIVELI 467
M G +PD Y + ++ ALC G + E + MS E+ DA HT++
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE--MSETESFPDACTHTIL----- 414
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
IC++ R+G +A + +++++G P+
Sbjct: 415 ------------------------------ICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEM-IGSRIELSDRNFLNLCNFPCRS-DAYYSTSNLLA 585
T N ++ K +L++ +L +M +G L FL L + RS D + ++L
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKMEVGRPASL----FLRLSHSGNRSFDTMVESGSILK 500
Query: 586 EMREMG 591
R++
Sbjct: 501 AYRDLA 506
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 190/475 (40%), Gaps = 65/475 (13%)
Query: 61 FFWSSQRRRDHQSVTVDH-----MVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
+W + V+VD ++ ++ K +++ +++ C P+ F
Sbjct: 110 LYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVES-FGRMKEFDC----RPDVFT 164
Query: 116 --LLLRILWRAGMHAMF-FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++LR++ R + M F Y++M PN + + MD ++ G A +F +
Sbjct: 165 YNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224
Query: 173 Q----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
PN T+ I + L + M YP++ ++LL+ F K+
Sbjct: 225 TGRGISPNRVTYTILISGLCQRGSADDARKLFYE-MQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
++EA++LL L G + ++ LI + A +L NML P+++ YT
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LI+ ++ ++ DA L + M S G +PD +N +I G ++ + +S+
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPS 403
PD T T + +C++ L+ E +F I+ P + NAL+ L K+G
Sbjct: 404 SFPDACTHTILICSMCRN---GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 404 DAA-----------------------EFYDLMIE----------------LGFAPDKYSF 424
+A +D M+E G +PD S+
Sbjct: 461 EARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSY 520
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVF 479
VL++ C AG I A+K+ + D+ + +I L + G+ A +F
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 3/299 (1%)
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
++S G + D + VLI ++K G + A+ F + + + +PD +T L ++ +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 366 SRMFDLLPEPA---LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+F +L ++ P+L L+ L K G SDA + +D M G +P++
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
++ +L+S LC G +A K++ S D+ H ++ K G+ + A + +
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
+ L Y+ I L R+ R A Y M + +KP+ +++ K +
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 543 QKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHAL 601
+ ++L M I + + C +L EM E P H +
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 22/345 (6%)
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLH----LALTVF 169
+ +L++ L +AG + M S G P+T+ N + A G L L L +
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 170 QQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
+ P+ T I + + + + + P+ TF++L++ K L
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTE-IEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKH-------CQLGILDVANKLLQNMLHTGCSPN 282
EA LL M V +++ L H + G + A + L + TG SP+
Sbjct: 460 KEARLLLHKMEV---GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPD 516
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
+V+Y LI + + + A L N ++ G +PD V +N LI+ + GR ++A +F
Sbjct: 517 IVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF- 575
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
+K + + P S ++ C+ R +L L +Y+ + + + +
Sbjct: 576 -YAKDDFRHSPAVYRSLMTWSCRKR--KVLVAFNLWMKYLKKISCLDDETANEIEQCFKE 632
Query: 403 SDAAEFYDLMIELGFAPDKYS---FAVLLSALCAAGKIYEAVKVY 444
+ +IEL D+ + + + L LC +G+ +EA+ V+
Sbjct: 633 GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVF 677
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 206/492 (41%), Gaps = 15/492 (3%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
S+LLL +L + M + + +++ G P++ + L +D + + + VF I
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 173 QPPNF----FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
+F F + + + RM YP+ ++ L++ K
Sbjct: 171 LESDFRPSKFMYGKAI-QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+ +A QL M+ + S+ + LI +C+ G + + K+ + M P+++T+ T
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
L+K ++ V DA N+ M+ G PD +++L D +S + + ALGV+ +
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
++ + YT + L+ +C+ + E + + + P+ V N ++ + G A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAAGKI----YEAVKVYRGGVMSSQETDARIHTVI 462
+ M + G PD ++ L+ C G++ E K+ GV S ET + ++
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET----YNIL 465
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
I + ++ + K+ + V+Y I L + + +A M++ G+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSN 582
P NM++ + ++ + KEM+ IEL+ + L + + +
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 583 LLAEMREMGLLP 594
LL E+ GL P
Sbjct: 586 LLLEISRKGLKP 597
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 146/362 (40%), Gaps = 11/362 (3%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNX 190
M+ G P+ A N + +G + A +++ P+ T++I L
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI-LIGGYGR 471
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
K M PN ++ +L+N K LLEA + M G+ V +
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+ +LI C G ++ A + + ML G N+VTY TLI + ++++A +L +
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSW--LSMICQSRM 368
G PD+ +N LI + AG Q + ++ + + I+P TL ++ L +C
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP---TLKTYHLLISLCTKEG 648
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
+ L E + PDL+ N +L G A MIE DK ++ L+
Sbjct: 649 IE-LTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
GK+ E + E +A + +I+ + Y+ A +++ + +
Sbjct: 708 LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Query: 489 LD 490
LD
Sbjct: 768 LD 769
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 166/430 (38%), Gaps = 42/430 (9%)
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP- 174
+LL L + G + + + G VPN N +D + R G+L A + ++
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 175 ---PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
P+ ++ + K L+ P+ T++ L+ + + +
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDK 477
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
+ +L M G +V + LI+ C+ L A + ++M G SP V Y LI
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
++ DA M G +LV +N LID S G+ +A + +S++ ++P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
D VF Y N+L+S AG+ Y+
Sbjct: 598 D-------------------------VFTY--------NSLISGYGFAGNVQRCIALYEE 624
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M G P ++ +L+S LC I +++ G MS + D ++ ++ G
Sbjct: 625 MKRSGIKPTLKTYHLLIS-LCTKEGIELTERLF--GEMSLK-PDLLVYNGVLHCYAVHGD 680
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
A + KQ + + LD Y I L+ G+ + + D+M ++P A T N+
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 532 MLFTFYKEKD 541
++ + KD
Sbjct: 741 IVKGHCEVKD 750
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 40/360 (11%)
Query: 133 AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXX 192
+ QM+ YGF+P + N +M + G + +AL +++
Sbjct: 190 TFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE--------------------- 228
Query: 193 XXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
M R PN T + +++ + + L + +LL M LG + + +
Sbjct: 229 -----------MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
LI HC+ G+L A KL M +G PNVVT+ TLI + + ++ +AS +F M++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
P+ V +N LI+ +S+ G H+ A + + IQ D T + + +C+
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK---T 394
Query: 373 PEPALVFRYIDPD-LVFCNALLSYLVKA----GHPSDAAEFYDLMIELGFAPDKYSFAVL 427
+ A + +D + LV ++ S L+ + E Y MI G P++ +F +L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY 487
+SA C A +V R V S D+R + L GK + + ++ +K+
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 11/348 (3%)
Query: 262 GILDVANKLLQNMLHT--GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
G +D+ K+ +L++ C + +L K + + +A++ F M+ G P +
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD-----LLPE 374
N + GR AL +R + + I P+PYTL +S C+S D L
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
L FR D V N L++ + G S A + ++M + G P+ +F L+ C A
Sbjct: 265 ERLGFRATD---VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
K+ EA KV+ + + + +I + G + MA ++ V D + Y
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
I L + +T A F ++ + L PN+ T + ++ K+ + ++ K MI
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEM-REMGLLPAKALHAL 601
S +++ F L + CR++ + S +L EM R L ++ +H +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 130/359 (36%), Gaps = 43/359 (11%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
F SL F + A M G +V + G +D+A + + M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
SPN T ++ Y S ++ L M G V +N LI H + G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----IDPDLVFCN 390
AL + + K +QP+ T + + C++ L E + VF + P+ V N
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK---LQEASKVFGEMKAVNVAPNTVTYN 347
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
L++ + G A FY+ M+ G D ++ L+ LC K +A +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ-------- 399
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ EL K ++T A +G C + R
Sbjct: 400 -----------FVKELDKENLVPNSSTF-------------SALIMGQCVRKNADR---G 432
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
Y M +G PN T NM++ F + +D +Q+L+EM+ I L R +CN
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 40/360 (11%)
Query: 133 AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXX 192
+ QM+ YGF+P + N +M + G + +AL +++
Sbjct: 190 TFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE--------------------- 228
Query: 193 XXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
M R PN T + +++ + + L + +LL M LG + + +
Sbjct: 229 -----------MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
LI HC+ G+L A KL M +G PNVVT+ TLI + + ++ +AS +F M++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
P+ V +N LI+ +S+ G H+ A + + IQ D T + + +C+
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK---T 394
Query: 373 PEPALVFRYIDPD-LVFCNALLSYLVKA----GHPSDAAEFYDLMIELGFAPDKYSFAVL 427
+ A + +D + LV ++ S L+ + E Y MI G P++ +F +L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY 487
+SA C A +V R V S D+R + L GK + + ++ +K+
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 11/348 (3%)
Query: 262 GILDVANKLLQNMLHT--GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
G +D+ K+ +L++ C + +L K + + +A++ F M+ G P +
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD-----LLPE 374
N + GR AL +R + + I P+PYTL +S C+S D L
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
L FR D V N L++ + G S A + ++M + G P+ +F L+ C A
Sbjct: 265 ERLGFRATD---VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
K+ EA KV+ + + + +I + G + MA ++ V D + Y
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
I L + +T A F ++ + L PN+ T + ++ K+ + ++ K MI
Sbjct: 382 NALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIR 441
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEM-REMGLLPAKALHAL 601
S +++ F L + CR++ + S +L EM R L ++ +H +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 130/359 (36%), Gaps = 43/359 (11%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
F SL F + A M G +V + G +D+A + + M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
SPN T ++ Y S ++ L M G V +N LI H + G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----IDPDLVFCN 390
AL + + K +QP+ T + + C++ L E + VF + P+ V N
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK---LQEASKVFGEMKAVNVAPNTVTYN 347
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
L++ + G A FY+ M+ G D ++ L+ LC K +A +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ-------- 399
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ EL K ++T A +G C + R
Sbjct: 400 -----------FVKELDKENLVPNSSTF-------------SALIMGQCVRKNADR---G 432
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
Y M +G PN T NM++ F + +D +Q+L+EM+ I L R +CN
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 197/458 (43%), Gaps = 30/458 (6%)
Query: 83 LGRLTR--RHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSY 140
+G L R R + +AI ++ +G L P ++ + L + + M++
Sbjct: 51 IGVLVRESRFELAEAIYWDMKPMGFSLI--PFTYSRFISGLCKVKKFDLIDALLSDMETL 108
Query: 141 GFVPNTFARNLFMDAHFRIGNLHLALTVF----QQIQPPNFFTFDITLFHLSNXXXXXXX 196
GF+P+ +A N+++D R + A+ F Q+ + P+ ++ I + L
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 197 XXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLG-IQFSVNVWTILI 255
M+R P+ +L+ + AY+++ + ++ S V+ LI
Sbjct: 169 VEIWNA-MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Query: 256 HKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT 315
C+ G ++ A L M GC P++VTY L+ Y ++N + A + M +G
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287
Query: 316 PDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP----DPYTLTSWLSMICQS----- 366
D +N L+ H + H D F + ++P D + ++ + C++
Sbjct: 288 LDAYSYNQLLKRHCRVS-HPDKCYNFMV---KEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 367 --RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
R+F+ + + +V ++V +L+ ++ G+ S A + D M ELG +PD+ +
Sbjct: 344 AYRLFEEMRQKGMVM-----NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
+L LC +G + +A V+ + DA + +I L ++G+ A +F+
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
++ D + + I L+R + A +DQM + G
Sbjct: 459 KECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 11/297 (3%)
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
+ Y + I ++S + +A +F+ MR + + +N I + R + A ++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFDLLP---EPALVFRYIDPDLVFCNALLSYLVKAG 400
+ P+T + ++S +C+ + FDL+ +I PD+ N L L +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFI-PDIWAFNVYLDLLCREN 128
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT 460
A + + M++ G PD S+ +L++ L AGK+ +AV+++ + S D +
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 461 VIIVELIKAGK----YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
++V L A K Y M A K A V+ L V Y I ++GR A
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVK---LSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR 573
M + G +P+ T N++L +Y L++ ++ EM+ S I+L ++ L CR
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 43/270 (15%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL-- 261
M ++ P+ T++ LLN ++ + L A ++ MV GIQ + L+ +HC++
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 262 ---------------GILDV------------------ANKLLQNMLHTGCSPNVVTYTT 288
G DV A +L + M G NVVTYT+
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
LIKA++ + A L + M G +PD + + ++D K+G A GVF + +
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPS 403
I PD + S +S +C+S + E +F + PD + ++ L++ S
Sbjct: 426 ITPDAISYNSLISGLCRS---GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLS 482
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
A + +D M++ GF D+ L+ A C+
Sbjct: 483 AAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 148/382 (38%), Gaps = 38/382 (9%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
++ I C++ D+ + LL +M G P++ + + N+V A F M
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G PD+V + +LI+ +AG+ DA+ ++ ++ + + PD + + +C +R D
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 371 LLPE---PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVL 427
L E + + V NAL+S KAG A M ++G PD ++ VL
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDA-----------RI------------------ 458
L+ + A V V S + DA R+
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 459 ------HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
++ +I +A A +F++ + ++ V Y I A LR G + A
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 513 FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPC 572
DQM E GL P+ +L K ++ K + +MI I ++ +L + C
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 573 RSDAYYSTSNLLAEMREMGLLP 594
RS L +M+ P
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCP 463
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 193/476 (40%), Gaps = 43/476 (9%)
Query: 61 FFWSSQRRRDHQSVTV-DHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLR 119
F W++++ S V MV +L ++ R+ + ++ ++ L + P F++L+R
Sbjct: 118 FLWATKQPGYFHSYEVCKSMVMILSKM-RQFGAVWGLIEEMRKTNPELIE-PELFVVLMR 175
Query: 120 ILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFT 179
A M + +M YG P+ + +DA + G++ A VF+
Sbjct: 176 RFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED-------- 227
Query: 180 FDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
+R + PN F SLL + + L+EA ++L M
Sbjct: 228 -------------------------MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM 262
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES-NR 298
G++ + V+T L+ + G + A L+ +M G PNV YT LI+A + R
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
+ +A +F M G D+V + LI K G V + K+ + P T
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 359 WLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
+ + F+ E + R PDL+ N ++ K G +A ++ M G
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 417 FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV--IIVELIKAGKYLM 474
+P +F ++++ + G + EA ++ V + + T+ ++ L++ K M
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEM 502
Query: 475 AATVFK--QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
A V+ L+ A+ + I AL G +AC++ M E L P +T
Sbjct: 503 AKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNT 558
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 143/347 (41%), Gaps = 43/347 (12%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
F L+ F + + +A ++L M G++ V+ L+ C+ G + A+K+ ++M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
PN+ +T+L+ + ++ +A + M+ AG PD+V++ L+ ++ AG+
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSY 395
DA +DL+ + + R +P++ L+
Sbjct: 289 DA-------------------------------YDLMND--MRKRGFEPNVNCYTVLIQA 315
Query: 396 LVKAGHPSDAA-EFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY----RGGVMS 450
L + D A + M G D ++ L+S C G I + V + GVM
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
SQ T + I+V K ++ + ++ R D + Y V I + G +A
Sbjct: 376 SQVT----YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+++M+ NGL P T +M+ F + L + KEM+ I
Sbjct: 432 VRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
I+P+L L+ A A E D M + G PD+Y F LL ALC G + EA
Sbjct: 165 IEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
KV+ + + R T ++ + GK + A V Q D V + +
Sbjct: 223 KVFE-DMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK-EKDLQKVNQMLKEMIGSRIELS 560
+G+ DA + M++ G +PN + +++ + EK + + ++ EM E
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAEV 620
+ L + C+ ++L +MR+ G++P++ + A +E++E C E+
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM--QIMVAHEKKEQFEECLEL 399
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 194/487 (39%), Gaps = 15/487 (3%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
S+ ++ +L +G + Y +M+ G P+ ++ + M + + H AL + +
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 173 QPPNF------FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM 226
+ + F+ N +ML +TF+ LL K
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG---KMLASGVSLCLSTFNKLLRVLCKK 229
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
+ E +LL ++ G+ ++ + + I CQ G LD A +++ ++ G P+V+TY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
LI ++++ +A M + G PD +N LI + K G Q A +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 347 QNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
PD +T S + +C +R L E + + I P+++ N L+ L G
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEA--LGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
+AA+ + M E G P+ +F +L++ LC G + +A + + + D ++
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
I K A + + D Y + L ++ + D Y M E G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSN 582
PN T N++L + + + L + +L+EM + F L + C++
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 583 LLAEMRE 589
L +M E
Sbjct: 588 LFRKMEE 594
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 183/481 (38%), Gaps = 11/481 (2%)
Query: 122 WRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNF 177
R G + +M Y P F+ N M G A V+ +++ P+
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 178 FTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLG 237
++F I + M N + +++ F++ + E Y+L G
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLL-NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 238 LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESN 297
M+ G+ ++ + L+ C+ G + KLL ++ G PN+ TY I+ +
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 298 RVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLT 357
+ A + + G PD++ +N LI K + Q+A + + ++PD YT
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 358 SWLSMICQSRMFDLLPEPA--LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
+ ++ C+ M L VF PD +L+ L G + A ++ +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 416 GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT--VIIVELIKAGKYL 473
G P+ + L+ L G I EA ++ MS + + T +++ L K G
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQL--ANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 474 MAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
A + K + + Y D + + I + +A D M +NG+ P+ +T N +L
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 534 FTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLL 593
K + V + K M+ + F L CR LL EM+ +
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 594 P 594
P
Sbjct: 564 P 564
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 173/442 (39%), Gaps = 57/442 (12%)
Query: 103 IGCILTKNPNSFLLLLR-ILWRAGMHAMFFQA---YHQMQSYGFVPNTFARNLFMDAHFR 158
+GC++ + P ++ +++ ++ F +A +M + G P+++ N + + +
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 159 IGNLHLAL-----TVFQQIQPPNFFTFDIT--LFHLSNXXXXXXXXXXXXKRMLRMHYYP 211
G + LA VF P F + L H + ++ P
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK----P 389
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N +++L+ +LEA QL M G+ V + IL++ C++G + A+ L+
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+ M+ G P++ T+ LI Y ++ +A + + M G PD+ +N L++ K
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNA 391
+ +D + ++++ ++ P+ +T L +C+ R D
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD--------------------- 548
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG----- 446
+A + M PD +F L+ C G + A ++R
Sbjct: 549 ------------EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
V SS T + +II + MA +F++ V R D Y + + ++G
Sbjct: 597 KVSSSTPT----YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 507 TPDACTFYDQMKENGLKPNAHT 528
F +M ENG P+ T
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTT 674
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 146/393 (37%), Gaps = 57/393 (14%)
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
V+ + + + G + A + + M C P V +Y ++ ++S A ++
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ-------------------NI 349
MR G TPD+ + + + K R AL + ++S Q N
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 350 QPDPY----------------TLTSWLSMICQ-------SRMFDLLPEPALVFRYIDPDL 386
+ + Y T L ++C+ ++ D ++ R + P+L
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD-----KVIKRGVLPNL 251
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
N + L + G A +IE G PD ++ L+ LC K EA +VY G
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVYLG 310
Query: 447 GVMSSQ-ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
+++ E D+ + +I K G +A + AV + D Y I L G
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI--GSRIELSDRN 563
T A +++ G+KPN N ++ + + + Q+ EM G E+ N
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 564 FL--NLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
L LC C SDA L+ M G P
Sbjct: 431 ILVNGLCKMGCVSDA----DGLVKVMISKGYFP 459
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/529 (20%), Positives = 209/529 (39%), Gaps = 19/529 (3%)
Query: 96 ILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDA 155
+L Q + + C++ +FL+ + G M + Q++ G N + + + A
Sbjct: 168 VLFQSKRLDCVVDIKACNFLM--NRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKA 225
Query: 156 HFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANT 215
R GNL A + I+ + F + + L + + R Y +
Sbjct: 226 LCRKGNLEEAAMLL--IENESVFGYKTFINGLCVTGETEKAVALILELIDRK--YLAGDD 281
Query: 216 FHSLLN----AFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
++L F + A ++ M +G V +I ++C+ L A L
Sbjct: 282 LRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFL 341
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
ML G N V + +++ Y + + +A F R D V +NV D SK
Sbjct: 342 DKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKL 401
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLP-EPALVFRYIDPDLVFC 389
GR ++A + + + + I PD T+ + C Q ++ D L ++ + PDL+
Sbjct: 402 GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITY 461
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
N L+S L + GH + E Y+ M G P+ + +V++ LC A K+ EA +
Sbjct: 462 NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ 521
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
E A + +AG ++ +K V +YPL Y +L G
Sbjct: 522 KCPENKAS----FVKGYCEAG---LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEK 574
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
A +M ++P C M+ F K ++++ + M+ + + + +
Sbjct: 575 AHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Query: 570 FPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCA 618
CR + +L +M++ G+ P + + D+Y + E +E C+
Sbjct: 635 TYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCS 683
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 165/409 (40%), Gaps = 26/409 (6%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+ML N +L + KMD LEA + + I + + +LG
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
++ A +LLQ M G P+V+ YTTLI Y +V DA +L + M G +PDL+ +N
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
VL+ ++ G ++ L ++ + + +P+ T + + +C +R + E F +
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK---VKEAEDFFSSL 519
Query: 383 DPDLVFCNALLSYLVK----AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ C + VK AG A Y + L + K + L +LC G +
Sbjct: 520 EQK---CPENKASFVKGYCEAGLSKKA---YKAFVRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+A V + E + +I K A +F V R D Y + I
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK-------------EKDLQKV 545
R A + ++ MK+ G+KP+ T ++L + K E +K
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKA 693
Query: 546 NQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+++L+E + I L + L + C+ + + L M + GL P
Sbjct: 694 SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 155/386 (40%), Gaps = 53/386 (13%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M+ + + ++ +A K+ + EA++LL M GI V +T LI +C
Sbjct: 377 KEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQ 436
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G + A L+ M+ G SP+++TY L+ + + ++ M++ G P+ V
Sbjct: 437 GKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTN 496
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPE 374
+V+I+ A + ++A F SL Q P S++ C++ + F L
Sbjct: 497 SVIIEGLCFARKVKEAEDFFSSLE----QKCPENKASFVKGYCEAGLSKKAYKAFVRLEY 552
Query: 375 PALVFRYI---------------------------DPDLVFCNALLSYLVKAGHPSDAAE 407
P YI +P C ++ K + +A
Sbjct: 553 PLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQV 612
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
+D M+E G PD +++ +++ C ++ +A ++ + D +TV++ +
Sbjct: 613 LFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYL 672
Query: 468 K--------------AGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
K GK A+ V ++ LD V Y V I + A
Sbjct: 673 KLDPEHHETCSVQGEVGKR-KASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAEL 731
Query: 514 YDQMKENGLKPNAHTCNMMLFTFYKE 539
+D+M ++GL+P+ ++ +++++
Sbjct: 732 FDRMIDSGLEPDMVAYTTLISSYFRK 757
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 126/315 (40%), Gaps = 44/315 (13%)
Query: 91 KTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNT---- 146
K + A+ L E IG ++ + ++ +L+ L R G + Y +M++ G PN
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNS 497
Query: 147 -------FARNL--------------------FMDAHFRIGNLHLALTVFQQIQPPNFFT 179
FAR + F+ + G A F +++ P +
Sbjct: 498 VIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKS 557
Query: 180 FDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
I LF K+M P + ++ AF K++ + EA L M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYM----- 294
V G+ + +TI+IH +C+L L A L ++M G P+VVTYT L+ Y+
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 295 --ESNRVT------DASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
E+ V AS + +AG D+V + VLID K + A +F +
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 347 QNIQPDPYTLTSWLS 361
++PD T+ +S
Sbjct: 738 SGLEPDMVAYTTLIS 752
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 18/218 (8%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNX 190
+M +Y P + A ++ N+ A +F + P+ FT+ I + H
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI-MIHTYCR 638
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD-------------ALLEAYQLLG 237
+ M + P+ T+ LL+ + K+D +A ++L
Sbjct: 639 LNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLR 698
Query: 238 LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESN 297
GI V +T+LI + C++ L+ A +L M+ +G P++V YTTLI +Y
Sbjct: 699 EFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Query: 298 RVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
+ A L + + P + KA R Q
Sbjct: 759 YIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQ 796
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 195/483 (40%), Gaps = 43/483 (8%)
Query: 57 ALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLE--SIGCILTKNPNSF 114
L F W S + H+ + M+ LGR R + L +E S GC+ ++ F
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGR-ARNLNVARNFLFSIERRSNGCVKLQD-RYF 141
Query: 115 LLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ- 173
L+R AG+ + + M+ G P+ N + + G +A +F +++
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 174 ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
P+ +TF+ TL + K M H P+ T++++++ + +
Sbjct: 202 TYGVTPDSYTFN-TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 230 LEAYQLLGLMVVLGIQFSVNV--WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
A+ +L M+ NV +T L+ +C +D A + +ML G PN VTY
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHT--PDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
TLIK E++R + ++ A T PD +N+LI H AG A+ VF+ +
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFD--------LLPEPALVFR-YIDPDLVFCNALLSYL 396
+ PD + + + +C FD L + L+ + P N + YL
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
G A + + +++ G D S+ L++ C GK A ++ + D
Sbjct: 441 CANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
+ ++I L+K G+ L+A ++ +LRS P A TF+
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQR-------------------MLRSSYLPVATTFHSV 540
Query: 517 MKE 519
+ E
Sbjct: 541 LAE 543
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 26/328 (7%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
F+SL+ ++ E+ +L M +GI SV + L+ + G +A+ L M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 276 HT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
T G +P+ T+ TLI + +++ V +A +F M PD+V +N +ID +AG+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 335 QDALGVFRSLSKQ--NIQPDPYTLTSWLSMICQSRMFDLLPEPALVF-----RYIDPDLV 387
+ A V + K+ ++ P+ + T+ + C + D E LVF R + P+ V
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEID---EAVLVFHDMLSRGLKPNAV 317
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIE-----LGFAPDKYSFAVLLSALCAAGKIYEAVK 442
N L+ L +A H D E D++I FAPD +F +L+ A C AG + A+K
Sbjct: 318 TYNTLIKGLSEA-HRYD--EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMK 374
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN-------VAYA 495
V++ + D+ ++V+I L ++ A T+F + ++ L AY
Sbjct: 375 VFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYN 434
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLK 523
L +G+T A + Q+ + G++
Sbjct: 435 PMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 117/316 (37%), Gaps = 73/316 (23%)
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
+N LI + AG Q+++ +F+++ + I P T
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTF------------------------ 176
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL-GFAPDKYSFAVLLSALCAAGKIYE 439
N+LLS L+K G A + +D M G PD Y+F L++ C + E
Sbjct: 177 ---------NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL--DNVAYAV- 496
A ++++ + D + II L +AGK +A V + + + + V+Y
Sbjct: 228 AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
Query: 497 --GICA-------------LLRSGRTPDACTF------------YDQMKE---------N 520
G C +L G P+A T+ YD++K+
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFT 347
Query: 521 GLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYST 580
P+A T N+++ L ++ +EM+ ++ ++ L C + +
Sbjct: 348 TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 581 SNLLAEMREMGLLPAK 596
L E+ E +L K
Sbjct: 408 ETLFNELFEKEVLLGK 423
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 193/432 (44%), Gaps = 19/432 (4%)
Query: 148 ARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
+R M+ G H A TVF+ + P+ ++ TL
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISY-TTLLAAMTVQKQYGSISSIVSE 105
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
+ + ++ F++++NAF + + +A Q L M LG+ + + + LI + G
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 264 LDVANKLLQNMLHTG---CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
+ +++LL ML G PN+ T+ L++A+ + +V +A + M G PD V
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 321 WNVLIDCHSKAGR--HQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPAL 377
+N + C+ + G ++ V + + K+ +P+ T + C + R+ D L
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL---RF 282
Query: 378 VFRY----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
V R ++ +LV N+L++ V+ E LM E D +++ +++A +
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 434 AGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
AG + +A +V++ V + + DA ++++ ++A + A + + +V P + V
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP-NVVI 401
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
+ I +G DA +++M + G+ PN T +++ + + K K ++L+ M
Sbjct: 402 FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 461
Query: 554 GSRIELSDRNFL 565
G ++ + FL
Sbjct: 462 GCGVKPENSTFL 473
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 134/338 (39%), Gaps = 7/338 (2%)
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
V + T L+ +E R +A +F + GH P L+ + L+ + ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVFCNALLSYLVKAG 400
+ + + D + ++ +S + + L + ++P N L+ AG
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 401 HPSDAAEFYDLMIELG---FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
P ++E DLM+E G P+ +F VL+ A C K+ EA +V + D
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC--ALLRSGRTPDACTFYD 515
+ I ++ G+ + A + + +V K GI R GR D F
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 516 QMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSD 575
+MKE ++ N N ++ F + D ++++L M ++ + + N +
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 576 AYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEK 613
+ + EM + G+ P +++ + Y + E K
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 382
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 131/309 (42%), Gaps = 14/309 (4%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFD-ITLFHLSNXXXXXXXXX 198
PN N+ + A + + A V ++++ P+ T++ I ++
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 199 XXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKH 258
K +++ PN T ++ + + + + + + M + ++ ++ V+ LI+
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 259 CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDL 318
++ D +++L M +V+TY+T++ A+ + + A+ +F M AG PD
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 319 VLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALV 378
+++L + +A + A + +L ++ +P+ T+ +S C + D + V
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMD---DAMRV 421
Query: 379 FRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
F + P++ L+ ++ P A E +M G P+ +F +L A
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRV 481
Query: 434 AGKIYEAVK 442
AG E+ K
Sbjct: 482 AGLTDESNK 490
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M++ P+A+ + L + + +A +LL ++V + +V ++T +I C
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSN 412
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G +D A ++ M G SPN+ T+ TL+ Y+E + A + MR G P+ +
Sbjct: 413 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+L + AG ++ +L ++I+
Sbjct: 473 LLLAEAWRVAGLTDESNKAINALKCKDIE 501
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 166/383 (43%), Gaps = 9/383 (2%)
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH 276
++L+ +F K+ + E + M GI+ ++ + L++ +D A ++ + M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
P++VTY T+IK Y ++ + A M + GH D + + +I
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-----DPDLVFCNA 391
+ +++ + ++ IQ P+ + + +C+ L E VF + P++
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKE---GKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
L+ K+G DA MI+ GF PD +++V+++ LC G++ EA+ +
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 452 QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
++ ++ +I L KAG+ A +F++ + D+ Y I A + + +A
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 512 TFYDQMKEN-GLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNF 570
+ +M+E G +T ++L +KE ++ ++ MI I + F L
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547
Query: 571 PCRSDAYYSTSNLLAEMREMGLL 593
C S +L E+ MG++
Sbjct: 548 LCLSGKVARACKILDELAPMGVI 570
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 112/510 (21%), Positives = 191/510 (37%), Gaps = 87/510 (17%)
Query: 46 KRENVRSSDLIALSCFFWS-SQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIG 104
K + +R IA S F WS Q++ H +V VL L + ++ + +++
Sbjct: 124 KSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLA-LAKDVDRIRFVSSEIKKFE 182
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
+T + + L++ + GM + +M+ G P + N M+ +
Sbjct: 183 FPMTVSAAN--ALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 165 ALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
A VF+ ++ P+ T++ T+ + M + + T+ +++
Sbjct: 241 AERVFEVMESGRIKPDIVTYN-TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
A + L M GIQ + ++++I C+ G L+ + +NM+ G
Sbjct: 300 QACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSK 359
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV----------------- 323
PNV YT LI Y +S V DA L + M G PD+V ++V
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY 419
Query: 324 ------------------LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
LID KAGR +A +F +S++ D Y + + +
Sbjct: 420 FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Query: 366 SRMFDLLPEPALVFRYI------DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAP 419
R D E +F+ + D + LLS + K +A + +D+MI+ G P
Sbjct: 480 HRKVD---EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Query: 420 DKYSFAVL----------------------------------LSALCAAGKIYEAVKVYR 445
F L ++ LC AG+I EA K+
Sbjct: 537 TAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLAD 596
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMA 475
G +E RI TV+I L K GK +A
Sbjct: 597 GITERGREVPGRIRTVMINALRKVGKADLA 626
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 164/357 (45%), Gaps = 12/357 (3%)
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
LR + PNA ++L + + A ++ + V V+ ++ + + G
Sbjct: 183 LRHWHSPNARMVAAILGVLGRWNQESLAVEIF-TRAEPTVGDRVQVYNAMMGVYSRSGKF 241
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD--ASNLFNHMRSAGHTPDLVLWN 322
A +L+ M GC P+++++ TLI A ++S +T A L + +R++G PD + +N
Sbjct: 242 SKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYN 301
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
L+ S+ A+ VF + QPD +T + +S+ + L E +F +
Sbjct: 302 TLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC---GLAAEAERLFMEL 358
Query: 383 D-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ PD V N+LL + + E Y M ++GF D+ ++ ++ G++
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 438 YEAVKVYRG-GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
A+++Y+ +S + DA +TV+I L KA + + AA + + + Y+
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
IC ++G+ +A + M +G KP+ ++ML + + +K + ++MI
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 172/402 (42%), Gaps = 25/402 (6%)
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
+ ++ + +LL+ + EA Q+ + + G + S +V ++ +C+LG + A++
Sbjct: 678 FGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQ 737
Query: 270 LLQNM----LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
++ H CSP YT +I+AY + A ++ ++R +G TPDL WN L+
Sbjct: 738 VVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLM 794
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPALVFRYIDP 384
+++ G ++ A +F ++ + P ++ L +C R+ +L +V D
Sbjct: 795 SAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELY---VVVEELQDM 851
Query: 385 DLVFCNA----LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
+ +L +AG+ + + Y M G+ P + +++ LC ++ +A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIK----AGKYLMAATVFKQAVVRKYPLDNVAYAV 496
+ V +E + ++ I ++K Y V+++ D Y
Sbjct: 912 EIM----VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNT 967
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
I R R + QM+ GL P T ++ F K+K L++ Q+ +E++
Sbjct: 968 LIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Query: 557 IELSDRNFL-NLCNFPCRSDAYYSTSNLLAEMREMGLLPAKA 597
++L DR+F + S + LL M+ G+ P A
Sbjct: 1028 LKL-DRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLA 1068
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 14/350 (4%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL--DVANKLLQN 273
+++++ + + +A +L+ M G + + LI+ + G L ++A +LL
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGR 333
+ ++G P+ +TY TL+ A + + A +F M + PDL +N +I + + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 334 HQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVF 388
+A +F L + PD T S L + R + + E V++ + D +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE---VYQQMQKMGFGKDEMT 404
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIEL-GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
N ++ K G A + Y M L G PD ++ VL+ +L A + EA +
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+ + + ++ +I KAGK A F + DN+AY+V + LLR T
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK---DLQKVNQMLKEMIG 554
A Y M +G P+ +M+ KE D+QK + ++E+ G
Sbjct: 525 RKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/565 (20%), Positives = 219/565 (38%), Gaps = 85/565 (15%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPN 176
++ + R G+ A + + +++ GF P+ N + A R N V+QQ+Q
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 177 FFTFDIT---LFHLSNXXXXXXXXXXXXKRMLRMH-YYPNANTFHSLLNAFFKMDALLEA 232
F ++T + H+ K M + P+A T+ L+++ K + +EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
L+ M+ +GI+ ++ ++ LI + + G + A ML +G P+ + Y+ ++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ N A L+ M S GHTP L+ ++I K R D R + ++ +
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM-EELCGMN 576
Query: 353 PYTLTSWLSMICQSRMFDLLPEP---ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFY 409
P ++ S++ + FDL A+ Y + + L SY +G S+A E
Sbjct: 577 PLEIS---SVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSY-SSSGRHSEAFELL 632
Query: 410 DLMIE----------------------LGFAPDKY---------------SFAVLLSALC 432
+ + E L A D+Y + LL
Sbjct: 633 EFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCV 692
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY----- 487
A EA +V+ +S E + ++V K G A V QA + +
Sbjct: 693 ANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACS 752
Query: 488 PL-DNVAYAVG-----------ICALLRSGRTPDACTF-------------------YDQ 516
P+ ++ A G + L +SGRTPD T+ ++
Sbjct: 753 PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT 812
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDA 576
M +G P + N++L + L+++ +++E+ ++S + L + + R+
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 577 YYSTSNLLAEMREMGLLPAKALHAL 601
+ + + M+ G LP L+ +
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRM 897
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 148/349 (42%), Gaps = 20/349 (5%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M+R P + + LL+A L E Y ++ + +G + S + +++ + G
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+ K+ +M G P + Y +I+ + RV DA + + M A +L +WN
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-- 381
++ ++ ++ + V++ + + ++PD T + + M C+ R PE +
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR----PEEGYLLMQQM 988
Query: 382 ----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+DP L +L+S K A + ++ ++ G D+ + ++ +G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 438 YEAVKVYR----GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
+A K+ + G+ + T A +H +++V +G A V + L +
Sbjct: 1049 SKAEKLLQMMKNAGI---EPTLATMH-LLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP 1104
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPNAH--TCNMMLFTFYKEK 540
Y+ I A LRS +MK+ GL+P+ TC + +F KEK
Sbjct: 1105 YSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEK 1153
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/504 (19%), Positives = 193/504 (38%), Gaps = 77/504 (15%)
Query: 57 ALSCFFWSSQRR-RDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
AL F W + R + V ++ VLGR + ++ ++G +
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVG----DRVQVYN 229
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNL--HLALTVFQQIQ 173
++ + R+G + + M+ G VP+ + N ++A + G L +LA+ + ++
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 174 ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
P+ T++ TL + + M P+ T++++++ + +
Sbjct: 290 NSGLRPDAITYN-TLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
EA +L + + G + L++ + + ++ Q M G + +TY T+
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 290 IKAYMESNRVTDASNLFNHMRS-AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
I Y + ++ A L+ M+ +G PD + + VLID KA R +A + +
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 349 IQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEF 408
I+P TL ++ ++IC KAG +A +
Sbjct: 469 IKP---TLQTYSALICG------------------------------YAKAGKREEAEDT 495
Query: 409 YDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG------------------GVMS 450
+ M+ G PD +++V+L L + +A +YR G+M
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 451 SQETDARIHTVIIVE-------------LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
+D T+ +E L+K + +AA K A+ Y L+N
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSI 615
Query: 498 ICALLRSGRTPDACTFYDQMKENG 521
+ + SGR +A + +KE+
Sbjct: 616 LGSYSSSGRHSEAFELLEFLKEHA 639
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 156/389 (40%), Gaps = 43/389 (11%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T++SL++A+ + A + M+ G +V IL+H C G L+ +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
++ + G + + ++ A+ + + + +++ M++AG+ P + L+ ++I+ K
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-----DPD 385
R +DA + + + N + + L W SM+ + + V++ I +PD
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVE---LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
N L+ + P + M LG P ++ L+SA K E
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF-GKQKCLE------ 1014
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
A +F++ + + LD Y + SG
Sbjct: 1015 ----------------------------QAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFL 565
A MK G++P T ++++ ++ + Q+ ++L + + +EL+ +
Sbjct: 1047 SDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYS 1106
Query: 566 NLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++ + RS Y S L EM++ GL P
Sbjct: 1107 SVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 127/291 (43%), Gaps = 15/291 (5%)
Query: 69 RDHQSVTVD------HMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILW 122
RD S TV+ H + V GRL + L ++ +L+ +G ++K+ S LL+L
Sbjct: 815 RDGPSPTVESINILLHALCVDGRL----EELYVVVEELQDMGFKISKS--SILLMLDAFA 868
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNF---FT 179
RAG + Y M++ G++P + ++ + + A + +++ NF
Sbjct: 869 RAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELA 928
Query: 180 FDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
++ + +R+ P+ T+++L+ + + E Y L+ M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRV 299
LG+ ++ + LI + L+ A +L + +L G + Y T++K +S
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 300 TDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+ A L M++AG P L ++L+ +S +G Q+A V +L ++
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 5/249 (2%)
Query: 112 NSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ 171
S +LL L G + ++Q GF + + L +DA R GN+ ++
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSS 882
Query: 172 IQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
++ + I L+ + + M+ N ++ N+ KM +E
Sbjct: 883 MKAAGYLP-TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIE 941
Query: 232 AY----QLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
Y Q+ + G++ + LI +C+ + L+Q M + G P + TY
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
+LI A+ + + A LF + S G D ++ ++ +G A + + +
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 348 NIQPDPYTL 356
I+P T+
Sbjct: 1062 GIEPTLATM 1070
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 6/314 (1%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N T+ L+ K + +A +L M GI+ V+V+T LI +C+ G + A L
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+ G SP+ TY LI + + A L N M+S G V++N LID + +
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNA 391
G +A ++ + ++ Q D +T + S C +R+ +FR ++ +
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIAS--CFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 392 ----LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
L+ K G+ +A + M G P+ ++ V++ A C GKI EA K+
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+ + D+ +T +I A A +F + ++ ++V Y V I L ++G++
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 508 PDACTFYDQMKENG 521
+A YD+MK G
Sbjct: 591 DEAFGLYDEMKRKG 604
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 161/377 (42%), Gaps = 19/377 (5%)
Query: 225 KMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVV 284
++D LE ++ MV G++ +V TI++ C+ G ++ + KL++ G P
Sbjct: 204 RIDLCLEIFRR---MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
TY T+I AY++ + + M+ G + V + +L++ K G+ DA +F +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 345 SKQNIQPDPYTLTSWLSMICQSR-------MFDLLPEPALVFRYIDPDLVFCNALLSYLV 397
++ I+ D + TS +S C+ +FD L E L P AL+ +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGL-----SPSSYTYGALIDGVC 375
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
K G A + M G + F L+ C G + EA +Y VM + A
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY--DVMEQKGFQAD 433
Query: 458 IHT--VIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYD 515
+ T I + +Y A + + L V+Y I + G +A +
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 516 QMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSD 575
+M G++PNA T N+M++ + K+ +++ ++ M + ++ + +L + C +D
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 576 AYYSTSNLLAEMREMGL 592
L +EM GL
Sbjct: 554 NVDEAMRLFSEMGLKGL 570
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 145/352 (41%), Gaps = 13/352 (3%)
Query: 88 RRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTF 147
R ++ +L ++ G + N ++ LL+ + + G + + + +M+ G +
Sbjct: 273 RDFSGVEGVLKVMKKDGVVY--NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 148 ARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
+ + R GN+ A +F ++ P+ +T+ L
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG-ALIDGVCKVGEMGAAEILMNE 389
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M F++L++ + + + EA + +M G Q V + +L
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
D A + L M+ G + V+YT LI Y + V +A LF M S G P+ + +NV
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALVF 379
+I + K G+ ++A + ++ + PD YT TS + C + D L E L
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL-- 567
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
+ +D + V ++S L KAG +A YD M G+ D + L+ ++
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 136/338 (40%), Gaps = 8/338 (2%)
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G+ + ++ M+ G S + + + A + R+ +F M +G +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
++++ + G + + + + S + I+P+ YT + ++ + R F + V +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEG---VLKV 284
Query: 382 IDPDLVFCNA-----LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+ D V N L+ VK G SDA + +D M E G D + + L+S C G
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
+ A ++ + + +I + K G+ A + + + + V +
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
I R G +A YD M++ G + + TCN + F + K + Q L M+
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 557 IELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
++LS ++ NL + C+ L EM G+ P
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 4/392 (1%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T+ S++ A K + +A +L M+ GI +V T LI HC+ L A L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
M G SPN VT++ LI+ + ++ + A + M G TP + + +I K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVF 388
+H++AL +F S + + + + LS +C+ D E + R I P++V
Sbjct: 422 GQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
N ++ + + A + ++E G P+ Y++++L+ A++V
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 449 MSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK-YPLDNVAYAVGICALLRSGRT 507
S+ E + ++ II L K G+ A + + K + ++Y I + G
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A Y++M NG+ PN T ++ K + + +M EM ++L + L
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLPAKALH 599
+ C+ S S L +E+ E GL P++ ++
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIY 692
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/490 (20%), Positives = 190/490 (38%), Gaps = 77/490 (15%)
Query: 110 NPNSFLLLLRILW--RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT 167
+PNS + I W + G + Y +M+ G P+ F + + + AL
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 168 VFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTF--HSLLNAFFK 225
+F + +F+ L AN F +++L+ K
Sbjct: 431 LFDE-------SFETGL----------------------------ANVFVCNTILSWLCK 455
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
EA +LL M GI +V + ++ HC+ +D+A + N+L G PN T
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW------------------------ 321
Y+ LI ++ +A + NHM S+ + V++
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 322 ------------NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
N +ID K G A+ + + I P+ T TS ++ +C++
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 370 DLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVL 427
D E + + + D+ AL+ K + A+ + ++E G P + + L
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY 487
+S G + A+ +Y+ + D +T +I L+K G ++A+ ++ +
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 488 PLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQ 547
D + Y V + L + G+ +++MK+N + PN N ++ Y+E +L + +
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 548 MLKEMIGSRI 557
+ EM+ I
Sbjct: 816 LHDEMLDKGI 825
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 168/422 (39%), Gaps = 39/422 (9%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP-- 174
+L L + G + +M+S G PN + N M H R N+ LA VF I
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 175 --PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
PN +T+ I L M + N + +++N K+ +A
Sbjct: 509 LKPNNYTYSI-LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 233 YQLLGLMVVLG-IQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
+LL M+ + S + +I + G +D A + M G SPNV+TYT+L+
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
++NR+ A + + M++ G D+ + LID K + A +F L ++ + P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
+P N+L+S G+ A + Y
Sbjct: 688 S---------------------QP------------IYNSLISGFRNLGNMVAALDLYKK 714
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M++ G D ++ L+ L G + A ++Y D I+TVI+ L K G+
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
++ +F++ + + Y I R G +A +D+M + G+ P+ T ++
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834
Query: 532 ML 533
++
Sbjct: 835 LV 836
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 38/285 (13%)
Query: 150 NLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRML 205
N +D F+ G + A+ ++++ PN T+ +L + M
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY-TSLMNGLCKNNRMDQALEMRDEMK 646
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
+ + +L++ F K + A L ++ G+ S ++ LI LG +
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
A L + ML G ++ TYTTLI ++ + AS L+ M++ G PD +++ V++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPD 385
+ SK G+ + +F + K N+ P+
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPN--------------------------------- 793
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
++ NA+++ + G+ +A +D M++ G PD +F +L+S
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 199/478 (41%), Gaps = 49/478 (10%)
Query: 61 FFWSSQRRRDHQSVTV-DHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLR 119
F W++++ R S+ V MV +L ++ R+ + ++ ++ L + P F++L++
Sbjct: 134 FVWAAKQPRYCHSIEVYKSMVKILSKM-RQFGAVWGLIEEMRKENPQLIE-PELFVVLVQ 191
Query: 120 ILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFT 179
A M + +M +GF P+ + +DA + G++ A +F+
Sbjct: 192 RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFED-------- 243
Query: 180 FDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
+RM + N F SLL + ++ ++EA +L M
Sbjct: 244 -------------------------MRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 278
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRV 299
G + + +T L+ + G + A LL++M G PN YT LI+A + +R+
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 300 TDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSW 359
+A +F M D+V + L+ K G+ V + K+ + P T
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHI 398
Query: 360 LSMICQSRMFDLLPEPALVFRYID--PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ + F+ E R I+ PD+ N ++ K G +A ++ M E G
Sbjct: 399 MVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Query: 418 APDKYSFAVLLSALCAAGKIYEAVK-----VYRGGVMSSQETDAR--IHTVIIVELIKAG 470
+P +F ++++ L + G + EA V RG SQ + ++TV+ + ++
Sbjct: 459 SPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMA 518
Query: 471 KYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
K + + K A L+ +++ + I AL G +AC++ +M E P T
Sbjct: 519 KDVWSCITSKGAC----ELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDT 572
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 42/307 (13%)
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
+ L++ + ++ V A + + M G PD ++ L+D K G +DA +F +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM- 244
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY----IDPDLVFCNALLSYLVKAGH 401
+ + TS L C R+ ++ ++ + +PD+V LLS AG
Sbjct: 245 RMRFPVNLRYFTSLLYGWC--RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK 302
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
+DA + M GF P+ + VL+ ALC ++ EA+KV+ E D +T
Sbjct: 303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 462 IIVELIKAGK----YLMAATVFKQAVVR-------------------------------K 486
++ K GK Y++ + K+ ++ +
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
Y D Y V I + G +A +++M+ENGL P T +M+ + L + +
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 547 QMLKEMI 553
KEM+
Sbjct: 483 DHFKEMV 489
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 16/323 (4%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV---LWNVLIDCHSKAGRHQDAL 338
++ Y +++K + + L MR P L+ L+ VL+ + A + A+
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRK--ENPQLIEPELFVVLVQRFASADMVKKAI 203
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF---RYIDP-DLVFCNALLS 394
V + K +PD Y L +C+ + + A +F R P +L + +LL
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKH---GSVKDAAKLFEDMRMRFPVNLRYFTSLLY 260
Query: 395 YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
+ G +A M E GF PD + LLS AGK+ +A + R E
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
+A +TV+I L K + A VF + + D V Y + + G+
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 515 DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL-SDRNFLNLC-NFPC 572
D M + GL P+ T ++ K++ ++ +++++M +IE D N+ C
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM--RQIEYHPDIGIYNVVIRLAC 438
Query: 573 RSDAYYSTSNLLAEMREMGLLPA 595
+ L EM E GL P
Sbjct: 439 KLGEVKEAVRLWNEMEENGLSPG 461
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 12/268 (4%)
Query: 211 PNANTFHSLLNAFFK---MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA 267
PN +++++N + K MD L YQ +G + V + ILI+ +C+ D+A
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERA---KPDVCTFNILINGYCRSSKFDLA 247
Query: 268 NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
L + M GC PNVV++ TLI+ ++ S ++ + + M G +L+D
Sbjct: 248 LDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALVFRYID 383
+ GR DA G+ L + + P + S + +C R +++ E L +
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEE--LWKKGQT 365
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P + C L+ L K+G A+ F + M+ G PD +F +LL LC++ +A ++
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGK 471
E D + V++ K G+
Sbjct: 426 RLLASSKGYEPDETTYHVLVSGFTKEGR 453
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 7/299 (2%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXXXXXXXXX 199
PN N ++ + + G++ AL +Q++ P+ TF+I L +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNI-LINGYCRSSKFDLALD 249
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
+ M PN +F++L+ F + E ++ M+ LG +FS IL+ C
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G +D A L+ ++L+ P+ Y +L++ N+ A + + G TP +
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
L++ K+GR + A G + I PD T L +C S L+
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 380 --RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+ +PD + L+S K G + + M++ PD +++ L+ L GK
Sbjct: 430 SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 146/329 (44%), Gaps = 7/329 (2%)
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
A+ L+ LM ++ S+ +TILI ++ + G+ A M GC P+ + ++ +I
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
R ++A + F+ ++ PD++++ L+ +AG +A VF+ + I+P
Sbjct: 230 NLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 352 DPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
+ YT + + +C+ SR D+ + ++ P+ + N L+ VKAG +
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFAD--MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQ 346
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
Y+ M +LG PD ++ L+ A C + AVKV + E +A I +
Sbjct: 347 VYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIE 406
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
K A ++ + + K + V Y + + + S T +M + ++PN +
Sbjct: 407 KKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVN 466
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
T +++ F ++ KEM+ +
Sbjct: 467 TYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/426 (19%), Positives = 188/426 (44%), Gaps = 53/426 (12%)
Query: 57 ALSCFFWSSQRRR-DHQSV-TVDHMVPVLGRLTRRHKTLQAI-LLQLESIGCILTKNPNS 113
+L+ F W++ R DH+S + M+ + G++ + I L++ ++ + +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISI----ET 188
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
F +L+R RAG+ + +++M+ YG VP+ A ++ + R A + F
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-- 246
Query: 174 PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAY 233
L+ + P+ + +L+ + + + EA
Sbjct: 247 -------------------------------LKDRFEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 234 QLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAY 293
++ M + GI+ +V ++I+I C+ G + A+ + +ML +GC+PN +T+ L++ +
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVH 335
Query: 294 MESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDP 353
+++ R ++N M+ G PD + +N LI+ H + ++A+ V ++ K+ + +
Sbjct: 336 VKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA 395
Query: 354 YTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
T + I + RM+ + E +P+ V N L+ V +
Sbjct: 396 STFNTIFRYIEKKRDVNGAHRMYSKMMEAK-----CEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA-RIHTVIIVE 465
+ M + P+ ++ +L++ C G A K+++ V T + ++ +++ +
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 466 LIKAGK 471
L +AG+
Sbjct: 511 LRRAGQ 516
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 146/344 (42%), Gaps = 10/344 (2%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
D+A L+ M ++ T+T LI+ Y+ + ++A + FN M G PD + +++
Sbjct: 167 FDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSI 226
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-- 381
+I S+ R +A F SL K +PD T+ + C++ + E VF+
Sbjct: 227 VISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRA---GEISEAEKVFKEMK 282
Query: 382 ---IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
I+P++ + ++ L + G S A + + M++ G AP+ +F L+ AG+
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+ ++VY E D + +I + A V + +K ++ +
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
+ + A Y +M E +PN T N+++ F K V +M KEM +E
Sbjct: 403 RYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAEM-REMGLLPAKALHAL 601
+ + L C + + L EM E L P+ +L+ +
Sbjct: 463 PNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEM 506
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 13/246 (5%)
Query: 73 SVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQ 132
S+ +D + G+++R H +L GC N +F L+R+ +AG Q
Sbjct: 294 SIVIDALCRC-GQISRAHDVFADML----DSGC--APNAITFNNLMRVHVKAGRTEKVLQ 346
Query: 133 AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL----TVFQQIQPPNFFTFDITLFHLS 188
Y+QM+ G P+T N ++AH R NL A+ T+ ++ N TF+ T+F
Sbjct: 347 VYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFN-TIFRYI 405
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSV 248
+M+ PN T++ L+ F + ++ M ++ +V
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGC-SPNVVTYTTLIKAYMESNRVTDASNLFN 307
N + +L+ C +G + A KL + M+ C +P++ Y ++ + ++ L
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 308 HMRSAG 313
M G
Sbjct: 526 KMIQKG 531
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 167/411 (40%), Gaps = 73/411 (17%)
Query: 61 FFWS-SQRRRDHQSVTVDHMVPVLGR----------LTRRHKTLQAILLQLESIGCILTK 109
F W+ SQ H T + MV VLG+ + +K ++ L+ L+++ ++
Sbjct: 153 FIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVM-- 210
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQ-SYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
R L ++G + A+ +M+ SYG +T A N MDA + ++ A V
Sbjct: 211 ---------RRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV 261
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
F ++ FD P+A TF+ L++ F K
Sbjct: 262 FLKL-------FDTI--------------------------KPDARTFNILIHGFCKARK 288
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+A ++ LM V V +T + +C+ G N++L+ M GC+PNVVTYT
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
++ + +S +V +A ++ M+ G PD ++ LI SK GR +DA +F ++ Q
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 349 IQPDPYTLTSWLSMICQ-----------SRMFDLLPEPALVFRYIDPDLVFCNALLSYLV 397
++ D + +S RM D E P++ LL
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC------SPNVETYAPLLKMCC 462
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGV 448
M++ + D ++ +L+ LC +GK+ EA + V
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAV 513
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 146/346 (42%), Gaps = 42/346 (12%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
+SL++A K +++ A+++ L + I+ + ILIH C+ D A ++ M
Sbjct: 242 MNSLMDALVKENSIEHAHEVF-LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMK 300
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
T +P+VVTYT+ ++AY + + + MR G P++V + +++ K+ +
Sbjct: 301 VTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVA 360
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSY 395
+ALGV+ + + PD F ++L+
Sbjct: 361 EALGVYEKMKEDGCVPDAK---------------------------------FYSSLIHI 387
Query: 396 LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETD 455
L K G DAAE ++ M G D + ++SA + A+++ + M +E +
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKR--MEDEEGE 445
Query: 456 A-----RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ + ++ K + + V +D Y + I L SG+ +A
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
C F+++ G+ P TC M++ K K++ + ++ ++ S+
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLVDELEK-KNMAEAKLKIQSLVQSK 550
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 125/299 (41%), Gaps = 4/299 (1%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ-PPNFFTFDITLFHLSNXXXXX 194
+M+S GF P+ N + G L ++I P+ +++I + SN
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 195 XXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTIL 254
+ M++ P T+++L++ F + + A L+ + GI + IL
Sbjct: 345 MAFAYRDE-MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 255 IHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH 314
I+ +CQ G A L M+ G P TYT+LI N+ +A LF + G
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 315 TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE 374
PDLV+ N L+D H G A + + + +I PD T + +C F+ E
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 375 --PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
+ R I PD + N L+S K G A D M+ LGF P ++ LL L
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 159/415 (38%), Gaps = 40/415 (9%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M RM N TF+ ++N K L +A LG+M V GI+ ++ + L+ G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
++ A ++ M G P++ TY ++ R AS + M+ G PD V +N+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNI 332
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL----------------------S 361
LI S G + A + KQ + P YT + +
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 362 MICQSRMFDLLPE---------------PALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
++ S +++L ++ I P +L+ L + +A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVEL 466
E ++ ++ G PD L+ CA G + A + + M S D + ++ L
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 467 IKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNA 526
GK+ A + + R D+++Y I + G T A D+M G P
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 527 HTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTS 581
T N +L K ++ + ++L+EM I +D +F ++ DA S S
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSDS 627
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 169/423 (39%), Gaps = 40/423 (9%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
+YP T + +L +++ + A+ M + I+ +V + I+I+ C+ G L A
Sbjct: 186 FYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAK 245
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDL---------- 318
L M G P +VTY TL++ + R+ A + + M+S G PD+
Sbjct: 246 GFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWM 305
Query: 319 ----------------------VLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTL 356
V +N+LI S G + A + KQ + P YT
Sbjct: 306 CNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT- 364
Query: 357 TSWLSMICQSRMFDLLPEPALVFRYIDP-----DLVFCNALLSYLVKAGHPSDAAEFYDL 411
+ ++I M + + ++ R I D V N L++ + G A +D
Sbjct: 365 --YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M+ G P ++++ L+ LC K EA +++ V + D + ++ G
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
A ++ K+ + D+V Y + L G+ +A +MK G+KP+ + N
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
++ + K+ D + + EM+ + + L ++ LL EM+ G
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 592 LLP 594
++P
Sbjct: 603 IVP 605
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 127/339 (37%), Gaps = 38/339 (11%)
Query: 96 ILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDA 155
+L +++ IG L + S+ +L+R G M F +M G VP + N +
Sbjct: 314 VLREMKEIG--LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 156 HFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSN---XXXXXXXXXXXXKRMLRMHYYPN 212
F + A + ++I+ +T L N M+ P
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
T+ SL+ + + EA +L +V G++ + + L+ HC +G +D A LL+
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
M +P+ VTY L++ + +A L M+ G PD + +N LI +SK G
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNAL 392
+ A V + M L +P L+ NAL
Sbjct: 552 DTKHAFMV------------------------RDEMLSL---------GFNPTLLTYNAL 578
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
L L K A E M G P+ SF ++ A+
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 19/326 (5%)
Query: 280 SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG---HTPDLVLWNVLIDCHSKAGRHQD 336
SP VT L+K + S R NLF+ + A T +L+++L+ C + +
Sbjct: 117 SPKPVT--QLLKEVVTS-RKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDE 173
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF------RYIDPDLVFCN 390
A+ F + ++ P T L+++ SR+ + E A VF I ++ N
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLL--SRLNRI--ENAWVFYADMYRMEIKSNVYTFN 229
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
+++ L K G A F +M G P ++ L+ G+I A +
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ D + + I+ + G+ A+ V ++ D+V+Y + I +G A
Sbjct: 290 GFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNF 570
+ D+M + G+ P +T N ++ + E ++ +++E+ I L + L N
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 571 PCRSDAYYSTSNLLAEMREMGLLPAK 596
C+ L EM G+ P +
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQ 432
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 176/391 (45%), Gaps = 10/391 (2%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M R Y F ++ ++ + L +A ++L LM G++ ++ + I +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L+ A + L+ M G PNVVTY +I+ Y + +RV +A L M S G PD V +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQ-NIQPDPYTLTSWLSMICQSRMFD-----LLPEPAL 377
++ K R + + + ++K+ + PD T + + M+ + D L
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA-PDKYSFAVLLSALCAAGK 436
FR D + +A++ L K G S+A + + M+ G PD ++ +++ C G+
Sbjct: 413 GFRI---DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
+ +A K+ + + + +T ++ + + GK L A + + + +++ Y+V
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
+ L R G+ +AC +M G P N++L + ++ + + ++E +
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 557 IELSDRNFLNLCNFPCRSDAYYSTSNLLAEM 587
++ NF + + C++D + ++L +M
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 157/350 (44%), Gaps = 6/350 (1%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
Y + ++S+L K + ++L LM GI + ++ ++ + + G L A
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
K+L M G PN++ T I ++ +NR+ A M+ G P++V +N +I +
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF----DLLPEPALVFRYIDP 384
R ++A+ + + + PD + + + +C+ + DL+ + A + P
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV-P 381
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
D V N L+ L K H +A F E GF DK ++ ++ ALC G++ EA +
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441
Query: 445 RGGVMSSQ-ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
+ D +T ++ + G+ A + + + + V+Y + + R
Sbjct: 442 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCR 501
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
+G++ +A + +E+ PN+ T ++++ +E L + +++EM+
Sbjct: 502 TGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/515 (21%), Positives = 202/515 (39%), Gaps = 52/515 (10%)
Query: 50 VRSSD--LIALSCFFWSS-QRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCI 106
+RS D +AL F+W+ Q R H + M+ VL + T+ + + +L+ ++ G
Sbjct: 181 LRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSK-TKLCQGSRRVLVLMKRRG-- 237
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
+ + P +F ++ RAG + MQ G PN N +D R L AL
Sbjct: 238 IYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKAL 297
Query: 167 TVFQQIQ----PPNFFTFDI----------------------------------TLFHLS 188
+++Q PN T++ T+
Sbjct: 298 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 189 NXXXXXXXXXXXXKRMLRMH-YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
K+M + H P+ T+++L++ K D EA L G +
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRID 417
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTG-CSPNVVTYTTLIKAYMESNRVTDASNLF 306
++ ++H C+ G + A L+ ML G C P+VVTYT ++ + V A L
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ- 365
M + GH P+ V + L++ + G+ +A + + P+ T + + + +
Sbjct: 478 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 537
Query: 366 ---SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
S D++ E +V + P V N LL L + G +A +F + + G A +
Sbjct: 538 GKLSEACDVVRE--MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 595
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
+F ++ C ++ A+ V + ++ D +T ++ L K G+ A + K+
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
+ + V Y I + G+ D ++M
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 9/313 (2%)
Query: 137 MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXX 192
M ++G PNT + ++ R G A + + PN T+ + + H
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV-IMHGLRREG 538
Query: 193 XXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT 252
+ M+ ++P + LL + + EA + + + G +V +T
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598
Query: 253 ILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA 312
+IH CQ LD A +L +M +V TYTTL+ + R+ +A+ L M
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVF-RSLSKQNIQPDPYTLTSWLSMICQSRMFDL 371
G P V + +I + + G+ D + + + +S+Q + + L ++ + D
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADT 718
Query: 372 LPEPALVFRYID-PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L V R D C AL+ +K G P A + M PD L
Sbjct: 719 L--LGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKR 776
Query: 431 LCAAGKIYEAVKV 443
L GK+ EA K+
Sbjct: 777 LVLKGKVDEADKL 789
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 189/449 (42%), Gaps = 6/449 (1%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
+P F ++L++ G+ + M +YG +P+ + N + R G +AL V+
Sbjct: 154 SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 170 QQI----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
Q+ P+ FT I + + + N T++SL+N +
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
+ + ++L LM G+ +V +T LI +C+ G+++ A + + + +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y L+ Y + ++ DA + ++M G + + N LI+ + K+G+ +A +F ++
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPS 403
+++PD +T + + C++ D L + + + P ++ N LL + G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVII 463
D + +M++ G D+ S + LL AL G EA+K++ + TD V+I
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 464 VELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
L K K A + + + Y + G +A + M+ G+
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
P N ++ +K + L KV ++ E+
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 184/452 (40%), Gaps = 33/452 (7%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDI 182
RAG + QM VP N+ + + RIG H L++++ + +I
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 183 T-------LFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
+ LF L + R L + T + +++ KM+ + EA ++
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGL----LTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
L + + + +V + L H + ++G L A + + M G P + Y TLI +
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ ++L +R+ G TP + + LI G A + ++ I T
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI-----T 643
Query: 356 LTSWLSMICQSRMF--DLLPEPALVF-RYIDPDLV---------FCNALLSYLVKAGHPS 403
L + + +F D + E L+ + +D DL+ F A + +K +
Sbjct: 644 LNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIA 703
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE--TDARIHTV 461
++ E + + P+ + V ++ LC AGK+ +A K++ ++SS D +T+
Sbjct: 704 ESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF-SDLLSSDRFIPDEYTYTI 760
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
+I AG A T+ + ++ + V Y I L + G A ++ + G
Sbjct: 761 LIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG 820
Query: 522 LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
+ PNA T N ++ K ++ + ++ ++MI
Sbjct: 821 ITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 126/316 (39%), Gaps = 48/316 (15%)
Query: 280 SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
SP V + ++K Y E V +A ++F++M + G P L+ N L+ + G + AL
Sbjct: 154 SPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALH 211
Query: 340 VFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF-------------------- 379
V+ + + PD +T + ++ C+S D A+VF
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVD----KAMVFAKETESSLGLELNVVTYNSL 267
Query: 380 ----------------------RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
R + ++V +L+ K G +A ++L+ E
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
D++ + VL+ C G+I +AV+V+ + T+ I +I K+G+ + A
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
+F + D+ Y + R+G +A DQM + + P T N++L +
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 538 KEKDLQKVNQMLKEMI 553
+ V + K M+
Sbjct: 448 RIGAFHDVLSLWKMML 463
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 170 QQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
+++ PN +++ + L + + P+ T+ L++ +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
+A+ L M + GI ++ + LI C+LG +D A +LL + G +PN +TY TL
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831
Query: 290 IKAYMESNRVTDASNLFNHMRSAG 313
I ++S V +A L M G
Sbjct: 832 IDGLVKSGNVAEAMRLKEKMIEKG 855
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 164/398 (41%), Gaps = 33/398 (8%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
KR+ + P T+ L+N + K+ + +A ++ +M G++ ++ ++++I+ +L
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
A + ++M+ G P+V+ Y +I A+ + A M+ H P +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
+I ++K+G + +L VF + + P +T
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF------------------------- 627
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
N L++ LV+ A E D M G + +++++ ++ + G +A
Sbjct: 628 --------NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 679
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+ + + D + ++ K+G+ A V K+ R P ++ Y + I
Sbjct: 680 EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 739
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
R G +A QMK+ G+KP+ HT + K D+ + Q ++EM ++ +
Sbjct: 740 ARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 799
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALH 599
+ + L R+ + EM+ MG+ P KA++
Sbjct: 800 KTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 152/348 (43%), Gaps = 24/348 (6%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFH 186
F + M G P+ N + A +GN+ A+ +++Q P TF + + H
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF-MPIIH 597
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
M R P +TF+ L+N + + +A ++L M + G+
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ + +T ++ + +G A + + + G ++ TY L+KA +S R+ A +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
M + + ++N+LID ++ G +A + + + K+ ++PD +T TS++S ++
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 367 ----RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
R + E + + P++ L+ +A P A Y+ M +G PDK
Sbjct: 778 GDMNRATQTIEEMEALG--VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAG 470
+ LL++L + I EA +Y GVM+ I E+++AG
Sbjct: 836 VYHCLLTSLLSRASIAEAY-IY-SGVMT-----------ICKEMVEAG 870
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/401 (18%), Positives = 159/401 (39%), Gaps = 13/401 (3%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP----NFFTFDITLFHLSN 189
+ +++ GF P ++ + ++G + AL V + ++ N T+ + +
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
+ M++ P+ ++++++AF M + A Q + M L + +
Sbjct: 532 -LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+ +IH + + G + + ++ M GC P V T+ LI +E ++ A + + M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RM 368
AG + + + ++ ++ G A F L + + D +T + L C+S RM
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 369 FDLLP-EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVL 427
L + R I + N L+ + G +AA+ M + G PD +++
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY 487
+SA AG + A + + + + +T +I +A A + +++
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 488 PLDNVAYAVGICALLRSGRTPDA------CTFYDQMKENGL 522
D Y + +LL +A T +M E GL
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGL 871
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/365 (18%), Positives = 145/365 (39%), Gaps = 14/365 (3%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ F ++ + + + A + M GI + ++T LIH + +D A
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
++ M G ++VTY+ ++ + ++ A F+ + T + ++ +I H +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 331 AGRHQDALGVFRSLSKQNIQPDP---YTLTSWLSMICQSR----MFDLLPEPALVFRYID 383
+ A + R + ++ I +T+ +M+ + +F L E
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT----- 481
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P +V L++ K G S A E +M E G + +++++++ A V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMA-ATVFKQAVVRKYPLDNVAYAVGICALL 502
+ V + D ++ II G A TV + +R P + I
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI-IHGYA 600
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR 562
+SG + +D M+ G P HT N ++ +++ ++K ++L EM + + ++
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 563 NFLNL 567
+ +
Sbjct: 661 TYTKI 665
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 201/452 (44%), Gaps = 24/452 (5%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ--- 173
LL L +A + M S G +P+ A ++ + GN+ A+ + ++++
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 174 -PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
P N T++ + L +R+++ PNA T+ LL A +K EA
Sbjct: 172 YPSNTVTYNALVRGLC-MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
+LL ++V G + ++ + +L+ C+ G D A L + + G NVV+Y L++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
R +A++L M P +V +N+LI+ + GR + AL V + +SK N Q
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFR 350
Query: 353 PYTLTSW---LSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
T TS+ ++ +C+ DL+ + +++R P+ NA+ S H S E
Sbjct: 351 -VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSL---CEHNSKVQE 406
Query: 408 FYDLMIELGFAPDKYS---FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
+ ++ L + + ++++LC G + A ++ + DA ++ +I
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 465 ELIKAGKYLMAA---TVFKQAVVRKYPLDNV-AYAVGICALLRSGRTPDACTFYDQMKEN 520
L G + A ++ +++ K +DN A +G+C + RT A ++ M E
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIR---RTDLAMEVFEMMVEK 523
Query: 521 GLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
PN T +++ E +L+ ++L E+
Sbjct: 524 KRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 178/465 (38%), Gaps = 60/465 (12%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
+ PN LL K + L +A +++ LMV GI + +T L+++ C+ G + A
Sbjct: 102 HKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 269 KLLQNMLHTGCSPNVVTYTTLIK------------------------------------A 292
+L++ M G N VTY L++ A
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 293 YMESNRVTD-ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
Y E R TD A L + + G P+LV +NVL+ K GR DA+ +FR L + +
Sbjct: 222 YKE--RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDAA 406
+ + L +C ++ E + +D P +V N L++ L G A
Sbjct: 280 NVVSYNILLRCLCCDGRWE---EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAL 336
Query: 407 EFYDLMIELG--FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
+ M + F S+ +++ LC GK+ VK + + + + I
Sbjct: 337 QVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGS 396
Query: 465 ELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP 524
K A + + ++ + Y I +L R G T A +M G P
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP 456
Query: 525 NAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR-----IELSDRNFLNLCNFPCRSDAYYS 579
+AHT + ++ E ++L M S ++ + L LC R+D
Sbjct: 457 DAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIR-RTDLAME 515
Query: 580 TSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAEVNTEL 624
++ E + M P + +A+ + A E++ E EV EL
Sbjct: 516 VFEMMVEKKRM---PNETTYAILVEGIAH--EDELELAKEVLDEL 555
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 9/257 (3%)
Query: 303 SNLFNHMRS---AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSW 359
S+ F+H+ S GH P++ L+ KA R + A+ V + I PD T
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 360 LSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
++ +C+ + LV + D + V NAL+ L G + + +F + +++
Sbjct: 148 VNQLCKRGNVGYAMQ--LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 416 GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMA 475
G AP+ ++++ LL A EAVK+ ++ E + + V++ K G+ A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 476 ATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFT 535
+F++ + + + V+Y + + L GR +A + +M P+ T N+++ +
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 536 FYKEKDLQKVNQMLKEM 552
++ Q+LKEM
Sbjct: 326 LAFHGRTEQALQVLKEM 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
SD+ + ++ G P+ LL LC A ++ +A++V V S DA +T +
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ +L K G A + ++ YP + V Y + L G + F +++ + GL
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI--GSRIELSDRNFLNLCNFPCRSDAYYST 580
PNA T + +L YKE+ + ++L E+I G L N L L F C+ T
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVL-LTGF-CKEG---RT 262
Query: 581 SNLLAEMREMGLLPAKALHA 600
+ +A RE LPAK A
Sbjct: 263 DDAMALFRE---LPAKGFKA 279
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 182/478 (38%), Gaps = 105/478 (21%)
Query: 51 RSSDLIALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKN 110
R++ L+ F WS ++R SV HM+ R++K + ++ + + N
Sbjct: 111 RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML---N 167
Query: 111 PNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQ 170
+F +++R RA A++ M+ Y PN A N + A + N+ A VF+
Sbjct: 168 VETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE 227
Query: 171 QIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALL 230
+R + P++ T+ LL + K L
Sbjct: 228 N---------------------------------MRDRFTPDSKTYSILLEGWGKEPNLP 254
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
+A ++ M+ G + ++I++ C+ G +D A ++++M + C P Y+ L+
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
Y NR+ +A + F M +G D+ ++N LI KA R ++ V + + + +
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 351 PDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYD 410
P+ + CN +L +L++ G +A + +
Sbjct: 375 PNSKS---------------------------------CNIILRHLIERGEKDEAFDVFR 401
Query: 411 LMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAG 470
MI++ PD ++ +++ C ++ A KV+
Sbjct: 402 KMIKVC-EPDADTYTMVIKMFCEKKEMETADKVW-------------------------- 434
Query: 471 KYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
KY+ VF ++V I L T AC ++M E G++P+ T
Sbjct: 435 KYMRKKGVFPSM---------HTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 154/365 (42%), Gaps = 11/365 (3%)
Query: 208 HYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA 267
HY + +H ++ + K+ + L+ M + +V + I++ K+ + +D A
Sbjct: 129 HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEA 187
Query: 268 NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
M PN+V + L+ A +S V A +F +MR TPD +++L++
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEG 246
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLV 387
K A VFR + PD T + + ++C++ D E + R +DP +
Sbjct: 247 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD---EALGIVRSMDPSIC 303
Query: 388 FCNALL-SYLVKA-GHPSDAAEFYDLMIEL---GFAPDKYSFAVLLSALCAAGKIYEAVK 442
+ S LV G + E D +E+ G D F L+ A C A ++ +
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR 363
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
V + +++ +I+ LI+ G+ A VF++ + P D Y + I
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP-DADTYTMVIKMFC 422
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR 562
A + M++ G+ P+ HT ++++ +E+ QK +L+EMI I S
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 563 NFLNL 567
F L
Sbjct: 483 TFGRL 487
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
NV T+ +++ Y + +V +A FN M P+LV +N L+ K+ + A VF
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR-YID----PDLVFCNALLSYL 396
++ + PD T + L + LP+ VFR ID PD+V + ++ L
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKE---PNLPKAREVFREMIDAGCHPDIVTYSIMVDIL 282
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
KAG +A M P + ++VL+ ++ EAV + S + D
Sbjct: 283 CKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADV 342
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
+ +I KA + V K+ + ++ + + + L+ G +A + +
Sbjct: 343 AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRK 402
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDA 576
M + +P+A T M++ F ++K+++ +++ K M + S F L N C
Sbjct: 403 MIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERT 461
Query: 577 YYSTSNLLAEMREMGLLPA 595
LL EM EMG+ P+
Sbjct: 462 TQKACVLLEEMIEMGIRPS 480
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 6/245 (2%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHL 187
+ + +M G P+ ++ +D + G + AL + + + P P F + + L H
Sbjct: 258 EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV-LVHT 316
Query: 188 SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS 247
M R + F+SL+ AF K + + Y++L M G+ +
Sbjct: 317 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
I++ + G D A + + M+ C P+ TYT +IK + E + A ++
Sbjct: 377 SKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWK 435
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
+MR G P + ++VLI+ + Q A + + + I+P T ++ +
Sbjct: 436 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495
Query: 368 MFDLL 372
D+L
Sbjct: 496 REDVL 500
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 176/431 (40%), Gaps = 38/431 (8%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMV-VLGIQFSVNVWTILIHKHCQ 260
+R++ P+ F + A K L+ A LL M LG+ S +T +I +
Sbjct: 263 RRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVK 322
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
G ++ A +++ M+ G +V+ T+L+ Y + N + A +LFN M G PD V+
Sbjct: 323 EGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVM 382
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPY------------------------TL 356
++V+++ K + A+ + + I P +
Sbjct: 383 FSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF 442
Query: 357 TSWLS----------MICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSD 404
SW++ + C+ D + + I+P++VF N ++ + +
Sbjct: 443 ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDL 502
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
A + M+E G P+ +++++L+ A V S+ E + I+ II
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 465 ELIKAGKYLMAATVFKQAVVRK-YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
L K G+ A + + + K Y + +Y I ++ G T A Y +M ENG
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNL 583
PN T ++ F K + +M EM ++L + L + C+ + + L
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 584 LAEMREMGLLP 594
+E+ E+GL+P
Sbjct: 683 FSELPELGLMP 693
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 164/391 (41%), Gaps = 39/391 (9%)
Query: 137 MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI----QPPNFFTFDITLFHLSNXXX 192
M+ G PN N M AH R+ N+ LA ++F ++ PN FT+ I L
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI-LIDGFFKNK 533
Query: 193 XXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL-GLMVVLGIQFSVNVW 251
+M ++ N +++++N K+ +A ++L L+ S +
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+I ++G D A + + M G SPNVVT+T+LI + +SNR+ A + + M+S
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL 371
DL + LID K+N YTL F
Sbjct: 654 MELKLDLPAYGALID----------------GFCKKNDMKTAYTL------------FSE 685
Query: 372 LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
LPE L+ P++ N+L+S G A + Y M+ G + D +++ ++ L
Sbjct: 686 LPELGLM-----PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740
Query: 432 CAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN 491
G I A +Y + D +H V++ L K G++L A+ + ++ + +
Sbjct: 741 LKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNV 800
Query: 492 VAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ Y+ I R G +A +D+M E G+
Sbjct: 801 LLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 158/380 (41%), Gaps = 38/380 (10%)
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
F K + A L +M GI+ +V + ++ HC++ +D+A + ML G PN
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID---------------- 326
TY+ LI + ++ +A ++ N M ++ + V++N +I+
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 327 -----------CHS---------KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
C S K G A+ +R +S+ P+ T TS ++ C+S
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 367 RMFDLLPEPALVFRYIDP--DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
DL E + ++ DL AL+ K A + + ELG P+ +
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
L+S GK+ A+ +Y+ V D +T +I L+K G +A+ ++ + +
Sbjct: 699 NSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
D + + V + L + G+ A ++MK+ + PN + ++ ++E +L +
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Query: 545 VNQMLKEMIGSRIELSDRNF 564
++ EM+ I D F
Sbjct: 819 AFRLHDEMLEKGIVHDDTVF 838
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 176/424 (41%), Gaps = 61/424 (14%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLM----VVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
F+ LLNA+ + + A GLM VV + + NV + L+ + ++D A ++
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSN----LIDEAKEIY 227
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
M+ G + + VT L++A + + +A +F + S G PD +L+++ + K
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKT 287
Query: 332 GRHQDALGVFRSL-SKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYID 383
AL + R + K + T TS + + R+ D +V I
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD-----EMVGFGIP 342
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
++ +L++ K A + ++ M E G APDK F+V++ C ++ +A++
Sbjct: 343 MSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Query: 444 YR------------------GGVMSSQETDARIHTV----------------IIVELIKA 469
Y G + ++ +A + I + K
Sbjct: 403 YMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQ 462
Query: 470 GKYLMAATVFKQAVVRKYPLDNVA-YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
GK + AAT F + + +K NV Y + A R A + + +M E GL+PN T
Sbjct: 463 GK-VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFT 521
Query: 529 CNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR----SDAYYSTSNLL 584
++++ F+K KD Q ++ +M S E ++ + + N C+ S A NL+
Sbjct: 522 YSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Query: 585 AEMR 588
E R
Sbjct: 582 KEKR 585
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 377 LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+V R + P + + N +LS LV++ +A E Y+ M+ +G A D + +L+ A K
Sbjct: 195 MVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
EAVK++R + E D + ++ + K +MA LD
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMA-------------LD------ 295
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
LLR R + G+ + T ++ F KE ++++ +++ EM+G
Sbjct: 296 ----LLREMRG-----------KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 557 IELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLE 611
I +S +L N C+ + +L M E GL P K + ++ + + +++E
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME 395
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
ML P+ TF++L+N + K+ ++EA Q + ++ G +T I HC+
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+D A K+ + M GC N V+YT LI E+ ++ +A +L M+ P++ +
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY- 381
VLID +G+ +A+ +F+ +S+ I+PD T + C D L E + + +
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSG---DTLDEASGLLEHM 321
Query: 382 ----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ P+++ NAL+ K + A M+E PD ++ L++ C++G +
Sbjct: 322 LENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 438 YEAVKVY----RGGVMSSQET 454
A ++ G++ +Q T
Sbjct: 381 DSAYRLLSLMEESGLVPNQRT 401
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 7/279 (2%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
L+ + G+++ +L ML SP++ T+ TL+ Y + V +A + AG
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP 373
PD + I H + A VF+ +++ + + T + + +++ D
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID--E 243
Query: 374 EPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
+L+ + D P++ L+ L +G S+A + M E G PD + VL+
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
+ C+ + EA + + + + + +I K + + K P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVP- 362
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
D + Y I SG A M+E+GL PN T
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ PD+ N L++ K G+ +A ++ +I+ G PD +++ ++ C ++ A
Sbjct: 151 VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAF 210
Query: 442 KVYRG------------------GVMSSQETD-----------------ARIHTVIIVEL 466
KV++ G+ +++ D R +TV+I L
Sbjct: 211 KVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDAL 270
Query: 467 IKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNA 526
+G+ A +FKQ D+ Y V I + +A + M ENGL PN
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 527 HTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAE 586
T N ++ F K K++ K +L +M+ + + L C S S LL+
Sbjct: 331 ITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSL 389
Query: 587 MREMGLLP 594
M E GL+P
Sbjct: 390 MEESGLVP 397
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
N LLS L + G + Y M+E +PD Y+F L++ C G + EA + +
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ + D +T I + + A VFK+ + V+Y I L + + +
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
A + +MK++ PN T +++ + + K+M S I+ D + L
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 570 FPCRSDAYYSTSNLLAEMREMGLLP 594
C D S LL M E GL+P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMP 328
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 161/358 (44%), Gaps = 17/358 (4%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ F++++NA + L +A ++ M G + + + + LI + ++G L+ +++L
Sbjct: 387 PDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRL 446
Query: 271 LQNMLHTG-CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
L ML PN T L++A+ ++ +A N+ M+S G PD+V +N L ++
Sbjct: 447 LDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
Query: 330 KAGRHQDALG-VFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY------I 382
+ G A + + ++P+ T + ++ C+ E AL F Y +
Sbjct: 507 RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM----EEALRFFYRMKELGV 562
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
P+L N+L+ + E DLM E G PD +F+ L++A + G + +
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL--DNVAYAVGICA 500
+Y + + D +++ +AG+ A + Q +RK+ + + V Y I
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ--MRKFGVRPNVVIYTQIISG 680
Query: 501 LLRSGRTPDACTFYDQM-KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
+G A Y +M GL PN T +++ F + K K ++LK+M G +
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 15/321 (4%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXX 191
+++ G P+T N ++A GNL A+ +F++++ P TF+ TL
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN-TLIKGYGKI 437
Query: 192 XXXXXXXXXXKRMLRMHY-YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
MLR PN T + L+ A+ + EA+ ++ M G++ V
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 251 WTILIHKHCQLGILDVA-NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+ L + ++G A + ++ MLH PNV T T++ Y E ++ +A F M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ-NIQPDPYT----LTSWLSMIC 364
+ G P+L ++N LI D +G L ++ ++PD T + +W S+
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNI-NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 365 QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
R ++ + ++ IDPD+ + L +AG P A + + M + G P+ +
Sbjct: 617 MKRCEEIYTD--MLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 425 AVLLSALCAAGKIYEAVKVYR 445
++S C+AG++ +A++VY+
Sbjct: 675 TQIISGWCSAGEMKKAMQVYK 695
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP--------PNFFTFDITLFH 186
++MQSYG P+ N A+ RIG+ T I P PN T T+ +
Sbjct: 484 YKMQSYGVKPDVVTFNTLAKAYARIGS---TCTAEDMIIPRMLHNKVKPNVRTCG-TIVN 539
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
RM + +PN F+SL+ F ++ + +++ LM G++
Sbjct: 540 GYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKP 599
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
V ++ L++ +G + ++ +ML G P++ ++ L K Y + A +
Sbjct: 600 DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 659
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
N MR G P++V++ +I AG + A+ V++ +
Sbjct: 660 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 143/374 (38%), Gaps = 48/374 (12%)
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
T L++ + G A+ + ++ G P+++TYTTL+ A +L + +
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL 371
G PD +L+N +I+ S++G A+ +F + + +P T
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTF--------------- 427
Query: 372 LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI-ELGFAPDKYSFAVLLSA 430
N L+ K G +++ D+M+ + P+ + +L+ A
Sbjct: 428 ------------------NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQA 469
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
C KI EA + V Q + V L KA + + + ++ + +
Sbjct: 470 WCNQRKIEEAWNI----VYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 491 NVAYAVGICALL-----RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
V V C + G+ +A F+ +MKE G+ PN N ++ F D+ V
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 546 NQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALS--S 603
+++ M ++ F L N + +M E G+ P +HA S +
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP--DIHAFSILA 643
Query: 604 DKYAESLE-EKYEH 616
YA + E EK E
Sbjct: 644 KGYARAGEPEKAEQ 657
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 11/226 (4%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSN 189
+++M+ G PN F N + I ++ V ++ P+ TF TL + +
Sbjct: 554 FYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS-TLMNAWS 612
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
ML P+ + F L + + +A Q+L M G++ +V
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLH-TGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
++T +I C G + A ++ + M G SPN+ TY TLI + E+ + A L
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAG----RHQDALG-VFRSLSKQNI 349
M P ++ D G + LG F + SK NI
Sbjct: 733 MEGKNVVPTRKTMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLNI 778
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 171/423 (40%), Gaps = 38/423 (8%)
Query: 210 YPNANTFHSLL-NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
Y + S+L NA F+ LL + +LL + G + S + +LI +LG+ N
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ + G P+ Y +I A ++SN + A F MRS G PD +N+LI
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLT-------------SWLSMICQSRMFDLLPEP 375
K G +A+ + + + ++ +P+ +T T L + R+ L P
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 376 AL-------VFRYIDPDLVF-----------------CNALLSYLVKAGHPSDAAEFYDL 411
A +FR + P F +A+L L + +F
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
+ E G+ PD +F +S L + E +++ G V + + V++ L+ A +
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
+ KQ V +Y I L ++ R +A F +M++ G+ PN T N
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
L + D++KV+ +L++++ + F + N CR+ + EM E G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 592 LLP 594
+ P
Sbjct: 526 IEP 528
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/547 (21%), Positives = 212/547 (38%), Gaps = 94/547 (17%)
Query: 149 RNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH 208
+++ +A FR G L L++ + ++I+ + D + L ++
Sbjct: 113 KSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQIS 172
Query: 209 YY---PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
+ P+ ++++++A K ++L AY M G + + ILIH C+ G++D
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVD 232
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD-------- 317
A +L++ M G PNV TYT LI ++ + RV +A MR P+
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 318 ---------------------------LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
V ++ ++ C S ++ R + ++
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 351 PDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDPD----LVFCNALL------ 393
PD T + +S + + R+FD V R + P LV ALL
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFD-----GFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 394 -------------------SY------LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
SY L KA +AA F M + G +P+ +F L
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
S G + + V ++ + D ++II L +A + A FK+ +
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
+ + Y + I + +G T + + +MKENGL P+ + N + +F K + ++K ++
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 549 LKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAE 608
LK M+ RI L NF + A S S +E REM + H D Y +
Sbjct: 588 LKTML--RIGLKPDNF----TYSTLIKA-LSESGRESEAREM--FSSIERHGCVPDSYTK 638
Query: 609 SLEEKYE 615
L E+ +
Sbjct: 639 RLVEELD 645
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 5/248 (2%)
Query: 112 NSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDA---HFRIGNLHLALTV 168
N +L+L++ L A + + QM G + + ++ N +D RI N + LT
Sbjct: 391 NGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTE 450
Query: 169 FQQIQ-PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
Q PN TF+ L S +++L + P+ TF ++N +
Sbjct: 451 MQDRGISPNLVTFNTFLSGYS-VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+ +A+ M+ GI+ + + ILI C G D + KL M G SP++ Y
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
I+++ + +V A L M G PD ++ LI S++GR +A +F S+ +
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH 629
Query: 348 NIQPDPYT 355
PD YT
Sbjct: 630 GCVPDSYT 637
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 168/397 (42%), Gaps = 12/397 (3%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M PN ++ +LL+ + + LEA + M + + I+I + QL
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
++ A++L ++ PNVV+Y T+++ Y E+ +A +LF M+ ++V +
Sbjct: 344 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N +I + K H+ A + + + + I+P+ T ++ +S+ ++ D A +F+
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD---RAATLFQK 460
Query: 382 -----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
++ D V ++ + G A L+ EL PD ++ L AG+
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVGLMGHAKR---LLHELKL-PDNIPRETAITILAKAGR 516
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
EA V+R S + D + +I + +Y+ VF++ Y D+ A+
Sbjct: 517 TEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM 576
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
+ A + A T Y +M+E G ML + +KD + V + + +
Sbjct: 577 VLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDP 636
Query: 557 IELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLL 593
S L + R+D S ++ MRE G+L
Sbjct: 637 NVNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 673
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 151/346 (43%), Gaps = 39/346 (11%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
GI + + +I+ + + + A L++ M G PN V+Y+TL+ Y+E+++ +A
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
++F M+ DL N++ID + + ++A +F SL K +I+P+ + + L +
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 374
Query: 363 ICQSRMFDLLPEPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
++ +F E +FR I+ ++V N ++ K A M G
Sbjct: 375 YGEAELFG---EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE------------ 465
P+ +++ ++S AGK+ A +++ S E D ++ +IV
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 466 -------------------LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
L KAG+ A VF+QA D + I R+ R
Sbjct: 492 LLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQR 551
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ +++M+ G P+++ M+L + K+++ +K + + +EM
Sbjct: 552 YVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 133/314 (42%), Gaps = 37/314 (11%)
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTP----------------- 316
M+ TGC P+VVT+TTL+ RV A L + M GH P
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 317 --------------DLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
+V++N +ID K G H A +F + + I PD T + +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 363 ICQS-RMFD---LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
C+S R D LL + ++ R I+PD+V +AL++ LVK G S+A E Y M+ G
Sbjct: 121 FCRSGRWTDAEQLLRD--MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
P ++ ++ C ++ +A ++ S D + +I KA + +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
F + R + V Y I + G A + M +G+ PN T ML +
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 539 EKDLQKVNQMLKEM 552
+K+L+K +L+++
Sbjct: 299 KKELRKAFAILEDL 312
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
+M H + ++++++ K + A L M GI V ++ +I C+ G
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A +LL++M+ +P+VVT++ LI A ++ +V++A ++ M G P + +N
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFR 380
+ID K R DA + S++ ++ PD T ++ ++ C+++ D E + R
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
I + V L+ + G A + ++MI G AP+ +F +L++LC+ ++ +A
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 441 VKV 443
+
Sbjct: 306 FAI 308
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 16/245 (6%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM+ + P + +++N KM A LL M I+ V ++ +I + C+ G
Sbjct: 35 RMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A L M G P+V+TY+ +I ++ S R TDA L M PD+V ++
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-------SRMFDLLPEP 375
LI+ K G+ +A ++ + ++ I P T S + C+ RM D
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD----- 205
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
++ + PD+V + L++ KA + E + M G + ++ L+ C G
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Query: 436 KIYEA 440
+ A
Sbjct: 266 DLDAA 270
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 5/230 (2%)
Query: 121 LWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNL----HLALTVFQQIQPPN 176
L + G H + +M G P+ + +D+ R G L + ++ P+
Sbjct: 86 LCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPD 145
Query: 177 FFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
TF + L MLR +P T++S+++ F K D L +A ++L
Sbjct: 146 VVTFSALINALVKEGKVSEAEEIYGD-MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
M V ++ LI+ +C+ +D ++ M G N VTYTTLI + +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
+ A +L N M S+G P+ + + ++ + A + L K
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ TF +L+N + K + ++ M GI + +T LIH CQ+G LD A L
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM-RSAGH 314
L M+ +G +PN +T+ +++ + + A + + +S GH
Sbjct: 274 LNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 155/347 (44%), Gaps = 14/347 (4%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+T L+ CQLG +D L++ + G + V Y+ I Y + + DA M
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G D+V +++LID SK G ++ALG+ + K+ ++P+ T T+ + +C+
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK---MG 326
Query: 371 LLPEPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
L E ++F I+ D L+ + + G+ + A M + G P ++
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 426 VLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR 485
+++ LC AG++ EA +V +G V D ++ ++ IK + ++ +
Sbjct: 387 TVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
K P+D V + + A L G +A Y M E L P+ T M+ + K +++
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 546 NQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
+M E+ S + + + + + C+ + + +L E+ E GL
Sbjct: 502 LEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 152/372 (40%), Gaps = 39/372 (10%)
Query: 145 NTFARNLFMDAHFRIGNLHLALTVFQQ-----IQPPNFFTFDITLFHLSNXXXXXXXXXX 199
+ F + + +IG LAL F+ + PN T+ TL
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTY-TTLVSALCQLGKVDEVRD 228
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
+R+ + + + + ++ +FK AL++A MV G+ V ++ILI
Sbjct: 229 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS 288
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G ++ A LL M+ G PN++TYT +I+ + ++ +A LFN + S G D
Sbjct: 289 KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC------------QSR 367
L+ LID + G A + + ++ IQP T + ++ +C +
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV 408
Query: 368 MFDLLPEPALVFRYIDP--------------------DLVFCNALLSYLVKAGHPSDAAE 407
+ D++ L+ YI DLV CN LL + G +A
Sbjct: 409 VGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADA 468
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
Y M E+ PD ++A ++ C G+I EA++++ + S + A + II L
Sbjct: 469 LYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN-ELRKSSVSAAVCYNRIIDALC 527
Query: 468 KAGKYLMAATVF 479
K G A V
Sbjct: 528 KKGMLDTATEVL 539
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 159/349 (45%), Gaps = 18/349 (5%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN T+ +L++A ++ + E L+ + G +F ++ IH + + G L + L
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGAL--VDAL 262
Query: 271 LQN--MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+Q+ M+ G + +VV+Y+ LI + V +A L M G P+L+ + +I
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDP 384
K G+ ++A +F + I+ D + + + IC+ +R F +L + + R I P
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD--MEQRGIQP 380
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
++ N +++ L AG S+A E + G D +++ LL + I +++
Sbjct: 381 SILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIR 435
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRS 504
R + + D + +++ + G Y A +++ D YA I ++
Sbjct: 436 RRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKT 495
Query: 505 GRTPDACTFYDQMKENGLKPNAHTC-NMMLFTFYKEKDLQKVNQMLKEM 552
G+ +A +++++++ + +A C N ++ K+ L ++L E+
Sbjct: 496 GQIEEALEMFNELRKSSV--SAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 44/281 (15%)
Query: 219 LLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTG 278
++N K L++A L G+ + + LI+ CQ G L A +L ++ + G
Sbjct: 661 IINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIG 720
Query: 279 CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
P+ VTY LI + DA L + M S G P+++++N ++D + K G+ +DA+
Sbjct: 721 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAM 780
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
V + PD +T++S + C K
Sbjct: 781 RVVSRKMMGRVTPDAFTVSSMIKGYC---------------------------------K 807
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS------Q 452
G +A + + + D + F L+ C G++ EA + R ++S
Sbjct: 808 KGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLIN 867
Query: 453 ETDARIHTV-----IIVELIKAGKYLMAATVFKQAVVRKYP 488
DA + +VEL + G+ A + + YP
Sbjct: 868 RVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYP 908
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N T++SL+N + L+EA +L + +G+ S + ILI C+ G+ A KLL
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+M+ G PN++ Y +++ Y + + DA + + TPD + +I + K
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKK 808
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRM 368
G ++AL VF +NI D + + C + RM
Sbjct: 809 GDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRM 846
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELG-FAPDKYSFAVLLSALCAAGKIYEAVKV 443
D C+A++S K G P A F++ ++ G P+ ++ L+SALC GK+ E +
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL 229
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
R E D ++ I K G + A ++ V + D V+Y++ I L +
Sbjct: 230 VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSK 289
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
G +A +M + G++PN T ++ K L++ + ++ IE+ +
Sbjct: 290 EGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFL 349
Query: 564 FLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA 595
++ L + CR ++L +M + G+ P+
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 106/561 (18%), Positives = 206/561 (36%), Gaps = 98/561 (17%)
Query: 111 PN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
PN ++ ++R L + G F ++++ S G + F +D R GNL+ A ++
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 169 FQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFF 224
++ P+ T++ + L + + T+ +LL+++
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLC------MAGRVSEADEVSKGVVGDVITYSTLLDSYI 423
Query: 225 K---MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP 281
K +DA+LE + + I + + IL+ +G A+ L + M +P
Sbjct: 424 KVQNIDAVLEIRRRF---LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA---- 337
+ TY T+IK Y ++ ++ +A +FN +R + + V +N +ID K G A
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVL 539
Query: 338 -------------------------------LGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
LG+ L + N L + ++C+
Sbjct: 540 IELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKR 599
Query: 367 RMFDLLPEPALV---------------------FRYIDPDLVFCNA-------------- 391
F+ E ++ R +D L+ NA
Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYT 659
Query: 392 -LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG---- 446
+++ L K G A G + ++ L++ LC G + EA++++
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
G++ S+ T + ++I L K G +L A + V + + + Y + + G+
Sbjct: 720 GLVPSEVT----YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN 566
T DA + + P+A T + M+ + K+ D+++ + E I FL
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 567 LCNFPCRSDAYYSTSNLLAEM 587
L C LL EM
Sbjct: 836 LIKGFCTKGRMEEARGLLREM 856
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 144/329 (43%), Gaps = 13/329 (3%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
++ F + A+ + + EA + MV GI+ V+ L+H C ++ A +
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
G P+ TY+ L++ + + A +F+ M DL+ +N L+D K+
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRYIDP 384
G +F+ + ++PD Y+ ++ C + ++ D + LV P
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV-----P 311
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
++ N ++ L K DA D MI+ G PD +++ +++ C ++ A K+
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR- 503
+ D + +++ LI+ G++ A +++ RK+ Y V I L+R
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMM 532
G+ +AC +++ M + G+ P + T M+
Sbjct: 432 KGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 4/240 (1%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
+++LL+A K + Y++ M LG++ + I IH +C G + A K+L M
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
PNV T+ +IK ++ +V DA L + M G PD +N ++ H
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEV 364
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNAL 392
A + + + PD +T L ++ + FD E + R P + +
Sbjct: 365 NRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVM 424
Query: 393 LSYLV-KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
+ LV K G +A ++++MI+ G P + +L + L G++ + V V G + S
Sbjct: 425 IHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM-DVVDVLAGKMERS 483
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 83/197 (42%)
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
+A PS+A ++ M+E G P LL +LC + A + + A+
Sbjct: 150 RANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK 209
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
+++++ + A VF + + R +D +AY + AL +SG + +M
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM 269
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAY 577
GLKP+A++ + + + D+ ++L M + + F ++ C+++
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 578 YSTSNLLAEMREMGLLP 594
LL EM + G P
Sbjct: 330 DDAYLLLDEMIQKGANP 346
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 16/376 (4%)
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
+ +Q+ +M +GI + + IL + C + L+ M G P++VTY TL+
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+Y R+ +A L+ M PDLV + LI K GR ++A F + + I+
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 351 PDPYTLTSWLSMICQSRMFD----LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
PD + + + C+ M LL E ++ + PD C ++ V+ G A
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHE--MLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 407 EFYDLMIELGFAPDKYSFAV---LLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI- 462
F ++EL F V L+ +LC GK + A K ++ + +A+ T
Sbjct: 397 NF---VVELRRLKVDIPFEVCDFLIVSLCQEGKPF-AAKHLLDRIIEEEGHEAKPETYNN 452
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYP-LDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
++E + + A V K + + LD Y I L R GR +A + +M ++
Sbjct: 453 LIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSE 512
Query: 522 LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTS 581
+KP++ C +++ + KE D K ++L ++ +L C + Y +
Sbjct: 513 VKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKA 572
Query: 582 NLLAE-MREMGLLPAK 596
L E M+ +G +P +
Sbjct: 573 LELQERMQRLGFVPNR 588
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 134/343 (39%), Gaps = 11/343 (3%)
Query: 279 CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
C+ + V + L+K Y++ V + +F + +G + +V N L++ K +D
Sbjct: 162 CNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYL 396
V+ + + I P+ YT ++ C F + + + +PDLV N L+S
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
+ G +A Y +M PD ++ L+ LC G++ EA + + V + D
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
+ +I K G + + + + D V + +R GR A F +
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI-ELSDRNFLNLCNFPCRSD 575
++ + C+ ++ + +E +L +I E + NL R D
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 576 AYYSTSNLLAEMREMG-LLPAKALHAL-------SSDKYAESL 610
A L +++ +L AK AL ++ AESL
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESL 504
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 40/321 (12%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPN 176
L++ L + G Q +H+M G P+ + N + A+ + G + QQ +
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG-------MMQQSK--- 361
Query: 177 FFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
L H ML P+ T ++ F + LL A +
Sbjct: 362 ------KLLH----------------EMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT-GCSPNVVTYTTLIKAYME 295
+ L + V LI CQ G A LL ++ G TY LI++
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+ + +A L +++ D + LI C + GR+++A + + ++PD +
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 356 LTSWLSMICQSRMFD----LLPEPALVFRYIDPDLVFCNALLSYLVKAGHP-SDAAEFYD 410
+ + C+ FD LL A+ FR DP+ N+L+ + + G A E +
Sbjct: 520 CGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESY--NSLVKAVCETGCGYKKALELQE 577
Query: 411 LMIELGFAPDKYSFAVLLSAL 431
M LGF P++ + L+ L
Sbjct: 578 RMQRLGFVPNRLTCKYLIQVL 598
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 173/377 (45%), Gaps = 10/377 (2%)
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
FS + +LI + +LG + A ++L + G +PNV++YT L+++Y + +A +
Sbjct: 144 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 203
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL---SKQNIQPDPYTLTSWLSM 362
F M+S+G P + + +++ + + ++A VF +L K ++PD + M
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 363 ICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
++ ++ + ++V + + V N+L+S+ + ++ YD M PD
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPD 320
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
S+A+L+ A A + EA+ V+ + + + + +++ +G A TVFK
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
+ D +Y + A + + A F+ ++K +G +PN T ++ + K
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 541 DLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP-AKALH 599
D++K+ ++ ++M S I+ + + + R + S EM G+ P KA +
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 500
Query: 600 A-LSSDKYAESLEEKYE 615
LS + LEE E
Sbjct: 501 VLLSLASTQDELEEAKE 517
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 169/451 (37%), Gaps = 81/451 (17%)
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
FL+L+ + G + + G PN + M+++ R G + A +F+++Q
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 174 ----PPNFFTFDITL--FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
P+ T+ I L F + + P+ +H ++ + K
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+A ++ MV G+ S + L+ +K+ M + P+VV+Y
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYA 325
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
LIKAY + R +A ++F M AG P +N+L+D + +G + A VF+S+ +
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
I PD ++ T+ +LS V A A +
Sbjct: 386 RIFPDLWSYTT---------------------------------MLSAYVNASDMEGAEK 412
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
F+ + GF P+ ++ L+ A + + ++VY +S + + I T I+
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD--- 469
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
A G C S A +Y +M+ G+ P+
Sbjct: 470 ---------------------------ASGRCKNFGS-----ALGWYKEMESCGVPPDQK 497
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
N++L + +L++ KE+ G R E
Sbjct: 498 AKNVLLSLASTQDELEEA----KELTGIRNE 524
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 209/520 (40%), Gaps = 54/520 (10%)
Query: 57 ALSCFFWSSQRRR-DHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
AL F W+ + H T M+ +LG +++ + + ILL + G + + F+
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHA-RCILLDMPEKGVPW--DEDMFV 189
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP 175
+L+ +AG+ + + +M+ G + N R G +A F
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFN----- 244
Query: 176 NFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQL 235
+M+ P +T++ +L FF L A +
Sbjct: 245 ---------------------------KMVSEGVEPTRHTYNLMLWGFFLSLRLETALRF 277
Query: 236 LGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYME 295
M GI + +I+ C+ +D A KL M P+VV+YTT+IK Y+
Sbjct: 278 FEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLA 337
Query: 296 SNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+RV D +F MRS+G P+ ++ L+ AG+ +A + +++ ++I P +
Sbjct: 338 VDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 356 LTSWLSMICQSRMFDLLPE----PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
+ L ++ QS+ D+ A+ + + L+ KA + A + D
Sbjct: 398 IFLKL-LVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDT 456
Query: 412 MIE----------LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
+IE L P Y+ ++ LC G+ +A ++R +M D
Sbjct: 457 LIEKEIILRHQDTLEMEPSAYN--PIIEYLCNNGQTAKAEVLFR-QLMKRGVQDQDALNN 513
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
+I K G + + K R P ++ AY + I + + G DA T D M E+G
Sbjct: 514 LIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDG 573
Query: 522 LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
P++ ++ + +++ +Q ++++ MI + + D
Sbjct: 574 HVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIED 613
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M E G D+ F VL+ + AG + E+VK+++ E + + + +++ G+
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
Y+MA F + V Y + + S R A F++ MK G+ P+ T N
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
M+ F + K + + ++ EM G++I S ++ + D + EMR G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 592 LLP 594
+ P
Sbjct: 356 IEP 358
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 102/561 (18%), Positives = 216/561 (38%), Gaps = 99/561 (17%)
Query: 96 ILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDA 155
I +++ +G + + S+ L +++ R G + M + +++M S G P NL +
Sbjct: 207 IFQKMKDLG--VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 156 HFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH---YYPN 212
F L AL F+ ++ D T + N K + M P+
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPS 324
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
++ +++ + +D + + ++ M GI+ + ++ L+ C G + A +L+
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 273 NMLHTGCSP-NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
NM+ +P + + L+ + ++ + A+ + M + + + VLI+ KA
Sbjct: 385 NMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 332 GRHQDALGVFRSLSKQNI--------QPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI- 382
+ A+ + +L ++ I + +P + +C + + ++FR +
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQ---TAKAEVLFRQLM 501
Query: 383 ---------------------DPDLVF--------------CNA----LLSYLVKAGHPS 403
+PD + NA + SY+ K G P
Sbjct: 502 KRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSK-GEPG 560
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY------------------- 444
DA D M+E G PD F ++ +L G++ A +V
Sbjct: 561 DAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAK 620
Query: 445 -------RGGVMSSQETDARI-------HTVIIVELI----KAGKYLMAATVFKQAVVRK 486
RG V +E RI HT + L+ + GK + A + + R
Sbjct: 621 ILEALLMRGHV---EEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERD 677
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
L+ +Y + ALL +G+T +A + ++ E G + + + ++ + +E + ++ +
Sbjct: 678 LSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQAD 737
Query: 547 QMLKEMIGSRIELSDRNFLNL 567
+L MI + +N ++L
Sbjct: 738 -VLSRMIKKGQGIKKQNNVSL 757
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 130/318 (40%), Gaps = 39/318 (12%)
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
T+ +IK E +++ A + M G D ++ VLI+ + KAG Q+++ +F+ +
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHP 402
++ + S +I + + + +V ++P N +L +
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
A F++ M G +PD +F +++ C K+ EA K++
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLF------------------ 313
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
VE+ K K + +V V+Y I L R D +++M+ +G+
Sbjct: 314 -VEM-KGNK--IGPSV-------------VSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Query: 523 KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN-FLNLCNFPCRSDAYYSTS 581
+PNA T + +L + + +LK M+ I D + FL L ++ + +
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAAT 416
Query: 582 NLLAEMREMGLLPAKALH 599
+L M + +PA+A H
Sbjct: 417 EVLKAMATLN-VPAEAGH 433
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 163/354 (46%), Gaps = 8/354 (2%)
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
FS + +LI + +LG + A ++L + G +PNV++YT L+++Y + +A +
Sbjct: 137 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 196
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL---SKQNIQPDPYTLTSWLSM 362
F M+S+G P + + +++ + + ++A VF +L K ++PD + M
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 363 ICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
++ ++ + ++V + + V N+L+S+ + ++ YD M PD
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPD 313
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
S+A+L+ A A + EA+ V+ + + + + +++ +G A TVFK
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
+ D +Y + A + + A F+ ++K +G +PN T ++ + K
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 541 DLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
D++K+ ++ ++M S I+ + + + R + S EM G+ P
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 169/451 (37%), Gaps = 81/451 (17%)
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
FL+L+ + G + + G PN + M+++ R G + A +F+++Q
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 174 ----PPNFFTFDITL--FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
P+ T+ I L F + + P+ +H ++ + K
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+A ++ MV G+ S + L+ +K+ M + P+VV+Y
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYA 318
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
LIKAY + R +A ++F M AG P +N+L+D + +G + A VF+S+ +
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
I PD ++ T+ +LS V A A +
Sbjct: 379 RIFPDLWSYTT---------------------------------MLSAYVNASDMEGAEK 405
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
F+ + GF P+ ++ L+ A + + ++VY +S + + I T I+
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD--- 462
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
A G C S A +Y +M+ G+ P+
Sbjct: 463 ---------------------------ASGRCKNFGS-----ALGWYKEMESCGVPPDQK 490
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
N++L + +L++ KE+ G R E
Sbjct: 491 AKNVLLSLASTQDELEEA----KELTGIRNE 517
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 166/370 (44%), Gaps = 23/370 (6%)
Query: 68 RRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMH 127
RRD + T+ M+ +GR+ K +A+ L E I LT N + L+++L + M
Sbjct: 267 RRDEYTYTI--MIRTMGRIG---KCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 128 AMFFQAYHQMQSYGFVPNTFARNLFMD---AHFRIGNLHLALTVFQQIQPPNFFTFDI-T 183
Q + +M G PN + +L ++ A ++ L + + ++ +++ + T
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRT 381
Query: 184 LFHLSNXXXXXXXXXXXXKRMLRMHYYP---NANTFHSLLNAFFKMDALLEAYQLLGLMV 240
L L + + M +P +++ S+L + +EA ++L +
Sbjct: 382 LSKLGHVSEAH-------RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 241 VLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVT 300
G+ ++ + +L + + L + M G SP++ TY LI ++ V
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 301 DASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
+A N+F + + PD++ +N LI+C K G +A F+ + ++ + PD T ++ +
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 361 SMICQSRMFDL---LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
++ ++ L E LV + P++V N LL L K G ++A + Y M + G
Sbjct: 555 ECFGKTERVEMAYSLFEEMLV-KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 418 APDKYSFAVL 427
PD ++ VL
Sbjct: 614 TPDSITYTVL 623
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 156/350 (44%), Gaps = 22/350 (6%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N+ T+ LL A+ + +A+ + + G + + + +L+ L + A ++
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVF 258
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
++M C + TYT +I+ + +A LFN M + G T ++V +N L+ +K
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSM-ICQSRMFDLLPEPALVFRYIDPDLVFCN 390
A+ VF + + +P+ YT + L++ + + ++ L + RY+
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM------TQ 372
Query: 391 ALLSYLV----KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV----K 442
+ SYLV K GH S+A + M ++ S+ +L +LC AGK EA+ K
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
++ GV+ TD ++ + L K + +F++ D Y + I +
Sbjct: 433 IHEKGVV----TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
R G +A +++++ + KP+ + N ++ K D+ + + KEM
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 162/392 (41%), Gaps = 28/392 (7%)
Query: 109 KNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
++ ++ +++R + R G +++M + G N N M + + A+ V
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 169 FQQIQP----PNFFTFDITLFHL--SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
F ++ PN +T+ + L L KR Y + L+
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR------YMTQGIYSYLVRT 381
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
K+ + EA++L M ++ + + ++ C G A ++L + G +
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD 441
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
+ Y T+ A + +++ +LF M+ G +PD+ +N+LI + G +A+ +F
Sbjct: 442 TMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----IDPDLVFCNALLSYLV 397
L + + +PD + S ++ + ++ D E + F+ ++PD+V + L+
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVD---EAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
K A ++ M+ G P+ ++ +LL L G+ EAV +Y D+
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
+TV+ + L + + K + RK P+
Sbjct: 619 TYTVL--------ERLQSVSHGKSRIRRKNPI 642
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 172/424 (40%), Gaps = 46/424 (10%)
Query: 145 NTFARNLFMDAHFRIGNLHLALTVFQQIQPP----NFFTFDITLFHLSNXXXXXXXXXXX 200
N+F + A+ R + A V+ +I+ + F +++ L L+
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDM 261
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
KR R Y T+ ++ ++ EA L M+ G+ +V + L+ +
Sbjct: 262 KKRHCRRDEY----TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK 317
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLI-------------------KAYMESN---- 297
++D A ++ M+ TGC PN TY+ L+ K YM
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSY 377
Query: 298 ---------RVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
V++A LF M S + + +++ AG+ +A+ + + ++
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 349 IQPDPY---TLTSWLSMICQ-SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSD 404
+ D T+ S L + Q S + DL + + PD+ N L++ + G +
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEK--MKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
A ++ + PD S+ L++ L G + EA ++ D ++ ++
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 465 ELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP 524
K + MA ++F++ +V+ + V Y + + L ++GRT +A Y +MK+ GL P
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 525 NAHT 528
++ T
Sbjct: 616 DSIT 619
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 19/264 (7%)
Query: 152 FMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYP 211
+ HF L A++VF+ IQ PN ++ T+F M+ + P
Sbjct: 76 ILSPHFE--GLPYAISVFKTIQEPNLLIWN-TMFRGHALSSDPVSALKLYVCMISLGLLP 132
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N+ TF +L + K A E Q+ G ++ LG + V T LI + Q G L+ A+K+
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
H +VV+YT LIK Y + +A LF+ + D+V WN +I +++
Sbjct: 193 DKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAET 244
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDL 386
G +++AL +F+ + K N++PD T+ + +S QS +L + V +ID +L
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ---VHLWIDDHGFGSNL 301
Query: 387 VFCNALLSYLVKAGHPSDAAEFYD 410
NAL+ K G A ++
Sbjct: 302 KIVNALIDLYSKCGELETACGLFE 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 354 YTLTSWLSMICQSRMFDLLPEPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFYDLM 412
Y L+ + S F+ LP VF+ I +P+L+ N + + P A + Y M
Sbjct: 66 YALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM 125
Query: 413 IELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS-SQETDARIHTVIIVELIKAGK 471
I LG P+ Y+F +L + CA K ++ + G V+ + D +HT +I ++ G+
Sbjct: 126 ISLGLLPNSYTFPFVLKS-CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
A VF ++ R D V+Y I G +A +D++ + + N
Sbjct: 185 LEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNA 236
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRI 557
M+ + + + ++ ++ K+M+ + +
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNV 262
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXX 191
Q + + +GF N N +D + + G L A +F+++ + +++ TL
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN-TLIGGYTHM 345
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMV---VLGIQFSV 248
+ MLR PN T S+L A + A+ + + + + + + G+ +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI-DIGRWIHVYIDKRLKGVTNAS 404
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
++ T LI + + G ++ A+++ ++LH S ++ +I + R + +LF+
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSR 460
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
MR G PD + + L+ S +G +FR++++ Y +T L M
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD------YKMTPKLEH--YGCM 512
Query: 369 FDLLPEPAL--------VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
DLL L ++PD V +LL G+ F + +I++ P+
Sbjct: 513 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI--EPE 570
Query: 421 KYSFAVLLSALCA-AGKIYEAVK---------VYRGGVMSSQETDARIHTVII 463
VLLS + A AG+ E K + + SS E D+ +H II
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/536 (20%), Positives = 215/536 (40%), Gaps = 62/536 (11%)
Query: 74 VTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQA 133
VT + ++ V G++ R + + +L ++ S G L + + +L R G+ +
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKG--LKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX 193
+ +++S G+ P T N + + G AL+V ++++ +
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA-------------- 349
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
++ T++ L+ A+ + EA ++ +M G+ + +T
Sbjct: 350 ------------------DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
+I + + G D A KL +M GC PN TY ++ + +R + + M+S G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM-------ICQS 366
+P+ WN ++ G + VFR + +PD T + +S + S
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 367 RMFDLLPEP---ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
+M+ + A V Y NALL+ L + G M GF P + S
Sbjct: 512 KMYGEMTRAGFNACVTTY--------NALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQ--ETDARIHTVIIVEL---IKAGKYLMAATV 478
++++L A G Y ++ + Q + + T+++ AG A T+
Sbjct: 564 YSLMLQCY-AKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE-RAFTL 621
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
FK+ Y D V + + R+ A + ++E+GL P+ T N ++ + +
Sbjct: 622 FKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 539 EKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
+ K ++LK + S+++ ++ + CR +L+EM E G+ P
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 141/338 (41%), Gaps = 19/338 (5%)
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
VA KLL + +V YTT++ AY + + A +LF M+ G +P LV +NV++
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 326 DCHSKAGRH-QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-- 382
D K GR + LGV + + ++ D +T ++ LS + LL E F +
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACARE---GLLREAKEFFAELKS 309
Query: 383 ---DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
+P V NALL KAG ++A M E D ++ L++A AG E
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 440 AVKVY----RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
A V + GVM +A +T +I KAGK A +F + Y
Sbjct: 370 AAGVIEMMTKKGVMP----NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK-VNQMLKEMIG 554
+ L + R+ + MK NG PN T N ML K + K VN++ +EM
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKS 484
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
E F L + R + S + EM G
Sbjct: 485 CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 195/489 (39%), Gaps = 14/489 (2%)
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP- 174
+ +RIL R +++ + ++ ++ + A + A+ R G A+ +F++++
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 175 ---PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
P T+++ L M + T ++L+A + L E
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
A + + G + + L+ + G+ A +L+ M C + VTY L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
AY+ + +A+ + M G P+ + + +ID + KAG+ +AL +F S+ + P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 352 DPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
+ T + LS++ + + M +L + + P+ N +L+ G
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCD--MKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT--VIIVE 465
+ M GF PD+ +F L+SA G +A K+Y G M+ +A + T ++
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY--GEMTRAGFNACVTTYNALLNA 535
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
L + G + V + + +Y++ + + G +++KE + P+
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLA 585
+L +K + L + + F ++ + R++ Y +L
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 586 EMREMGLLP 594
+RE GL P
Sbjct: 656 SIREDGLSP 664
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 163/423 (38%), Gaps = 74/423 (17%)
Query: 57 ALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLL 116
AL F+ + + T + ++ +LG+ +R ++ ++ +L ++S GC + N ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK-MLCDMKSNGC--SPNRATWNT 461
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPN 176
+L + GM + + +M+S GF P+ N + A+ R G+ A ++ ++
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 177 FFTFDITLFHLSNXXXXXX--------------------------------------XXX 198
F T L N
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 199 XXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKH 258
R+ +P+ +LL A FK AL + + L G + + ++ ++
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 259 CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDL 318
+ + D A +L+++ G SP++VTY +L+ Y+ A + + + PDL
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 319 VLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALV 378
V +N +I + G Q+A+ + ++++ I+P +T +++S MF +
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI------ 755
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
D++ C M + P++ +F +++ C AGK
Sbjct: 756 -----EDVIEC----------------------MAKNDCRPNELTFKMVVDGYCRAGKYS 788
Query: 439 EAV 441
EA+
Sbjct: 789 EAM 791
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 25/321 (7%)
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDAS-NLF 306
V V IL+ ++ L++A K +NM G P V + LIKA ++ DA +F
Sbjct: 125 VTVLAILVEEN----QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
M G PD + LI + GR +A +F + +++ P T TS ++ +C S
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 367 RMFD----LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
+ D L E + + I+P++ ++L+ L K G A E +++M+ G P+
Sbjct: 241 KNVDEAMRYLEE--MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
++ L++ LC KI EAV++ + + DA ++ +I K+ AA +
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 483 VVRKYPLDNVAYAV----------GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
++ + + + + G+CA S A T Y M+ G+ T +
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLCANYPS----RAFTLYLSMRSRGISVEVETLESL 414
Query: 533 LFTFYKEKDLQKVNQMLKEMI 553
+ K+ + QK Q++ E++
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIV 435
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 18/246 (7%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVL-----GIQFSVNVWTILIH 256
K M + P + + L+ A + D ++A GL + L G + LI
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDA----GLKIFLEMPKRGCDPDSYTYGTLIS 200
Query: 257 KHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTP 316
C+ G +D A KL M+ C+P VVTYT+LI S V +A M+S G P
Sbjct: 201 GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 317 DLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE-- 374
++ ++ L+D K GR A+ +F + + +P+ T T+ ++ +C+ + E
Sbjct: 261 NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL 320
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV-------L 427
+ + + PD ++S +AA F D MI G P++ ++ + +
Sbjct: 321 DRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEV 380
Query: 428 LSALCA 433
+ LCA
Sbjct: 381 VRGLCA 386
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 124/323 (38%), Gaps = 46/323 (14%)
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
++ M C P+ Y T++ +E N++ A + +MR G P + NVLI
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 329 SKAGRHQDA-LGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLV 387
+ DA L +F + K+ PD YT
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTY------------------------------- 195
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
L+S L + G +A + + M+E AP ++ L++ LC + + EA++
Sbjct: 196 --GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
E + ++ ++ L K G+ L A +F+ + R + V Y I L + +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI---------- 557
+A D+M GLKP+A ++ F ++ L EMI I
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 558 -ELSDRNFLNLC-NFPCRSDAYY 578
+ S+ LC N+P R+ Y
Sbjct: 374 VKTSNEVVRGLCANYPSRAFTLY 396
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 131/332 (39%), Gaps = 50/332 (15%)
Query: 84 GRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFV 143
GR+ R +L+ + +++ C + +++ +L IL + F+ Y M+ G
Sbjct: 97 GRVHRPFDSLR-VFHKMKDFDC--DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLP 153
Query: 144 PNTFARNLFMDAHFR-IGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXX 198
P + N+ + A R G + L +F ++ P+ +T+ + L
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 199 XXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKH 258
+ M+ P T+ SL+N + EA + L M GI+ +V ++ L+
Sbjct: 214 LFTE-MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 259 CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA---------------- 302
C+ G A +L + M+ GC PN+VTYTTLI + ++ +A
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Query: 303 -------------------SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH------QDA 337
+N + M G TP+ + WN+ + ++ R A
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRA 392
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
++ S+ + I + TL S + +C+ F
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 1/219 (0%)
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA-AGKIYEAV 441
DP +L+ LV+ + A +FY M E+G P S VL+ ALC G + +
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
K++ + D+ + +I L + G+ A +F + V + V Y I L
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
S +A + ++MK G++PN T + ++ K+ + ++ + M+ +
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHA 600
+ L C+ LL M GL P L+
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 195/457 (42%), Gaps = 44/457 (9%)
Query: 148 ARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
+R M+ G H A TVF+ + P+ ++ TL
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISY-TTLLAAMTVQKQYGSISSIVSE 105
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
+ + ++ F++++NAF + + +A Q L M LG+ + + + LI + G
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 264 LDVANKLLQNMLHTG---CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
+ +++LL ML G PN+ T+ L++A+ + +V +A + M G PD V
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 321 WNVLIDCHSKAGR--HQDALGVFRSLSKQNIQPDPYTLTSWLSMIC-QSRMFDLLPEPAL 377
+N + C+ + G ++ V + + K+ +P+ T + C + R+ D L
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL---RF 282
Query: 378 VFRY----IDPDLVFCNALLSYLVK-------------------------AGHPSDAAEF 408
V R ++ +LV N+L++ V+ G+ +
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQV 342
Query: 409 YDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIK 468
LM E D +++ +++A +AG + +A +V++ V + + DA ++++ ++
Sbjct: 343 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 402
Query: 469 AGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
A + A + + +V P + V + I +G DA +++M + G+ PN T
Sbjct: 403 AKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
Query: 529 CNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFL 565
+++ + + K K ++L+ M G ++ + FL
Sbjct: 462 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFL 498
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 110/273 (40%), Gaps = 7/273 (2%)
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
V + T L+ +E R +A +F + GH P L+ + L+ + ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVFCNALLSYLVKAG 400
+ + + D + ++ +S + + L + ++P N L+ AG
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 401 HPSDAAEFYDLMIELG---FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
P ++E DLM+E G P+ +F VL+ A C K+ EA +V + D
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC--ALLRSGRTPDACTFYD 515
+ I ++ G+ + A + + +V K GI R GR D F
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 516 QMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQM 548
+MKE ++ N N ++ F + D ++++
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 150/382 (39%), Gaps = 32/382 (8%)
Query: 75 TVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAY 134
T + ++ G + ++ + + L LE + N +F +L++ + ++
Sbjct: 152 TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALT------VFQQIQPPNFFTFDITLFHLS 188
+M+ G P+T N + + G A + V ++ PN T I +
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM---DALLEAYQLLGLMVVLGIQ 245
+RM M N F+SL+N F ++ D + E L LM
Sbjct: 272 REGRVRDGLRFV-RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLM------ 324
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
S N L+ G + ++L M +V+TY+T++ A+ + + A+ +
Sbjct: 325 -SFNEEVELV------GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
F M AG PD +++L + +A + A + +L ++ +P+ T+ +S C
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS 436
Query: 366 SRMFDLLPEPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
+ D + VF + P++ L+ ++ P A E +M G P+
Sbjct: 437 NGSMD---DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 493
Query: 421 KYSFAVLLSALCAAGKIYEAVK 442
+F +L A AG E+ K
Sbjct: 494 NSTFLLLAEAWRVAGLTDESNK 515
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M++ P+A+ + L + + +A +LL ++V + +V ++T +I C
Sbjct: 379 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSN 437
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G +D A ++ M G SPN+ T+ TL+ Y+E + A + MR G P+ +
Sbjct: 438 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
+L + AG ++ +L ++I+
Sbjct: 498 LLLAEAWRVAGLTDESNKAINALKCKDIE 526
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 34/341 (9%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ LLN+ K +++ MV LG+ +++V+ +L+H + G + A KL
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M G P++ TY TLI Y + + +A ++ + M +G P++V +N I S+
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCN 390
GR ++A +FR + K ++ + T T+ + C RM D+
Sbjct: 286 EGRMREATRLFREI-KDDVTANHVTYTTLIDGYC--RMNDI------------------- 323
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
+A ++M GF+P ++ +L LC G+I EA ++
Sbjct: 324 ------------DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
E D +I K + A V K+ + LD +Y I + +A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKE 551
M E G P T + ++ FY + ++ ++L+E
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 166/416 (39%), Gaps = 22/416 (5%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVP---------NTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
+AGM + Q++S G P N+ + D ++I + L V I
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 174 PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAY 233
N L H + M +P+ T+++L++ + K EA
Sbjct: 205 VYN------VLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL 258
Query: 234 QLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAY 293
+ M G+ ++ + IH + G + A +L + + + N VTYTTLI Y
Sbjct: 259 SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGY 317
Query: 294 MESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDP 353
N + +A L M S G +P +V +N ++ + GR ++A + +S + I+PD
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 354 YTLTSWLSMICQSRMFDLLPEPALVFRYIDP----DLVFCNALLSYLVKAGHPSDAAEFY 409
T + ++ C ++ D++ + + I+ D+ AL+ K +A E
Sbjct: 378 ITCNTLINAYC--KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL 435
Query: 410 DLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKA 469
MIE GF+P +++ L+ K E K+ D ++ +I + K
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKL 495
Query: 470 GKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
+ A +F+ + D+V + A R+G+ +A +D M L N
Sbjct: 496 EQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDAS-NLFN 307
+V++ L+ + + G+++ + + + + G P++ T L+ + ++ R+TD +F
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK-QRLTDTVWKIFK 192
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
M G ++ ++NVL+ SK+G + A + + ++ + PD +T + +S+ C+
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 368 M-FDLLPEPALVFRY-IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
M F+ L + R + P++V N+ + + G +A + I+ + ++
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYT 311
Query: 426 VLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR 485
L+ C I EA+++ + +M + F V
Sbjct: 312 TLIDGYCRMNDIDEALRL---------------------------REVMESRGFSPGV-- 342
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
V Y + L GR +A +M ++P+ TCN ++ + K +D+
Sbjct: 343 ------VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 546 NQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDK 605
++ K+MI S ++L ++ L + C+ + L M E G P A ++ D
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 606 Y 606
+
Sbjct: 457 F 457
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 179/406 (44%), Gaps = 14/406 (3%)
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
+R+ P+ T+++L+ + + + EAY + M GI+ V + LI + +L
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH-MRSAGHTPDLVLWNV 323
+ +L MLH+G SP++ +Y TL+ Y + R +A + + + AG P + +N+
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNI 159
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM---FDLLPEPALVFR 380
L+D K+G +A+ +F+ L K ++P+ T ++ +C+SR D +
Sbjct: 160 LLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
Y P+ V +L K + + M + G+ D ++ ++SAL G+ EA
Sbjct: 219 YT-PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
Query: 441 VKVYRGGVMS-SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
+ V S ++ D + ++ K G + ++ ++ D+ + + +
Sbjct: 278 YECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVN 337
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIEL 559
LL G T A + E G++P+ TCN ++ K + + ++ M E+
Sbjct: 338 GLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM-----EV 392
Query: 560 SDR-NFLNLCNFPCRSDAYYSTSNLLAEMREMGL-LPAKALHALSS 603
D + ++ + C+ S LL G+ +P+ A A+ S
Sbjct: 393 RDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLS 438
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 160/364 (43%), Gaps = 9/364 (2%)
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
GLM GI S + I ++ C+ L+ A LL + + G P+V+TY TLIK Y
Sbjct: 4 GLMKFPGI--STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRF 61
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT- 355
+ +A + MR AG PD+ +N LI +K L +F + + PD ++
Sbjct: 62 IGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSY 121
Query: 356 ---LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLM 412
++ + + F +L E + + P + N LL L K+GH +A E +
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLV-PGIDTYNILLDALCKSGHTDNAIELFK-H 179
Query: 413 IELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKY 472
++ P+ ++ +L++ LC + ++ + R S +A +T ++ K +
Sbjct: 180 LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRI 239
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP-NAHTCNM 531
+F + Y D A + AL+++GR +A ++ +G + + + N
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
+L ++K+ +L V+ +L+E+ ++ D + N LA + EMG
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 592 LLPA 595
+ P+
Sbjct: 360 MQPS 363
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 130/336 (38%), Gaps = 43/336 (12%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQ-MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ 171
S+ L+ ++ G H F+ H+ + G VP N+ +DA + G+ A+ +F+
Sbjct: 120 SYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH 179
Query: 172 IQ---PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
++ P T++I + L + + + Y PNA T+ ++L +FK
Sbjct: 180 LKSRVKPELMTYNILINGLCKSRRVGSVDWMM-RELKKSGYTPNAVTYTTMLKMYFKTKR 238
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGC-SPNVVTYT 287
+ + QL M G F ++ + G + A + + ++ +G S ++V+Y
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
TL+ Y + + +L + G PD ++++ G A + +
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEM 358
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
+QP +V CN L+ L KAGH A
Sbjct: 359 GMQP---------------------------------SVVTCNCLIDGLCKAGHVDRAMR 385
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
+ M D++++ ++ LC G++ A K+
Sbjct: 386 LFASM----EVRDEFTYTSVVHNLCKDGRLVCASKL 417
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 161/408 (39%), Gaps = 75/408 (18%)
Query: 51 RSSDLIALSCFFWSSQRRRDHQSVTVDHMVPVL--GRLTRRHKTLQAILLQLESIGCILT 108
+S L+A F ++SQ+ S + H++ +L GR R + +L + S G LT
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRS-SHLILILKLGR-GRYFNLIDDVLAKHRSSGYPLT 118
Query: 109 KNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHF-RIGNLHLALT 167
F L+++ A + +++M + F P N +D G L A
Sbjct: 119 GE--IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176
Query: 168 VFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMH-YYPNANTFHSLLNAFFKM 226
+F+ R+H PN +++ L+ AF
Sbjct: 177 LFKSS---------------------------------RLHGVMPNTRSYNLLMQAFCLN 203
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
D L AYQL G M+ + V+ + ILI C+ G ++ A +LL +ML+ G P+ ++Y
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
TTL+ + ++ +A L M+ G PDLV +N +I + R DA V +
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 347 QNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
P+ + + + +C MFD +
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFD---------------------------------EGK 350
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
++ + MI GF+P L+ C+ GK+ EA V VM + ET
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE-VVMKNGET 397
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 5/238 (2%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFH 186
F+ + + +G +PNT + NL M A +L +A +F ++ P+ ++ I +
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
ML + P+ ++ +LLN+ + L EAY+LL M + G
Sbjct: 235 FCRKGQVNGAMELLDD-MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ + +I C+ A K+L +ML GCSPN V+Y TLI + +
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
M S G +P + N L+ G+ ++A V + K T + +IC
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 102/254 (40%), Gaps = 3/254 (1%)
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC-HSKAGRHQDALGVFRSL 344
+T LIK Y E+ + F M TP N ++D S G Q A +F+S
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHP 402
+ P+ + + C + + + ++ R + PD+ L+ + G
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
+ A E D M+ GF PD+ S+ LL++LC ++ EA K+ + D + +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
I+ + + + A V + ++V+Y I L G + + ++M G
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 523 KPNAHTCNMMLFTF 536
P+ N ++ F
Sbjct: 362 SPHFSVSNCLVKGF 375
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 164/429 (38%), Gaps = 8/429 (1%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX 190
F+ M++ G PN N + A + G + A ++ +++ PN TF+I + N
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNE 261
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
K + + P+ T ++ + EA ++L + G + V
Sbjct: 262 QKLIQSMVLLEK-CFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
L+ +C LG + VA + M G PNV TY LI Y + + A + FN M+
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI----QPDPYTLTSWLSMICQS 366
+ + +N LI S GR D L + + + + DPY + ++
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIY-GFYKEN 439
Query: 367 RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
R D L E L + P V + L L + G D YD MI G P
Sbjct: 440 RWEDAL-EFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHC 498
Query: 427 LLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK 486
L+ GKI E++++ V + +I+ K K + + R
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERG 558
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
D +Y + L G A + +M E + P+ + ++F ++ + VN
Sbjct: 559 CVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIH-VN 617
Query: 547 QMLKEMIGS 555
L+++I S
Sbjct: 618 SSLQDIIQS 626
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 176/417 (42%), Gaps = 28/417 (6%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ F +++ F + + ++ L+ GI+ S+ V+ ++ + I D+A +
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDI-DIAREF 168
Query: 271 L-QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+ M+ +G +V TY L+K +NR+ D L M+++G P+ V++N L+
Sbjct: 169 FTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALC 228
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD---LLPEPALVFRYIDPDL 386
K G+ +G RSL + +P+ T +S C + +L E ++ PD+
Sbjct: 229 KNGK----VGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV-PDV 283
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA----VK 442
V ++ L G S+A E + + G D + L+ CA GK+ A ++
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
+ R G + + ET + ++I G A F + + I L
Sbjct: 344 MERKGYLPNVET----YNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399
Query: 503 RSGRTPDACTFYDQMKEN----GLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
GRT D + M+++ G + + + C +++ FYKE + + L +M
Sbjct: 400 IGGRTDDGLKILEMMQDSDTVHGARIDPYNC--VIYGFYKENRWEDALEFLLKMEKLFPR 457
Query: 559 LSDRNF--LNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKAL-HALSS-DKYAESLE 611
DR+F ++LC D + ++ E ++ + L H S K ESLE
Sbjct: 458 AVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 142/360 (39%), Gaps = 24/360 (6%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN TF+ L++A+ L+++ LL LG V T ++ C G + A ++
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L+ + G +VV TL+K Y ++ A F M G+ P++ +N+LI +
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 331 AGRHQDALGVFRSLSKQNIQ---PDPYTLTSWLSMICQS----RMFDLLPEPALVF-RYI 382
G AL F + I+ TL LS+ ++ ++ +++ + V I
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
DP N ++ K DA EF M +L P + L +LC G + +
Sbjct: 426 DP----YNCVIYGFYKENRWEDALEFLLKMEKL--FPRAVDRSFKLISLCEKGGMDDLKT 479
Query: 443 VY-----RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
Y GGV S + IH + GK + + V R Y + +
Sbjct: 480 AYDQMIGEGGVPSIIVSHCLIH-----RYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I + + + F + M E G P+ + N +L + D+QK + M+ I
Sbjct: 535 IIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTD 301
G S + + L HK C D +LL M + G P+ + T+I+ + + +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT---LTS 358
++ + + G P L ++N ++D K R + I D YT L
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 359 WLSMICQ-SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
LS+ + F LL + + P+ V N LL L K G A M E
Sbjct: 191 GLSLTNRIGDGFKLL--QIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE--- 245
Query: 418 APDKYSFAVLLSALCAAGKIYEAV----KVYRGGVMSSQETDARIHTVIIVELIKAGKYL 473
P+ +F +L+SA C K+ +++ K + G + T ++ V+ E G+
Sbjct: 246 -PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE----GRVS 300
Query: 474 MAATVFKQAVVRKYPLDNVA---YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCN 530
A V ++ + +D VA G CAL G+ A F+ +M+ G PN T N
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCAL---GKMRVAQRFFIEMERKGYLPNVETYN 357
Query: 531 MML 533
+++
Sbjct: 358 LLI 360
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 165/387 (42%), Gaps = 15/387 (3%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F + + L +AG +++ +G ++ + + +D ++G A+ +
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 173 Q-PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
+ PN F + L ++ + + + + P+ + ++++ + + +
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIF-QEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
A+Q G ++ G S+ TILI + G + A + +NM G +VVTY L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
Y +++++ L + MRSAG +PD+ +N+LI G +A + L ++ P
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAE 407
T + S+ D L F D PD+V C+ALL KA A
Sbjct: 547 STLAFTDVIGGF--SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
++ +++ G PD + L+ C+ G I +A ++ V + H +++ L
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL- 663
Query: 468 KAGKYLM-----AATVFKQAVVRKYPL 489
GK + A+ + ++ +V K+ L
Sbjct: 664 -EGKRFVNSETHASMLLEEIIVAKWHL 689
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 142/344 (41%), Gaps = 36/344 (10%)
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
+P+ SLL ++ L A + + M+ G + V ++ I K+C G D +
Sbjct: 233 FPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWE 292
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
LL M H G P++V +T I ++ + +A+++ ++ G + D V + +ID
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFC 389
K G+ ++A+ + S ++P+ + +S+LS IC +
Sbjct: 353 KVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICST----------------------- 386
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
G A+ + + ELG PD + ++ C G+ +A + + +
Sbjct: 387 ----------GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
S T++I + G A +VF+ LD V Y + ++ +
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
D+M+ G+ P+ T N+++ + + + N+++ E+I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 158/396 (39%), Gaps = 41/396 (10%)
Query: 137 MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXX 196
M+ YG P+ A +F+D + G L A +V F + LF +S
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL----------FKLKLFGISQ------- 339
Query: 197 XXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIH 256
++ + S+++ F K+ EA +L+ ++ ++ V++ +
Sbjct: 340 ---------------DSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLS 381
Query: 257 KHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTP 316
C G + A+ + Q + G P+ V YTT+I Y R A F + +G+ P
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
Query: 317 DLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLL 372
L +LI S+ G DA VFR++ + ++ D T + + ++ ++F+L+
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 373 PEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
E + I PD+ N L+ +V G+ +A E +I GF P +F ++
Sbjct: 502 DE--MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
G EA ++ + D + ++ KA + A +F + + D V
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
Y I G AC M + G+ PN T
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 165/387 (42%), Gaps = 15/387 (3%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F + + L +AG +++ +G ++ + + +D ++G A+ +
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 173 Q-PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
+ PN F + L ++ + + + + P+ + ++++ + + +
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIF-QEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
A+Q G ++ G S+ TILI + G + A + +NM G +VVTY L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
Y +++++ L + MRSAG +PD+ +N+LI G +A + L ++ P
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAE 407
T + S+ D L F D PD+V C+ALL KA A
Sbjct: 547 STLAFTDVIGGF--SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
++ +++ G PD + L+ C+ G I +A ++ V + H +++ L
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL- 663
Query: 468 KAGKYLM-----AATVFKQAVVRKYPL 489
GK + A+ + ++ +V K+ L
Sbjct: 664 -EGKRFVNSETHASMLLEEIIVAKWHL 689
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 142/344 (41%), Gaps = 36/344 (10%)
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
+P+ SLL ++ L A + + M+ G + V ++ I K+C G D +
Sbjct: 233 FPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWE 292
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
LL M H G P++V +T I ++ + +A+++ ++ G + D V + +ID
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFC 389
K G+ ++A+ + S ++P+ + +S+LS IC +
Sbjct: 353 KVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICST----------------------- 386
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
G A+ + + ELG PD + ++ C G+ +A + + +
Sbjct: 387 ----------GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
S T++I + G A +VF+ LD V Y + ++ +
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
D+M+ G+ P+ T N+++ + + + N+++ E+I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 158/396 (39%), Gaps = 41/396 (10%)
Query: 137 MQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXX 196
M+ YG P+ A +F+D + G L A +V F + LF +S
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL----------FKLKLFGISQ------- 339
Query: 197 XXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIH 256
++ + S+++ F K+ EA +L+ ++ ++ V++ +
Sbjct: 340 ---------------DSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLS 381
Query: 257 KHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTP 316
C G + A+ + Q + G P+ V YTT+I Y R A F + +G+ P
Sbjct: 382 NICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
Query: 317 DLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLL 372
L +LI S+ G DA VFR++ + ++ D T + + ++ ++F+L+
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 373 PEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
E + I PD+ N L+ +V G+ +A E +I GF P +F ++
Sbjct: 502 DE--MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
G EA ++ + D + ++ KA + A +F + + D V
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
Y I G AC M + G+ PN T
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM ++ P + + L+ A+ +++ + +A + ++V I + +TI+I+ +C+L
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLN 649
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
A L ++M P+VVTY+ L+ + E + + M + PD+V +
Sbjct: 650 EPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD-------MKREMEAFDVIPDVVYYT 702
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL------SMICQSRMFDLLPEPA 376
++I+ + + +F+ + ++ I PD T T L ++ + + FD
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFD------ 756
Query: 377 LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+ PD+ + L+ + K G +A +D MIE G PD + L++ C G
Sbjct: 757 -----VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ 481
+ EA ++ + S + D +T +I + G L A + K+
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKE 856
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 186/467 (39%), Gaps = 25/467 (5%)
Query: 82 VLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYG 141
++G + K A L +E G T + + +L L G+ F+ M++ G
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 142 FVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXX 201
P N+ ++ G L A ++ ++ + D ++
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN-DASMVK---GFCAAGCLDHAF 552
Query: 202 KRMLRMHYYPNANTFHSLLNAFF-KMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
+R +R+ + + + +L + + D + +A LL M LG++ +++ LI C+
Sbjct: 553 ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
+ + A + + ++ P++ TYT +I Y N A LF M+ PD+V
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPEPA 376
++VL++ + L + R + ++ PD T ++ C +++ L +
Sbjct: 673 YSVLLNSDPE-------LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD-- 723
Query: 377 LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+ R I PD+V LL + + F PD + + VL+ C G
Sbjct: 724 MKRREIVPDVVTYTVLLKNKPERNLSREMKAF-------DVKPDVFYYTVLIDWQCKIGD 776
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
+ EA +++ + S + DA +T +I K G A +F + + D V Y
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ 543
I R+G A +M E G+KP + + + + K K L+
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKGLR 883
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 164/448 (36%), Gaps = 70/448 (15%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXX 195
M+ +G P+ + + ++ H + N+ A+ VF
Sbjct: 316 DMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN------------------------- 350
Query: 196 XXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILI 255
+ML+ N S+L + +M EAY L I + +
Sbjct: 351 -------KMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAF 403
Query: 256 HKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT 315
+LG ++ A +L + M G +P+V+ YTTLI + +DA +L M G T
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT 463
Query: 316 PDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT-------------------- 355
PD+V++NVL + G Q+A + + + ++P T
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 356 -----------LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSD 404
S + C + D E + + P V+ S + + S
Sbjct: 524 YESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
A + D M +LG P+K + L+ A C + +A + + V D +T++I
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 465 ELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP 524
+ + A +F+ R D V Y+V LL S D +M+ + P
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSV----LLNSDPELD---MKREMEAFDVIP 696
Query: 525 NAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ +M+ + DL+KV + K+M
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDM 724
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 155/363 (42%), Gaps = 26/363 (7%)
Query: 243 GIQFSVNVWTILIHKHCQ-LGI---LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
GI V V++ +I H + + I +DV NK+L+ C V +++++ Y +
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC----VIVSSILQCYCQMGN 376
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
++A +LF R + D V +NV D K G+ ++A+ +FR ++ + I PD T+
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 359 WLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIE 414
+ C S FDL+ E + PD+V N L L G +A E +M
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGK--TPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 415 LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLM 474
G P + +++ L AG++ +A Y S+E DA +V+ A L
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS-----MVKGFCAAGCLD 549
Query: 475 AATVFKQAVVRKYPLDNVAY---AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
A F++ + ++PL Y +CA A D+M + G++P
Sbjct: 550 HA--FERFIRLEFPLPKSVYFTLFTSLCA--EKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 532 MLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
++ + + +++K + + ++ +I + + N CR + L +M+
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 592 LLP 594
+ P
Sbjct: 666 VKP 668
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 182/483 (37%), Gaps = 57/483 (11%)
Query: 129 MFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLS 188
+FF+AY+ S G P+ A N + G + + F +I+
Sbjct: 168 IFFRAYY---SLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE--------------- 209
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSV 248
R+ +A+T+ ++ A ++ D E +LL +++ +
Sbjct: 210 -----------------RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPC 252
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGC----SPNVVTYTTLIKAYMESNRVTDASN 304
+ I C + D+A LLQ + S + Y +++ R+ DA +
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
+ M G PD+ +++ +I+ H K A+ VF + K+ + + ++S L C
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 365 Q----SRMFDLLPEPALVFRY--IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
Q S +DL E FR I D V N L K G +A E + M G A
Sbjct: 373 QMGNFSEAYDLFKE----FRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIA 428
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
PD ++ L+ C GK +A + + + D I+ V+ L G A
Sbjct: 429 PDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFET 488
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
K R V + + I L+ +G A FY+ ++ + +A M+ F
Sbjct: 489 LKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCA 544
Query: 539 EKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTS-NLLAEMREMGLLPAKA 597
L + + I L + L C Y S + +LL M ++G+ P K+
Sbjct: 545 AGCL---DHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 598 LHA 600
++
Sbjct: 602 MYG 604
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 129/342 (37%), Gaps = 49/342 (14%)
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
A LL M G P Y LI A+ N V A F + + PDL + ++I+
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDL 386
+ + + A +F + +++++PD T + L+ DP+L
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS--------------------DPEL 683
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
+ E +D++ PD + ++++ C + + +++
Sbjct: 684 DMKREM--------------EAFDVI------PDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
D +TV++ K + ++ D Y V I + G
Sbjct: 724 MKRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN 566
+A +DQM E+G+ P+A ++ K L++ + MI S ++ +
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAE 608
L CR+ L+ EM E G+ P KA +LS+ YA+
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGIKPTKA--SLSAVHYAK 876
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 11/315 (3%)
Query: 159 IGNLH--LALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTF 216
I N+H L L V ++P + T DI + L K + H P+ T+
Sbjct: 140 ISNVHRVLNLMVNNGLEP-DQVTTDIAVRSLCETGRVDEAKDLM-KELTEKHSPPDTYTY 197
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVV-LGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
+ LL K L Y+ + M ++ + +TILI C L A L+ +
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
+ G P+ Y T++K + ++ ++A ++ M+ G PD + +N LI SKAGR +
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSR----MFDLLPEPALVFRYIDPDLVFCNA 391
+A +++ +PD T TS ++ +C+ LL E + R P+ N
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE--MEARGCAPNDCTYNT 375
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
LL L KA E Y++M G + +A L+ +L +GK+ EA +V+ V S
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSK 435
Query: 452 QETDARIHTVIIVEL 466
+DA ++ + L
Sbjct: 436 SLSDASAYSTLETTL 450
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 149/358 (41%), Gaps = 20/358 (5%)
Query: 224 FKMDALLEAYQLLGLMVVLG-IQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS-- 280
FK L +A L + I + ++ + + +++ KL Q++L + +
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 281 PNVVTYTTLIK--AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
P T+ L+ + +++ + N M + G PD V ++ + + GR +A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID---------PDLVFC 389
+ + L++++ PD YT L +C+ + DL +V+ ++D PDLV
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCK--DL----HVVYEFVDEMRDDFDVKPDLVSF 233
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
L+ + + + +A + GF PD + + ++ C K EAV VY+
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
E D + +I L KAG+ A K V Y D Y + + R G +
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A + ++M+ G PN T N +L K + + K ++ + M S ++L + L
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 25/323 (7%)
Query: 208 HYYPNANTFHSLLNAFFKM--DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
++ P +TF LL+ + ++ +++L LMV G++ I + C+ G +D
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA-GHTPDLVLWNVL 324
A L++ + P+ TY L+K + + + MR PDLV + +L
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 325 ID--CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY- 381
ID C+SK R +A+ + L +PD + + + C E V++
Sbjct: 237 IDNVCNSKNLR--EAMYLVSKLGNAGFKPDCFLYNTIMKGFC---TLSKGSEAVGVYKKM 291
Query: 382 ----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
++PD + N L+ L KAG +A + M++ G+ PD ++ L++ +C G+
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 438 YEAVKVY-----RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
A+ + RG + + +H + L+ G L + K + V+ L++
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE--MMKSSGVK---LESN 406
Query: 493 AYAVGICALLRSGRTPDACTFYD 515
YA + +L++SG+ +A +D
Sbjct: 407 GYATLVRSLVKSGKVAEAYEVFD 429
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 137/344 (39%), Gaps = 33/344 (9%)
Query: 295 ESNRVTDASNLFNHMRSAGHTP-DLVLWNVLIDCHSKAGRHQDALGVFRSL--SKQNIQP 351
+S ++DA +LFN + + P DL N ++ + D + +F+ + S+ N +P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 352 DPYTLTSWLSMICQS---------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
T LS C++ R+ +L+ V ++PD V + + L + G
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLM-----VNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK---IYEAVKVYRGGVMSSQETDARIH 459
+A + + E PD Y++ LL LC +YE V R + D
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF--DVKPDLVSF 233
Query: 460 TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV---GICALLRSGRTPDACTFYDQ 516
T++I + + A + + + D Y G C L + +A Y +
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS---EAVGVYKK 290
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDA 576
MKE G++P+ T N ++F K +++ LK M+ + E + +L N CR
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 577 YYSTSNLLAEMREMGLLPAKA-----LHALSSDKYAESLEEKYE 615
+LL EM G P LH L + + E YE
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 35/294 (11%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS-PNVVTYTTLIKAYMESNRVT 300
LG+Q + ++ IL+ HC+ G ++ A +++ M +G S PN +TY+TL+ +R
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 301 DASNLFNHMRSA-GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSW 359
+A LF M S G +PD V +NV+I+ +AG + A + + K P+ Y +
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS-- 307
Query: 360 LSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAP 419
AL++ K G +A + +D + + G
Sbjct: 308 -------------------------------ALMNGFCKVGKIQEAKQTFDEVKKTGLKL 336
Query: 420 DKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVF 479
D + L++ C G+ EA+K+ S D + VI+ L G+ A +
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 480 KQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
Q L+ +Y + + AL +G A F M E G+ P+ T N ++
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 128/308 (41%), Gaps = 15/308 (4%)
Query: 141 GFVPNTFARNLFMDAHFRIGNLHLALTVFQQ-----IQPPNFFTFDITLFHLSNXXXXXX 195
G PNT N+ + H + G+++ A V ++ I PN T+ + L
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 196 XXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILI 255
+ + P+ TF+ ++N F + + A ++L M G +V ++ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 256 HKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT 315
+ C++G + A + + TG + V YTTL+ + + +A L M+++
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 316 PDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEP 375
D + +NV++ S GR ++AL + + + + + L+ +C + E
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGEL----EK 426
Query: 376 ALVF------RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
A+ F R I P N L+ L ++G+ + +G P S+ ++
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Query: 430 ALCAAGKI 437
++C K+
Sbjct: 487 SICKERKL 494
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 148/373 (39%), Gaps = 71/373 (19%)
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT-GCSPNVVT 285
D ++E + L+ V+ ++ S+N + ++ G ++++ KLL H G PN
Sbjct: 141 DKVMEMFNLI--QVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCI 198
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHT-PDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
+ L+K + ++ + A + M+ +G + P+ + ++ L+DC R ++A+ +F
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFE-- 256
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSD 404
D++ + I PD V N +++ +AG
Sbjct: 257 -------------------------DMISKEG-----ISPDPVTFNVMINGFCRAGEVER 286
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIV 464
A + D M + G P+ Y+++ L++ C GKI EA + +
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFD------------------- 327
Query: 465 ELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKP 524
E+ K G LD V Y + R+G T +A +MK + +
Sbjct: 328 EVKKTG----------------LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 525 NAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLL 584
+ T N++L E ++ QML + + L+ ++ + N C + L
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 585 AEMREMGLLPAKA 597
+ M E G+ P A
Sbjct: 432 SVMSERGIWPHHA 444
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 42/332 (12%)
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G+LD+ NK Q G + N TY+ L+ + + + + M+ L+
Sbjct: 71 GVLDIFNKASQ---QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLF 127
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSK-QNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
L+ S++ H + +F + ++P +++ L+++ S +L + L +
Sbjct: 128 LNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAK 187
Query: 381 Y---IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA-PDKYSFAVLLSALCAAGK 436
+ + P+ N L+ + K G + A + M G + P+ +++ L+ L A +
Sbjct: 188 HNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSR 247
Query: 437 IYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
EAV+++ M S+E + D V + V
Sbjct: 248 SKEAVELFED--MISKEGISP--------------------------------DPVTFNV 273
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
I R+G A D MK+NG PN + + ++ F K +Q+ Q E+ +
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 557 IELSDRNFLNLCNFPCRSDAYYSTSNLLAEMR 588
++L + L N CR+ LL EM+
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 178/448 (39%), Gaps = 60/448 (13%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX 193
Y +MQ GFVP+T N +D + + A +F+
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE----------------------- 383
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
+M++ + T++ L++ F+ + L + G ++I
Sbjct: 384 ---------KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
+ + C+ G L+ A KL++ M G S ++VT ++L+ + + R L H+R
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGN 494
Query: 314 HTPDLVLWNVLIDCHSKAGRHQD--------ALGVFRSL-----------SKQNIQP--- 351
P+++ WN ++ K + +D + G F + S + + P
Sbjct: 495 LVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMED 554
Query: 352 DPYTLTSWLSMICQSR-----MFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
DP++ + ++ + R +F L + + D+ N LS + G S A
Sbjct: 555 DPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLAC 614
Query: 407 EFYDLMIELGFAP-DKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVE 465
+ +++ +G Y++ ++S+ G A V + D + VII
Sbjct: 615 KLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQG 674
Query: 466 LIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
L K G+ +A+ V + + LD V Y I AL ++ R +A +D MK NG+ P+
Sbjct: 675 LGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPD 734
Query: 526 AHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
+ N M+ K L++ + LK M+
Sbjct: 735 VVSYNTMIEVNSKAGKLKEAYKYLKAML 762
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
T++S++++F K A +L M + + ++I ++G D+A+ +L +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
G ++V Y TLI A ++ R+ +A+ LF+HM+S G PD+V +N +I+ +SKAG+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 335 QDALGVFRSLSKQNIQPDPYTLT 357
++A +++ P+ T T
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDT 774
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 149/372 (40%), Gaps = 24/372 (6%)
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
LR Y +A + + + L E LLG M G+ + IL+ + G
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA-SNLFNHMRSA----------- 312
+ A +L M G N Y +++ A ++ + + A S LF + ++
Sbjct: 144 ESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203
Query: 313 ---GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK-QNIQPDPYT-------LTSWLS 361
+ P V N L+ +A + VF L + + D ++ W
Sbjct: 204 IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGD 263
Query: 362 MICQSRMFDLLPEPALVF-RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
+ +F + E + V+ PD+ N+L+ L G DA +D + G PD
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
++ +L+ C + ++ +A+++Y + D ++ ++ +KA K A +F+
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
+ V Y + I L R+GR T + +K+ G +A T +++ +E
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 541 DLQKVNQMLKEM 552
L+ ++++EM
Sbjct: 444 KLEGAVKLVEEM 455
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 112 NSFLLLLRILWRAGMHAMF---FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
N L+ LR RA M + F F+ M+ + F +T++ N+ + G+L AL++
Sbjct: 216 NELLVGLR---RADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCWGDLDAALSL 270
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
F++++ + +++ S + P+ T++SL++
Sbjct: 271 FKEMKERS------SVYGSS--------------------FGPDICTYNSLIHVLCLFGK 304
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTT 288
+A + + V G + + + ILI C+ +D A ++ M + G P+ + Y
Sbjct: 305 AKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNC 364
Query: 289 LIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQN 348
L+ +++ +VT+A LF M G +N+LID + GR + +F L K+
Sbjct: 365 LLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Query: 349 IQPDPYTLTSWLSMICQSRMFD----LLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
D T + +C+ + L+ E + R DLV ++LL K G
Sbjct: 425 QFVDAITFSIVGLQLCREGKLEGAVKLVEE--METRGFSVDLVTISSLLIGFHKQGR 479
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 39/274 (14%)
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMR------SAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
+Y I + + A +LF M+ + PD+ +N LI G+ +DAL
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
V+ L +PD T + C+S D
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMD---------------------------- 341
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI 458
DA Y M GF PD + LL A K+ EA +++ V
Sbjct: 342 -----DAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWT 396
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
+ ++I L + G+ T+F + +D + +++ L R G+ A ++M+
Sbjct: 397 YNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEME 456
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
G + T + +L F+K+ +++K +
Sbjct: 457 TRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 201/498 (40%), Gaps = 31/498 (6%)
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ---- 171
LL+R R GM Y ++ S + N+ RN+ +D R G + A V +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 172 --IQPPNFFTFDITLFHL-SNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
+ PPN T DI L + R PN+ +++ K
Sbjct: 215 ESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA--NKLLQNMLHTGCSPNVVTY 286
A+ +L ++ + L+ C +D++ N L+ M P+VVT
Sbjct: 275 ANAAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTL 332
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSA----GHT--PDLVLWNVLIDCHSKAGRHQDALGV 340
LI +S RV +A +F MR G+ D + +N LID K GR ++A +
Sbjct: 333 GILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 341 F-RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVFCNALLSYLV 397
R ++ P+ T + C++ + E + I P++V N ++ +
Sbjct: 393 LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
+ + A F+ M + G + ++ L+ A C+ + +A+ Y + + DA+
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
I+ +I L + + A V ++ + LD +AY + I T M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAY 577
++ G KP++ T N ++ F K KD + V +M+++M ++ + + + DAY
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT------VTTYGAVIDAY 626
Query: 578 YSTSNL---LAEMREMGL 592
S L L ++MGL
Sbjct: 627 CSVGELDEALKLFKDMGL 644
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 7/345 (2%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PNA T++ L++ + + L A +++ M I+ +V ++ C+ L++A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+M G NVVTY TLI A + V A + M AG +PD ++ LI +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDL 386
R DA+ V L + D + + C +++++L + + PD
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD--MEKEGKKPDS 581
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
+ N L+S+ K + M E G P ++ ++ A C+ G++ EA+K+++
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 447 -GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
G+ S + I+ ++I K G + A ++ ++ ++ + Y L
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
+ D+M E +PN T +++ +L K+ + ++
Sbjct: 702 QGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/341 (18%), Positives = 135/341 (39%), Gaps = 8/341 (2%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP----NFF 178
RAG + +M+ PN N + R L++A+ F ++ N
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
T+ +TL H ++ML P+A +++L++ ++ +A +++
Sbjct: 478 TY-MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
+ G + + +LI C + ++L +M G P+ +TY TLI + +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS-KQNIQPDPYTLT 357
+ MR G P + + +ID + G +AL +F+ + + P+
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 358 SWLSMICQSRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIEL 415
++ + F L + + + + P++ NAL L + + D M+E
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Query: 416 GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
P++ + +L+ L + ++ + K +G ++S A
Sbjct: 717 SCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKA 757
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 199/512 (38%), Gaps = 59/512 (11%)
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ---- 171
LL+R R GM Y ++ S + N+ RN+ +D R G + A V +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 172 --IQPPNFFTFDITLFHL-SNXXXXXXXXXXXXKRMLRMHYYPN---------------- 212
+ PPN T DI L + R PN
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
ANT +L+ K LEA L+ LG ++ L+ K ++ I
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI--------- 325
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA----GHT--PDLVLWNVLID 326
P+VVT LI +S RV +A +F MR G+ D + +N LID
Sbjct: 326 -------RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 327 CHSKAGRHQDALGVF-RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--ID 383
K GR ++A + R ++ P+ T + C++ + E + I
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P++V N ++ + + + A F+ M + G + ++ L+ A C+ + +A+
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
Y + + DA+I+ +I L + + A V ++ + LD +AY + I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
M++ G KP++ T N ++ F K KD + V +M+++M ++ +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT--- 615
Query: 564 FLNLCNFPCRSDAYYSTSNL---LAEMREMGL 592
+ + DAY S L L ++MGL
Sbjct: 616 ---VTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 7/345 (2%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PNA T++ L++ + + L A +++ M I+ +V ++ C+ L++A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+M G NVVTY TLI A + V A + M AG +PD ++ LI +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDL 386
R DA+ V L + D + + C +++++L + + PD
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD--MEKEGKKPDS 581
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
+ N L+S+ K + M E G P ++ ++ A C+ G++ EA+K+++
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 447 -GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
G+ S + I+ ++I K G + A ++ ++ ++ + Y L
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
+ D+M E +PN T +++ +L K+ + ++
Sbjct: 702 QGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 158/393 (40%), Gaps = 14/393 (3%)
Query: 71 HQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMF 130
H + +D + V GRL + L + ++LE C+ N ++ L+ RAG
Sbjct: 372 HFNTLIDGLCKV-GRLKEAEELL--VRMKLEE-RCV--PNAVTYNCLIDGYCRAGKLETA 425
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP----NFFTFDITLFH 186
+ +M+ PN N + R L++A+ F ++ N T+ +TL H
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY-MTLIH 484
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
++ML P+A +++L++ ++ +A +++ + G
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ + +LI C + ++L +M G P+ +TY TLI + + +
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS-KQNIQPDPYTLTSWLSMICQ 365
MR G P + + +ID + G +AL +F+ + + P+ ++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 366 SRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
F L + + + + P++ NAL L + + D M+E P++ +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
+L+ L + ++ + K +G ++S A
Sbjct: 725 MEILMERLSGSDELVKLRKFMQGYSVASPTEKA 757
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 159/382 (41%), Gaps = 48/382 (12%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
T++++++ + K + EA + M+ GI + + +IH + G L L++ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 275 -LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGR 333
LH C+P+ TY LI + ++N + A F M+ G PD V + L+ S
Sbjct: 360 KLH--CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 334 HQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----------------------- 370
++A G+ + N++ D YT ++ M ++ M +
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN 477
Query: 371 --------LLPEPALVF---RYIDPDLVF-CNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
L E VF + ++ V N ++ + A E ++ M+ G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 419 PDKYSFAVLLSALCAA-----GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYL 473
PDK ++ L+ L +A G+ Y K+ G +S D + +I +K G+
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCY-LEKMRETGYVS----DCIPYCAVISSFVKLGQLN 592
Query: 474 MAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
MA V+K+ V D V Y V I A +G A ++ + MKE G+ N+ N ++
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 534 FTFYKEKDLQKVNQMLKEMIGS 555
+ K L + + ++++ S
Sbjct: 653 KLYTKVGYLDEAEAIYRKLLQS 674
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/485 (19%), Positives = 180/485 (37%), Gaps = 41/485 (8%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ---PPNFFT 179
++G + + +M G VP T N + + G L ++ + ++ P+ T
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRT 369
Query: 180 FDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
++I L L K M P+ ++ +LL AF + EA L+ M
Sbjct: 370 YNI-LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ------NMLHTGCSPN----------- 282
++ + L + + +L+ + + NM G S N
Sbjct: 429 DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLS 488
Query: 283 ----------------VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
V+ Y +IKAY S A LF M S G TPD +N L+
Sbjct: 489 EAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDP 384
+ A + + D + +S + ++ E +V I+P
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEP 608
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
D+V L++ G+ A + + M E G + + L+ G + EA +Y
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 445 RGGVMSSQETD-ARIHTV-IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
R + S +T ++T ++ L + A ++ ++ + +A+ +C
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYK 728
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR 562
++GR +A QM+E + + + N +L F + ++ + KEM+ S I+ D
Sbjct: 729 KNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDS 788
Query: 563 NFLNL 567
F +L
Sbjct: 789 TFKSL 793
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 150/373 (40%), Gaps = 32/373 (8%)
Query: 130 FFQAYH---QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF---QQIQPPNFFTFDIT 183
+F+ +H M S G+ N +DA+ G L A VF Q++ +++
Sbjct: 459 WFKRFHVAGNMSSEGYSAN-------IDAYGERGYLSEAERVFICCQEVNKRTVIEYNV- 510
Query: 184 LFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLG 243
+ + M+ P+ T+++L+ D + L M G
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 244 IQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDAS 303
+ +I +LG L++A ++ + M+ P+VV Y LI A+ ++ V A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 304 NLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL---SKQNIQPDPYT----- 355
+ M+ AG + V++N LI ++K G +A ++R L + PD YT
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 356 -LTSWLSMICQSR-MFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
L S SM+ ++ +FD + + R + F L Y K G +A + M
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQ-----RGEANEFTFAMMLCMY-KKNGRFEEATQIAKQMR 744
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYL 473
E+ D S+ +L G+ EAV+ ++ V S + D + L+K G +
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG--M 802
Query: 474 MAATVFKQAVVRK 486
V K +RK
Sbjct: 803 SKKAVRKIEEIRK 815
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 154/406 (37%), Gaps = 60/406 (14%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQ----------------- 245
M+R P +T+ +L++ + K + A LG M +G+Q
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 246 ------------------------FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP 281
S + +I + + G + A++ + ML G P
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
VT+ T+I Y + ++ + ++L M+ PD +N+LI H+K + A F
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYF 390
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCN-----ALLSYL 396
+ + ++PDP S+ +++ + ++ E + +D D V + AL
Sbjct: 391 KEMKDDGLKPDP---VSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMY 447
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
V+A + ++ G + ++ + A G + EA +V+ + QE +
Sbjct: 448 VEAEMLEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVF----ICCQEVNK 502
Query: 457 RI---HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
R + V+I + A +F+ + D Y + +L S P
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT-LVQILASADMPHKGRC 561
Query: 514 Y-DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
Y ++M+E G + ++ +F K L ++ KEM+ IE
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE 607
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 197/512 (38%), Gaps = 59/512 (11%)
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ---- 171
LL+R R GM Y ++ S + N+ RN+ +D R G + A V +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 172 --IQPPNFFTFDITLFHL-SNXXXXXXXXXXXXKRMLRMHYYPN---------------- 212
+ PPN T DI L + R PN
Sbjct: 215 ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
ANT +L+ K LEA L+ LG ++ N L+
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR----------------MNDLVL 318
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA----GHT--PDLVLWNVLID 326
M P+VVT LI +S RV +A +F MR G+ D + +N LID
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 327 CHSKAGRHQDALGVF-RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--ID 383
K GR ++A + R ++ P+ T + C++ + E + I
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P++V N ++ + + + A F+ M + G + ++ L+ A C+ + +A+
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
Y + + DA+I+ +I L + + A V ++ + LD +AY + I
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
M++ G KP++ T N ++ F K KD + V +M+++M ++ +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT--- 615
Query: 564 FLNLCNFPCRSDAYYSTSNL---LAEMREMGL 592
+ + DAY S L L ++MGL
Sbjct: 616 ---VTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 142/347 (40%), Gaps = 40/347 (11%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PNA T++ L++ + + L A +++ M I+ +V ++ C+ L++A
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+M G NVVTY TLI A + V A + M AG +PD ++ LI +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDL 386
R DA+ V L + D + + C +++++L + + PD
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK--KPDS 581
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
+ N L+S+ K + M E G P ++ ++ A C+ G++ EA+K+++
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK- 640
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
D +H+ K + V Y + I A + G
Sbjct: 641 --------DMGLHS-------------------------KVNPNTVIYNILINAFSKLGN 667
Query: 507 TPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
A + ++MK ++PN T N + ++ + + +++ EM+
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 139/351 (39%), Gaps = 14/351 (3%)
Query: 71 HQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMF 130
H + +D + V GRL + L + ++LE C+ N ++ L+ RAG
Sbjct: 372 HFNTLIDGLCKV-GRLKEAEELL--VRMKLEE-RCV--PNAVTYNCLIDGYCRAGKLETA 425
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPP----NFFTFDITLFH 186
+ +M+ PN N + R L++A+ F ++ N T+ +TL H
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY-MTLIH 484
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
++ML P+A +++L++ ++ +A +++ + G
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ + +LI C + ++L +M G P+ +TY TLI + + +
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS-KQNIQPDPYTLTSWLSMICQ 365
MR G P + + +ID + G +AL +F+ + + P+ ++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 366 SRMFD--LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIE 414
F L + + + + P++ NAL L + + D M+E
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 157/401 (39%), Gaps = 41/401 (10%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M +P+ T++SL +D + EA ++L M+ G + + +I + +L
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G+L A L + M TG PN V Y +LI + ES V +A F M G + ++
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
LI +SK G ++A V+ + PD S LS+ ++ E +F
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCAD---LGIVSEAESIFNA 715
Query: 382 IDPDL---VFCNALLSYLVKA-GHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ V A + YL K G +A E + M E G D SF +++ A G++
Sbjct: 716 LREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQL 775
Query: 438 YEAVKVY------------------------RGGVMSS---------QETDARIHTVIIV 464
E +++ +GGV S E I
Sbjct: 776 SECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITA 835
Query: 465 ELIKA-GKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
L A G Y A ++ + P ++ AY I SG A Y +M+E GL+
Sbjct: 836 TLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Query: 524 PNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNF 564
P+ T ++ + K ++ V ++ + +E S F
Sbjct: 896 PDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLF 936
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 140/347 (40%), Gaps = 47/347 (13%)
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
+ + LI + + G L+ A L ML +G + VT+ T+I +++A +L
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
M G +PD +N+L+ H+ AG + AL +R + K + PD T + L ++CQ +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 368 MFDLLPEPALVFRYIDPDLVFCN-----ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
M + E V +D + + + ++ V G A ++ +L
Sbjct: 425 M---VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE-RFQLDCVLSST 480
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGV-MSSQETDARIHTVIIVELIKAGKYLMAATVFK- 480
+ A ++ G EA V+ G MS Q D + V+I KA + A ++FK
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 481 -----------------------------QAVVRKYPLDN------VAYAVGICALLRSG 505
Q ++ + LD+ YA I + +R G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM-LDSGCKPGCKTYAAMIASYVRLG 599
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
DA Y+ M++ G+KPN ++ F + +++ Q + M
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 156/401 (38%), Gaps = 52/401 (12%)
Query: 214 NTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
+TF++L++ + K L +A L M+ G+ + +IH G L A LL+
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVL--IDCHSKA 331
M G SP+ TY L+ + ++ + A + +R G PD V + I C K
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSM------ICQSR------------------ 367
+A V + + +I+ D +++ + M + Q++
Sbjct: 426 VAEVEA--VIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLA 483
Query: 368 -MFDLLPEPALVFRYIDPDLVFC---------NALLSYLV------KAGHPSDAAEFYDL 411
+ D+ E L +++ + VF N +L Y V KA A +
Sbjct: 484 AVIDVYAEKGL---WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 412 MIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGK 471
M G PD+ ++ L L + EA ++ + S + + + +I ++ G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 472 YLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNM 531
A +++ + V Y I SG +A ++ M+E+G++ N H
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN-HIVLT 659
Query: 532 MLFTFYKE----KDLQKVNQMLKEMIGSRIELSDRNFLNLC 568
L Y + ++ ++V +K+ G + + L+LC
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLC 700
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 151/347 (43%), Gaps = 6/347 (1%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMD-ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
M +++ YP+ T L+ K + E +++ M G+++S +V+ L+ C G
Sbjct: 299 MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG 358
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+ + A + M G N + Y TL+ AY +SN + + LF MR G P +N
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-RMFDLLPEPALVFRY 381
+L+D +++ + + R + ++P+ + T +S ++ +M D+ + L +
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 382 I--DPDLVFCNALL-SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ P AL+ +Y V H A F ++ E G P ++ +L A +G
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE-GIKPSVETYTSVLDAFRRSGDTG 537
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+ +++++ + + + ++ K G Y+ A V + + Y + +
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
A R G+ +M LKP++ T + M++ F + +D ++
Sbjct: 598 NAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 150/371 (40%), Gaps = 10/371 (2%)
Query: 73 SVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQ 132
+VT ++ L + R K + I ++ G +++ F L++ G+
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQD--VFGGLVKSFCDEGLKEEALV 365
Query: 133 AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLS 188
+M+ G NT N MDA+ + ++ +F +++ P+ T++I L
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI-LMDAY 424
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE-AYQLLGLMVVLGIQFS 247
+ M + PN ++ L++A+ + + + A M +G++ S
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS 484
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
+ +T LIH + G + A + M G P+V TYT+++ A+ S ++
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
M + +N L+D +K G + +A V SK +QP T ++ +
Sbjct: 545 LMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGG 604
Query: 368 MFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
LP+ + + PD + + ++ V+ A ++ +M++ G PD S+
Sbjct: 605 QDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE 664
Query: 426 VLLSALCAAGK 436
L + L K
Sbjct: 665 KLRAILEDKAK 675
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 138/346 (39%), Gaps = 12/346 (3%)
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
LL N+ +V Y I S R DA ++ M PD V +LI
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 330 KAGRH-QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF------RYI 382
KAGR ++ +F +S++ ++ + C + L E ALV + I
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCD----EGLKEEALVIQTEMEKKGI 375
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
+ + N L+ K+ H + + M + G P ++ +L+ A +
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET 435
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYL-MAATVFKQAVVRKYPLDNVAYAVGICAL 501
+ R E + + +T +I + K MAA F + + +Y I A
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
SG A +++M + G+KP+ T +L F + D K+ ++ K M+ +I+ +
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR 555
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYA 607
+ L + + Y ++++E +MGL P+ + + + YA
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 167/401 (41%), Gaps = 14/401 (3%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K+M+ P T + LLN K + +A L+ M +G + + LI C +
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRV-TDASNLFNHM--RSAGHTP-D 317
+D A L M G PN VT ++ A + + + L + S + P D
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLD 264
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLLP 373
+V+ +L+D K G AL V++ +S++N+ D + +C S + +
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 374 EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
+ +V R ++PD+ N L+S L K G +A + + M G APD+ S+ V++ LC
Sbjct: 325 D--MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI 382
Query: 434 AGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
G + A + + SS + + V+I + G A +V ++ Y +
Sbjct: 383 HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLN--LMLSYGVKPNV 440
Query: 494 YAVG--ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKE 551
Y I ++ GR DA ++M+ + P+ T N++L L+ Q+ E
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Query: 552 MIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
M+ + + L C +LL+ ++ G+
Sbjct: 501 MLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 154/422 (36%), Gaps = 75/422 (17%)
Query: 117 LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP-- 174
LL L +AG +M+ G PN + N + + N+ AL +F +
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221
Query: 175 --PNFFTFDITLFHLSNXXXXXXXXXXXXKRML---RMHYYPNANTFHSLLNAFFKMDAL 229
PN T +I + L + +L + + + L+++ FK +
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNV 281
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
++A ++ M + V+ ++I C G + A + +M+ G +P+V TY TL
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPD-------------------------------- 317
I A + + +A +L M++ G PD
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL 401
Query: 318 ---LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE 374
++LWNV+ID + + G AL V + ++P+ YT
Sbjct: 402 LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTN------------------ 443
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
NAL+ VK G DA + M PD ++ +LL A C
Sbjct: 444 ---------------NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTL 488
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
G + A ++Y + + D +T ++ L G+ A ++ + +D+V +
Sbjct: 489 GHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Query: 495 AV 496
+
Sbjct: 549 LI 550
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
ML PN T ++L++ + K L++A+ + M I + +L+ C LG
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L +A +L ML GC P+++TYT L++ R+ A +L + +++ G T D V + +
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLI 550
Query: 324 LIDCHSKAGRHQDALGVFR 342
L +++ R +A V++
Sbjct: 551 LAKKYTRLQRPGEAYLVYK 569
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 5/357 (1%)
Query: 206 RMHYY-PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
+ H+Y P T+ L +A L +M+ G++ +++V+T LI + + +L
Sbjct: 136 KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELL 195
Query: 265 DVANKLLQNMLH-TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
D A L+ M + C P+V T+T LI + R ++ M G V +N
Sbjct: 196 DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNT 255
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQ-PDPYTLTSWLSMICQSRMFDLLPEPALVFRY- 381
+ID + KAG ++ V + + PD TL S + R + F+
Sbjct: 256 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM 315
Query: 382 -IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
+ PD+ N L+ KAG D M + F+ ++ +++ AG+I +
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
V+R + ++ + ++ KAG + +V +Q V LD + I A
Sbjct: 376 DDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINA 435
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
++G Y QM+E KP+ T M+ T+ V ++ K+MI S I
Sbjct: 436 YGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 132/314 (42%), Gaps = 11/314 (3%)
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P TYT L K + AS LF M S G P + ++ LI + K+ A
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 341 FRSL-SKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVFCNALLSYLV 397
+ S + +PD +T T +S C+ FDL+ L Y + V N ++
Sbjct: 202 LEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYG 261
Query: 398 KAGHPSDAAEFYDLMIELGFA-PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
KAG + MIE G + PD + ++ + + + Y + + D
Sbjct: 262 KAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDI 321
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
++I+ KAG Y +V R + L V Y + I ++GR + +
Sbjct: 322 TTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRK 381
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDA 576
MK G+KPN+ T ++ + K + K++ +L++++ S + L D F N C +A
Sbjct: 382 MKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL-DTPFFN-----CIINA 435
Query: 577 YYSTSNLLAEMREM 590
Y + LA M+E+
Sbjct: 436 YGQAGD-LATMKEL 448
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/267 (17%), Positives = 104/267 (38%), Gaps = 6/267 (2%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F +L+ + G + +M G +T N +D + + G +V +
Sbjct: 217 TFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADM 276
Query: 173 -----QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
P+ T + + N + L M P+ TF+ L+ +F K
Sbjct: 277 IEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQL-MGVQPDITTFNILILSFGKAG 335
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
+ ++ M + + I+I + G ++ + + + M + G PN +TY
Sbjct: 336 MYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYC 395
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
+L+ AY ++ V ++ + ++ D +N +I+ + +AG ++ + ++
Sbjct: 396 SLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEER 455
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPE 374
+PD T + + +FD + E
Sbjct: 456 KCKPDKITFATMIKTYTAHGIFDAVQE 482
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 163/419 (38%), Gaps = 66/419 (15%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
+TK+ S+ ++LR L R + + M G P+ + MD+ R+ + A+
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 167 TVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM 226
+F++ + +F + + +F++LL +
Sbjct: 207 ELFEESE-----SFGVKC---------------------------STESFNALLRCLCER 234
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
+ A + I F + I+I +LG ++ K+L+ M+ +G P+ ++Y
Sbjct: 235 SHVSAAKSVFNAKKG-NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY 293
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
+ LI+ + R+ D+ +F++++ G+ PD ++N +I C+ + R D
Sbjct: 294 SHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMI-CNFISARDFDE--------- 343
Query: 347 QNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
SM RM D +P+L + L+S L+K SDA
Sbjct: 344 --------------SMRYYRRMLD---------EECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVEL 466
E ++ M+ G P L LC+ G + A+ +Y+ + + +++ L
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 467 IKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPN 525
+ GK M V+ + YP D Y + L G +A ++ G PN
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 9/234 (3%)
Query: 368 MFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVL 427
M D+L +V ++PDL + V+ + A E ++ G SF L
Sbjct: 170 MMDVLK--GMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNAL 227
Query: 428 LSALCAAGKIYEAVKVY---RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
L LC + A V+ +G + D+ + ++I K G+ V K+ V
Sbjct: 228 LRCLCERSHVSAAKSVFNAKKGNI----PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVE 283
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ D ++Y+ I L R+GR D+ +D +K G P+A+ N M+ F +D +
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 545 VNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKAL 598
+ + M+ E + + L + + + EM G+LP L
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/251 (18%), Positives = 105/251 (41%), Gaps = 7/251 (2%)
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
G + +V +Y+ +++A + ++ M G PDL + +D + + A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVF--C--NALL 393
+ +F ++ + + L +C+ + VF ++ F C N ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSH---VSAAKSVFNAKKGNIPFDSCSYNIMI 262
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE 453
S K G + + M+E GF PD S++ L+ L G+I ++V+++
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 454 TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
DA ++ +I I A + + +++ + + + Y+ + L++ + DA
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 514 YDQMKENGLKP 524
+++M G+ P
Sbjct: 383 FEEMLSRGVLP 393
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 160/379 (42%), Gaps = 48/379 (12%)
Query: 162 LHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLN 221
L A +F QIQ PN F F++ L + +ML+ +P+ TF L+
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNL-LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 222 AFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP 281
A +M+ +L Q +V G Q V V L+H + G + A ++ M
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR---- 181
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
+VV++T+++ Y + V +A +F+ M +L W+++I+ ++K + A+ +F
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 342 RSLSKQNIQPDPYTLTSWLS--------------------------MICQSRMFDLLPEP 375
+ ++ + + + S +S +I + + D+
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 376 ALVFRYI-------DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
+ + I + D + ++++ L GH A ++ MI LGF P +F +L
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARI-HTVIIVELI-KAGKYLMAAT-VFKQAVVR 485
SA G + + +++Y + + R+ H IV+++ +AGK A + K V
Sbjct: 358 SACSHGGLVEKGLEIYE-NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKP 416
Query: 486 KYPLDNVAYAVGICALLRS 504
P+ + +G C + ++
Sbjct: 417 NAPI--LGALLGACKIYKN 433
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 159/402 (39%), Gaps = 48/402 (11%)
Query: 48 ENVRSSDLIALSCFFWSSQRRR-DHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCI 106
E R + A F W+++R+ H S T + M+ +L + TR+ +T+ ++L ++ + G +
Sbjct: 168 ERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK-TRQFETMVSVLEEMGTKGLL 226
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
+ +F + ++ A + M+ Y F N +D+ R A
Sbjct: 227 TME---TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 167 TVFQQIQP---PNFFTFDITL---FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
+F +++ PN T+ + L + N L+ + LL
Sbjct: 284 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 343
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
+ K DA+ +L +M G +V +TI+I C+ ++ A + +M+ +G
Sbjct: 344 RSMKKSDAI----KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P+ YT LI + ++ L M+ GH PD +N LI + + +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 341 FRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAG 400
+ + + I+P +T F+++ + SY V
Sbjct: 460 YNKMIQNEIEPSIHT-------------FNMI-------------------MKSYFVARN 487
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
+ A +D MI+ G PD S+ VL+ L + GK EA +
Sbjct: 488 YEMGRA-VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 528
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 10/341 (2%)
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
T+T +KA+ + A +F M+ + N L+D +A ++A +F L
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAG 400
K+ P+ T T L+ C+ R +L+ + ID PD+V N +L L+++
Sbjct: 290 -KERFTPNMMTYTVLLNGWCRVR--NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 346
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT 460
SDA + + +M G P+ S+ +++ C + A++ + V S + DA ++T
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 461 VIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT-FYDQMKE 519
+I K + K+ + +P D Y I L+ + + P+ T Y++M +
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI-KLMANQKMPEHGTRIYNKMIQ 465
Query: 520 NGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYS 579
N ++P+ HT NM++ +++ ++ + + EMI I D ++ L
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Query: 580 TSNLLAEMREMGL-LPAKALHALSSDKYAESLEEKYEHCAE 619
L EM + G+ P + ++D + E +E A+
Sbjct: 526 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 566
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 159/402 (39%), Gaps = 48/402 (11%)
Query: 48 ENVRSSDLIALSCFFWSSQRRR-DHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCI 106
E R + A F W+++R+ H S T + M+ +L + TR+ +T+ ++L ++ + G +
Sbjct: 169 ERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK-TRQFETMVSVLEEMGTKGLL 227
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
+ +F + ++ A + M+ Y F N +D+ R A
Sbjct: 228 TME---TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 167 TVFQQIQP---PNFFTFDITL---FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
+F +++ PN T+ + L + N L+ + LL
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 344
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
+ K DA+ +L +M G +V +TI+I C+ ++ A + +M+ +G
Sbjct: 345 RSMKKSDAI----KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P+ YT LI + ++ L M+ GH PD +N LI + + +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 341 FRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAG 400
+ + + I+P +T F+++ + SY V
Sbjct: 461 YNKMIQNEIEPSIHT-------------FNMI-------------------MKSYFVARN 488
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
+ A +D MI+ G PD S+ VL+ L + GK EA +
Sbjct: 489 YEMGRA-VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 529
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 10/341 (2%)
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
T+T +KA+ + A +F M+ + N L+D +A ++A +F L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAG 400
K+ P+ T T L+ C+ R +L+ + ID PD+V N +L L+++
Sbjct: 291 -KERFTPNMMTYTVLLNGWCRVR--NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT 460
SDA + + +M G P+ S+ +++ C + A++ + V S + DA ++T
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 461 VIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT-FYDQMKE 519
+I K + K+ + +P D Y I L+ + + P+ T Y++M +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI-KLMANQKMPEHGTRIYNKMIQ 466
Query: 520 NGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYS 579
N ++P+ HT NM++ +++ ++ + + EMI I D ++ L
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Query: 580 TSNLLAEMREMGL-LPAKALHALSSDKYAESLEEKYEHCAE 619
L EM + G+ P + ++D + E +E A+
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 133/332 (40%), Gaps = 34/332 (10%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL-GLMVVLGIQFSVNVWTILIHKHCQ 260
K+M + + T ++ + K + +A +L G+ LG Q +V+V+ L+H C
Sbjct: 135 KQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCD 194
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
+ + A L++ M+ G P+ TY L+ + + ++ +A + M G P
Sbjct: 195 VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARG 254
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
++LI+ AG + A + ++K PD T
Sbjct: 255 RDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTF------------------------ 290
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
N L+ + K+G E Y +LG D ++ L+ A+ GKI EA
Sbjct: 291 ---------NILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
++ V + ++ II + + G + A + F V+ +P + Y + I
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
R G+ DA + +M E GL P + +M+
Sbjct: 402 CGRGGKFVDAANYLVEMTEMGLVPISRCFDMV 433
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 142/397 (35%), Gaps = 69/397 (17%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
Y P + + L + +++L M L + S +I ++ + G +D A
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 269 KLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
+L + T GC V Y +L+ A + A L M G PD + +L++
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLV 387
AG+ ++A +S++ P +R DLL E
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNP-------------PARGRDLLIEG------------ 261
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
L+ AG+ A E M + GF PD +F +L+ A+ +G++ +++Y
Sbjct: 262 --------LLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTA 313
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
D + +I + K GK A + V + YA I + R+G
Sbjct: 314 CKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMF 373
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
DA +F+ MK PN + V ML M G
Sbjct: 374 DDAFSFFSDMKVKAHPPN-----------------RPVYTMLITMCG------------- 403
Query: 568 CNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSD 604
R + +N L EM EMGL+P + +D
Sbjct: 404 -----RGGKFVDAANYLVEMTEMGLVPISRCFDMVTD 435
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 10/241 (4%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+RM+R P+ T+ L+N + + EA + L M G +LI
Sbjct: 206 RRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNA 265
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G L+ A +++ M G P++ T+ LI+A +S V ++ G D+ +
Sbjct: 266 GYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF-- 379
LI SK G+ +A + + + +P P + +C++ MFD A F
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFD----DAFSFFS 381
Query: 380 ----RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+ P+ L++ + G DAA + M E+G P F ++ L G
Sbjct: 382 DMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGG 441
Query: 436 K 436
K
Sbjct: 442 K 442
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 151/341 (44%), Gaps = 10/341 (2%)
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
T+T +KA+ + A +F M+ + N L+D +A ++A +F L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 345 SKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID----PDLVFCNALLSYLVKAG 400
K+ P+ T T L+ C+ R +L+ + ID PD+V N +L L+++
Sbjct: 291 -KERFTPNMMTYTVLLNGWCRVR--NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT 460
SDA + + +M G P+ S+ +++ C + A++ + V S + DA ++T
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 461 VIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD-ACTFYDQMKE 519
+I K + K+ + +P D Y + L+ + + P+ A Y++M +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN-ALIKLMANQKMPEHATRIYNKMIQ 466
Query: 520 NGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYS 579
N ++P+ HT NM++ +++ ++ + + +EMI I D ++ L
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Query: 580 TSNLLAEMREMGL-LPAKALHALSSDKYAESLEEKYEHCAE 619
L EM + G+ P + ++D + E +E A+
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 157/399 (39%), Gaps = 42/399 (10%)
Query: 48 ENVRSSDLIALSCFFWSSQRRR-DHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCI 106
E R + A F W+++R+ H S T + M+ +L + TR+ +T+ ++L ++ + G +
Sbjct: 169 ERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK-TRQFETMVSVLEEMGTKGLL 227
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
+ +F + ++ A + M+ Y F N +D+ R A
Sbjct: 228 TME---TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 167 TVFQQIQP---PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+F +++ PN T+ + L M+ P+ + +L
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWND-MIDQGLKPDIVAHNVMLEGL 343
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
+ +A +L +M G +V +TI+I C+ ++ A + +M+ +G P+
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
YT LI + ++ L M+ GH PD +N LI + + A ++
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPS 403
+ + I+P +T F+++ + SY + +
Sbjct: 464 MIQNEIEPSIHT-------------FNMI-------------------MKSYFMARNYEM 491
Query: 404 DAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
A ++ MI+ G PD S+ VL+ L GK EA +
Sbjct: 492 GRA-VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACR 529
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 151/353 (42%), Gaps = 8/353 (2%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M R + P+ + +L+ ++D L +A +L +MV+ G + ++I C+ G
Sbjct: 130 MARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGH 189
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+ A LL++M +G P+V+TY T+I+ + A + G P ++ + V
Sbjct: 190 IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV 249
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI- 382
L++ + A+ V ++ + PD T S ++ C+ L E A V ++I
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN---LEEVASVIQHIL 306
Query: 383 ----DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ + V N LL L + + E ++M + + P ++ +L++ LC A +
Sbjct: 307 SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
A+ + + D + ++ + K G A + P + Y I
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVI 426
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKE 551
L + G A Y QM + G+ P+ T +++ F + +++ Q+LKE
Sbjct: 427 DGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 139/380 (36%), Gaps = 38/380 (10%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQ-QIQ---PPNFFTFDITLFHLSNX 190
M G P+ N + F GN A+ ++ Q+Q PP T+ + L L
Sbjct: 198 EDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV-LVELVCR 256
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
+ M YP+ T++SL+N + L E ++ ++ G++ +
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+ L+H C D ++L M T P V+TY LI ++ ++ A + F M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
PD+V +N ++ SK G DA+ + L K P
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELL-GLLKNTCCP------------------- 416
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
P L+ N+++ L K G A E Y M++ G PD + L+
Sbjct: 417 -------------PGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
C A + EA +V + + ++I L K + MA V + + D
Sbjct: 464 FCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 491 NVAYAVGICALLRSGRTPDA 510
Y + + G +A
Sbjct: 524 ETIYTAIVKGVEEMGMGSEA 543
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 40/334 (11%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
++ +L+ ++ R A + M G P+ N ++ + R GNL +V Q I
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+ + L N T+++LL++ + E
Sbjct: 306 -----LSHGLEL---------------------------NTVTYNTLLHSLCSHEYWDEV 333
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
++L +M +V + ILI+ C+ +L A ML C P++VTY T++ A
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ V DA L +++ P L+ +N +ID +K G + AL ++ + I PD
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 353 PYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNA-----LLSYLVKAGHPSDAAE 407
T S + C++ +L+ E V + ++ L K A E
Sbjct: 454 DITRRSLIYGFCRA---NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIE 510
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
++M+ G PD+ + ++ + G EAV
Sbjct: 511 VVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 148/377 (39%), Gaps = 41/377 (10%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
++H C G L A KL++ M P+ + + L++ +++ A + M +G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD--------------------- 352
PD + +N++I K G + AL + +S PD
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 353 ------------PY--TLTSWLSMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLS 394
P+ T T + ++C+ +R ++L + A+ Y PD+V N+L++
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY--PDIVTYNSLVN 287
Query: 395 YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
Y + G+ + A ++ G + ++ LL +LC+ E ++ +S
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
+ ++I L KA A F Q + +K D V Y + A+ + G DA
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 515 DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRS 574
+K P T N ++ K+ ++K ++ +M+ + I D +L CR+
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 575 DAYYSTSNLLAEMREMG 591
+ +L E G
Sbjct: 468 NLVEEAGQVLKETSNRG 484
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 155/354 (43%), Gaps = 17/354 (4%)
Query: 89 RHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFA 148
++K +++ +QL + T++ ++ LL++ AG+ +MQ++ P T
Sbjct: 170 QYKEAESLYVQLLESRYVPTED--TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIG 227
Query: 149 RNLFMDAHF-----RIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXX 199
++ +A+ R GN A+ VFQ+++ P T+++ + +L
Sbjct: 228 VTVY-NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL-MINLYGKASKSYMSWK 285
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
M PN T+ +L+NAF + +A ++ + G++ V V+ L+ +
Sbjct: 286 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 345
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G A ++ M H GC P+ +Y ++ AY + +DA +F M+ G P +
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
+L+ +SKA + + +S+ ++PD + L S L++ + F + E L
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM-EKILAE 464
Query: 380 RYIDP---DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
P D+ N L++ KAG E + + E F PD ++ + A
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 12/311 (3%)
Query: 57 ALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPN--SF 114
A+ F + R + T + M+ + G+ ++ + + + + ++ S C PN ++
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWK-LYCEMRSHQC----KPNICTY 302
Query: 115 LLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ- 173
L+ R G+ + + Q+Q G P+ + N M+++ R G + A +F +Q
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 174 ---PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALL 230
P+ +++I + + M R+ P + LL+A+ K +
Sbjct: 363 MGCEPDRASYNI-MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 231 EAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLI 290
+ ++ M G++ V +++ + +LG K+L M + C+ ++ TY LI
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 291 KAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ 350
Y ++ + LF ++ PD+V W I +S+ + L VF +
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Query: 351 PDPYTLTSWLS 361
PD T LS
Sbjct: 542 PDGGTAKVLLS 552
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 150/365 (41%), Gaps = 18/365 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMV----VLGIQFSVNVWTILIHKH 258
++L Y P +T+ L+ A+ M L+E +++ + + V V V+ I
Sbjct: 180 QLLESRYVPTEDTYALLIKAYC-MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGL 238
Query: 259 CQL-GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
+ G + A + Q M C P TY +I Y ++++ + L+ MRS P+
Sbjct: 239 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 298
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFD 370
+ + L++ ++ G + A +F L + ++PD Y + + ++ +F
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L+ +PD N ++ +AG SDA ++ M LG AP S +LLSA
Sbjct: 359 LMQHMG-----CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
A + + + + + E D + ++ + G++ + + D
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
Y + I ++G + ++KE +P+ T + + ++K K ++ +
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 533
Query: 551 EMIGS 555
EMI S
Sbjct: 534 EMIDS 538
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 148/388 (38%), Gaps = 74/388 (19%)
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
+ + P+ F+ L++A+ + EA L ++ + + + +LI +C G+++
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMES-----NRVTDASNLFNHMRSAGHTPDLVL 320
A +L M + SP + T+ AY+E +A ++F M+ P
Sbjct: 208 RAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
+N++I+ + KA + + SW + C+ R
Sbjct: 267 YNLMINLYGKASK---------------------SYMSW-KLYCEMRSHQ---------- 294
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
P++ AL++ + G A E ++ + E G PD Y + L+ + AG Y A
Sbjct: 295 -CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 353
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
+++ +M + D +Y + + A
Sbjct: 354 AEIF--SLMQHMGCEP---------------------------------DRASYNIMVDA 378
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
R+G DA +++MK G+ P + ++L + K +D+ K ++KEM + +E
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMR 588
++ N R + +LAEM
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEME 466
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 155/386 (40%), Gaps = 8/386 (2%)
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
Q V + +LI + Q A L +L + P TY LIKAY + + A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 305 LFNHMRSAGHTPDLV---LWNVLID-CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
+ M++ +P + ++N I+ + G ++A+ VF+ + + +P T +
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 361 SMICQSRMFDLLPEPALVFR--YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
++ ++ + + R P++ AL++ + G A E ++ + E G
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
PD Y + L+ + AG Y A +++ E D + +++ +AG + A V
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
F++ ++ + + A ++ +M ENG++P+ N ML + +
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 451
Query: 539 EKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKAL 598
K+ ++L EM + L N ++ L E++E P +
Sbjct: 452 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP--DV 509
Query: 599 HALSSDKYAESLEEKYEHCAEVNTEL 624
+S A S ++ Y C EV E+
Sbjct: 510 VTWTSRIGAYSRKKLYVKCLEVFEEM 535
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 92/228 (40%), Gaps = 5/228 (2%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFF 178
RAG + + MQ G P+ + N+ +DA+ R G A VF++++ P
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
+ + L + K M P+ +S+LN + ++ + ++L
Sbjct: 406 SH-MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
M ++ + ILI+ + + G L+ +L + P+VVT+T+ I AY
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
+F M +G PD VL+ S + + V R++ K
Sbjct: 525 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 15/291 (5%)
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
L+ M P+ T+ + + Y + + A LF +M G DL +N ++D
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYT----LTSWLSMICQSRMFDLLPEPALVFRYIDPD 385
K+ R + A +FR+L + D T L W + + ++L E +V R I+P+
Sbjct: 173 KSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKE--MVERGINPN 229
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY- 444
L N +L +AG A EF+ M + D ++ ++ AG+I A V+
Sbjct: 230 LTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 289
Query: 445 ---RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
R GV+ S T + +I L K A +F++ V R Y + Y V I L
Sbjct: 290 EMIREGVLPSVAT----YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+G +M+ G +PN T NMM+ + + +++K + ++M
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 5/210 (2%)
Query: 131 FQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDI----TLFH 186
+ +M G PN N + FR G + A F +++ + D+ T+ H
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-EIDVVTYTTVVH 273
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQF 246
M+R P+ T+++++ K D + A + MV G +
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+V + +LI G +L+Q M + GC PN TY +I+ Y E + V A LF
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 393
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
M S P+L +N+LI R +D
Sbjct: 394 EKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 122/296 (41%), Gaps = 9/296 (3%)
Query: 61 FFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRI 120
F + R H + + D + + RL H T+ +++ ++ S+ + +P +F ++
Sbjct: 79 FLDNHHREYVHDASSFDLAIDIAARL-HLHPTVWSLIHRMRSLR--IGPSPKTFAIVAER 135
Query: 121 LWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTF 180
AG + + M +G + + N +D + + A +F+ ++ F+
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRFSV 193
Query: 181 DITLFHLS----NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL 236
D +++ K M+ PN T++++L FF+ + A++
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 237 GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMES 296
M + V +T ++H G + A + M+ G P+V TY +I+ +
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 297 NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
+ V +A +F M G+ P++ +NVLI AG + + + + +P+
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 136/330 (41%), Gaps = 12/330 (3%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQS--YGFVPNTFARNLFMDAHFRIGNLHLALT 167
+ +SF L + I R +H + H+M+S G P TFA + + + G A+
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFA--IVAERYASAGKPDKAVK 147
Query: 168 VFQQIQPPNFF----TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
+F + F +F+ L L R LR + + T++ +LN +
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF--RALRGRFSVDTVTYNVILNGW 205
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
+ +A ++L MV GI ++ + ++ + G + A + M C +V
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
VTYTT++ + + + A N+F+ M G P + +N +I K ++A+ +F
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGH 401
+ ++ +P+ T + + + F E + +P+ N ++ Y +
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
A ++ M P+ ++ +L+S +
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 15/256 (5%)
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
L NH R H D +++ ID ++ H + + I P P T +++
Sbjct: 80 LDNHHREYVH--DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTF----AIVA 133
Query: 365 QSRMFDLLPEPALVFRYID-------PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ P+ A+ +++ DL N +L L K+ A E + + F
Sbjct: 134 ERYASAGKPDKAVKL-FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRF 191
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAAT 477
+ D ++ V+L+ C + +A++V + V + + ++ +AG+ A
Sbjct: 192 SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWE 251
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY 537
F + R +D V Y + +G A +D+M G+ P+ T N M+
Sbjct: 252 FFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC 311
Query: 538 KEKDLQKVNQMLKEMI 553
K+ +++ M +EM+
Sbjct: 312 KKDNVENAVVMFEEMV 327
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
+ A L M GI +V + +I C G A++LL++M+ +P++VT++ L
Sbjct: 27 INAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 86
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
I A+++ +V++A ++ M P + +N +ID K R DA + S++ +
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC 146
Query: 350 QPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
PD T ++ ++ C+++ D E + R I + V L+ + G A +
Sbjct: 147 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 206
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
+ MI G APD +F +L+ LC+ ++ +A +
Sbjct: 207 LLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+ M+ P+ TF +L+NAF K + EA ++ M+ I + + +I C+
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
+D A ++L +M GCSP+VVT++TLI Y ++ RV + +F M G + V +
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
LI + G A + + + PD T L+ +C +
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 244 IQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDAS 303
I+ V + T ++ + C+ G A L M G PNV+TY +I ++ S R +DA
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 304 NLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI 363
L HM PD+V ++ LI+ K + +A +++ + + +I P T S +
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 364 CQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDK 421
C+ D ++ + PD+V + L++ KA + E + M G +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 422 YSFAVLLSALCAAGKIYEA 440
++ L+ C G + A
Sbjct: 186 VTYTTLIHGFCQVGDLDAA 204
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 106/275 (38%), Gaps = 33/275 (12%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
+VV T ++ + +A NLF M G P+++ +N +ID +GR DA +
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGH 401
R + + + I+PD+V +AL++ VK
Sbjct: 69 RHM---------------------------------IEKQINPDIVTFSALINAFVKERK 95
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
S+A E Y M+ P ++ ++ C ++ +A ++ D +
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
+I KA + +F + R + V Y I + G A ++M G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 522 LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
+ P+ T + ML +K+L+K +L+++ S
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 34/316 (10%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G V ++ ++ + LD+ ++L+ M GC ++ T+T LI Y ++ ++
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
+F MR +G D +N++I AGR AL ++ + ++ I T L
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 363 ICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
I +S D++ A D M+ + +
Sbjct: 304 IAKSEKVDVVQSIA---------------------------------DDMVRICEISEHD 330
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
+F LL + C +GKI EA+++ R DA+ +++ L +A + + A +
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
RK NV Y + I LR A ++ +K++G P T ++ +K K
Sbjct: 391 KRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 543 QKVNQMLKEMIGSRIE 558
+K + EMI + IE
Sbjct: 450 EKGCNLFNEMIENGIE 465
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
T+ S+++ + L +A + M +G + V+V+T LI + L+ + Q M
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
C P+VVTYT +I YM +V +A N F +M G +PD ++ I+C +A +
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 335 QDALGVFRSLSKQNIQP 351
+DAL + + + I P
Sbjct: 976 EDALKLLSEMLDKGIAP 992
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 110/290 (37%), Gaps = 42/290 (14%)
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
G N Y IK +LF MR G W ++I + + G
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PDLVFCN 390
A+ F+ + + P T ++++C+ + ++ E FR + PD
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNV-EEATRTFREMIRSGFVPDRELVQ 789
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
L L + G+ DA D + ++GF P ++++ + ALC GK+ EA+ ++
Sbjct: 790 DYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEAL-----SELA 843
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
S E + + LD Y + LL+ G A
Sbjct: 844 SFEGERSL------------------------------LDQYTYGSIVHGLLQRGDLQKA 873
Query: 511 CTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
+ MKE G KP H ++ F+KEK L+KV + ++M G E S
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPS 923
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/382 (17%), Positives = 150/382 (39%), Gaps = 43/382 (11%)
Query: 61 FFWSSQRRR-DHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLR 119
F W +R H S + + V G + K ++++ ++ GC++T++ ++ +++
Sbjct: 665 FSWVGKRNGYKHNSEAYNMSIKVAG-CGKDFKQMRSLFYEMRRQGCLITQD--TWAIMIM 721
Query: 120 ILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFT 179
R G+ + + + +M+ G +P++ +TV + + N
Sbjct: 722 QYGRTGLTNIAIRTFKEMKDMGLIPSS-------------STFKCLITVLCEKKGRNVEE 768
Query: 180 FDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
T + M+R + P+ L ++ +A L +
Sbjct: 769 ATRTF-----------------REMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL 811
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRV 299
+G +V ++I I C++G L+ A L + + TY +++ ++ +
Sbjct: 812 GKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDL 870
Query: 300 TDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSW 359
A + N M+ G P + ++ LI K + + L + + ++ +P ++ ++
Sbjct: 871 QKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEP---SVVTY 927
Query: 360 LSMICQSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIE 414
+MIC + E FR ++ PD + ++ L +A DA + M++
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 415 LGFAPDKYSFAVLLSALCAAGK 436
G AP +F + L GK
Sbjct: 988 KGIAPSTINFRTVFYGLNREGK 1009
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/406 (16%), Positives = 151/406 (37%), Gaps = 38/406 (9%)
Query: 163 HLALTVFQQIQPPNFFTFDI----TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHS 218
HLA+ F ++ + F+ + T+ ++ M + + T+
Sbjct: 170 HLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTI 229
Query: 219 LLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTG 278
L++ + K + + + M G + + I+I C G D+A + + M+ G
Sbjct: 230 LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG 289
Query: 279 CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
+ + TY L+ +S +V ++ + M + + L+ +G+ ++AL
Sbjct: 290 ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
+ R L + M ++ F++ L+ L +
Sbjct: 350 ELIRELKNKE-------------MCLDAKYFEI--------------------LVKGLCR 376
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI 458
A DA E D+M D + +++S + +A++ + S +
Sbjct: 377 ANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVST 435
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
+T I+ L K ++ +F + + D+VA + L R +A + M+
Sbjct: 436 YTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSME 495
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNF 564
E G+KP + ++ + + ++ ++ +M S+I + D F
Sbjct: 496 EKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIF 541
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 155/354 (43%), Gaps = 17/354 (4%)
Query: 89 RHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFA 148
++K +++ +QL + T++ ++ LL++ AG+ +MQ++ P T
Sbjct: 192 QYKEAESLYVQLLESRYVPTED--TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIG 249
Query: 149 RNLFMDAHF-----RIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXX 199
++ +A+ R GN A+ VFQ+++ P T+++ + +L
Sbjct: 250 VTVY-NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL-MINLYGKASKSYMSWK 307
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
M PN T+ +L+NAF + +A ++ + G++ V V+ L+ +
Sbjct: 308 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+ G A ++ M H GC P+ +Y ++ AY + +DA +F M+ G P +
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
+L+ +SKA + + +S+ ++PD + L S L++ + F + E L
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM-EKILAE 486
Query: 380 RYIDP---DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
P D+ N L++ KAG E + + E F PD ++ + A
Sbjct: 487 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 540
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 150/365 (41%), Gaps = 18/365 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMV----VLGIQFSVNVWTILIHKH 258
++L Y P +T+ L+ A+ M L+E +++ + + V V V+ I
Sbjct: 202 QLLESRYVPTEDTYALLIKAYC-MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGL 260
Query: 259 CQL-GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
+ G + A + Q M C P TY +I Y ++++ + L+ MRS P+
Sbjct: 261 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 320
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFD 370
+ + L++ ++ G + A +F L + ++PD Y + + ++ +F
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L+ +PD N ++ +AG SDA ++ M LG AP S +LLSA
Sbjct: 381 LMQHMG-----CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
A + + + + + E D + ++ + G++ + + D
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLK 550
Y + I ++G + ++KE +P+ T + + ++K K ++ +
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFE 555
Query: 551 EMIGS 555
EMI S
Sbjct: 556 EMIDS 560
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 138/339 (40%), Gaps = 16/339 (4%)
Query: 29 KTVTAPVSYSYSYSSETKRENVRSSDLIALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTR 88
KT+ V +Y ++ N A+ F + R + T + M+ + G+ ++
Sbjct: 246 KTIGVTVYNAYIEGLMKRKGNTEE----AIDVFQRMKRDRCKPTTETYNLMINLYGKASK 301
Query: 89 RHKTLQAILLQLESIGCILTKNPN--SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNT 146
+ + + + ++ S C PN ++ L+ R G+ + + Q+Q G P+
Sbjct: 302 SYMSWK-LYCEMRSHQC----KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 356
Query: 147 FARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXK 202
+ N M+++ R G + A +F +Q P+ +++I + +
Sbjct: 357 YVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI-MVDAYGRAGLHSDAEAVFE 415
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
M R+ P + LL+A+ K + + ++ M G++ V +++ + +LG
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
K+L M + C+ ++ TY LI Y ++ + LF ++ PD+V W
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
I +S+ + L VF + PD T LS
Sbjct: 536 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 574
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 148/388 (38%), Gaps = 74/388 (19%)
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
+ + P+ F+ L++A+ + EA L ++ + + + +LI +C G+++
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMES-----NRVTDASNLFNHMRSAGHTPDLVL 320
A +L M + SP + T+ AY+E +A ++F M+ P
Sbjct: 230 RAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 321 WNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
+N++I+ + KA + + SW + C+ R
Sbjct: 289 YNLMINLYGKASK---------------------SYMSW-KLYCEMRSHQ---------- 316
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
P++ AL++ + G A E ++ + E G PD Y + L+ + AG Y A
Sbjct: 317 -CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 375
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
+++ +M + D +Y + + A
Sbjct: 376 AEIF--SLMQHMGCEP---------------------------------DRASYNIMVDA 400
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELS 560
R+G DA +++MK G+ P + ++L + K +D+ K ++KEM + +E
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMR 588
++ N R + +LAEM
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEME 488
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 155/386 (40%), Gaps = 8/386 (2%)
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
Q V + +LI + Q A L +L + P TY LIKAY + + A
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 305 LFNHMRSAGHTPDLV---LWNVLID-CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
+ M++ +P + ++N I+ + G ++A+ VF+ + + +P T +
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 361 SMICQSRMFDLLPEPALVFR--YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
++ ++ + + R P++ AL++ + G A E ++ + E G
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
PD Y + L+ + AG Y A +++ E D + +++ +AG + A V
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
F++ ++ + + A ++ +M ENG++P+ N ML + +
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 473
Query: 539 EKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKAL 598
K+ ++L EM + L N ++ L E++E P +
Sbjct: 474 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP--DV 531
Query: 599 HALSSDKYAESLEEKYEHCAEVNTEL 624
+S A S ++ Y C EV E+
Sbjct: 532 VTWTSRIGAYSRKKLYVKCLEVFEEM 557
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 92/228 (40%), Gaps = 5/228 (2%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFF 178
RAG + + MQ G P+ + N+ +DA+ R G A VF++++ P
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
+ + L + K M P+ +S+LN + ++ + ++L
Sbjct: 428 SH-MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 486
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
M ++ + ILI+ + + G L+ +L + P+VVT+T+ I AY
Sbjct: 487 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
+F M +G PD VL+ S + + V R++ K
Sbjct: 547 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 177/400 (44%), Gaps = 18/400 (4%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMV----VLGIQFSVNVWTILIHKHCQLGILDV 266
PNA+ +S L+ + + +A+ + M V G +S+ + + K C+ L +
Sbjct: 140 PNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCE-SALRM 198
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
+L + C +VV Y T I N V + ++ M+ GH + +++L+
Sbjct: 199 FRELEREPKRRSCF-DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVS 257
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDP 384
+ GR + AL V+ + I + + +S + +DL + +++ + + P
Sbjct: 258 IFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKP 317
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
+LV CN L++ L KAG + Y ++ LG PD+Y++ LL+AL A + + ++++
Sbjct: 318 NLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLF 377
Query: 445 RGGVMSSQET---DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
++ S+ + ++ +V K G + A + + + +Y + I A
Sbjct: 378 --DMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISAC 435
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
+S ++ A Y+ M + KPN T ++ + +V +LK+ + + L +
Sbjct: 436 EKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKK-VEPDVSLYN 494
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHAL 601
+C R + ++ L +MREMGL P A+
Sbjct: 495 AAIHGMC---LRREFKFA-KELYVKMREMGLEPDGKTRAM 530
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 174/472 (36%), Gaps = 81/472 (17%)
Query: 109 KNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
+N + LR L R + + M+ G PN A N F+ R G++ A TV
Sbjct: 105 RNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTV 164
Query: 169 FQ------------------------------------QIQPPNFFTFDITLFHLSNXXX 192
F+ + +P FD+ L++ +
Sbjct: 165 FEFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLC 224
Query: 193 XXXXXXXXXKRMLRM----HYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSV 248
+R+ R+ + T+ L++ F + A + MV I
Sbjct: 225 GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
+ +I + D+A K+ Q+ML G PN+V TLI + ++ +V +++
Sbjct: 285 DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
++S GH PD WN L+ KA R++D L +F + +N+ L +L
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL----CCLNEYL-------- 392
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
+ +V C L G+ A + M G S+ +++
Sbjct: 393 -------------YNTAMVSCQKL-------GYWEKAVKLLYEMEGSGLTVSTSSYNLVI 432
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA--VVRK 486
SA + K A+ VY + D + +T + L+++ + +++ + +++K
Sbjct: 433 SACEKSRKSKVALLVYE----HMAQRDCKPNTFTYLSLVRS---CIWGSLWDEVEDILKK 485
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
D Y I + A Y +M+E GL+P+ T MML K
Sbjct: 486 VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 151/369 (40%), Gaps = 20/369 (5%)
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+N +H N T + ++ ++V A LF+ MR G P+ N + C +
Sbjct: 96 RNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRN 155
Query: 332 GRHQDALGVFRSL-SKQNIQPDPYTLTSWLSMI-----CQS--RMF-DLLPEPALVFRYI 382
G Q A VF + K+N+ Y+L L + C+S RMF +L EP R
Sbjct: 156 GDIQKAFTVFEFMRKKENVTGHTYSLM--LKAVAEVKGCESALRMFRELEREPK---RRS 210
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
D+V N +S + + + + +M G + ++++L+S G+ A+
Sbjct: 211 CFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALD 270
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
VY V + +I K K+ +A +F+ + + + VA I +L
Sbjct: 271 VYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLG 330
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR 562
++G+ Y +K G KP+ +T N +L YK + V Q+ + + +
Sbjct: 331 KAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNE 390
Query: 563 NFLNLCNFPCRSDAYYSTS-NLLAEMREMGLLPAKALHALSSDKYAESLEEK-----YEH 616
N C+ Y+ + LL EM GL + + + L +S + K YEH
Sbjct: 391 YLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEH 450
Query: 617 CAEVNTELN 625
A+ + + N
Sbjct: 451 MAQRDCKPN 459
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 132/320 (41%), Gaps = 15/320 (4%)
Query: 255 IHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS--- 311
+ K +L + A +L +M G PN + + + + + A +F MR
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN 173
Query: 312 -AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
GHT L+L V ++ + AL +FR L ++ + + + + + I +
Sbjct: 174 VTGHTYSLMLKAV-----AEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRIN 228
Query: 371 LLPEPALVFRYIDPD-----LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
+ E ++R + D + + L+S V+ G A + YD M+ + + +
Sbjct: 229 NVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMY 288
Query: 426 VLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR 485
++SA K A+K+++ + + + +I L KAGK + V+
Sbjct: 289 AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSL 348
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMK-ENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ D + + AL ++ R D +D ++ EN N + N + + K +K
Sbjct: 349 GHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 545 VNQMLKEMIGSRIELSDRNF 564
++L EM GS + +S ++
Sbjct: 409 AVKLLYEMEGSGLTVSTSSY 428
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 43/396 (10%)
Query: 165 ALTVFQQI-QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAF 223
AL VF I PP F+ L LS +R+ + + +F +L A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFY-QRIRHVGGRLDQFSFLPILKAV 121
Query: 224 FKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
K+ AL E +L G+ + V T + + G ++ A + M H +V
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR----DV 177
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD-LVLWNVLIDCHSKAGRHQDALGVFR 342
VT+ T+I+ Y V +A LF M+ + PD ++L N++ C + G + ++
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC-GRTGNMRYNRAIYE 236
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDL----------------------------LPE 374
L + +++ D + LT+ ++M + D+ L +
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 375 PALVFRYIDP-DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
++F + DLV ++S V++ +P +A ++ M G PD S ++SA
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 434 AGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN-V 492
G + +A V+ ++ E++ I+ +I K G VF+ K P N V
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFE-----KMPRRNVV 411
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
+++ I AL G DA + + +MK+ ++PN T
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 149/365 (40%), Gaps = 40/365 (10%)
Query: 56 IALSCFFWSSQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
+A F WS ++ +V H++ + +K + ++ ++ G T +F
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTT--ARTFN 188
Query: 116 LLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQP- 174
LL+ AG+ + + +++ + P + N +++ + L V++Q+
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248
Query: 175 ---PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLE 231
P+ T++I L+ + M R + P++ T++ LL+ K + L
Sbjct: 249 GFSPDVLTYNILLW-TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA 307
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
A L M +GI SV +T LI + G L+ L M+ GC P+VV YT +I
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
Y+ S + A +F M G P++ +N +I AG ++A
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA-------------- 413
Query: 352 DPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDL 411
WL +SR +P+ V + L+SYL KAG S+A +
Sbjct: 414 ------CWLLKEMESRG-------------CNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 412 MIELG 416
M++ G
Sbjct: 455 MVKKG 459
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 137/318 (43%), Gaps = 16/318 (5%)
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
N++H L+ F + ++L+ MV G + + +LI C G +A + +
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVV 205
Query: 273 NMLHTGC---SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+ + P +Y ++ + + + ++ M G +PD++ +N+L+ +
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY------ID 383
+ G+ +F +++ PD YT L ++ + P AL ID
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK----PLAALTTLNHMKEVGID 321
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
P ++ L+ L +AG+ F D M++ G PD + V+++ +G++ +A ++
Sbjct: 322 PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
+R + Q + + +I L AG++ A + K+ R + V Y+ + L +
Sbjct: 382 FREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRK 441
Query: 504 SGRTPDACTFYDQMKENG 521
+G+ +A +M + G
Sbjct: 442 AGKLSEARKVIREMVKKG 459
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 40/226 (17%)
Query: 133 AYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLS 188
Y QM GF P+ N+ + ++R+G + +F ++ P+ +T++I L H+
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNI-LLHIL 299
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSV 248
M + P+ + +L++ + L L MV G + V
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 249 NVWTILIHKHCQLGILDVANK-----------------------------------LLQN 273
+T++I + G LD A + LL+
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
M GC+PN V Y+TL+ ++ ++++A + M GH LV
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 29/282 (10%)
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
SV ++ IL++ + L A KL + M P VVTY TLI+ Y RV A +
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
M+ A + +++N +ID +AGR +ALG+ P T S + C++
Sbjct: 309 EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 367 RMFDLLPEPALVF-----RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDK 421
LP + + R +DP N Y K + Y +IE G +PD+
Sbjct: 369 ---GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 422 YSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ 481
++ ++L LC GK+ A++V + + D T++I L + A F
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 482 AVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLK 523
AV R G P TF +M +NGL+
Sbjct: 486 AV-------------------RRGIIPQYITF--KMIDNGLR 506
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 143/337 (42%), Gaps = 14/337 (4%)
Query: 112 NSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFAR----NLFMDAHFRIGNLHLALT 167
++F++L+R RAGM +A+ +SY V + + +DA + G++ A
Sbjct: 174 DTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASM 233
Query: 168 VFQQIQP-------PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
++I P+ F+I L + + M M+ P T+ +L+
Sbjct: 234 YLERIGGTMDSNWVPSVRIFNI-LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLI 292
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
+ +M + A ++L M + ++ + V+ +I + G L A +++
Sbjct: 293 EGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG 352
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P +VTY +L+K + ++ + AS + M + G P +N SK + ++ + +
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 341 FRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVK 398
+ L + PD T L M+C+ L + + R IDPDL+ L+ L +
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+A E +D + G P +F ++ + L + G
Sbjct: 473 LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 175/411 (42%), Gaps = 31/411 (7%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
++M+ + P +++S++ F+ + + + L+ ++ L V+ + I++++ C+
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
D A ++ M G P V Y+++I + + RV +A F M +G PD + +
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM-------FDLLPE 374
++I+ +++ GR +A + + K ++P +T T +S + M D + E
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 375 PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL--C 432
L P++V AL+ + +K G + + LM E D ++ LLS L
Sbjct: 681 DGL-----SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKA----GKYLMAATVF---KQAVVR 485
A K V V G Q I T +V + + G A V K++++
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRL---IRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP 792
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
L N G CA +GR +A + M++ G+ PN T +++ + + D++
Sbjct: 793 NLYLHN-TIITGYCA---AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Query: 546 NQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAK 596
+ + G+ E + L C L+ EM++ G+ P K
Sbjct: 849 IDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNK 896
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 166/404 (41%), Gaps = 58/404 (14%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM+ + + F++L++ F K+ L + + M+ G+Q +V + I+I +C+ G
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 263 ILDVANKLLQNMLHTGC---SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+D A +L N +TG S NV YT LI + + + A +L M G PD +
Sbjct: 357 NVDYALRLFVN--NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHI 414
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDP-------------------------- 353
+ VL+ K + A+ + +S+ +P
Sbjct: 415 TYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDAN 474
Query: 354 ---YTLTSWLSMICQSR-----------MFDLLPEPALVFRYIDPDLVFCNALLSYLVKA 399
L + +C R M +L P L F Y N+++ L +
Sbjct: 475 LAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP-LPFSY--------NSVIKCLFQE 525
Query: 400 GHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIH 459
D A +++ EL F PD ++ ++++ LC A + I+
Sbjct: 526 NIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIY 585
Query: 460 TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKE 519
+ II L K G+ + A F + + D +AY + I R+GR +A +++ +
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
Query: 520 NGLKPNAHTCNMMLFTFYK----EKDLQKVNQMLKEMIGSRIEL 559
+ L+P++ T +++ F K EK Q +++ML++ + + L
Sbjct: 646 HFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 203/486 (41%), Gaps = 42/486 (8%)
Query: 82 VLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYG 141
+LG + R+ L A+ L + + L N L RI +M + G
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTA--LCSQRNYIAALSRI--------------EKMVNLG 507
Query: 142 FVPNTFARNLFMDAHFR---IGNLHLALTVFQQIQ-PPNFFTFDITLFHLSNXXXXXXXX 197
P F+ N + F+ I +L + + Q++ P+ T+ I + L
Sbjct: 508 CTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAF 567
Query: 198 XXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHK 257
M + P + S++ + K ++EA + M+ GIQ + I+I+
Sbjct: 568 AII-DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINT 626
Query: 258 HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
+ + G +D AN+L++ ++ P+ TYT LI +++ + + M G +P+
Sbjct: 627 YARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS----MICQSRMFDLLP 373
+VL+ LI K G + + +F + + +I+ D + LS + + + ++
Sbjct: 687 VVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 374 EPA---LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
EP L+ R I + ++ S L G S A E ++ P+ Y +++
Sbjct: 747 EPGKEKLLQRLIRTKPLV--SIPSSLGNYGSKSFAMEVIG-KVKKSIIPNLYLHNTIITG 803
Query: 431 LCAAGKIYEAVK----VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK 486
CAAG++ EA + + G++ + T +T+++ I+AG A +F+
Sbjct: 804 YCAAGRLDEAYNHLESMQKEGIVPNLVT----YTILMKSHIEAGDIESAIDLFEGTNCEP 859
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
D V Y+ + L R DA +M+++G+ PN + +L + +
Sbjct: 860 ---DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAV 916
Query: 547 QMLKEM 552
+++K+M
Sbjct: 917 KVVKDM 922
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN ++++ + L EAY L M GI ++ +TIL+ H + G ++ A L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ T C P+ V Y+TL+K + R DA L M+ +G P+ + L+ C
Sbjct: 852 FEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
+ +A+ V + ++ +I P T + ++C+ +
Sbjct: 909 SRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEK 945
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 164/427 (38%), Gaps = 40/427 (9%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
YY + + L+ + K + + A +L MV + ++ LIH +LG+LD
Sbjct: 268 YYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF-NHMRSAGHTPDLVLWNVLIDC 327
+ M+ G NV TY +I +Y + V A LF N+ S + ++ + LI
Sbjct: 328 VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFG 387
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI--CQSRMFDLLPEPALVFR--YID 383
K G A+ + + I PD T L M+ C + ++ +++ I+
Sbjct: 388 FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGIN 447
Query: 384 P----DL----VFCNALLSYLVKAGHPSDAAEF-------------------YDLMIELG 416
P DL V +LL + + A + M+ LG
Sbjct: 448 PPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG 507
Query: 417 FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE----TDARIHTVIIVELIKAGKY 472
P +S+ ++ L I + + V QE D + +++ EL K
Sbjct: 508 CTPLPFSYNSVIKCLFQENIIEDLASL----VNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
A + Y+ I +L + GR +A + +M E+G++P+ +M
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 533 LFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
+ T+ + + + N++++E++ + S + L + + L +M E GL
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 593 LPAKALH 599
P L+
Sbjct: 684 SPNVVLY 690
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 147/364 (40%), Gaps = 25/364 (6%)
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
VN++ L + C+ G A L +M G + V YT L+K Y + N +T A L+
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS- 366
M D ++N LI K G +F + K+ +Q + +T + C+
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 367 ------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
R+F + R + + N + + K G A + M++ G PD
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVH---CYTNLIFGFYKKGGM-DKAVDLLMRMLDNGIVPD 412
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
++ VLL L ++ A+ + + S + I+ +I +L G +
Sbjct: 413 HITYFVLLKMLPKCHELKYAMVILQ----SILDNGCGINPPVIDDL---GNIEVKVESLL 465
Query: 481 QAVVRKYP-LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKE 539
+ RK L V AV AL A + ++M G P + N ++ ++E
Sbjct: 466 GEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Query: 540 ---KDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAK 596
+DL + +++E+ + D +L + N C+ + + ++ M E+GL P
Sbjct: 526 NIIEDLASLVNIIQEL--DFVPDVD-TYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTV 582
Query: 597 ALHA 600
A+++
Sbjct: 583 AIYS 586
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 164/403 (40%), Gaps = 27/403 (6%)
Query: 35 VSYSYSYSSETKRENVRSSDLIALSCFFWSSQRRRDHQSVTV------DHMVPVLGRLTR 88
+S + TK R D + C ++++ D +V++ + +V +L L+
Sbjct: 66 ISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSF 125
Query: 89 RHKTLQAILLQLESIGCILTKN----PNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVP 144
+KT A L + C +N N + LL++I G + + +M G+
Sbjct: 126 DNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPT 185
Query: 145 NTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDI------TLFHLSNXXXXXXXXX 198
NL + G LA V +Q F + + H
Sbjct: 186 TACTFNLLICT---CGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLID 242
Query: 199 XXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKH 258
++ML + P+ T++ ++ A F++ Y+LL MV G + + IL+H H
Sbjct: 243 WVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH-H 301
Query: 259 CQLGILDVAN-KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
G +A LL +M G P V+ +TTLI + ++ + G TPD
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLP 373
+V + V+I + G + A +F+ ++++ P+ +T S + C + F LL
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 374 EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
E + R +P+ V + L++ L AG +A E M+E G
Sbjct: 422 E--MESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 14/315 (4%)
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ N + +L+ + G +L+ M+ G T+ LI E+ D F
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQF 210
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL--GVFRSLSKQNIQPDPYT----LTSWL 360
++ + P +N ++ HS G Q L V+ + + PD T + +
Sbjct: 211 IKSKTFNYRPYKHSYNAIL--HSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF 268
Query: 361 SMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
+ R++ LL E +V PDL N LL +L P A + M E+G P
Sbjct: 269 RLGKTDRLYRLLDE--MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET-DARIHTVIIVELIKAGKYLMAATVF 479
F L+ L AGK+ EA K + + T D +TV+I I G+ A +F
Sbjct: 327 VIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 480 KQAVVRKYPLDNV-AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
K+ + K L NV Y I +G+ +AC +M+ G PN + ++
Sbjct: 386 KE-MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Query: 539 EKDLQKVNQMLKEMI 553
+ + ++++K+M+
Sbjct: 445 AGKVLEAHEVVKDMV 459
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 129/316 (40%), Gaps = 12/316 (3%)
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
AN +H L+ F + +L+ M+ G + + +LI C G +A +++
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVE 208
Query: 273 NMLHTGC---SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+ + P +Y ++ + + + ++ M G TPD++ +N+++ +
Sbjct: 209 QFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF 268
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR----MFDLLPEPALVFRYIDPD 385
+ G+ + + K PD YT L + +LL V ++P
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG--VEPG 326
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
++ L+ L +AG F D +++G PD + V+++ + G++ +A ++++
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
Q + + +I AGK+ A + K+ R + V Y+ + L +G
Sbjct: 387 EMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
Query: 506 RTPDACTFYDQMKENG 521
+ +A M E G
Sbjct: 447 KVLEAHEVVKDMVEKG 462
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/485 (19%), Positives = 206/485 (42%), Gaps = 34/485 (7%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
P+ F + + + G + A VF ++ N FT+ + S +
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF-RL 171
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M++ P+ F +L + + +++ LG+ + V ++ + + G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
LD A K + M +V+ + +++ AY ++ + +A L M G +P LV WN+
Sbjct: 232 LDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM----FDLLPEPALVF 379
LI +++ G+ A+ + + + I D +T T+ +S + + M D+ + +
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRK--MFL 345
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
+ P+ V + +S + +E + + +++GF D L+ GK+ +
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A KV+ S + D +I +AG A +F + + + + I
Sbjct: 406 ARKVFD----SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 500 ALLRSGRTPDACTFYDQMKENG-LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIE 558
+++G +A + +M+++G ++ N T N+++ + + + ++ ++M SR
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAE--MREM-GLLPAK---ALHALS---SDKYAES 609
+ L+L P + +NLL +RE+ G + + A+HA+ +D YA+S
Sbjct: 522 PNSVTILSL--LP-------ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKS 572
Query: 610 LEEKY 614
+ +Y
Sbjct: 573 GDIEY 577
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 142/333 (42%), Gaps = 10/333 (3%)
Query: 114 FLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQ 173
F+ L++ +AG +H++ S+ V + N ++ G L A + F +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 174 P----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDAL 229
PN +F+I + + + ML M P+ T++SL+ + D +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDE-MLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
+A LL M+ I+ + + +L+ C G + A KL+ +M + GC P +V Y L
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
+ + R+ +A L M+ PD+V++N+L++ R +A V + +
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 350 QPDPYTLTSWLSMICQSRMFDL---LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAA 406
+P+ T + C+ FD + L R+ F +++ L+K G+ A
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFV-CMVAGLIKGGNLDHAC 416
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAA-GKIY 438
++M + + ++ LLS LC G +Y
Sbjct: 417 FVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVY 449
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 142/357 (39%), Gaps = 52/357 (14%)
Query: 208 HYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA 267
H YP ++ SL+ K Q+L L+ ++ +++ LI + + G +D A
Sbjct: 79 HDYP---SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 268 NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
+ + C + + TLI +++ + A + F+ + P+ V +N+LI
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKG 195
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLV 387
+ A VF + + +QP T
Sbjct: 196 FLDKCDWEAACKVFDEMLEMEVQPSVVTY------------------------------- 224
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV---- 443
N+L+ +L + A + MI+ P+ +F +L+ LC G+ EA K+
Sbjct: 225 --NSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM 282
Query: 444 -YRG---GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
YRG G+++ + +++ +L K G+ A + + R+ D V Y + +
Sbjct: 283 EYRGCKPGLVN--------YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
L R P+A +M+ G KPNA T MM+ F + +D +L M+ SR
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 198/494 (40%), Gaps = 53/494 (10%)
Query: 61 FFWSSQRRRDHQSV-TVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLR 119
F W+S++ + + M +L R R++ +L+A+++ + + C ++ P +F +R
Sbjct: 93 FNWASKQEGYRNDMYAYNAMASILSR-ARQNASLKALVVDVLNSRCFMS--PGAFGFFIR 149
Query: 120 ILWRAGMHAMFFQAYHQMQSYGF-VPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFF 178
L AG+ + +++ G VPN + N ++A I N
Sbjct: 150 CLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEA----------------ISKSNSS 193
Query: 179 TFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGL 238
+ ++ L K M ++ + T +L + A +
Sbjct: 194 SVELVEARL--------------KEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNE 239
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
++ G ++ TIL+ C+ G +D A +L++ + N TY LI +++ +R
Sbjct: 240 ILSRG-WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESR 298
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
+ A LF MR G D+ L++VLI K + AL ++ + + I PD L
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG- 357
Query: 359 WLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
++C F E + + I D+ + +L Y ++ I
Sbjct: 358 --KLLCS---FSEESELSRITEVIIGDIDKKSVMLLY----------KSLFEGFIRNDLV 402
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
+ YSF L + + E VK+ + + D+ +++I L+KA K MA T+
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDH-NKAILPDSDSLSIVINCLVKANKVDMAVTL 461
Query: 479 FKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
V + Y I + + GR+ ++ +MK+ G++P+ T N + +
Sbjct: 462 LHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAE 521
Query: 539 EKDLQKVNQMLKEM 552
D +LK+M
Sbjct: 522 RCDFVGALDLLKKM 535
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 22/319 (6%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ T + + + + A LL M G + + T L+ K C+ G A K
Sbjct: 507 PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKY 566
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L ++ G ++V T I +++ V LF + + GH PD++ ++VLI K
Sbjct: 567 LDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCK 626
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID---PDLV 387
A R +A +F + + ++P T S + C+ D +V Y D PD++
Sbjct: 627 ACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID-RGLSCIVRMYEDEKNPDVI 685
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
+L+ L +G PS+A ++ M P++ +F L+ LC G EA+ +R
Sbjct: 686 TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745
Query: 448 VMSSQETDARIH-----TVIIVELIKAG----KYLMAATVFKQAVVRKYPL--------- 489
E D+ ++ + + E I AG + ++ F +V R Y L
Sbjct: 746 EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFV 805
Query: 490 DNVAYAVGICALLRSGRTP 508
+++ + + L++ GR P
Sbjct: 806 EDLRTSCYLTCLIKDGRIP 824
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 165/398 (41%), Gaps = 16/398 (4%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P++++ ++N K + + A LL +V G+ ++ +I C+ G + + KL
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L M G P+ T + E A +L MR G P + L+ +
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-----PD 385
GR DA ++ + T+ + + ++ D E +FR I PD
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLE---LFRDICANGHCPD 613
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
++ + L+ L KA +A ++ M+ G P ++ ++ C G+I +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK---YPLDNVAYAVGICALL 502
+ D +T +I L +G+ + +F+ ++ YP + + + I L
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGR--PSEAIFRWNEMKGKDCYP-NRITFMALIQGLC 730
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI-GSRIELS- 560
+ G + +A ++ +M+E ++P++ ++ +F +++ + +EM+ R +S
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSV 790
Query: 561 DRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKAL 598
DRN++ N + TS L + + G +P A+
Sbjct: 791 DRNYMLAVNVTSKFVEDLRTSCYLTCLIKDGRIPILAV 828
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 149/395 (37%), Gaps = 69/395 (17%)
Query: 262 GILDVANKLLQNMLHTG-CSPNVVTYTTLIKAYMESN--RVTDASNLFNHMRSAGHTPDL 318
G++D A+ + + G C PN TY L++A +SN V MR G D
Sbjct: 155 GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDK 214
Query: 319 VLWNVLIDCHSKAGRHQDALGVFRS-LSKQNIQPDPYTL-----TSWLSMICQSRMFDLL 372
++ + G+ + AL VF LS+ + T+ W + + ++L
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEML 274
Query: 373 PEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
E + Y +C L+ VK A + ++ M +G D + VL+ LC
Sbjct: 275 EERDIRLNY----KTYC-VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 433 AAGKIYEAVKVY----RGGV-------------MSSQETDARIHTVIIVELIKAGKYLMA 475
+ A+ +Y R G+ S + +RI VII ++ K L+
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLY 389
Query: 476 ATVFK---------------QAVVRKYPLDNVAYAVG-------------------ICAL 501
++F+ Q ++ Y D V+ V I L
Sbjct: 390 KSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCL 449
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
+++ + A T + +NGL P N ++ KE ++ ++L EM + +E S
Sbjct: 450 VKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS- 508
Query: 562 RNFLNLCNFPCRSDA--YYSTSNLLAEMREMGLLP 594
F C + C ++ + +LL +MR G P
Sbjct: 509 -QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 130/311 (41%), Gaps = 15/311 (4%)
Query: 166 LTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
L+ + P+ T++I L H + M++ P TF +L++ K
Sbjct: 141 LSSIDEFGKPDACTYNI-LIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 226 MDALLEAYQLL-GLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVV 284
+ EA ++ ++ V G++ +V+++ LI CQ+G L A KL +
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL 344
Y+TLI + +++ R + S + M G PD V +NVLI+ + A V +
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 345 SKQNIQPDPYTLTSWLSMICQSR-------MFDLLPEPALVFRYIDPDLVFCNALLSYLV 397
++ ++PD + L + + + +F+ +P R PD + + L
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR-----RGCSPDTLSYRIVFDGLC 374
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
+ +AA D M+ G+ P + L LC +GK+ KV + DA
Sbjct: 375 EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVI-SSLHRGIAGDAD 433
Query: 458 IHTVIIVELIK 468
+ +V+I + K
Sbjct: 434 VWSVMIPTMCK 444
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 316 PDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEP 375
PD +N+LI S++G DAL +F + K+ ++P T + + +C+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK---------- 199
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
++ + +K H D++ G P + +A L+ ALC G
Sbjct: 200 --------------DSRVKEALKMKH--------DMLKVYGVRPTVHIYASLIKALCQIG 237
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
++ A K+ + DA I++ +I LIKAG+ + + ++ + D V Y
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYN 297
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
V I + A D+M E GLKP+ + NM+L F++ K ++ + ++M
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDM 354
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
PD N L+ ++G DA + +D M++ P +F L+ LC ++ EA+K+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 444 YRG--GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
V + T I+ +I L + G+ A + +A K +D Y+ I +L
Sbjct: 210 KHDMLKVYGVRPT-VHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
+++GR+ + ++M E G KP+ T N+++ F E D + N++L EM+ ++
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYAESLEEKYEHCAEVN 621
++ + R + + L +M G P + + D E L+ +E A +
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ--FEEAAVIL 386
Query: 622 TEL 624
E+
Sbjct: 387 DEM 389
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 151/397 (38%), Gaps = 22/397 (5%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P F +++N F + A + M Q +V L+ + G L+ +
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L ++ G P+ TY LI +S DA LF+ M P V + LI K
Sbjct: 141 LSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 331 AGRHQDALGVFRSLSK-QNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP----- 384
R ++AL + + K ++P + S + +CQ + E + F+ D
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQ------IGELSFAFKLKDEAYEGK 253
Query: 385 ---DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
D + L+S L+KAG ++ + + M E G PD ++ VL++ C A
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+V V + D + +I+ + K+ A +F+ R D ++Y + L
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ---KVNQMLKEMIGSRIE 558
+ +A D+M G KP L + L+ KV L I +
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDAD 433
Query: 559 LSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA 595
+ +C P SD S LL ++E G L A
Sbjct: 434 VWSVMIPTMCKEPVISD---SIDLLLNTVKEDGPLSA 467
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 173/428 (40%), Gaps = 57/428 (13%)
Query: 47 RENVRSSDLIALSCFFWS-SQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGC 105
R++ RS AL W+ S + H S D V +LG+ ++ ++ + ++
Sbjct: 98 RDDWRS----ALGILKWAESCKGHKHSSDAYDMAVDILGK-AKKWDRMKEFVERMRGDKL 152
Query: 106 ILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLA 165
+ N+ ++R AG + ++ +G NT + NL +D + + A
Sbjct: 153 VTL---NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA 209
Query: 166 LTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
V Q L+ H PNA+TF+ ++ + K
Sbjct: 210 RVVLLQ---------------------------------LKSHITPNAHTFNIFIHGWCK 236
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
+ + EA + M G + V +T +I +CQ ++L M G PN +T
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR-SL 344
YTT++ + +A + M+ +G PD + +N LI ++AGR ++A VFR +
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 345 SKQNIQPDPYTLTSWLSMIC----QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAG 400
+ + + T S ++M C + + +LL E +PD+ LL K G
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME-SSNLCNPDVHTYQPLLRSCFKRG 415
Query: 401 HPSDAAEFYDLMIEL----GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
D E L+ E+ + D+ ++ L+ LC A A ++ M SQ+
Sbjct: 416 ---DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE--MISQDITP 470
Query: 457 RIHTVIIV 464
R T +++
Sbjct: 471 RHRTCLLL 478
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 39/321 (12%)
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH-TPDLVLWNVLIDCHSKAGRHQD 336
G N + L+ + RV A + ++S H TP+ +N+ I KA R ++
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIHGWCKANRVEE 242
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYL 396
AL + + +P + T+ + CQ F +I V+ +LS +
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQ------------FEFIK---VY--EMLSEM 285
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
G P P+ ++ ++S+L A + EA++V S + D+
Sbjct: 286 EANGSP----------------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVR-KYPLDNVAYAVGICALLRSGRTPDACTFYD 515
+ +I L +AG+ A VF+ + ++ Y I A
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 516 QMKENGL-KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS-RIELSDRNFLNLCNFPCR 573
+M+ + L P+ HT +L + +K D+ +V ++LKEM+ + L + + L CR
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 574 SDAYYSTSNLLAEMREMGLLP 594
++ L EM + P
Sbjct: 450 ANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 173/428 (40%), Gaps = 57/428 (13%)
Query: 47 RENVRSSDLIALSCFFWS-SQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGC 105
R++ RS AL W+ S + H S D V +LG+ ++ ++ + ++
Sbjct: 98 RDDWRS----ALGILKWAESCKGHKHSSDAYDMAVDILGK-AKKWDRMKEFVERMRGDKL 152
Query: 106 ILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLA 165
+ N+ ++R AG + ++ +G NT + NL +D + + A
Sbjct: 153 VTL---NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA 209
Query: 166 LTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
V Q L+ H PNA+TF+ ++ + K
Sbjct: 210 RVVLLQ---------------------------------LKSHITPNAHTFNIFIHGWCK 236
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
+ + EA + M G + V +T +I +CQ ++L M G PN +T
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR-SL 344
YTT++ + +A + M+ +G PD + +N LI ++AGR ++A VFR +
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 345 SKQNIQPDPYTLTSWLSMIC----QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAG 400
+ + + T S ++M C + + +LL E +PD+ LL K G
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME-SSNLCNPDVHTYQPLLRSCFKRG 415
Query: 401 HPSDAAEFYDLMIEL----GFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
D E L+ E+ + D+ ++ L+ LC A A ++ M SQ+
Sbjct: 416 ---DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE--MISQDITP 470
Query: 457 RIHTVIIV 464
R T +++
Sbjct: 471 RHRTCLLL 478
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 39/321 (12%)
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGH-TPDLVLWNVLIDCHSKAGRHQD 336
G N + L+ + RV A + ++S H TP+ +N+ I KA R ++
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIHGWCKANRVEE 242
Query: 337 ALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYL 396
AL + + +P + T+ + CQ F +I V+ +LS +
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQ------------FEFIK---VY--EMLSEM 285
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
G P P+ ++ ++S+L A + EA++V S + D+
Sbjct: 286 EANGSP----------------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVR-KYPLDNVAYAVGICALLRSGRTPDACTFYD 515
+ +I L +AG+ A VF+ + ++ Y I A
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 516 QMKENGL-KPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGS-RIELSDRNFLNLCNFPCR 573
+M+ + L P+ HT +L + +K D+ +V ++LKEM+ + L + + L CR
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 574 SDAYYSTSNLLAEMREMGLLP 594
++ L EM + P
Sbjct: 450 ANMCEWAYCLFEEMISQDITP 470
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 49/384 (12%)
Query: 161 NLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLL 220
NL A +VF+ I P+ + ++ + SN + MLR Y P+ TF +L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY-QEMLRKGYSPDYFTFPYVL 114
Query: 221 NAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS 280
A + + + G +V G + ++ V T L+H + G ++ ++ +++
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW--- 171
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG-HTPDLVLWNVLIDCHSKAGRHQDAL- 338
NVV + +LI ++ +NR +DA F M+S G + ++ ++L+ C GR +D +
Sbjct: 172 -NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC----GRCKDIVT 226
Query: 339 GVFRSLSKQNIQPDPY----------TLTSWLSMICQSR-------MFDLLPEPALVFRY 381
G + Q + DPY TS + M + +FD +PE LV
Sbjct: 227 GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSW- 285
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG--KIYE 439
N++++ + G +A + M++LG APDK +F ++ A G ++ +
Sbjct: 286 --------NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQ 337
Query: 440 AVKVY--RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
++ Y + G + DA I ++ K G A F+ + D +A+ V
Sbjct: 338 SIHAYVSKTGFVK----DAAIVCALVNMYAKTGDAESAKKAFEDLEKK----DTIAWTVV 389
Query: 498 ICALLRSGRTPDACTFYDQMKENG 521
I L G +A + + +M+E G
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKG 413
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 50/317 (15%)
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN--------VWTILIHKHCQLGILDVAN 268
H L +AF + L EA + + VL Q + + +L++ + G+ + A+
Sbjct: 87 HGLYSAFIRR--LREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAH 142
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM-RSAGHTPDLVLWNVLIDC 327
KL M C V ++ L+ AY+ S ++ +A F + G TPDLV +N +I
Sbjct: 143 KLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKA 202
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS-------MICQSRMFDLLPEPAL--- 377
+ G D L +F L K +PD + + L + R++DL+ L
Sbjct: 203 LCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPN 262
Query: 378 VFRY---------------------------IDPDLVFCNALLSYLVKAGHPSDAAEFYD 410
+ Y I PD+ NAL++ + + + Y+
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 411 LMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAG 470
M E G PD ++ +L+ LC G + AV+V + + ++ ++ L+ AG
Sbjct: 323 EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAG 382
Query: 471 KYLMAATVFKQAVVRKY 487
K A + K ++ Y
Sbjct: 383 KIDEATQLVKNGKLQSY 399
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 138 QSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXX 197
+ G P+ N + A R G++ L++F++++ F
Sbjct: 185 EKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGF-------------------- 224
Query: 198 XXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHK 257
P+ +F++LL F++ + +E ++ LM + ++ + +
Sbjct: 225 ------------EPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 258 HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
+ A L+ M G SP+V TY LI AY N + + +N M+ G TPD
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 318 LVLWNVLIDCHSKAGRHQDALGV 340
V + +LI K G A+ V
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEV 355
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 36/192 (18%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLG-LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
+F++LL+A+ L EA + L LGI + + +I C+ G +D + +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 274 MLHTGCSPNVVTYTTLIKAY------MESNRV---------------------------- 299
+ G P+++++ TL++ + +E +R+
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 300 -TDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
TDA NL + M++ G +PD+ +N LI + ++ + + + ++ + PD T
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 359 WLSMICQSRMFD 370
+ ++C+ D
Sbjct: 339 LIPLLCKKGDLD 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 46/263 (17%)
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSL-SKQNIQPDPYTLTSWL 360
A LF+ M + +N L+ + + + +A+ F+ L K I PD T + +
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 361 SMIC-QSRMFDLLPEPALVFRYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIE 414
+C + M D+L +F ++ PDL+ N LL + + +DLM
Sbjct: 201 KALCRKGSMDDILS----IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 415 LGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLM 474
+P+ S+ + L K +A+ + VM ++ +HT
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLI--DVMKTEGISPDVHTY------------- 301
Query: 475 AATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLF 534
A++ Y +DN V C Y++MKE GL P+ T M++
Sbjct: 302 ------NALITAYRVDNNLEEVMKC--------------YNEMKEKGLTPDTVTYCMLIP 341
Query: 535 TFYKEKDLQKVNQMLKEMIGSRI 557
K+ DL + ++ +E I ++
Sbjct: 342 LLCKKGDLDRAVEVSEEAIKHKL 364
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 151/349 (43%), Gaps = 31/349 (8%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
T+ ++L+ F + + Y + LM G+ +T LIH G +D A +L + M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
GC P VV+YT +K RV +A+ ++ M + +P+ + VL++ G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-------SRMFDLLPEPALVFRYIDPDLV 387
++AL +F + + +QPD ++ + +R+ + E +V RY P +
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRY--P--I 299
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
F AL + +KA SD DL+ E+ + + + +LC++ I E
Sbjct: 300 FVEALET--LKAAGESD-----DLLREV-------NSHISVESLCSSD-IDETPTAEVND 344
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+S D+R+ + + L+ + + Q R LD+ + I RT
Sbjct: 345 TKNSD--DSRVISSV---LLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRT 399
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
A +D E G+ ++ F + +L KV +++KEM+ ++
Sbjct: 400 EGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQ 448
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 119/532 (22%), Positives = 208/532 (39%), Gaps = 76/532 (14%)
Query: 130 FFQAYHQMQSYGFVPNTF--ARNLFMDAHFRIGNLHLALTVFQQIQP-PNFFTFDITLFH 186
F Q Q+ + + +TF +R +F A NL LA +F P PN F ++ +
Sbjct: 50 FKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISA 109
Query: 187 LSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLG-IQ 245
+S+ M+R P+ TF L+ A L E Q+ ++V G +
Sbjct: 110 VSSSKNECFGLYSS---MIRHRVSPDRQTFLYLMKA---SSFLSEVKQIHCHIIVSGCLS 163
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
+W L+ + +LG VA K+ M H P+V ++ +I Y + +A L
Sbjct: 164 LGNYLWNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAKQGFSLEALKL 219
Query: 306 FNHMRSAGHTPD-------------------------------------LVLWNVLIDCH 328
+ M S G PD L+L N L+D +
Sbjct: 220 YFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMY 279
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRMFDLLPEPALVFRYIDPDLV 387
K A F ++ K++++ SW +M+ R+ D+ A+ + DLV
Sbjct: 280 FKCKESGLAKRAFDAMKKKDMR-------SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 388 FCNALLSYLVKAGHPSDAAE--FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
N+LL K G FY++ I PD+ + L+S G++ V+
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
+ + DA + + +I K G A VFK A + D + I L G
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK----DVALWTSMITGLAFHG 448
Query: 506 RTPDACTFYDQMKENGLKPNAHTCNMML----FTFYKEKDLQKVNQMLKEMIGSRIELSD 561
A + +M+E G+ PN T +L + E+ L N M K+ G +
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM-KDKFG--FDPET 505
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHA--LSSDKYAESLE 611
++ +L + CR+ +++ ++M + P++++ LS+ + E +E
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIV--QKKMPMRPSQSMWGSILSACRGGEDIE 555
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 166/392 (42%), Gaps = 15/392 (3%)
Query: 52 SSDLIALSCFFWS-SQRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKN 110
++ ++ALS F W+ +Q+ H + + ++ LG++ K + I ++ + +
Sbjct: 106 NAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKI----KQFKLIWSLVDDMKAKKLLS 161
Query: 111 PNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQ 170
+F L+ R RA A+H+M+ +GF + N +D + N+ A VF
Sbjct: 162 KETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFD 221
Query: 171 QIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM 226
+++ P+ ++ I L + M + P+ + ++NA K
Sbjct: 222 KMKKKRFEPDIKSYTI-LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 227 DALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTY 286
EA + M + S +++ LI+ L+ A + + +G TY
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 287 TTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK 346
L+ AY S R+ DA + MR G P+ +++++ + R ++A V++++S
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS- 399
Query: 347 QNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSD 404
+P T + M C D+ + + + + P + ++L++ L +
Sbjct: 400 --CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 405 AAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
A E+++ M+++G P + F+ L L G+
Sbjct: 458 ACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 128/292 (43%), Gaps = 13/292 (4%)
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
A K+ M P++ +YT L++ + + + + M+ G PD+V + ++I+
Sbjct: 216 AQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIIN 275
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDL 386
H KA ++++A+ F + ++N +P P+ S ++ + + + AL F
Sbjct: 276 AHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN----DALEFFERSKSS 331
Query: 387 VFC------NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
F NAL+ + DA + D M G P+ ++ ++L L + EA
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 441 VKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICA 500
+VY+ MS + T + +++ + MA ++ + + ++ I A
Sbjct: 392 YEVYQ--TMSCEPT-VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 501 LLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
L + +AC ++++M + G++P H + + T E KV ++ +M
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 52/339 (15%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN--- 268
N +S+L+ K L +L M G++ V + L+ G + V N
Sbjct: 165 NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL-----AGCIKVKNGYP 219
Query: 269 ---KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
+L+ + H G + V Y T++ + R +A N M+ GH+P++ ++ L+
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALVFRY 381
+ +S G ++ A + + + P+ +T+ L + + +FD LL E Y
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA-GY 338
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ ++ +C L+ L KAG +A +D M G D Y+ ++++SALC + + EA
Sbjct: 339 AENEMPYC-MLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK 397
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
++ R + ++ D +M T+ +CA
Sbjct: 398 ELSRDSETTYEKCD----------------LVMLNTM-------------------LCAY 422
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
R+G +M E + P+ +T ++++ F KEK
Sbjct: 423 CRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 140/320 (43%), Gaps = 12/320 (3%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
+V TY++ IK ++ + V+ A ++ + ++ + N ++ C K G+ + +F
Sbjct: 131 SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQ-----SRMFDLLPEPALVFRYIDPDLVFCNALLSYL 396
+ + ++PD T + L+ + + +L+ E L I D V +L+
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGE--LPHNGIQMDSVMYGTVLAIC 247
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
G +A F M G +P+ Y ++ LL++ G +A ++ +
Sbjct: 248 ASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNK 307
Query: 457 RIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQ 516
+ T ++ IK G + + + + Y + + Y + + L ++G+ +A + +D
Sbjct: 308 VMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDD 367
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLN--LCNFPCRS 574
MK G++ + + ++M+ + K ++ ++ ++ + E D LN LC + CR+
Sbjct: 368 MKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS-ETTYEKCDLVMLNTMLCAY-CRA 425
Query: 575 DAYYSTSNLLAEMREMGLLP 594
S ++ +M E + P
Sbjct: 426 GEMESVMRMMKKMDEQAVSP 445
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%), Gaps = 43/327 (13%)
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDI 182
R ++ + + +M G +P+ + +D + + G + L++++
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE------------ 280
Query: 183 TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVL 242
R + + P+A F L F + +L M +
Sbjct: 281 --------------------RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM 320
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
++ +V V+ L+ + G +A L ML G +PN T T L+K Y ++ DA
Sbjct: 321 DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDA 380
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQ--PDPYTLTSWL 360
L+ M++ D +L+N L++ + G ++A +F + K+++Q PD ++ T+ L
Sbjct: 381 LQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSYTAML 439
Query: 361 SMICQ----SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG 416
++ + +L E ++ + +++ C L+ L KA D +DL I+ G
Sbjct: 440 NIYGSGGKAEKAMELFEE--MLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 417 FAPDKYSFAVLLS--ALCAAGKIYEAV 441
PD LLS ALC + + E V
Sbjct: 498 VKPDDRLCGCLLSVMALCESSEDAEKV 524
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 13/265 (4%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
+RM + P+ T+ ++L+ + K + E L V G + +++L +
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G D +LQ M PNVV Y TL++A + + A +LFN M AG TP+
Sbjct: 305 GDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTL 364
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC--------QSRMFDLLP 373
L+ + KA +DAL ++ + K P + L + L +C R+F+ +
Sbjct: 365 TALVKIYGKARWARDALQLWEEM-KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Query: 374 EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
E PD A+L+ G A E ++ M++ G + L+ L
Sbjct: 424 ESV----QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGK 479
Query: 434 AGKIYEAVKVYRGGVMSSQETDARI 458
A +I + V V+ + + D R+
Sbjct: 480 AKRIDDVVYVFDLSIKRGVKPDDRL 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 129/326 (39%), Gaps = 36/326 (11%)
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
MV G++ ++ +I + + + A + + M TG P+ VTY+ ++ Y +S +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
V + +L+ + G PD + ++VL +AG + V + + +++
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVK-------- 323
Query: 359 WLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA 418
P++V N LL + +AG P A ++ M+E G
Sbjct: 324 -------------------------PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 419 PDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATV 478
P++ + L+ A +A++++ D ++ ++ G A +
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 479 FK--QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTF 536
F + V+ P DN +Y + G+ A +++M + G++ N C ++
Sbjct: 419 FNDMKESVQCRP-DNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 537 YKEKDLQKVNQMLKEMIGSRIELSDR 562
K K + V + I ++ DR
Sbjct: 478 GKAKRIDDVVYVFDLSIKRGVKPDDR 503
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 367 RMFDLLPEPAL--VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
R F L+ E AL V ++ D + + +++ + + A E+++ M + G PD+ ++
Sbjct: 200 RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
+ +L +GK+ E + +Y V + + DA +V+ +AG Y V ++
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ V Y + A+ R+G+ A + +++M E GL PN T ++ + K + +
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 545 VNQMLKEMIGSRIELS---DRNFLNLC 568
Q+ +EM + + LN+C
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMC 406
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 58/284 (20%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT--ILIHKHCQ 260
RM H P+ +++++NA ++ +A LL M + G ++ + +T ILI +C+
Sbjct: 190 RMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCR 249
Query: 261 LGI-----------LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
G+ + AN++ + ML G P+VVTY LI ++NR+ A LF M
Sbjct: 250 YGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDM 309
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK-QNIQPDPYTLTSWLSMICQSRM 368
++ G P+ V +N I +S + A+ + R++ K + P T T
Sbjct: 310 KTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT----------- 358
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLL 428
L+ LV+ ++A + M+E G P +Y++ ++
Sbjct: 359 ----------------------PLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 429 SALCAAG-----------KIYEAVKVYRGGVMSSQETDARIHTV 461
AL + G ++ E ++ VM + T AR V
Sbjct: 397 DALSSEGLASTLDEELHKRMREGIQQRYSRVMKIKPTMARKEVV 440
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 38/244 (15%)
Query: 381 YIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF--APDKYSFAVLLSALCAAGKIY 438
+ PD+ N +++ L + G+ A D M GF PD Y++ +L+S+ C G
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG--- 251
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLM--AATVFKQAVVRKYPLDNVAYAV 496
+T R KA + M A +F++ + R + D V Y
Sbjct: 252 -------------MQTGCR----------KAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM--IG 554
I ++ R A ++ MK G PN T N + + +++ +M++ M +G
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 555 SRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALH-----ALSSDKYAES 609
+ S + L + + +L+ EM E GL+P + + ALSS+ A +
Sbjct: 349 HGVPGSS-TYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAST 407
Query: 610 LEEK 613
L+E+
Sbjct: 408 LDEE 411
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 22/323 (6%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ TF L+ D L +A ++ M V G V++ L+ + D KL
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 271 LQNMLHT--GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL----WNVL 324
Q + G + V Y L+K Y +A + + G + + +N +
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE--AVGENSKVRMSAMAYNYV 316
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQP-----DPYTLTSWLSMICQSRMFDLLPEPALVF 379
++ S+ G+ +AL +F ++ K++ P + T ++ C F+ E VF
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE---EAMEVF 373
Query: 380 RYI-----DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAA 434
R + PD + N L++ L ++A + Y M E PD+Y++ +L+
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 435 GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
GKI E Y+ V S+ + ++ + +LIKAGK L A F +V K +D+ AY
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGK-LDDAKSFFDMMVSKLKMDDEAY 492
Query: 495 AVGICALLRSGRTPDACTFYDQM 517
+ AL +GR + D+M
Sbjct: 493 KFIMRALSEAGRLDEMLKIVDEM 515
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 131/303 (43%), Gaps = 30/303 (9%)
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFN-HMRSAGHTPDLVLWNVLIDCHSKAGRH 334
G +PN++TY + +AY++ + A + + +A P + + +L+
Sbjct: 158 QAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNL 217
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQS--------RMFDLLPEPALVFRYIDPDL 386
+ A+ + ++ + DP + S+L M C +++ L E + ++D +
Sbjct: 218 EKAMEIKEDMAVKGFVVDP-VVYSYLMMGCVKNSDADGVLKLYQELKEK--LGGFVDDGV 274
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMI----ELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
V+ + Y +K +A E Y+ + ++ + Y++ +L AL GK EA+K
Sbjct: 275 VYGQLMKGYFMKEME-KEAMECYEEAVGENSKVRMSAMAYNY--VLEALSENGKFDEALK 331
Query: 443 VYRGGVMSSQETDARIH--------TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
++ +E + H V++ GK+ A VF+Q K D +++
Sbjct: 332 LFDA---VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSF 388
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
+ L + +A Y +M+E +KP+ +T +++ T +KE + + K M+
Sbjct: 389 NNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE 448
Query: 555 SRI 557
S +
Sbjct: 449 SNL 451
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 159/368 (43%), Gaps = 39/368 (10%)
Query: 104 GC-ILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNL 162
GC I T+ N+ ++L G+ F+ Y M+ + + L + + + G L
Sbjct: 273 GCKIDTQTYNNLMMLF---LNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRL 329
Query: 163 HLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
A +FQQ++ +R LR P+ + F SL+++
Sbjct: 330 DAAFKLFQQMK----------------------------ERKLR----PSFSVFSSLVDS 357
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
K L + ++ M G + S ++ LI + + G LD A +L M +G PN
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
YT +I+++ +S ++ A +F M AG P ++ L++ H+ +G+ A+ ++
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYN 477
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNA-LLSYLVKAGH 401
S++ ++P + S L+++ R+ D+ + L + + + C + +L +K
Sbjct: 478 SMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDAS 537
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK-VYRGGVMSSQETDARIHT 460
A ++ M G + + L + C +Y++ + + V S+ + D ++T
Sbjct: 538 VDLALKWLRFMGSSGIKTNNFIIRQLFES-CMKNGLYDSARPLLETLVHSAGKVDLVLYT 596
Query: 461 VIIVELIK 468
I+ L++
Sbjct: 597 SILAHLVR 604
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 116/307 (37%), Gaps = 33/307 (10%)
Query: 246 FSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL 305
S N + +I + L+VA + +GC + TY L+ ++ A +
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 306 FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
+ M D + ++I +K+GR A +F+ + ++ ++P +S
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSS------- 353
Query: 366 SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
L+ + KAG + + Y M G P F
Sbjct: 354 --------------------------LVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 426 VLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR 485
L+ + AGK+ A++++ S + ++T+II K+GK +A TVFK
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
+ Y+ + SG+ A Y+ M GL+P + +L ++ +
Sbjct: 448 GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVA 507
Query: 546 NQMLKEM 552
++L EM
Sbjct: 508 GKILLEM 514
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 147/367 (40%), Gaps = 11/367 (2%)
Query: 160 GNLHLALTVFQQIQPPNFFTFDITLFHLS-NXXXXXXXXXXXXKRMLRMHYYPNANTFHS 218
G++ A VF + P F ++ + S N ++ R+ P++ TF
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS--PDSFTFPH 124
Query: 219 LLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTG 278
LL A + L + + LG V V LI + + L A + + +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP- 183
Query: 279 CSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
+V++T ++ AY ++ +A +F+ MR PD V +++ + +
Sbjct: 184 -ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
+ S+ K ++ +P L S +M ++ + L + P+L+ NA++S K
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMY--AKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI 458
G+ +A + + MI PD S +SA G + +A +Y S D I
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
+ +I K G A VF + + R D V ++ I GR +A + Y M+
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 519 ENGLKPN 525
G+ PN
Sbjct: 417 RGGVHPN 423
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 163/381 (42%), Gaps = 54/381 (14%)
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
R+ N T+ ++++ + + L A L M + +V W +I + Q G +D
Sbjct: 102 RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRID 157
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
A +L M N+V++ +++KA ++ R+ +A NLF M D+V W ++
Sbjct: 158 KALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMV 209
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC----------QSRMFDLLPEP 375
D +K G+ +A +F + ++NI SW +MI ++F ++PE
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNI-------ISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 376 ----------------------ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
L R + +++ +++ V+ +A + M+
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 414 ELG-FAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKY 472
G P+ ++ +LSA + E ++++ S + + + + ++ K+G+
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
+ A +F +V + L +++ I G +A Y+QM+++G KP+A T +
Sbjct: 383 IAARKMFDNGLVCQRDL--ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 533 LFTFYKEKDLQKVNQMLKEMI 553
LF ++K + K+++
Sbjct: 441 LFACSHAGLVEKGMEFFKDLV 461
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 152/371 (40%), Gaps = 53/371 (14%)
Query: 145 NTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRM 204
N + N +D + + G + AL +F ++ N +++ + L +RM
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLF-ERM 197
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
R ++ ++++ K + EA +L M + ++ W +I + Q +
Sbjct: 198 PRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRI 249
Query: 265 DVANKLLQNM--------------------LHTGCS-------PNVVTYTTLIKAYMESN 297
D A++L Q M ++ C NV+++TT+I Y+E+
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 298 RVTDASNLFNHM-RSAGHTPDLVLW-NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT 355
+A N+F+ M R P++ + ++L C AG + + + +SK Q +
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG-LVEGQQIHQLISKSVHQKNEIV 368
Query: 356 LTSWLSMICQS-------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEF 408
++ L+M +S +MFD LV + DL+ N++++ GH +A E
Sbjct: 369 TSALLNMYSKSGELIAARKMFD----NGLVCQR---DLISWNSMIAVYAHHGHGKEAIEM 421
Query: 409 YDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIK 468
Y+ M + GF P ++ LL A AG + + ++ ++ V H +V+L
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
Query: 469 AGKYLMAATVF 479
L T F
Sbjct: 482 RAGRLKDVTNF 492
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 48/285 (16%)
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
Q +L G S + ++L+ Y + + A +F MR D+V W +I C+S+A
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE----RDVVHWTAMIGCYSRA 125
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNA 391
G +A + + Q I+P P TL LS + + L + A+++ + D D+ N+
Sbjct: 126 GIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGF-DCDIAVMNS 184
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK-VYR---GG 447
+L+ K H DA + +D M + D S+ ++S + G + E +K +YR G
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQ----RDMVSWNTMISGYASVGNMSEILKLLYRMRGDG 240
Query: 448 VMSSQET-------------------------------DARIHTVIIVELIKAGKYLMAA 476
+ Q+T D + T +I +K GK +
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 477 TVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENG 521
V + + K D V + V I L+R GR A + +M ++G
Sbjct: 301 RVL-ETIPNK---DVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 173/468 (36%), Gaps = 91/468 (19%)
Query: 125 GMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITL 184
G H + M + +P+TF + A + L L++ QQ+ N F+ D
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV-LVNGFSSD--- 80
Query: 185 FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGI 244
F++S+ SL+N + K L A ++ M
Sbjct: 81 FYISS----------------------------SLVNLYAKFGLLAHARKVFEEMR---- 108
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT------------------- 285
+ V WT +I + + GI+ A L+ M G P VT
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHD 168
Query: 286 -------------YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
+++ Y + + V DA +LF+ M D+V WN +I ++ G
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ----RDMVSWNTMISGYASVG 224
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSM---ICQSRMFDLLPEPALVFRYIDPDLVFC 389
+ L + + ++PD T + LS+ +C M +L +V D D+
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML-HCQIVKTGFDVDMHLK 283
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
AL++ +K G + ++E D + V++S L G+ +A+ V+ +
Sbjct: 284 TALITMYLKCGKEEASYR----VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
S + + ++ + G + + A+V + Y LD A I + G
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 510 ACTFYDQMKE----------NGLKPNAHTCN-MMLFTFYKEKDLQKVN 546
+ +++M E +G N C ++LF K K +Q+V+
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVD 447
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 168/396 (42%), Gaps = 63/396 (15%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P T+ S+ A+ ++ + QL G+++ G++ + ++H + G L A ++
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI 183
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
M+ +VV + ++I + + + A NLF+ M V WN +I +
Sbjct: 184 FLGMIGF----DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG----VSWNSMISGFVR 235
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTS---------------W-----------LSMIC 364
GR +DAL +FR + +++++PD +T+ S W L+ I
Sbjct: 236 NGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV 295
Query: 365 QSRMFDL------LPEPALVFRYIDPDLVFC-NALLSYLVKAGHPSDAAEFYDLMIELGF 417
+ + D+ + E VF + C N+++ L G A + + + G
Sbjct: 296 VTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGL 355
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ---ETDARIHTVIIVELIKAGKYLM 474
PD SF +L+A +G+++ A + +R +M + E + +T+++ L AG
Sbjct: 356 EPDSVSFIGVLTACAHSGEVHRADEFFR--LMKEKYMIEPSIKHYTLMVNVLGGAGLLEE 413
Query: 475 AATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLF 534
A + K V + D V ++ + A + G A +K+ L P+ TC +L
Sbjct: 414 AEALIKNMPVEE---DTVIWSSLLSACRKIGNVEMAKRAAKCLKK--LDPD-ETCGYVLL 467
Query: 535 T-----------FYKEKDLQKVNQMLKEMIGSRIEL 559
+ +++ L K QM KE+ S IE+
Sbjct: 468 SNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV 503
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 14/280 (5%)
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCS--PNVVTYTTLIKAYMESNRVTDASNLFN 307
VW +I + ++A + +ML + S P +TY ++ KAY + D L
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
+ G D + N ++ + G +A +F + + + +W SMI
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG-------FDVVAWNSMIMGFA 203
Query: 368 MFDLLPEPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
L+ + +F + + V N+++S V+ G DA + + M E PD ++
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 427 LLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK 486
LL+A G + ++ V + E ++ + T +I K G VF+ A ++
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNA 526
N I L +G A + +++ +GL+P++
Sbjct: 324 LSCWNSM----ILGLANNGFEERAMDLFSELERSGLEPDS 359
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 153/364 (42%), Gaps = 14/364 (3%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
R ++ P +TF+ L++ + A +L L+ G+ ++T LI + G
Sbjct: 457 RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSG 516
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+D ++ M ++G N+ T+ LI + +V A + +RS PD V++N
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQN--IQPDPYTLTSWLSMICQSRMFDLLPEP-ALVF 379
LI ++G A V + + I PD ++ + + C + + E ++
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH 636
Query: 380 RY-IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+Y I ++ K+G A Y M E PD+ F+ L+ A +
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELI----KAGKYLMAATVFKQ-AVVRKYPLDNVA 493
EA G + ++ R+ T+ L+ A + A ++++ ++ P +
Sbjct: 697 EAF----GILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMI 553
A+ I AL + P A + D++K GLKPN T +M++ ++ D + ++L +
Sbjct: 753 NAL-ITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAK 811
Query: 554 GSRI 557
G +
Sbjct: 812 GDGV 815
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 157/381 (41%), Gaps = 43/381 (11%)
Query: 218 SLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT 277
S A K A+ EA++ L+ + +++ + +L+ ++ A +L+ + +
Sbjct: 441 SFFKACKKQRAVKEAFRFTKLI----LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQES 496
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
G + + YTTLI + +S +V +F+ M ++G +L + LID ++AG+ A
Sbjct: 497 GMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKA 556
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLV 397
G + L +N++PD + +S QS D R D +L+ +
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVD---------RAFD--------VLAEMK 599
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY----RGGVMSSQE 453
HP D PD S L+ A C AG++ A +VY + G+ + E
Sbjct: 600 AETHPID--------------PDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 454 TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
++T+ + K+G + A +++K + D V ++ I + +A
Sbjct: 646 ----VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 514 YDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR 573
K G++ + + ++ KD +K ++ +++ ++ + L C
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 574 SDAYYSTSNLLAEMREMGLLP 594
+ L E++ +GL P
Sbjct: 762 GNQLPKAMEYLDEIKTLGLKP 782
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 180/471 (38%), Gaps = 98/471 (20%)
Query: 166 LTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
+++F+ PN FTF I L + M++M N+ +L++ + K
Sbjct: 149 VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCS-MIKMGLERNSYCGGALVDMYAK 207
Query: 226 MDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVT 285
D + +A ++ +V + WT L + + G+ + A + + M G P+ +
Sbjct: 208 CDRISDARRVFEWIV----DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
+ T+I Y+ ++ DA LF M S PD+V WNV+I H K G A+ F ++
Sbjct: 264 FVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDL--------------------------------LP 373
K +++ TL S LS I DL +
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 374 EPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALC 432
A VF + + + VF NA++ G E + M G+ D ++F LLS C
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST-C 438
Query: 433 AAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVF-KQAVVRKYPLDN 491
AA E M SQ H++II K +A +F A+V Y
Sbjct: 439 AASHDLE---------MGSQ-----FHSIII-------KKKLAKNLFVGNALVDMYA--- 474
Query: 492 VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKE 551
+ G DA +++M + + N T N ++ ++ ++++ + + K
Sbjct: 475 -----------KCGALEDARQIFERMCD---RDNV-TWNTIIGSYVQDENESEAFDLFKR 519
Query: 552 MIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALS 602
M NLC SD S L A GL K +H LS
Sbjct: 520 M-------------NLCGIV--SDGACLASTLKACTHVHGLYQGKQVHCLS 555
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 160/416 (38%), Gaps = 15/416 (3%)
Query: 142 FVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXX 201
N F N +D + + G L A +F+++ + T++ T+
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWN-TIIGSYVQDENESEAFDLF 517
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
KRM + S L A + L + Q+ L V G+ ++ + LI + +
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
GI+ A K+ ++ +VV+ LI Y ++N + +A LF M + G P + +
Sbjct: 578 GIIKDARKVFSSLPEW----SVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITF 632
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPD-PYTLTSWLSMICQSRMFDLLPEPALVFR 380
+++ K ++K+ + Y S L M SR + E +F
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG---MTEACALFS 689
Query: 381 YIDP--DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ +V ++S + G +A +FY M G PD+ +F +L +
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
E ++ + + D +I K G ++ VF + R + V++ I
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLI 806
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIG 554
++G DA +D M+++ + P+ T +L + ++ + MIG
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIG 862
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 30/318 (9%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
+++ LL F K ++EA Q M V V W +I + Q G +D A +L
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE- 275
Query: 275 LHTGCSP--NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
SP +V T+T ++ Y+++ V +A LF+ M V WN ++ + +
Sbjct: 276 -----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGE 326
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF-RYIDPDLVFCNA 391
R + A +F + +N+ ++W +MI + E +F + D V A
Sbjct: 327 RMEMAKELFDVMPCRNV-------STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG-VMS 450
+++ ++GH +A + M G ++ SF+ LS CA E K G V
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST-CADVVALELGKQLHGRLVKG 438
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
ET + +++ K G A +FK+ + D V++ I R G A
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVA 494
Query: 511 CTFYDQMKENGLKPNAHT 528
F++ MK GLKP+ T
Sbjct: 495 LRFFESMKREGLKPDDAT 512
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 215 TFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNM 274
++ +++ + + EA +L M G + + + ++ + + L++ +L +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 275 LHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRH 334
+ G L+ Y + + +A++LF M AG D+V WN +I +S+ G
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM--AG--KDIVSWNTMIAGYSRHGFG 491
Query: 335 QDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRY-IDPDLVFCNA 391
+ AL F S+ ++ ++PD T+ + LS + + D + + Y + P+
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
++ L +AG DA ++LM + F PD + LL A
Sbjct: 552 MVDLLGRAGLLEDA---HNLMKNMPFEPDAAIWGTLLGA 587
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
GI + I I C+LGILD A ++ M +G +P+VVTYTTLI A + R
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
+ L+N M G P+L +NV I R DA + + K ++PD T +
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 363 ICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPD 420
+R D+ A+ + P+L ++ YL KAG+ A + + P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 421 KYSFAVLLSALCAAGKIYEAVKV 443
+ +LL L G++ +A +
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSI 374
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 156/357 (43%), Gaps = 22/357 (6%)
Query: 94 QAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYH-QMQSYGFVPNTFARNLF 152
+ + L L + +T + ++F LL L R G + H + +G N + +N
Sbjct: 117 EGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNAL 176
Query: 153 MDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPN 212
+ + G + +A VF + + F++++ + N M R P
Sbjct: 177 VKMYSLCGLMDMARGVFDRRCKEDVFSWNL-MISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 213 ANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQ 272
+ T +L+A K+ ++ + + S+ + L++ + G +D+A ++ +
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
+M + +V+++T+++K Y+E + A F+ M D + W ++ID + +AG
Sbjct: 296 SMK----ARDVISWTSIVKGYVERGNLKLARTYFDQM----PVRDRISWTIMIDGYLRAG 347
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP-----DLV 387
++L +FR + + PD +T+ S L+ ++ + YID D+V
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI---GEWIKTYIDKNKIKNDVV 404
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
NAL+ K G A + + M + DK+++ ++ L G+ EA+KV+
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQ----RDKFTWTAMVVGLANNGQGQEAIKVF 457
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 10/242 (4%)
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH--M 309
+ LI + + + D A K+ + M G VV++ L+ A + S+ LF+
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
R TPD + + +LI + +G+ + A+ + R + + ++ T+ L + ++ +
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 370 DLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVL 427
D +V + D D N L K P E + M +G PD S+ L
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYNVRLMNAAKES-PERVKELMEEMSSVGLKPDTVSYNYL 284
Query: 428 LSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ-AVVRK 486
++A C G + EA KVY G ++ +A +I L G Y TVFK+ A+V K
Sbjct: 285 MTAYCVKGMMSEAKKVYEG----LEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK 340
Query: 487 YP 488
P
Sbjct: 341 IP 342
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+ ++ L+ ++ +A +++ M V G++ ++ +T ++ + G++D A L
Sbjct: 172 PDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESL 231
Query: 271 LQNMLHTGCS-PNVVTYTTLIKAYMES-NRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
M++ GC N V L+ A ES RV + L M S G PD V +N L+ +
Sbjct: 232 WIEMVNKGCDLDNTVYNVRLMNAAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAY 288
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD----LLPEPALVFRYIDP 384
G +A V+ L QP+ T + + +C + ++D + + A+V + P
Sbjct: 289 CVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKI--P 342
Query: 385 DLVFCNALLSYLVKAGHPSDA 405
D C L LVK DA
Sbjct: 343 DFKTCKHLTEGLVKNNRMEDA 363
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 106/538 (19%), Positives = 218/538 (40%), Gaps = 57/538 (10%)
Query: 111 PNSFLLL--LRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
PNSF L +L G+ Q + + G N ++ + + GN+ A +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYP-NANTFHSLLNAFFKMD 227
F + + + T++ + + +R++Y + ++F S++ +
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS--MRLNYVRLSESSFASVIKLCANLK 309
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
L QL +V G F N+ T L+ + + + A +L + + GC NVV++T
Sbjct: 310 ELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWT 366
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
+I +++++ +A +LF+ M+ G P+ ++V++ + V + K
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKT 422
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAA 406
N + T+ L + + E A VF I D D+V +A+L+ + G A
Sbjct: 423 NYERSSTVGTALLDAYVK---LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 407 EFYDLMIELGFAPDKYSFAVLLSALCAA-------GKIYEAVKV---------------- 443
+ + + + G P++++F+ +L+ +CAA GK + +
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 444 ---YRGGVMSSQETDARIH-------TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
+G + S++E R +I + G+ + A VFK+ RK +D V
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 494 YAVGICALLRSGRTPDACTFYDQM-KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
+ A +G + ++D M ++ + P + M+ + + L+K ++++ M
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Query: 553 IGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPA-KALHALSSDKYAES 609
R L C +++ LA + + + P A + L S+ YAES
Sbjct: 659 PNPAGSTIWRTILAACRVHKKTEL-----GRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 149/366 (40%), Gaps = 62/366 (16%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
+ ++ SLL F + EA +L + LG++ ++++ ++ L ++L
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL-----CDELF 111
Query: 272 QNMLHTGCSP-----NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
LH C +V T+L+ YM+ + D +F+ M+ ++V W LI
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE----RNVVTWTTLIS 167
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF--DLLPEPALVFRYIDP 384
+++ + + L +F + + QP+ +T + L ++ + + L +V +D
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDL-----------MIELGFAPD------------- 420
+ N+L++ +K G+ A +D MI G+A +
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS-GYAANGLDLEALGMFYSM 286
Query: 421 --------KYSFAVLLSALCAAGKIYEAVK-----VYRGGVMSSQETDARIHTVIIVELI 467
+ SFA ++ LCA K + V + G + D I T ++V
Sbjct: 287 RLNYVRLSESSFASVIK-LCANLKELRFTEQLHCSVVKYGFL----FDQNIRTALMVAYS 341
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
K L A +FK+ + V++ I L++ +A + +MK G++PN
Sbjct: 342 KCTAMLDALRLFKEIGCVG---NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 528 TCNMML 533
T +++L
Sbjct: 399 TYSVIL 404
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 301 DASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
+A ++ M + G D+V ++ +I C+SK G L +F + K+ I+PD + +
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 361 ------SMICQSR-MFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
S + ++R + + E + I+P++V N+L+ L KA +A + +D M+
Sbjct: 345 HALAKASFVSEARNLMKTMEEE----KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAV-KVYRGGVMSSQETDARIHTVIIVELIKAGKY 472
E G P ++ + L +++E + K+ + G + ET + ++I +L + +
Sbjct: 401 EKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVET----YIMLIRKLCRWRDF 456
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
++ + + D +Y V I L +G+ +A +Y +MK+ G++PN + +M+
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
Query: 533 LFTFY-KEKDLQKVNQMLKEM-IGSRIELSDR--NFL 565
F K+ Q++ E+ G+ ++ S+R NFL
Sbjct: 517 QSWFSGKQYAEQRITDSKGEVNKGAIVKKSEREKNFL 553
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 121/594 (20%), Positives = 230/594 (38%), Gaps = 85/594 (14%)
Query: 92 TLQAILLQLESIGCILT-KNPNSFLLLLRILWRAGMHAMFFQAYHQ-----MQSYGF--- 142
TL +L + + C+ T K +SF++ L + + Y + M + F
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 143 -VPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXX 201
V + + N + H ++G + LA+ F+Q+ + T++ ++ N
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN-SMISGFNQRGYDLRALDIF 266
Query: 202 KRMLRMHYY-PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
+MLR P+ T S+L+A ++ L Q+ +V G S V LI + +
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 261 LGILDVANKLLQNMLHTGCSP-NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
G ++ A +L++ G + +T L+ Y++ + A N+F ++ D+V
Sbjct: 327 CGGVETARRLIE---QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD----RDVV 379
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL-----------------SM 362
W +I + + G + +A+ +FRS+ +P+ YTL + L S
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 363 ICQSRMFDLLPEPALVFRYIDP----------DLVFCN-------ALLSYLVKAGHPSDA 405
+ ++ + AL+ Y DL+ C +++ L + GH +A
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 406 AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI----HTV 461
E ++ M+ G PD ++ + SA AG + + + + ++ D I H
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD----MMKDVDKIIPTLSHYA 555
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKEN- 520
+V+L L A Q + K P++ G +LL + R E
Sbjct: 556 CMVDLFGRAGLLQEA----QEFIEKMPIEPDVVTWG--SLLSACRVHKNIDLGKVAAERL 609
Query: 521 -GLKPNAHTCNMMLFTFY----------KEKDLQKVNQMLKEMIGSRIELSDRNF---LN 566
L+P L Y K + K ++ KE S IE+ + +
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 669
Query: 567 LCNFPCRSDAYYSTSNLLAEMREMGLLP--AKALHALSSDKYAESLEEKYEHCA 618
P +++ Y + + E+++MG +P A LH L + + L E A
Sbjct: 670 DGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLA 723
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-- 381
+I+ + + G ++A VF + ++N + + + L+ S+ FDL+ +F+
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEG---IFKELP 168
Query: 382 ----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
I+PD+ N L+ L G ++A D + G PD +F +LL GK
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
E +++ V + + D R + ++ L K ++F + + D +
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRI 557
I + G+ +A T+Y ++++NG +P N +L K DL+ ++ KE+ R+
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 280 SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
P+V +Y TLIK T+A L + + + G PD + +N+L+ G+ ++
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 340 VFRSLSKQNIQPDPYTLTS---WLSMICQSR----MFDLLPEPALVFRYIDPDLVFCNAL 392
++ + ++N++ D + + L+M +S +FD L L PD+ A+
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNEL-----KPDVFTFTAM 288
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
+ V G +A +Y + + G P K+ F LL A+C AG + A ++ +
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY 487
D + ++ L+K K A + + A Y
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDY 383
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 30/323 (9%)
Query: 216 FHSLLNA------FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
+H LLNA F D + + + G + + +IL+ K C+ G LD A
Sbjct: 220 YHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-------THSILVKKFCKQGKLDEAED 272
Query: 270 LLQNMLHT---GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
L+ +L GC + L+ A + +A+ L + ++ G +N+ I
Sbjct: 273 YLRALLPNDPAGCGSGL---GILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIR 329
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-------SRMFDLLPEPALVF 379
KAG + + +S ++ + + SM+ Q ++D+L E ++
Sbjct: 330 ALIKAGFLNNPADFLQKISP--LEGCELEVFRYNSMVFQLLKENNLDGVYDILTE--MMV 385
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
R + P+ NA L + KAG +A E Y E+GFAP S+ L+ LCA + +
Sbjct: 386 RGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQ 445
Query: 440 AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
A V +G + + + + L GK MA + A R +A I
Sbjct: 446 AYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIIS 505
Query: 500 ALLRSGRTPDACTFYDQMKENGL 522
AL G+ DA + ++G+
Sbjct: 506 ALCDVGKVEDALMINELFNKSGV 528
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 168/454 (37%), Gaps = 60/454 (13%)
Query: 219 LLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH-T 277
L++A EA +LL + ++G + I I + G L+ LQ +
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
GC V Y +++ ++ N + ++ M G +P+ N + KAG +A
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 411
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALVFRYIDPDLVFCNALL 393
L ++RS S+ P + + +C + + +D+L ID
Sbjct: 412 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGA------IDRGHFLGGKTF 465
Query: 394 SYLVKA----GHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
S L A G P A E E P + + ++SALC GK+ +A+ +
Sbjct: 466 STLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNK 525
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKY-PLDNVAYAVGIC--------- 499
S +T ++ T +I I + +AA + + + Y P ++ V C
Sbjct: 526 SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK 585
Query: 500 ----ALLR----------------------SGRTPDACTFYDQMKENGLKPNAHTCNMML 533
LL+ +G+ A YD M +G+ P + +ML
Sbjct: 586 NFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILML 645
Query: 534 FTFYKEKDLQKVNQM---LKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREM 590
++ K + + L+E ++ L + LC DA + L EM+
Sbjct: 646 QSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMH----FLEEMKGE 701
Query: 591 GLLPAKALHALSSDKYAESLEEKYEHCAEVNTEL 624
GL P+ + ++ K EEKY+ + E
Sbjct: 702 GLQPSIECYEVNIQKLCN--EEKYDEAVGLVNEF 733
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 14/298 (4%)
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL-- 305
+ +L+ CQ+ D+A+++ Q M + GC P+ +Y L+K + ++ +A++L
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 306 --FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDP-----YTLTS 358
F + G D+V++ +L+D AG DA+ + + ++ ++
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 359 WLSMICQ-SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
W S R+ LL E + R P L +A+ + L + G + E M GF
Sbjct: 272 WESSSEGIERVKRLLTET--LIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ-ETDARIHTVIIVELIKAGKYLMAA 476
P + + + ALC AGK+ EAV V +M ++ V+I L GK + A
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 477 TVFKQAVVRKYPLDN-VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
K+ + + N Y + L R G+ +A ++M P T +MM+
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMI 447
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 14/298 (4%)
Query: 248 VNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNL-- 305
+ +L+ CQ+ D+A+++ Q M + GC P+ +Y L+K + ++ +A++L
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 306 --FNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDP-----YTLTS 358
F + G D+V++ +L+D AG DA+ + + ++ ++
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 359 WLSMICQ-SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGF 417
W S R+ LL E + R P L +A+ + L + G + E M GF
Sbjct: 272 WESSSEGIERVKRLLTET--LIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF 329
Query: 418 APDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ-ETDARIHTVIIVELIKAGKYLMAA 476
P + + + ALC AGK+ EAV V +M ++ V+I L GK + A
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 477 TVFKQAVVRKYPLDN-VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
K+ + + N Y + L R G+ +A ++M P T +MM+
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMI 447
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 164/442 (37%), Gaps = 113/442 (25%)
Query: 134 YHQMQSYGFVPNTF---------ARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITL 184
Y + S GF F A N + + R GN A+ +F+++Q +D T+
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 185 FHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGI 244
L L + E Q+ G ++ LG+
Sbjct: 93 VKL--------------------------------LQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
+ +V++ LI + + G L+++ K+ +M N+ ++ +++ +Y + V DA
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIG 176
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS------ 358
L + M G PD+V WN L+ ++ G +DA+ V + + ++P +++S
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 359 --------------------WLSMICQSRMFDL------LPEPALVFRYID-PDLVFCNA 391
W + ++ + D+ LP +VF +D ++V N+
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
L+S L A DA M + G PD ++ L S GK +A+ V G M
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI--GKMKE 354
Query: 452 QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
+ + V++ ++G +A
Sbjct: 355 KGVAPNV---------------------------------VSWTAIFSGCSKNGNFRNAL 381
Query: 512 TFYDQMKENGLKPNAHTCNMML 533
+ +M+E G+ PNA T + +L
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLL 403
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/556 (18%), Positives = 210/556 (37%), Gaps = 103/556 (18%)
Query: 145 NTFARNLFMDAHFRIGNLHLALTVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXX 200
N + N + ++ ++G + A+ + +++ P+ T++ +L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN-SLLSGYASKGLSKDAIAV 212
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
KRM P+ ++ SLL A + L + G ++ + + V V T LI + +
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 261 LG----------ILDVANKLLQNMLHTGCS---------------------PNVVTYTTL 289
G ++D N + N L +G S P+ +T+ +L
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
Y + A ++ M+ G P++V W + SK G ++AL VF + ++ +
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 350 QPDPYTLTSWL----------------------SMICQS-----------RMFDLLPEPA 376
P+ T+++ L ++IC + + DL
Sbjct: 393 GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE 452
Query: 377 LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
+ + + L N +L G + + +M+E G PD +F +LS +G
Sbjct: 453 IFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGL 512
Query: 437 IYEAVKVY-----RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN 491
+ E K + R G++ + E H +V+L+ YL A F Q + K
Sbjct: 513 VQEGWKYFDLMRSRYGIIPTIE-----HCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATI 567
Query: 492 VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFY----KEKDLQKVNQ 547
+ C + R + Q+ L+P+ MM+ Y + +D++++
Sbjct: 568 WGAFLSSCKIHRDLELAEIAWKRLQV----LEPHNSANYMMMINLYSNLNRWEDVERIRN 623
Query: 548 MLKEMIGSRIELSD-RNFLNL-----------CNFPCRSDAYYSTSNLLAEMREMGLLP- 594
+++ +R+ + D +++ + P D Y+ L++EM++ G +P
Sbjct: 624 LMRN---NRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPD 680
Query: 595 AKALHALSSDKYAESL 610
+H SD E L
Sbjct: 681 TSCIHQDISDSEKEKL 696
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 137/324 (42%), Gaps = 39/324 (12%)
Query: 113 SFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQI 172
+F ++ + G+ + + +M S+G P+ +DA+ R GN+ +AL+++ +
Sbjct: 212 TFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRA 271
Query: 173 QPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEA 232
+ + +T L + Y + + LN + +M A
Sbjct: 272 RTEKWRIDAVTFSTL-------------------IRIYGVSGNYDGCLNIYEEMKA---- 308
Query: 233 YQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKA 292
LG++ ++ ++ LI + A + ++++ G +PN TY L++A
Sbjct: 309 ---------LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSK-QNIQP 351
Y + DA ++ M+ G + ++L+N L+ + +A +F+ + + P
Sbjct: 360 YGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDP 419
Query: 352 DPYTLTSWLSM-ICQSRMFDLLPEPALVFRY---IDPDLVFCNALLSYLVKAGHPSDAAE 407
D +T +S +++ C R+ + E AL+ +P L +++ KA D
Sbjct: 420 DSWTFSSLITVYACSGRVSE--AEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 408 FYDLMIELGFAPDKYSFAVLLSAL 431
+D ++ELG PD LL+ +
Sbjct: 478 TFDQVLELGITPDDRFCGCLLNVM 501
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 11/306 (3%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L+ + KL ML G P+ T+TT+I ++ A F M S G PD V
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD--LLPEPALVFRY 381
+ID + +AG AL ++ + + D T ++ + + S +D L +
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ P+LV N L+ + +A P A Y +I GF P+ ++A L+ A A +A+
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 442 KVYRGGVMSSQETDARIHTVI---IVELIKAGKYLMAATVFKQAV--VRKYPLDNVAYAV 496
+YR +E + ++ ++ + +Y+ A Q + D+ ++
Sbjct: 371 AIYR----EMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSS 426
Query: 497 GICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
I SGR +A QM+E G +P ++ + K K + V + +++
Sbjct: 427 LITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELG 486
Query: 557 IELSDR 562
I DR
Sbjct: 487 ITPDDR 492
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 121/332 (36%), Gaps = 35/332 (10%)
Query: 265 DVANKLLQNMLHT-GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+ A +L N+L T S V+ Y +K + +S + + LF+ M G PD +
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID 383
+I C + G + A+ F +S S C+
Sbjct: 216 IISCARQNGVPKRAVEWFEKMS---------------SFGCE------------------ 242
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
PD V A++ +AG+ A YD + D +F+ L+ +G + +
Sbjct: 243 PDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNI 302
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
Y + + I+ +I + +A + A ++K + + + YA + A R
Sbjct: 303 YEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGR 362
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDR- 562
+ DA Y +MKE GL N +L + + + ++ ++M D
Sbjct: 363 ARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSW 422
Query: 563 NFLNLCNFPCRSDAYYSTSNLLAEMREMGLLP 594
F +L S L +MRE G P
Sbjct: 423 TFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 47/262 (17%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
NA ++ +L+ A+ K L EA + LM + ++ W L+ + G L A KL
Sbjct: 175 NAVSWTALVVAYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLF 230
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
M ++++YT++I Y + + A +LF R D+ W+ LI +++
Sbjct: 231 DEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARGV----DVRAWSALILGYAQN 282
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE---------PALVFRYI 382
G+ +A VF + +N++PD + + +S Q F+L + Y+
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV 342
Query: 383 DPDLVFCNALLSYLVKA-------------------------GHPSDAAEFYDLMIELGF 417
P L+ NA ++ +A G S+A ++ M++ G
Sbjct: 343 VPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 402
Query: 418 APDKYSFAVLLSALCAAGKIYE 439
PD+ +F V+L +C ++ E
Sbjct: 403 VPDEVAFTVILK-VCGQSRLVE 423
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 6/323 (1%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P +++++++ K + AYQLL S + +L+ C+ A +
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
L+ ML + Y ++ + T+ N+ M PD N +I+ K
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 331 AGRHQDALGVFRSL-SKQNIQPDPYTL-TSWLSMICQSRMFDLLPEPALVF--RYIDPDL 386
GR DA+ V + + + PD TL T ++ Q R + L V I P +
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
V NA++ L K +A + + + D ++A+++ LC K+ A K +
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV-AYAVGICALLRSG 505
+ S DA ++ + L ++G YL A F + + NV Y I RSG
Sbjct: 580 VIWPSGRHDAFVYAAFLKGLCQSG-YLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Query: 506 RTPDACTFYDQMKENGLKPNAHT 528
+A ++M++NG P+A T
Sbjct: 639 LKREAYQILEEMRKNGQAPDAVT 661
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 4/325 (1%)
Query: 232 AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIK 291
A +++ +M G++ + +IH C+ G A +LL+ P+ TY L++
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLME 385
Query: 292 AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQP 351
+ + A N+ M ++N+ + + L V S+ + + +P
Sbjct: 386 SLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP 445
Query: 352 DPYTLTSWLSMICQ-SRMFDLLP--EPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEF 408
D YTL + ++ +C+ R+ D + + + ++ PD V N ++ L+ G +A +
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 409 YD-LMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
+ +M E P ++ ++ L K EA+ V+ +S D+ + +II L
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
K MA + + D YA + L +SG DAC F + ++G PN
Sbjct: 566 VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVV 625
Query: 528 TCNMMLFTFYKEKDLQKVNQMLKEM 552
N ++ + ++ Q+L+EM
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEEM 650
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 144/380 (37%), Gaps = 48/380 (12%)
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGIL 264
+ + P+ ++ L+N + +++A++L+ M G V +T LI +C++ L
Sbjct: 154 FKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIREL 213
Query: 265 DVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRV-----------------TDAS---- 303
+VA+K+ M G PN +T + LI +++ V TD S
Sbjct: 214 EVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAA 273
Query: 304 ---NLFNHMRSAGHTPDL----------------VLWNVLIDCHSKAGRHQDALGVFRSL 344
NL + M G+ D+ + +ID + R+ A + +
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 345 SKQNIQPDPYTLTSWLSMICQS----RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAG 400
+ ++P + + + +C+ R + LL E + F + + + L+ L K
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS-EFEFFPSEYTY-KLLMESLCKEL 391
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHT 460
A +LM+ A + + L LC E + V + D
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 461 VIIVELIKAGKYLMAATVFKQAVVRKY-PLDNVAYAVGICALLRSGRTPDACTFYDQ-MK 518
+I L K G+ A V + K+ D V +C LL GR +A ++ M
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMP 511
Query: 519 ENGLKPNAHTCNMMLFTFYK 538
EN +KP N ++ +K
Sbjct: 512 ENKIKPGVVAYNAVIRGLFK 531
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 71/202 (35%), Gaps = 28/202 (13%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
P+ N M G AL V ++ P N + ++ +
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN------------AVIRG 528
Query: 204 MLRMHYYPNA-NTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILI---HKH- 258
+ ++H A + F L A D+ A + GL V + + W +I +H
Sbjct: 529 LFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHD 588
Query: 259 -----------CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFN 307
CQ G L A L ++ +G PNVV Y T+I S +A +
Sbjct: 589 AFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILE 648
Query: 308 HMRSAGHTPDLVLWNVLIDCHS 329
MR G PD V W +L H
Sbjct: 649 EMRKNGQAPDAVTWRILDKLHD 670
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 203/490 (41%), Gaps = 72/490 (14%)
Query: 67 RRRDHQSVTVD-HMVPVLGRLTR---RHKTLQAILLQLESIGCILTKNPNSFLLLLRILW 122
R + +T D +++P++ R R R +A Q+ IG L +N + LL +
Sbjct: 147 RGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG--LKENLHVVNELLTLYP 204
Query: 123 RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDI 182
+AG + + +M V N + N+ + + + A+ +F+ +Q F ++
Sbjct: 205 KAGRMGDAYNLFVEMP----VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEV 260
Query: 183 TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLL----GL 238
T + + K M NA + +L FF + A LEA + G
Sbjct: 261 TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALA-VFFSVCAELEALSIAEKVHGY 319
Query: 239 MVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
++ G + + LIH + + G + A L + + + G + ++ +LI +++++ +
Sbjct: 320 VIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG----IESWNSLITSFVDAGK 375
Query: 299 VTDASNLFNHMRSAGHT----PDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPY 354
+ +A +LF+ + H ++V W +I + GR D+L FR + + +
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 355 TLTSWLSM----------------ICQSRMFD----------------LLPEPALVFRYI 382
T+ LS+ + ++ M + LL E +LVF I
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 383 -DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
D DL+ N+++ G A +D MI GF PD + +LSA AG + +
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 442 KVY-----RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV 496
+++ R G+ QE H IV+L+ +L A+ +V+ P++ +
Sbjct: 556 EIFYSMSKRFGLEPQQE-----HYACIVDLLGRVGFLKEAS----EIVKNMPMEPKVCVL 606
Query: 497 GICALLRSGR 506
G ALL S R
Sbjct: 607 G--ALLNSCR 614
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 31/293 (10%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
N +++ +IK + + A +F M+ PD V W ++ CHS+ G+ +D L F
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF 282
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-----DPDLVFCNALLSYL 396
+ L + S+ + + L V Y+ + L NAL+
Sbjct: 283 HLMRMSGNAVSGEALAVFFSVCAE---LEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
K G DA + + G S+ L+++ AGK+ EA+ ++ + +
Sbjct: 340 GKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNV 395
Query: 457 RIHTVIIVELIKA----GKYLMAATVFKQAVVRKYPLDNVAYA--VGICALLRS---GRT 507
+ + V +IK G+ + F+Q K ++V + ICA L + GR
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGRE 455
Query: 508 PDACTFYDQMKENGLKPNA-----HTCNM-----MLFTFYKEKDLQKVNQMLK 550
M EN L NA C + ++F ++KDL N ++K
Sbjct: 456 IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM+ P+ TF L+A K A Q+ GL+V +G + V L+H + + G
Sbjct: 124 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 183
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM-RSAGHTPDLVLW 321
LD A K+ M NVV++T++I Y + DA +LF M R TP+ V
Sbjct: 184 ELDSARKVFDEMSER----NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
+I +K + V+ + I+ + +++ + M + D+ L Y
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR--LFDEY 297
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+L CNA+ S V+ G +A ++LM++ G PD+ S +LSA+ + ++
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS---MLSAISSCSQL 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/479 (19%), Positives = 176/479 (36%), Gaps = 70/479 (14%)
Query: 94 QAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFM 153
+AILL L + ++ + +F L ++ Q + + G+ + F +N +
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 154 DAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNA 213
+ G L A VF ++ N ++ + + + + PN+
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNS 236
Query: 214 NTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
T +++A K++ L ++ + GI+ + + + L+ + + +DVA +L
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD- 295
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV-------------- 319
G S N+ + Y+ +A +FN M +G PD +
Sbjct: 296 --EYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 320 -LW--------------------NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
LW N LID + K R A +F +S + T+ +
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-------TVVT 405
Query: 359 WLSMICQS----------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE- 407
W S++ F+ +PE ++V N ++S LV+ +A E
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEK---------NIVSWNTIISGLVQGSLFEEAIEV 456
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
F + + G D + + SA G + A +Y + + D R+ T ++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNA 526
+ G A ++F R D A+ I A+ +G A +D M E GLKP+
Sbjct: 517 RCGDPESAMSIFNSLTNR----DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 31/296 (10%)
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+L N+LH SP V+ TT K +L N + TP + L +C +
Sbjct: 3 MLGNVLHL--SPMVLATTTTTKP-----------SLLNQSKCTKATP-----SSLKNCKT 44
Query: 330 KAGRHQDALGVF-RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP--DL 386
D L +F RSL+KQ + D T+T ++ C+ + L VF +
Sbjct: 45 I-----DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
N+L+ +G ++A + M+ G +PDKY+F LSA + ++++
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
V D + ++ + G+ A VF + R V++ IC R
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDF 215
Query: 507 TPDACT-FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
DA F+ +++ + PN+ T ++ K +DL+ ++ + S IE++D
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+ ++++ C LG + A + ++++ + C P+VV+Y T+I A + ++ A L+
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
M PD+ + N +ID R +AL VFR +S++ P+ T S L +C+
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 367 R----MFDLLPEPAL----------VFRYI--------DPDLVF-------C-------N 390
R +++L+ E L F Y+ D D+V C N
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYN 425
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
+ V+ E + M G PD+ ++ + + L GKI EA+ ++
Sbjct: 426 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 19/277 (6%)
Query: 309 MRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRM 368
++ + H +L+N ++D K R ++ VF +SK++ + T L+ +
Sbjct: 134 VKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHK 193
Query: 369 FDLLPEPALVFRY-----IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI---ELGFAPD 420
D E VF ID DLV + LL +L + H EF + + F D
Sbjct: 194 VD---EAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKH----VEFAETLFCSRRREFGCD 246
Query: 421 KYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFK 480
+ ++L+ C G ++EA + ++ + S D + +I L K GK A +++
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 481 QAV-VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKE 539
R+ P + V I AL R P+A + ++ E G PN T N +L K
Sbjct: 307 AMWDTRRNPDVKICNNV-IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 540 KDLQKVNQMLKEM--IGSRIELSDRNFLNLCNFPCRS 574
+ +KV ++++EM G +D F L + RS
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRS 402
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 135/323 (41%), Gaps = 14/323 (4%)
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
Y ++ + R + +F+ M + + VL++ ++ A + +A+GVF
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 346 KQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF----RYIDPDLVFCNALLSYLVKAGH 401
+ I D L +C+ + + +F R D+ N +L+ G+
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEF---AETLFCSRRREFGCDIKAMNMILNGWCVLGN 262
Query: 402 PSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTV 461
+A F+ +I PD S+ +++AL GK+ +A+++YR + + D +I
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 462 IIVELIKAGKYLMAATVFKQAVVRKYPLDN-VAYAVGICALLRSGRTPDACTFYDQMKEN 520
+I L + A VF++ + K P N V Y + L + RT ++M+
Sbjct: 323 VIDALCFKKRIPEALEVFRE-ISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 521 G--LKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYY 578
G PN T + +L + KD V+ +L+ M ++ E++ + + + D
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSKD---VDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEE 438
Query: 579 STSNLLAEMREMGLLPAKALHAL 601
+ +EM GL P + + +
Sbjct: 439 KVREIWSEMERSGLGPDQRTYTI 461
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
RM+ P+ TF L+A K A Q+ GL+V +G + V L+H + + G
Sbjct: 124 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 183
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM-RSAGHTPDLVLW 321
LD A K+ M NVV++T++I Y + DA +LF M R TP+ V
Sbjct: 184 ELDSARKVFDEMSER----NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
+I +K + V+ + I+ + +++ + M + D+ L Y
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR--LFDEY 297
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+L CNA+ S V+ G +A ++LM++ G PD+ S +LSA+ + ++
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS---MLSAISSCSQL 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/479 (19%), Positives = 176/479 (36%), Gaps = 70/479 (14%)
Query: 94 QAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFM 153
+AILL L + ++ + +F L ++ Q + + G+ + F +N +
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 154 DAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNA 213
+ G L A VF ++ N ++ + + + + PN+
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNS 236
Query: 214 NTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
T +++A K++ L ++ + GI+ + + + L+ + + +DVA +L
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD- 295
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV-------------- 319
G S N+ + Y+ +A +FN M +G PD +
Sbjct: 296 --EYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 320 -LW--------------------NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
LW N LID + K R A +F +S + T+ +
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-------TVVT 405
Query: 359 WLSMICQS----------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE- 407
W S++ F+ +PE ++V N ++S LV+ +A E
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEK---------NIVSWNTIISGLVQGSLFEEAIEV 456
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
F + + G D + + SA G + A +Y + + D R+ T ++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNA 526
+ G A ++F R D A+ I A+ +G A +D M E GLKP+
Sbjct: 517 RCGDPESAMSIFNSLTNR----DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 31/296 (10%)
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
+L N+LH SP V+ TT K +L N + TP + L +C
Sbjct: 3 MLGNVLHL--SPMVLATTTTTKP-----------SLLNQSKCTKATP-----SSLKNC-- 42
Query: 330 KAGRHQDALGVF-RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP--DL 386
+ D L +F RSL+KQ + D T+T ++ C+ + L VF +
Sbjct: 43 ---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG 446
N+L+ +G ++A + M+ G +PDKY+F LSA + ++++
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 447 GVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGR 506
V D + ++ + G+ A VF + R V++ IC R
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDF 215
Query: 507 TPDACT-FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD 561
DA F+ +++ + PN+ T ++ K +DL+ ++ + S IE++D
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 142/338 (42%), Gaps = 17/338 (5%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVF 169
N ++ L+ +L + + + +M + G V N + A+ R G A T+
Sbjct: 149 NVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLL 208
Query: 170 QQIQP-----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFF 224
++++ P+ T+ I + M R PN T+++L++A+
Sbjct: 209 ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD-MRRQGIRPNTITYNTLIDAYG 267
Query: 225 KMDALLEAYQLLGLMVVLGIQFSVNVWTI--LIHKHCQLGILDVANKLLQNMLHTGCSPN 282
K +E L + ++ + WT+ + G +++ + +G PN
Sbjct: 268 KAKMFVEMESTL-IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
+ T+ L+ +Y +S S + +M+ ++ +V +NV+ID +AG + +FR
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFR 386
Query: 343 SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP-----DLVFCNALLSYLV 397
+ + I P TL S + ++ D + V R+I+ DLVF N L+
Sbjct: 387 LMQSERIFPSCVTLCSLVRAYGRASKADKI---GGVLRFIENSDIRLDLVFFNCLVDAYG 443
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+ ++ +LM + GF PDK ++ ++ A +G
Sbjct: 444 RMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 17/331 (5%)
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
PNV Y LI + + A LF M + G + ++ L+ +S++GR A +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 341 F-RSLSKQNIQPDPYT----LTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSY 395
R S N QPD +T + S+L + ++ DLL + + + I P+ + N L+
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD--MRRQGIRPNTITYNTLIDA 265
Query: 396 LVKAGHPSD-AAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
KA + + ++ E PD ++ L A G+I Y S E
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
+ R +++ K+G Y + V + Y V Y V I A R+G +
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 515 DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRS 574
M+ + P+ T ++ + + K+ +L+ + S I L+L F C
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR------LDLVFFNCLV 439
Query: 575 DAYYSTSNLLAEMREMGLLPAKALHALSSDK 605
DAY AEM+ G+L DK
Sbjct: 440 DAYGRMEK-FAEMK--GVLELMEKKGFKPDK 467
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 164/392 (41%), Gaps = 67/392 (17%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLG 262
ML P+ +T ++L +L ++ G + GI +++ + L++ + + G
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
L +A ++ + + V+ ++LI Y + + D LF M +G T D +
Sbjct: 601 SLKLARQVYDRLPEL----DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
++ + + V ++K + +P +S L+M + F + + F I
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSK---FGSIDDCCKAFSQI 713
Query: 383 D-PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
+ PDL+ AL++ + G ++A + Y+LM E GF PDK +F +LSA C+ G + E
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA-CSHGGLVE-- 770
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL--DNVAYAVGIC 499
++ H ++V+ Y + +N Y +
Sbjct: 771 -------------ESYFHL--------------------NSMVKDYGIEPENRHYVCMVD 797
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFT--FYKEKDLQKVNQMLKEMIGSRI 557
AL RSGR +A +F + M +KP+A +L + E +L KV I
Sbjct: 798 ALGRSGRLREAESFINNMH---IKPDALVWGTLLAACKIHGEVELGKVAAK------KAI 848
Query: 558 ELSDRNFLNLCNFPCRSDAYYSTSNLLAEMRE 589
EL P + AY S SN+LAE+ E
Sbjct: 849 ELE----------PSDAGAYISLSNILAEVGE 870
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 166/415 (40%), Gaps = 44/415 (10%)
Query: 126 MHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQ---IQPPNFFTFDI 182
+HA F++ GF ++ + + + G++ L+ VF+ IQ N I
Sbjct: 373 VHAWVFKS-------GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMI 425
Query: 183 TLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVL 242
T F S RML+ + + SLL+ +D L Q+ G +
Sbjct: 426 TSFSQSKKPGKAIRLFT---RMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKS 479
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G+ + V + L + + G L+ + KL Q + + + ++I + E + +A
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWASMISGFNEYGYLREA 535
Query: 303 SNLFNHMRSAGHTPD-LVLWNVLIDC--HSKAGRHQDA------LGVFRSLSKQNIQPDP 353
LF+ M G +PD L VL C H R ++ G+ + + + +
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 354 YTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMI 413
Y+ L + Q ++D LPE +DP V C++L+S + G D + M+
Sbjct: 596 YSKCGSLKLARQ--VYDRLPE-------LDP--VSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 414 ELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYL 473
GF D ++ + +L A + + +V+ T+ + + ++ K G
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 474 MAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
F Q P D +A+ I + + G+ +A Y+ MKE G KP+ T
Sbjct: 705 DCCKAFSQI---NGP-DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVT 755
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 23/323 (7%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P++ T+ S+L A ++ L + ++ G + V V T ++ + + G + A ++
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
+ + P+VV++T ++ Y +SN A +F MR +G + +I +
Sbjct: 308 FSRIPN----PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 331 AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLV--- 387
+A V + K D + +SM +S DL + VF +D D+
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ---VFEDLD-DIQRQN 419
Query: 388 FCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL-C-AAGKIYEAVKVYR 445
N +++ ++ P A + M++ G D++S LLS L C GK +
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS 479
Query: 446 GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
G V+ D + + + K G + +F Q + K DN +A I G
Sbjct: 480 GLVL-----DLTVGSSLFTLYSKCGSLEESYKLF-QGIPFK---DNACWASMISGFNEYG 530
Query: 506 RTPDACTFYDQMKENGLKPNAHT 528
+A + +M ++G P+ T
Sbjct: 531 YLREAIGLFSEMLDDGTSPDEST 553
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 193/491 (39%), Gaps = 91/491 (18%)
Query: 110 NPNSFLLLLRILWRAGMHAMFFQAYH-QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
+ + F LL ++ + A++ + H + GF F +N +DA+ + G+L V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 169 FQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDA 228
F ++ N +T++ + L+ + R + T++S+++ F + D
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEA-----DSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 229 LLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP---NVVT 285
EA +M G F +N ++ G+ D+ NK +Q SP +V
Sbjct: 133 CEEALCYFAMMHKEG--FVLNEYSFASVLSACSGLNDM-NKGVQVHSLIAKSPFLSDVYI 189
Query: 286 YTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLS 345
+ L+ Y + V DA +F+ M ++V WN LI C + G +AL VF+ +
Sbjct: 190 GSALVDMYSKCGNVNDAQRVFDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 346 KQNIQPDPYTLTSWL------------------------------------------SMI 363
+ ++PD TL S + S I
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 364 CQSR-MFDLLP------EPALVFRYI----------------DPDLVFCNALLSYLVKAG 400
++R +FD +P E +++ Y + ++V NAL++ + G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA----VKVYRGG--VMSSQET 454
+A + L+ P YSFA +L A +++ V V + G S +E
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
D + +I +K G VF++ + R D V++ I ++G +A +
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----DCVSWNAMIIGFAQNGYGNEALELF 481
Query: 515 DQMKENGLKPN 525
+M E+G KP+
Sbjct: 482 REMLESGEKPD 492
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDL 371
+G + ++ + N LID +SK G +D VF + ++NI YT W S++
Sbjct: 49 SGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNI----YT---WNSVVTGLTKLGF 101
Query: 372 LPEPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L E +FR + + D N+++S + +A ++ +M + GF ++YSFA +LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
+ + V+V+ S +D I + ++ K G A VF + R
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV--- 218
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
V++ I ++G +A + M E+ ++P+ T
Sbjct: 219 -VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M R P A +F +++ F+K + E +++ +M G+ V + I+I C+
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
A L+ ++ PN VTY+ LI + + +A NLF M G+ PD +
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL 360
LI C K G + AL + R ++N P +++ WL
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPS-FSVMKWL 363
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 184/499 (36%), Gaps = 78/499 (15%)
Query: 135 HQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXX 194
H +QS F + N ++ + + G+L A VF+++ +F T+ TL +
Sbjct: 85 HILQSI-FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW-TTLISGYSQHDRP 142
Query: 195 XXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV---- 250
+MLR Y PN T S++ A +QL G V G +V+V
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL 202
Query: 251 ---------------------------WTILIHKHCQLGILDVANKLLQNMLHTGCSPNV 283
W LI H + + A +L Q ML G P+
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 284 VTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRS 343
+Y +L A + + + +M +G N L+D ++K+G DA +F
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 344 LSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY-----IDPDLVFCNALLSYLVK 398
L+K+++ SW S++ E F I P+ + ++L+
Sbjct: 323 LAKRDV-------VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375
Query: 399 AGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI 458
+G + +Y+LM + G P+ + + ++ L AG + A++ M + T A
Sbjct: 376 SGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE--EMPIEPTAAIW 433
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
++ + L A + V P D + + GR DA +MK
Sbjct: 434 KALLNACRMHKNTELGAYAA--EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 491
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN---FPCRSD 575
E+G+K KE S +E+ + + + N P R +
Sbjct: 492 ESGVK--------------------------KEPACSWVEIENAIHMFVANDERHPQREE 525
Query: 576 AYYSTSNLLAEMREMGLLP 594
+LA+++E+G +P
Sbjct: 526 IARKWEEVLAKIKELGYVP 544
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 41/228 (17%)
Query: 243 GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDA 302
G++ ++ + L+ + G + A ++ N+ +V++TT+I Y + +
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYARCGLLDVS 342
Query: 303 SNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSM 362
LF+ M D+VLWN +I +A R QDAL +F+ + N +PD T+ LS
Sbjct: 343 RKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 363 ICQSRMFDL--------------------------------LPEPALVFRYIDP-DLVFC 389
Q D+ + E VF I + +
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
A++ L G S A +++ MI+ G APD+ +F LLSA C G I
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 180/464 (38%), Gaps = 66/464 (14%)
Query: 112 NSFLL---LLRILWRAGMHAMFFQAYHQMQSYGFVPNTFA--RNLFMDAHFRIGNLHLAL 166
+SF+L LL +L + + Q QM G + + FA R + A L ++
Sbjct: 48 HSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSV 107
Query: 167 TVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKM 226
+ + I+ PN F++++T+ S K+MLR H + H FK+
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLY-KQMLR-HGCCESRPDHFTYPVLFKV 165
Query: 227 DALLE----AYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSP- 281
A L + +LG ++ L ++ +V IH G ++ A K+ SP
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE------SPV 219
Query: 282 -NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV--------------------- 319
++V++ LI Y + A ++ M S G PD V
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 320 --------------LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
L N L+D SK G +A +F +L K+ T+ SW +MI
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR-------TIVSWTTMISG 332
Query: 366 SRMFDLLPEPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
LL +F + + D+V NA++ V+A DA + M PD+ +
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVV 484
LSA G + + ++R S + + T ++ K G A +VF
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 485 RKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
R +++ Y I L G A +++++M + G+ P+ T
Sbjct: 453 R----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 154/364 (42%), Gaps = 28/364 (7%)
Query: 247 SVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLF 306
+V W++++ + ++ A K +++ N ++ ++ Y V +A +F
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPE----KNAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 307 NHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS 366
+ DLV+WN LI +++ G DA+ F ++ + +PD T++S LS QS
Sbjct: 232 YRV----FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Query: 367 RMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
D+ E + R I+ + NAL+ K G +A ++ + A
Sbjct: 288 GRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA----CC 343
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKA---GKYLMAA-TVFK 480
++S L GK EA++++ + + D + + + ++ A G +LM +F
Sbjct: 344 NSMISCLAIHGKGKEALEMFS----TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFS 399
Query: 481 QAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEK 540
+ + + + I L RSG+ +A Y +KE +KPN +L
Sbjct: 400 EMKTQDVKPNVKHFGCLIHLLGRSGKLKEA---YRLVKEMHVKPNDTVLGALLGACKVHM 456
Query: 541 DLQKVNQMLK--EMIGSRIELSDRNFL-NLCNFPCRSDAYYSTSNLLAEMREMGLLPAKA 597
D + Q++K E GS N L ++ N ++ + + L EM + GL +
Sbjct: 457 DTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPG 516
Query: 598 LHAL 601
L +L
Sbjct: 517 LSSL 520
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 149/370 (40%), Gaps = 19/370 (5%)
Query: 218 SLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT 277
SL++ + K ++ A ++ M + +V W +I + G +A+ L + +
Sbjct: 86 SLISMYGKCGCVVSARKVFDEMP----ERNVATWNAMIGGYMSNGDAVLASGLFEEI--- 138
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
N VT+ +IK Y + + A LF M ++ W+V++ + + +DA
Sbjct: 139 SVCRNTVTWIEMIKGYGKRIEIEKARELFERM--PFELKNVKAWSVMLGVYVNNRKMEDA 196
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLV 397
F + P+ L M R+ D+ A+ +R DLV N L++
Sbjct: 197 RKFFEDI------PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA 250
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
+ G+ DA + + M G+ PD + + +LSA +G++ +V+ E +
Sbjct: 251 QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQF 310
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQM 517
+ +I K G A +VF+ VR N I L G+ +A + M
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSM----ISCLAIHGKGKEALEMFSTM 366
Query: 518 KENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAY 577
+ LKP+ T +L L + ++ EM ++ + ++F L + RS
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
Query: 578 YSTSNLLAEM 587
L+ EM
Sbjct: 427 KEAYRLVKEM 436
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFS---VNVWTILIHKHCQLGILD 265
+ P++ + +L+ + K + + ++L M + S +T ++ G++D
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM-RSAGHTPDLVLWNVL 324
A ++L M G N +TY L+K Y + ++ A +L M AG PD+V +N++
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 325 IDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP 384
ID AL F + + I P + T+ + + F + +P L R D
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM------KAFAMSGQPKLANRVFDE 583
Query: 385 ---------DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
DL+ N L+ + G DA M E GF P+ ++ L + + A
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Query: 436 KIYEAVKVYR 445
K +A+ +++
Sbjct: 644 KPGDALLLWK 653
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 151/387 (39%), Gaps = 77/387 (19%)
Query: 132 QAYHQMQSYGFVPNTFARN---LFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLS 188
QA+ M G +TF+ + F + + A ++ +I PN FT + + +
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 189 NXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSV 248
N + ML +P+ +F +L A E Q+ GL + G+ V
Sbjct: 117 NSSTPEVALTVF-REMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 249 NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
V L++ + + G ++A K+L M + V++ +L+ AY+E V +A LF+
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRM----PVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 309 MRS----------AGHTP-----------------DLVLWNVLIDCHSKAGRHQDALGVF 341
M +G+ D+V WN ++ ++ G + + L VF
Sbjct: 232 MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 342 -RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP---------------- 384
+ L +PD +TL S LS C S L + V YID
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSA-CAS--LGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 385 --------------------DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSF 424
D+ N+++S L G DA E + M+ GF P+ +F
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Query: 425 AVLLSALCAAGKIYEAVKVYRGGVMSS 451
+LSA G + +A K++ +MSS
Sbjct: 409 IGVLSACNHVGMLDQARKLFE--MMSS 433
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 13/244 (5%)
Query: 211 PNANTFHSLLNAFF----KMDALLEAYQLLGLMV-VLGIQFSVNVWTILIHKHCQLGILD 265
P+A+ +++L+ A K AL + L M + Q +V + IL+ Q G +D
Sbjct: 166 PDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVD 225
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
N L +++ + SP+V T+ ++ AY ++ + + + MRS PD++ +NVLI
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-- 383
D + K + F+SL + +P T S + ++RM D + VF+ ++
Sbjct: 286 DSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID---KAEWVFKKMNDM 342
Query: 384 ---PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
P + ++ G S A E ++ + E + +L C G EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 441 VKVY 444
K++
Sbjct: 403 DKLF 406
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 177/447 (39%), Gaps = 51/447 (11%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
P+++ S+L A KM+ +++ + + G+ V V T L+ + +LG +++A K
Sbjct: 102 PSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKA 161
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSK 330
++ N V++ +L+ Y+ES + +A +F+ + D V WN++I ++K
Sbjct: 162 FDDI----AEKNTVSWNSLLHGYLESGELDEARRVFDKIPE----KDAVSWNLIISSYAK 213
Query: 331 AGRHQDALGVF-----RSLSKQNIQPDPYT-------------------LTSWLSMICQS 366
G +A +F +S + NI Y SW++MI
Sbjct: 214 KGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGY 273
Query: 367 RMFDLLPEPALVFRYIDP-DLVFCNALLSYLVKAGHPSDAAEFYDLMIELG--FAPDKYS 423
+ +FR + D + +A+++ + G P DA + + M+E PD+ +
Sbjct: 274 TKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEIT 333
Query: 424 FAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAV 483
+ ++SA G V + D + T +I +K G + A +F
Sbjct: 334 LSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN 393
Query: 484 VRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQ 543
+ D V+Y+ I +G +A + + M E + PN T +L + +Q
Sbjct: 394 KK----DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 544 KVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREM-------GLLPAK 596
+ + M +E S ++ + + R+ L+ M LL A
Sbjct: 450 EGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLAS 509
Query: 597 ALHALSSDKYAESLEEKYEHCAEVNTE 623
LH E E HC ++ T+
Sbjct: 510 GLH-----NNVEFGEIACSHCVKLETD 531
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 3/270 (1%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSA- 312
+I + + G+ + A K+ + M + C +V+++ L+ AY S + LFN +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 313 GHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLL 372
PD+V +N LI + +A+ + + + ++PD T + L F+L
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 373 PE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
E +V + + D+ NA L L + + + G PD +SF ++
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
GK+ EA Y+ V D +++ + KAG + A +FK+ ++Y +
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQMKEN 520
+ L++ + +A K N
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVKIAKTN 384
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 76/165 (46%)
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
++ P+ ++++L+ A + D+L EA LL + G++ + + L+ G +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
+ ++ M+ + ++ TY + + + NLF ++++G PD+ +N +I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G+ +A ++ + K +PD T L +C++ F+
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFE 337
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 7/238 (2%)
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE-----PALV 378
+I + KAG ++A VF + ++ + + + LS S+ FD++ E P +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
I PD+V N L+ L + +A D + G PD +F LL + G+
Sbjct: 175 --SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
+++ V + D R + ++ L K +F + D ++ I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
+ G+ +A +Y ++ ++G +P+ T ++L K D + ++ KE R
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 184/456 (40%), Gaps = 53/456 (11%)
Query: 147 FARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRML- 205
F + + + R+G+ A +F ++ + +++ + S + M+
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 206 RMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILD 265
+ + PN TF S+++A + E + GL++ G+ V V I+ + + G L
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
+ KL +++ N+V++ T+I ++++ FN R GH PD + ++
Sbjct: 187 SSCKLFEDL----SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-DP 384
G + A G+ + + T+ L + + L + + VF I P
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSK---LGRLEDSSTVFHEITSP 299
Query: 385 DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
D + A+L+ G DA + ++LM+ G +PD +F LL+A +G
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG--------- 350
Query: 445 RGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA--YAVGICALL 502
L++ GK+ + + + ++Y +D Y+ + L
Sbjct: 351 ---------------------LVEEGKH------YFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 503 RSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSD- 561
RSG DA Y +KE ++P++ +L KD Q + + + +E D
Sbjct: 384 RSGLLQDA---YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLF--ELEPRDG 438
Query: 562 RNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKA 597
RN++ L N S + S + M++ GL+ A
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASG 474
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 56/299 (18%)
Query: 140 YGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFD-ITLFHLSNXXXXXXXXX 198
+G + N F++ + + G+L + +F+ + N +++ + + HL N
Sbjct: 163 FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAY 222
Query: 199 XXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKH 258
R R+ + P+ TF ++L +
Sbjct: 223 FNMSR--RVGHEPDQATFLAVLRS------------------------------------ 244
Query: 259 CQ-LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPD 317
C+ +G++ +A + ++ G S N T L+ Y + R+ D+S +F+ + S PD
Sbjct: 245 CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS----PD 300
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL 377
+ W ++ ++ G +DA+ F + I PD T T L+ S L+ E
Sbjct: 301 SMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS---GLVEEGKH 357
Query: 378 VF-----RY-IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
F RY IDP L + ++ L ++G DA Y L+ E+ P + LL A
Sbjct: 358 YFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA---YGLIKEMPMEPSSGVWGALLGA 413
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 13/244 (5%)
Query: 211 PNANTFHSLLNAFF----KMDALLEAYQLLGLMV-VLGIQFSVNVWTILIHKHCQLGILD 265
P+A+ +++L+ A K AL + L M + Q +V + IL+ Q G +D
Sbjct: 166 PDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVD 225
Query: 266 VANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
N L +++ + SP+V T+ ++ AY ++ + + + MRS PD++ +NVLI
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID-- 383
D + K + F+SL + +P T S + ++RM D + VF+ ++
Sbjct: 286 DSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID---KAEWVFKKMNDM 342
Query: 384 ---PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEA 440
P + ++ G S A E ++ + E + +L C G EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 441 VKVY 444
K++
Sbjct: 403 DKLF 406
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/537 (20%), Positives = 210/537 (39%), Gaps = 70/537 (13%)
Query: 111 PNSFLLLLRILWRAGMHAMFFQAYHQMQSY--GFVP-NTFARNLFMDAHFRIGNLHLALT 167
P+ +L++ A + A FF + + Y F N FA L + HFR + L
Sbjct: 125 PSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAAD-QLPEL 183
Query: 168 VFQQIQPPNFFTFDITL-FHLSNXXXXXXXXXXXXKRMLRMHY-YPNANTFHSLLNAFFK 225
+ Q +PP+ F+I + H N +R LR++Y Y F F
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADN------------RRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 226 ---MDALLE-AYQLLGLMVVL-----GIQFSVNVWTILIHKHCQLGILDVANKLLQNMLH 276
MDAL++ Y L L V G+ + IL+ C+ G ++ ++LQ M
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 277 TGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQD 336
C P+V YT +IK + + + +++ MR PD++ + L+ K GR +
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 337 ALGVFRSLSKQNIQPDP---YTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALL 393
+F + + I D L + R L E + YI D+ NA++
Sbjct: 352 GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI-ADIGIYNAVI 410
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY-RGGVM--- 449
L A + + + IE PD + + ++ A ++ + V R G +
Sbjct: 411 KGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYP 470
Query: 450 -------------SSQETDA-----------------RIHTVIIVELIKAGKYLMAATVF 479
+ +E +A ++ +++ L K G + ++F
Sbjct: 471 VSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 480 KQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKE 539
+ + D+ +Y++ IC + G AC+F++++ E P+ + +
Sbjct: 531 YEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Query: 540 KDLQKVNQMLKEMIGSRIELSDRNF---LNLCNFPCRSDAYYSTSNLLAEMREMGLL 593
++ V +++E +G+ +E F L +C+ C+ ++ EM + G+
Sbjct: 591 GEIDAVMLLVRECLGN-VESGPMEFKYALTVCHV-CKGSNAEKVMKVVDEMNQEGVF 645
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 133/341 (39%), Gaps = 16/341 (4%)
Query: 107 LTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLAL 166
L + +F++L++ L +AG + +M+ P+ FA + GNL +L
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASL 318
Query: 167 TVFQQIQ----PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
V+ +++ P+ + + L + M + + L+
Sbjct: 319 RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFME-MKGKQILIDREIYRVLIEG 377
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
F + A L +V G + ++ +I C + +D A KL Q + P+
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPD 437
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
T + ++ AY+ NR++D SN+ + G+ L + ++ AL VF
Sbjct: 438 FETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFY 497
Query: 343 SLSKQNIQPDPYTLTSWLSMICQS--RMFDLLPEPALVFRY----IDPDLVFCNALLSYL 396
L + + S +++ ++ +M D+ +L + +PD + +
Sbjct: 498 ILKTKG-----HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
V+ G A F++ +IE+ P ++ L LC G+I
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI 593
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M R PN+++F +++ F+ D E ++L +M G+ V+ + I I C+
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
A LL ML G PN VTY+ LI + + +A LF M + G PD +
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQP 351
LI K G + AL + + ++N P
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVP 360
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 122/325 (37%), Gaps = 37/325 (11%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
++ +R+ P N F+ LL+A K + E LL M ++ N + +L C++
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRV 281
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT---PDL 318
A KLL+ M+ G P TY I + ++ V +A++LF+ M + G P
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTA 341
Query: 319 VLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALV 378
+ ++I +K + ++ + + PD T + +C + D
Sbjct: 342 KTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVD-------- 393
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+A +F D M G+ PD ++ L LC K
Sbjct: 394 -------------------------EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTD 428
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
EA+K+Y V S + + ++I + A + + R D Y I
Sbjct: 429 EALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMI 488
Query: 499 CALLRSGRTPDACTFYDQMKENGLK 523
L R +AC +++ GLK
Sbjct: 489 NGLFDCHRAKEACFLLEEVVNKGLK 513
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 10/233 (4%)
Query: 316 PDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLT----SWLSMICQSRMFDL 371
P++ +N+L+D K G ++ + R + + ++PD T W + + L
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 372 LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA---PDKYSFAVLL 428
L E + + + +C A+ ++ +AG +AA+ +D MI G A P +FA+++
Sbjct: 291 LEE-MIEAGHKPENFTYCAAIDTF-CQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 429 SALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
AL K E ++ + + D + +I + A K A + + YP
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKD 541
D V Y + L + +T +A Y +M E+ P+ T NM++ F++ D
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 132/320 (41%), Gaps = 20/320 (6%)
Query: 57 ALSCFFWSS-QRRRDHQSVTVDHMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFL 115
A F W+ Q H+ + + M+ +L ++K + ++ L+ + +N + +
Sbjct: 142 AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLD----YMKRNNKTVV 197
Query: 116 L---LLRILW----RAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTV 168
L LL IL R H F +++ P A N+ +DA + G + +
Sbjct: 198 LVDVLLEILRKYCERYLTHVQKFAKRKRIR-VKTQPEINAFNMLLDALCKCGLVKEGEAL 256
Query: 169 FQQIQ---PPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFK 225
++++ P+ TF++ F + M+ + P T+ + ++ F +
Sbjct: 257 LRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLL-EEMIEAGHKPENFTYCAAIDTFCQ 315
Query: 226 MDALLEAYQLLGLMVVLGIQFSV---NVWTILIHKHCQLGILDVANKLLQNMLHTGCSPN 282
+ EA L M+ G S + ++I + + +L+ M+ TGC P+
Sbjct: 316 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 283 VVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFR 342
V TY +I+ + +V +A + M + G+ PD+V +N + + + +AL ++
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 343 SLSKQNIQPDPYTLTSWLSM 362
+ + P T +SM
Sbjct: 436 RMVESRCAPSVQTYNMLISM 455
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 53/372 (14%)
Query: 154 DAHFRIGNLHLALTVFQQIQPPNFFTFDITL--FHLSNXXXXXXXXXXXXKRMLRMHYYP 211
D H R +L A +F Q+ N F+++ + F S+ + M P
Sbjct: 69 DLHHR--DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N TF S+L A K + E Q+ GL + G V + L+ + G + A L
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 272 -QNMLHTGC---------SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
+N++ +V + +I YM A LF+ MR +V W
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS----VVSW 242
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS---------------WLSM---- 362
N +I +S G +DA+ VFR + K +I+P+ TL S WL +
Sbjct: 243 NTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED 302
Query: 363 -------ICQSRMFDLLPEPALVFRYI-------DPDLVFCNALLSYLVKAGHPSDAAEF 408
+ S + D+ + ++ + I +++ +A+++ G DA +
Sbjct: 303 SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 409 YDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI-HTVIIVELI 467
+ M + G P ++ LL+A C+ G + E + Y ++S + RI H +V+L+
Sbjct: 363 FCKMRQAGVRPSDVAYINLLTA-CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Query: 468 KAGKYLMAATVF 479
L A F
Sbjct: 422 GRSGLLDEAEEF 433
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 159/362 (43%), Gaps = 36/362 (9%)
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+W L+ + + G+ A +L M G PNV+T+ +I + + + +V +A ++F M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
+S+G P+L+ W +++ + G ++A+ R + + ++P+ +++T LS
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 370 DLLPEPALVFRYIDPDLVFCN------ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYS 423
+ + YI +L + +L+ K G + A + F YS
Sbjct: 563 HI---GRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV--------FGSKLYS 611
Query: 424 FAVLLSALCAA----GKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVF 479
L +A+ +A G + EA+ +YR + D T ++ AG A +F
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 480 KQAVVRKYPLDNVA-YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYK 538
V ++ + Y + + L +G T A ++M KP+A ++ + K
Sbjct: 672 TDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCNK 728
Query: 539 EKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYY--STSNLLAEMREMGLLPAK 596
++ + V+ + ++++ S E N N+ S+AY + + + +MREM + AK
Sbjct: 729 QRKTELVDYLSRKLLESEPE-------NSGNYVTISNAYAVEGSWDEVVKMREM--MKAK 779
Query: 597 AL 598
L
Sbjct: 780 GL 781
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/396 (18%), Positives = 161/396 (40%), Gaps = 48/396 (12%)
Query: 141 GFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFD-ITLFHLSNXXXXXXXXXX 199
G F + D + + G L A VF +I N ++ + + ++ N
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLF 262
Query: 200 XXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHC 259
R + P T + L+A M + E Q + +V G++ + T L++ +C
Sbjct: 263 SDMR--KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
++G+++ A + M D+V
Sbjct: 321 KVGLIEYAEMVFDRMFE---------------------------------------KDVV 341
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPA--L 377
WN++I + + G +DA+ + + + + ++ D TL + +S ++ L E
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 378 VFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKI 437
+ + D+V + ++ K G DA + +D +E D + LL+A +G
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE----KDLILWNTLLAAYAESGLS 457
Query: 438 YEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVG 497
EA++++ G + + +II+ L++ G+ A +F Q + +++
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 498 ICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
+ ++++G + +A F +M+E+GL+PNA + + L
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 11/278 (3%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
++V +T++ Y + + DA +F+ DL+LWN L+ ++++G +AL +F
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVE----KDLILWNTLLAAYAESGLSGEALRLF 464
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVFCNALLSYLVKA 399
+ + + P+ T + + ++ D + L + I P+L+ +++ +V+
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 400 GHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETD-ARI 458
G +A F M E G P+ +S V LSA ++ ++ + + Q + I
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 459 HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMK 518
T ++ K G A VF + + PL N I A G +A Y ++
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAM----ISAYALYGNLKEAIALYRSLE 640
Query: 519 ENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR 556
GLKP+ T +L D+ + ++ +++ R
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKR 678
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 144/366 (39%), Gaps = 42/366 (11%)
Query: 168 VFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMD 227
V Q I P ++F ++ L+ RM P+++ +L ++
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVF-SRMFSHGLIPDSHVLPNLFKVCAELS 130
Query: 228 ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYT 287
A Q+ + V G+ V + H + + G + A K+ M +VVT +
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRM----SDKDVVTCS 186
Query: 288 TLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
L+ AY + + + + M S+G ++V WN ++ +++G H++A+ +F+ +
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE 407
PD T++S L + S M ++ L+ Y+
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNM---GRLIHGYV------------------------- 278
Query: 408 FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELI 467
I+ G DK + ++ +G +Y + ++ M +A + I L
Sbjct: 279 -----IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM----MEAGVCNAYITGLS 329
Query: 468 KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAH 527
+ G A +F+ + L+ V++ I ++G+ +A + +M+ G+KPN
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 528 TCNMML 533
T ML
Sbjct: 390 TIPSML 395
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 282 NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVF 341
NV + LI Y + R+ + +FN M T +LV WN L++ S G+ ++ + +F
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMP----TKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 342 RSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY------IDPDLVFCNALLSY 395
SL + ++PD + TS LS Q + D E F+ I P L + +++
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTD---EGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 396 LVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L +AG +A YDL+ E+ F PD + LL++
Sbjct: 535 LGRAGKLQEA---YDLIKEMPFEPDSCVWGALLNS 566
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 136/322 (42%), Gaps = 38/322 (11%)
Query: 214 NTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQN 273
+ + S++ + ++ +A +++ LM ++ + W ++++ + Q G +++A +L +
Sbjct: 280 SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVS 339
Query: 274 MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGR 333
M G SPN++ Y TLI Y + ++ A LF+ + + G PD + +I+ +A
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 334 HQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALL 393
+++A ++ L + +P+ + L + L+
Sbjct: 400 YEEAKHYYQELKRCGYKPNSFNLFT---------------------------------LI 426
Query: 394 SYLVKAGHPSDAAEFYDLMIELGFAPDKYS--FAVLLSALCAAGKIYEAVKVYRGGVMSS 451
+ K G A + + M +G +YS ++L A GKI V +G +
Sbjct: 427 NLQAKYGDRDGAIKTIEDMTGIGC---QYSSILGIILQAYEKVGKIDVVPCVLKGSFHNH 483
Query: 452 QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
+ + +++ +K G + ++ R ++ Y + IC+ SG+ DA
Sbjct: 484 IRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAV 543
Query: 512 TFYDQMKENGLKPNAHTCNMML 533
Y+ E+ + N H + M+
Sbjct: 544 KIYNHKMESDEEINLHITSTMI 565
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/523 (19%), Positives = 211/523 (40%), Gaps = 30/523 (5%)
Query: 94 QAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFM 153
Q + +L +IG L + S+ ++ RA + Y +++ G+ PN+F +
Sbjct: 369 QGLFHRLCNIG--LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Query: 154 DAHFRIGNLHLALTVFQQIQPPN--FFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYP 211
+ + G+ A+ + + + + + K H
Sbjct: 427 NLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRL 486
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N +F SL+ A+ K + + LL F +++ +LI + G L A K+
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIY 546
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+ + + N+ +T+I Y ++A L+ +++S+G D + +++++ + KA
Sbjct: 547 NHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKA 606
Query: 332 GRHQDALGVFRSLSKQ-NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPDLVF 388
G ++A V + +Q +I PD Y L + + + D L R I +
Sbjct: 607 GSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEM 666
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK-----V 443
N +++ +A + + ++ MI GF P+ +F VLL A K+++ V
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA-KLFKKVNELFLLA 725
Query: 444 YRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLR 503
R GV+ D + II K Y ++ K + + AY + A +
Sbjct: 726 KRHGVV-----DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 504 SGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRN 563
+ + +MK++ P+ +T N+M+ + ++ + +V +LKE+ S +
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLG----- 835
Query: 564 FLNLCNFPCRSDAY------YSTSNLLAEMREMGLLPAKALHA 600
+LC++ AY L+ EMR ++P K +
Sbjct: 836 -PDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYT 877
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 126/315 (40%), Gaps = 7/315 (2%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFH----LSN 189
Y ++S G V + ++ + + + G+L A +V + + D+ LF +
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 190 XXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN 249
R+ + + N ++ ++N + L E M+ G +
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 250 VWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
+ +L+ + + + N+L G +V++Y T+I AY ++ T+ S+ +M
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
+ G + L +N L+D + K + + + + + K PD YT +++ +
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWI 819
Query: 370 DLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVL 427
D + + L + PDL N L+ G +A M PDK ++ L
Sbjct: 820 DEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNL 879
Query: 428 LSALCAAGKIYEAVK 442
++AL + EA+K
Sbjct: 880 VTALRRNDEFLEAIK 894
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%)
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
+P++ +F+ +LN E +++ LG++ ILI C+ G L+ A +
Sbjct: 164 WPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
LL PNV+T++ LI+ + + +A L M PD + +N+LI
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYT 355
K GR ++ + + + + +P+P T
Sbjct: 284 KKGRVEEGIDLLERMKVKGCEPNPGT 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 17/259 (6%)
Query: 78 HMVPVLGRLTRRHKTLQAILLQLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQM 137
+++ + G L R IL + GC + SF +L +L A + + +
Sbjct: 136 NLMRIYGNLAGRINRAIEILFGMPDFGC--WPSSKSFNFILNLLVSAKLFDEIHKIFVSA 193
Query: 138 QSYGFVPNTFARNLFMDAHFRIGNLHLALTVF----QQIQPPNFFTFDITLFHLSNXXXX 193
G + N+ + GNL AL + QQ PN TF + N
Sbjct: 194 PKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
+RM + P+ TF+ L++ K + E LL M V G + + +
Sbjct: 254 EEAFKLL-ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 254 LIHKHCQLGILDV-----ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNH 308
+++ G+LD A +++ M+ G P+ ++Y ++ E+ V + +
Sbjct: 313 VLY-----GLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQ 367
Query: 309 MRSAGHTPDLVLWNVLIDC 327
M + G P ++W ++ C
Sbjct: 368 MVNHGFVPKTLMWWKVVQC 386
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 6/156 (3%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKL 270
PN TF L+ F EA++LL M I+ + ILI + G ++ L
Sbjct: 235 PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL 294
Query: 271 LQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN--VLIDCH 328
L+ M GC PN TY ++ ++ R +A + + M S G P + + VL C
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMIC 364
+K+ D V R + P TL W + C
Sbjct: 355 TKSVVEMDW--VLRQMVNHGFVPK--TLMWWKVVQC 386
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 84/205 (40%)
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
N +L+ LV A + + + +LG D +L+ LC +G + A+++
Sbjct: 171 NFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQ 230
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPD 509
+ + +I GK+ A + ++ + D + + + I L + GR +
Sbjct: 231 QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290
Query: 510 ACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCN 569
++MK G +PN T +L+ +K + +M+ +MI + S ++ +
Sbjct: 291 GIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVL 350
Query: 570 FPCRSDAYYSTSNLLAEMREMGLLP 594
C + + +L +M G +P
Sbjct: 351 GLCETKSVVEMDWVLRQMVNHGFVP 375
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 144/346 (41%), Gaps = 41/346 (11%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
+H++L F K+ L +A Q M ++ V +T L+ L V ++ ++
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
+G S ++ T L Y + +V +A +F+ M DLV WN ++ +S+ G +
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMAR 218
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE-----------------PALV 378
AL + +S+ ++N++P T+ S L + R+ + E ALV
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 379 FRY----------------IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKY 422
Y ++ ++V N+++ V+ +P +A + M++ G P
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 423 SFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQA 482
S L A G + +++ V + + + +I K + AA++F +
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 483 VVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
R V++ I ++GR DA ++ QM+ +KP+ T
Sbjct: 399 QSRTL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 23/394 (5%)
Query: 141 GFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXX 200
GF + FA + + + ++ A VF ++ + +++ T+ +
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWN-TIVAGYSQNGMARMALEM 223
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
K M + P+ T S+L A + + ++ G + G VN+ T L+ + +
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTP-DLV 319
G L+ A +L ML NVV++ ++I AY+++ +A +F M G P D+
Sbjct: 284 CGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 320 LWNVLIDCHS----KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEP 375
+ L C + GR L V L + N+ + S +SM C+ + D
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDR-NVS----VVNSLISMYCKCKEVD--TAA 392
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
++ + LV NA++ + G P DA ++ M PD +++ +++A+ A
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI-AEL 451
Query: 436 KIYEAVKVYRGGVMSS-QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
I K G VM S + + + T ++ K G ++A +F R N
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM- 510
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
I G A +++M++ +KPN T
Sbjct: 511 ---IDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 211 PNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWT--ILIHKHCQLGILDVAN 268
PNA TF+S++ +F++ + E + + + + S NV++ +L+ +C G++ A
Sbjct: 243 PNATTFNSMMVSFYR-EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAE 301
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
K+ + M G ++V Y T+I + V A LF M G + + L++ +
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGY 361
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVF 388
KAG L V+R + ++ + D T+ + + +C R + E A + + + +F
Sbjct: 362 CKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMF 421
Query: 389 -----CNALL-SYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
C LL L + G A M+ GF P + ++ + G
Sbjct: 422 YPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG 474
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 139/350 (39%), Gaps = 27/350 (7%)
Query: 263 ILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWN 322
+L V L+++ G +P V + LIK+ ++S + A + +RS G + N
Sbjct: 144 VLKVFRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCN 201
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
LI ++ R + A ++ + ++ D ++ MI + I
Sbjct: 202 ALI---TEVSRRRGASNGYK-MYREVFGLDDVSVDEAKKMIGK----------------I 241
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFY-DLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
P+ N+++ + G + ++ E+G +P+ YS+ VL+ A CA G + EA
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAE 301
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
KV+ + D + +I L + + A +F+ ++ + Y +
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGY 361
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQ---MLKEMIGSRIE 558
++G Y +MK G + + T ++ ++D Q+V + ++K+ + +
Sbjct: 362 CKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMF 421
Query: 559 LSDRNFLN-LCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHALSSDKYA 607
RN L C N+ AEM G P++ + D Y
Sbjct: 422 YPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYG 471
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 121/296 (40%), Gaps = 20/296 (6%)
Query: 224 FKMDALLEAYQLLGLMVVLG-IQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCS-- 280
FK L +A L + I + ++ + + +++ KL Q++L + +
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 281 PNVVTYTTLIK--AYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDAL 338
P T+ L+ + +++ + N M + G PD V ++ + + GR +A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID---------PDLVFC 389
+ + L++++ PD YT L +C+ + DL +V+ ++D PDLV
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCK--DL----HVVYEFVDEMRDDFDVKPDLVSF 233
Query: 390 NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVM 449
L+ + + + +A + GF PD + + ++ C K EAV VY+
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 450 SSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
E D + +I L KAG+ A K V Y D Y + + R G
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 5/210 (2%)
Query: 159 IGNLH--LALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTF 216
I N+H L L V ++P + T DI + L K + H P+ T+
Sbjct: 140 ISNVHRVLNLMVNNGLEP-DQVTTDIAVRSLCETGRVDEAKDLM-KELTEKHSPPDTYTY 197
Query: 217 HSLLNAFFKMDALLEAYQLLGLMVV-LGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
+ LL K L Y+ + M ++ + +TILI C L A L+ +
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
+ G P+ Y T++K + ++ ++A ++ M+ G PD + +N LI SKAGR +
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 336 DALGVFRSLSKQNIQPDPYTLTSWLSMICQ 365
+A +++ +PD T TS ++ +C+
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 28/297 (9%)
Query: 295 ESNRVTDASNLFNHMRSAGHTP-DLVLWNVLIDCHSKAGRHQDALGVFRSL--SKQNIQP 351
+S ++DA +LFN + + P DL N ++ + D + +F+ + S+ N +P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 352 DPYTLTSWLSMICQS---------RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
T LS C++ R+ +L+ V ++PD V + + L + G
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLM-----VNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK---IYEAVKVYRGGVMSSQETDARIH 459
+A + + E PD Y++ LL LC +YE V R + D
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF--DVKPDLVSF 233
Query: 460 TVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV---GICALLRSGRTPDACTFYDQ 516
T++I + + A + + + D Y G C L + +A Y +
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS---EAVGVYKK 290
Query: 517 MKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR 573
MKE G++P+ T N ++F K +++ LK M+ + E + +L N CR
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 125/284 (44%), Gaps = 18/284 (6%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVN---VWTILIHKHCQLGILDVAN 268
+ +F++L++A + ++EA +L V+G FSV+ + +++ +LG
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+ + M G + ++ +Y+ + +S + A L+ M+S D+V +N +I
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQS-------RMFDLLPEPALVFRY 381
+ + + VFR + ++ +P+ T + + ++C+ RM D +P+ R
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK-----RG 324
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
PD + L S L K PS+ + MI G P ++ +L+ G + +
Sbjct: 325 CQPDSITYMCLFSRLEK---PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVL 381
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR 485
V++ S D+ + +I LI+ G MA ++ + R
Sbjct: 382 YVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
++ + M GC PNV T+ T+IK E R+ DA + + M G PD + + L
Sbjct: 280 RVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF--- 336
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYID----- 383
S+ + + L +F + + ++P + +++ ++ + + L V++ +
Sbjct: 337 SRLEKPSEILSLFGRMIRSGVRP---KMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDT 393
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDK 421
PD NA++ L++ G A E+ + MIE G +P +
Sbjct: 394 PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 22/248 (8%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
N + +L + K+ + + M G+ + ++I + C+ G A KL
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKA 331
+ M +VV Y T+I+A S V +F MR G P++ N +I +
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 332 GRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPA--------LVFRYID 383
GR +DA + + K+ QPD T +C +F L +P+ ++ +
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITY------MC---LFSRLEKPSEILSLFGRMIRSGVR 358
Query: 384 PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG-----KIY 438
P + L+ + G + M E G PD ++ ++ AL G + Y
Sbjct: 359 PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREY 418
Query: 439 EAVKVYRG 446
E + RG
Sbjct: 419 EEEMIERG 426
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 38/298 (12%)
Query: 267 ANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLID 326
N + +++ G P + LI Y++ N + DA LF+ M +++ W +I
Sbjct: 80 GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMIS 135
Query: 327 CHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDL 386
+SK HQ AL + + + N++P+ YT +S L C + ++ ++ D+
Sbjct: 136 AYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS-CNGMSDVRMLHCGIIKEGLESDV 194
Query: 387 VFCNALLSYLVKAGHPSDAAEFYDLMIEL----------GFAPDKYSFAVL--LSALCAA 434
+AL+ K G P DA +D M+ GFA + S L + A
Sbjct: 195 FVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA 254
Query: 435 GKIYE------AVKVYRGGVMSSQETDARIHTV-----------IIVELIKAGKYLMAAT 477
G I E ++ G + A +H V ++ K G A
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 478 VFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFT 535
VF Q R D + ++ I L ++G + +A +++MK +G KPN T +LF
Sbjct: 315 VFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 137/342 (40%), Gaps = 54/342 (15%)
Query: 141 GFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXX 200
G P F N+ ++ + + L+ A +F Q+ N ++ T+ +
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISW-TTMISAYSKCKIHQKALEL 149
Query: 201 XKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
MLR + PN T+ S+L + + + + L ++ G++ V V + LI +
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG------- 313
LG + A + M+ TG + + + ++I + +++R A LF M+ AG
Sbjct: 207 LGEPEDALSVFDEMV-TG---DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 314 --------------------------HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQ 347
+ DL+L N L+D + K G +DAL VF + ++
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 348 NIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-----DPDLVFCNALLSYLVKAGHP 402
++ +W +MI E +F + P+ + +L AG
Sbjct: 323 DV-------ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 403 SDAAEFYDLMIEL-GFAPDKYSFAVLLSALCAAGKIYEAVKV 443
D ++ M +L G P + + ++ L AGK+ +AVK+
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKL 417
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 12/267 (4%)
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G + + K+ + G S + L+ Y + +++A + + M D+V W
Sbjct: 154 GTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR----DVVSW 209
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY 381
N L+ +++ R DAL V R + I D T+ S L + + +++ + F+
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 382 IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAV 441
LV N ++ +K P +A E Y M GF PD S +L A +
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 442 KVYRGGVMSSQE--TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGIC 499
K++ G + ++ + + +I K G A VF+ R D V++ I
Sbjct: 330 KIH--GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR----DVVSWTAMIS 383
Query: 500 ALLRSGRTPDACTFYDQMKENGLKPNA 526
A SGR DA + +++++GL P++
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDS 410
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 148/375 (39%), Gaps = 68/375 (18%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
W ++I + + + A +L M G P+ V+ T+++ A +++ ++ + ++
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMI------- 363
P+L+L N LID ++K G + A VF ++ +++ SW +MI
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV-------VSWTAMISAYGFSG 389
Query: 364 --CQS-RMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIE-LGFAP 419
C + +F L + LV PD + L+ AG + + LM + P
Sbjct: 390 RGCDAVALFSKLQDSGLV-----PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 420 DKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE-------TDARIHTVIIVELIKAGKY 472
A ++ L AGK+ EA + + M E R+H+ + L+ A K
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 473 LMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMM 532
A P + Y + ++GR + + MK GLK N N+
Sbjct: 505 FQLA-----------PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV- 552
Query: 533 LFTFYKEKDLQKVNQMLKE-MIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMG 591
+VN+++ ++G R + P + Y L+ +M+E+G
Sbjct: 553 -----------EVNRIIHTFLVGDR------------SHPQSDEIYRELDVLVKKMKELG 589
Query: 592 LLP--AKALHALSSD 604
+P ALH + +
Sbjct: 590 YVPDSESALHDVEEE 604
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 162/372 (43%), Gaps = 36/372 (9%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M+ + + T S+LNA +D L+ Q G ++ G + +V + LI + +
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC 288
Query: 262 GILDV---ANKLLQNMLHTGCSPNVVTYTTLIKAY-MESNRVTDASNLFNHMRSAGHTPD 317
G D + K+ Q +L SP++V + T+I Y M +A F M+ GH PD
Sbjct: 289 GGCDGMYDSEKVFQEIL----SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPD 344
Query: 318 LVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL-SMICQSR-------MF 369
+ + S + K +I + ++ + L S+ +S +F
Sbjct: 345 DCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVF 404
Query: 370 DLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
D +PE + V N ++ + GH ++A Y M++ G AP+K +F +LS
Sbjct: 405 DRMPEL---------NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQ-ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYP 488
A GK+ E + + + + E +A ++ +I L +AGK L A F A+ Y
Sbjct: 456 ACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK-LEEAERFIDAM--PYK 512
Query: 489 LDNVAYAVGICALLRSGRTPDACTFYDQMKEN--GLKPNAHTCNMMLFTFYKE-KDLQKV 545
+VA+A ALL + R ++ ++P A T +ML Y + + +++
Sbjct: 513 PGSVAWA----ALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEM 568
Query: 546 NQMLKEMIGSRI 557
+ K M G RI
Sbjct: 569 ASVRKSMRGKRI 580
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 153/394 (38%), Gaps = 25/394 (6%)
Query: 144 PNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKR 203
PN F+ N+ + A+ + +H+A +F +I P+ +++ TL KR
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYN-TLISGYADARETFAAMVLFKR 130
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
M ++ + + T L+ A L++ QL V G +V + + + G+
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
L A + M + V++ ++I AY + A L+ M G D+
Sbjct: 189 LREAVSVFYGMDEL---RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 324 LIDC-----HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALV 378
+++ H GR L K + + + + + D + + V
Sbjct: 246 VLNALTSLDHLIGGRQ-----FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 379 FRYI-DPDLVFCNALLS-YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGK 436
F+ I PDLV N ++S Y + +A + + M +G PD SF + SA C+
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA-CSNLS 359
Query: 437 IYEAVKVYRGGVMSSQETDARI--HTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAY 494
K G + S RI + +I K+G A VF R L+ V++
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD----RMPELNAVSF 415
Query: 495 AVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
I + G +A Y +M ++G+ PN T
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%)
Query: 218 SLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHT 277
+++N F K EA ++ + + + I I+ +C+L + A L M+
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 278 GCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDA 337
G VV Y+ ++ Y ++ R++DA L M+ G P++ ++N LID H +A + A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFR 380
+++ + + + PD + TS +S +S+ + E FR
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFR 520
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 21/306 (6%)
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT----PDLV 319
+ V ++L Q++ G P+ Y +++A+ + LF +S +
Sbjct: 193 IQVFDRLKQSV---GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGS 249
Query: 320 LWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWL--------SMICQSRMFDL 371
++ ++ +K+GR +AL V + + I P+ L S L ++ ++F
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGI-PESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 372 LPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
L+ DP++ C ++ V+ G+ E M + +++
Sbjct: 309 AGGKKLL---KDPEM--CLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGF 363
Query: 432 CAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDN 491
EAVKVY + E + + I + KY A +F + V + +
Sbjct: 364 SKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCV 423
Query: 492 VAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKE 551
VAY+ + ++ R DA +MK+ G KPN N ++ + DL++ ++ KE
Sbjct: 424 VAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKE 483
Query: 552 MIGSRI 557
M +++
Sbjct: 484 MKRAKV 489
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 133/360 (36%), Gaps = 75/360 (20%)
Query: 150 NLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHY 209
N F+ A L LA++ Q+Q PN F ++ LF RMLR
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYN-ALFKGFVTCSHPIRSLELYVRMLRDSV 867
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV------------------- 250
P++ T+ SL+ A E+ Q + G F V +
Sbjct: 868 SPSSYTYSSLVKASSFASRFGESLQ--AHIWKFGFGFHVKIQTTLIDFYSATGRIREARK 925
Query: 251 ------------WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNR 298
WT ++ + ++ +D AN L M N T LI YM
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM----SEKNEATSNCLINGYMGLGN 981
Query: 299 VTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTS 358
+ A +LFN M D++ W +I +S+ R+++A+ VF + ++ I PD T+++
Sbjct: 982 LEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 359 WLSMICQ--------------------------SRMFDL------LPEPALVFRYIDPDL 386
+S S + D+ L LVF +
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1097
Query: 387 VFC-NALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
+FC N+++ L G +A + + M P+ +F + +A AG + E ++YR
Sbjct: 1098 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 1157
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 138/318 (43%), Gaps = 25/318 (7%)
Query: 134 YHQMQSYGFVPNTFARNLFMDAHFRIGNLHL--ALTVFQQIQPPNFFTFDITLFHLSNXX 191
++ ++ G + + N +D + R G L + A+ +F+++ + +++ L L
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL---- 195
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+R+ + +++++L+ + + + +A++L M + + W
Sbjct: 196 -VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSW 250
Query: 252 TILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS 311
+ ++ + + G +++A + M + NVVT+T +I Y E + +A L + M +
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 312 AGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ----SR 367
+G D ++ +++G + + L + N+ + Y L + L M + +
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 368 MFDLLPEPALVFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
FD VF I DLV N +L L GH +A E + M G PDK +F
Sbjct: 369 AFD-------VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 427 LLSALCAAGKIYEAVKVY 444
+L + AG I E + +
Sbjct: 422 VLCSCNHAGLIDEGIDYF 439
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 152/378 (40%), Gaps = 39/378 (10%)
Query: 163 HLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNA 222
+LA+ VF Q+Q PN + +L M R + + T+ LL A
Sbjct: 68 NLAVRVFNQVQEPNVHLCN-SLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA 126
Query: 223 FFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDV--ANKLLQNMLHTGCS 280
L + + LG+ + V LI + + G L V A KL + M
Sbjct: 127 CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER--- 183
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
+ V++ +++ +++ + DA LF+ M DL+ WN ++D +++ A +
Sbjct: 184 -DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFEL 238
Query: 341 FRSLSKQNIQPDPYTLTSWLSMI----------CQSRMFDLLPEPALVFRYIDPDLVFCN 390
F + ++N SW +M+ MFD +P PA ++V
Sbjct: 239 FEKMPERNT-------VSWSTMVMGYSKAGDMEMARVMFDKMPLPA-------KNVVTWT 284
Query: 391 ALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMS 450
+++ + G +A D M+ G D + +L+A +G + ++++ S
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 451 SQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDA 510
+ ++A + ++ K G A VF + +K D V++ + L G +A
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFND-IPKK---DLVSWNTMLHGLGVHGHGKEA 400
Query: 511 CTFYDQMKENGLKPNAHT 528
+ +M+ G++P+ T
Sbjct: 401 IELFSRMRREGIRPDKVT 418
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 34/272 (12%)
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG--RHQDALGVFR 342
TY L+KA + + + NH+ G + D+ + N LIDC+S+ G +DA+ +F
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 343 SLSKQNIQPDPYTLTSWLSMIC----------QSRMFDLLPEPALVFRYIDPDLVFCNAL 392
+S+++ SW SM+ R+FD +P+ DL+ N +
Sbjct: 179 KMSERDT-------VSWNSMLGGLVKAGELRDARRLFDEMPQ---------RDLISWNTM 222
Query: 393 LSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQ 452
L + S A E ++ M E + S++ ++ AG + A ++ M
Sbjct: 223 LDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDK--MPLP 276
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
+ T+II + G A + Q V D A + A SG
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR 336
Query: 513 FYDQMKENGLKPNAHTCNMMLFTFYKEKDLQK 544
+ +K + L NA+ N +L + K +L+K
Sbjct: 337 IHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 17/307 (5%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCS---PNVVTYTTLIKAYMESNRVTDASNLFN 307
W +I + Q G + K+ + ML CS PN VT ++ +A +S+ + +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAML--ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 308 HMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
M DL L N +I ++K G A +F +S+++ ++ ++I
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDS-------VTYGAIISGYM 311
Query: 368 MFDLLPEPALVFRYIDP-DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
L+ E +F ++ L NA++S L++ H + + MI G P+ + +
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 427 LLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRK 486
LL +L + + +++ + + + + + T II K G L A VF R
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS 431
Query: 487 YPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVN 546
+A+ I A G + AC+ +DQM+ G KP+ T +L F D
Sbjct: 432 L----IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQ 487
Query: 547 QMLKEMI 553
+ M+
Sbjct: 488 HIFDSML 494
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 174/443 (39%), Gaps = 32/443 (7%)
Query: 160 GNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSL 219
G++ A ++ P + ++ + SN + MLR P+ T+ L
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ-MLRFGLLPDHMTYPFL 114
Query: 220 LNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGC 279
+ + ++ L +V G+++ + + LIH + A KL M H
Sbjct: 115 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH--- 171
Query: 280 SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
N+VT+ +++ AY +S V A +F+ M D+V W+ +ID + K G + AL
Sbjct: 172 -KNLVTWNSILDAYAKSGDVVSARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALE 226
Query: 340 VFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI-DPDL----VFCNALLS 394
+F + + + + +S+IC L V RYI D L + +L+
Sbjct: 227 IFDQMMR--MGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLID 284
Query: 395 YLVKAGHPSDA-AEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE 453
K G DA + FY ++ D + ++ L + G I E+++++ S +
Sbjct: 285 MYAKCGSIGDAWSVFYRASVK---ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 454 TDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTF 513
D ++ G A FK + YA + L R+G DA F
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 514 YDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSR-IEL---SDRNFLNLCN 569
+M +KP +L +L+ L E +G + IEL +D ++ L N
Sbjct: 402 ISEMP---IKPTGSMLGALLNGCINHGNLE-----LAETVGKKLIELQPHNDGRYVGLAN 453
Query: 570 FPCRSDAYYSTSNLLAEMREMGL 592
+ + + ++ M + G+
Sbjct: 454 VYAINKQFRAARSMREAMEKKGV 476
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
+L + M G N VTYTTLI+ ++ A +F M S G PD++ +N+L+D
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 329 SK---------AGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF 379
K AG+ +D +F SLS + ++P+ T T+ +S C+ + E +F
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKE---EAYTLF 118
Query: 380 RYID-----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSAL 431
R + PD N L+ ++ G + +AE M FA D ++ ++ L
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 204 MLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGI 263
MLR +P T++S+++ F K D + +A ++L M G V ++ LI+ +C+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
+D ++ M G N VTYTTLI + + + A +L N M S G PD + ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 324 LIDCHSKAGRHQDALGVFRSLSK 346
++ + A + L K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P +TY ++I + + +RV DA + + M S G +PD+V ++ LI+ + KA R + + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 341 FRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAG 400
F + ++ I + T T+ + CQ G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQ---------------------------------VG 94
Query: 401 HPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
A + + MI G APD +F +L+ LC+ ++ +A +
Sbjct: 95 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 137
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
+I C+ +D A ++L +M GCSP+VVT++TLI Y ++ RV + +F M G
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 75
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSR 367
+ V + LI + G A + + + PD T L+ +C +
Sbjct: 76 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 179/428 (41%), Gaps = 88/428 (20%)
Query: 245 QFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASN 304
FS + L+ + + G D A + + M + ++V++ L+ Y+ S + +A
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMP----AKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 305 LFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLT------S 358
+F M+ +++ W ++I ++ G ++ L +F + ++ +P Y + +
Sbjct: 373 IFKEMKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 359 WLSMICQSRMF--------------------------DLLPEPALVFRYIDP-DLVFCNA 391
L C + + ++ E VFR + D V NA
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 392 LLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSS 451
L++ L + GH ++A + Y+ M++ G PD+ + +L+A AG + + K + S
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF-----DS 543
Query: 452 QETDARI-----HTVIIVELI-KAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSG 505
ET RI H +++L+ ++GK+ A ++V+ P A I L SG
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDA-----ESVIESLPFKPTAE---IWEALLSG 595
Query: 506 RTPDACTFYDQM--------KENGLKPNAHTCNMMLFTFY----KEKDLQKVNQML---- 549
C + M K GL P M+L + + +++ +V +++
Sbjct: 596 -----CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRG 650
Query: 550 --KEMIGSRIELSDR--NFL-NLCNFPCRSDAYYSTSNLLAEMREMGLLPAKA--LHALS 602
KE+ S IE+ + FL + + P Y +L EMR +G +P + LH +
Sbjct: 651 VKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVE 710
Query: 603 SDKYAESL 610
SD + E +
Sbjct: 711 SDGHKEDM 718
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 49/310 (15%)
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
WT ++ + + G D+ +LL+ M + +V Y +I Y+ +A + M
Sbjct: 222 WTTMMTGYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMV 278
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTL---TSWLSMICQSR 367
S+G D + +I + AG Q LG + + ++ + ++ S +S+ +
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQ--LG--KQVHAYVLRREDFSFHFDNSLVSLYYKCG 334
Query: 368 MFDLLPEPALVFRYIDP-DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAV 426
FD E +F + DLV NALLS V +GH +A + M E + S+ +
Sbjct: 335 KFD---EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE----KNILSWMI 387
Query: 427 LLSALCAAGKIYEAVKVYR------------------------GGVMSSQETDARIHTVI 462
++S L G E +K++ G + Q+ A++ +
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 463 IVELIKAGKYLMA----ATVFKQA--VVRKYP-LDNVAYAVGICALLRSGRTPDACTFYD 515
+ AG L+ V ++A V R P LD+V++ I AL + G +A Y+
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 516 QMKENGLKPN 525
+M + G++P+
Sbjct: 508 EMLKKGIRPD 517
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 157/380 (41%), Gaps = 66/380 (17%)
Query: 150 NLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHY 209
N +D + + GNL + F I+ N ++ L +N +ML+M +
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFL--QMLQMGF 412
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
P TF + L K + E QL ++V +G + + V + L+ + + N+
Sbjct: 413 RPTEYTFSTAL----KSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK-------NQ 461
Query: 270 LLQN---MLHTGCSP-NVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI 325
L+ + +L P +VV + Y + ++ L + + PD V WN+ I
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ----PDTVSWNIAI 517
Query: 326 DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL-------- 377
S++ H++ + +F+ + + NI+PD YT S LS+ S++ DL ++
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC--SKLCDLTLGSSIHGLITKTD 575
Query: 378 ---------------------------VFRYI-DPDLVFCNALLSYLVKAGHPSDAAEFY 409
VF + +L+ AL+S L G+ +A E +
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 410 DLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARI-HTVIIVELIK 468
+ LGF PD+ SF +L+A G + E + +++ M + + H V+L+
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK--MKDYGVEPEMDHYRCAVDLLA 693
Query: 469 AGKYLMAATVFKQAVVRKYP 488
YL A + ++R+ P
Sbjct: 694 RNGYLKEA----EHLIREMP 709
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 19/273 (6%)
Query: 260 QLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLV 319
+LG + +A K+ M N V++ T+IK Y + V A +F+ MR G+ P+
Sbjct: 61 KLGEVSLAGKVFDQMPER----NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQS 116
Query: 320 LWNVLIDCHS---KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPA 376
+ L+ C S +AG L SL D + T ++C DLL
Sbjct: 117 TVSGLLSCASLDVRAGTQLHGL----SLKYGLFMADAFVGT---CLLCLYGRLDLLEMAE 169
Query: 377 LVFRYID-PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
VF + L N ++S L G + F+ ++ +G + + SF +L +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 436 KIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYA 495
+ + +++ + + + +I K G MA +F+ A D V++
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA----GSWDIVSWN 285
Query: 496 VGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
ICA +S A + M E+G PN T
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGT 318
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 159/387 (41%), Gaps = 20/387 (5%)
Query: 136 QMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXX 195
Q+Q+ + + N + +G+ + + +F + PN ++F+ + L+N
Sbjct: 55 QIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHE 114
Query: 196 XXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILI 255
+RM P+ T++ + A K++ + + + +G++ V++ LI
Sbjct: 115 AALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLI 174
Query: 256 HKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT 315
+ + G + A KL + + V++ ++I Y E+ DA +LF M G
Sbjct: 175 MMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 316 PD-LVLWNVLIDCHS----KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
PD L ++L C + GR + + + + I + + +SM + D
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAI-----TKKIGLSTFLGSKLISMY--GKCGD 283
Query: 371 LLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
L + + I D V A+++ + G S+A + + M + G +PD + + +LSA
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 431 LCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLD 490
+ G + ++ S + + + T ++ K G+ A VF+ V+ +
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----N 399
Query: 491 NVAYAVGICALLRSGRTPDACTFYDQM 517
+ I A G +A +D+M
Sbjct: 400 EATWNAMITAYAHQGHAKEALLLFDRM 426
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 129/358 (36%), Gaps = 42/358 (11%)
Query: 280 SPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALG 339
+P V+ L A ++ V A + + + G P+ L + C S+ G ++A+
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLD---TTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 340 VFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLV 397
V+ L I T S L ++R D E +V D + + C L+ L
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRC--LIRALC 224
Query: 398 KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDAR 457
G S+ E ++ G P +Y +A L+S C G +V + +
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 458 IHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAV---GICA-------------L 501
I+ II L K L A +FK + Y D V Y G C +
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 502 LRSGRTPDACT-------------------FYDQMKENGLKPNAHTCNMMLFTFYKEKDL 542
++ G P+ FY++M NG +CN M+ F
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 543 QKVNQMLKEMIGSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGLLPAKALHA 600
+ ++ K M + + + + L C+ + L E++ +GL P+ +A
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYA 462
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 105/246 (42%), Gaps = 4/246 (1%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K M+ + ++ L+ A + E Y+LL + G+ V+ LI C++
Sbjct: 204 KEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEI 261
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G +++L M+ P++ Y +IK + + +A +F +++ G+ PD V++
Sbjct: 262 GNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVY 321
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE--PALVF 379
+I + G A ++ + K+ ++P+ + + + L+ ++
Sbjct: 322 TTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR 381
Query: 380 RYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYE 439
++ CN ++ G +A E + M E G P+ ++ L+ C K+ +
Sbjct: 382 NGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEK 441
Query: 440 AVKVYR 445
+K+Y+
Sbjct: 442 GLKLYK 447
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 10/261 (3%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
LI C G + +LL+ L G P Y LI + E S + + M +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLP 373
H P + ++ +I + +A +F++L + PD T+ + C+ L
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW--LGS 336
Query: 374 EPALVFRYID----PDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLS 429
L F I P+ N ++ K G S FY+ M+ G+ S ++
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
C+ GK EA ++++ + +A + +I K K ++K+
Sbjct: 397 GFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456
Query: 490 DNVAYAVGICALLRSGRTPDA 510
+AYA AL+R+ + D+
Sbjct: 457 SGMAYA----ALVRNLKMSDS 473
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 67/143 (46%)
Query: 209 YYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVAN 268
Y P+ + +++ F + L A +L M+ G++ + + ++IH H + G + +
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
ML G +++ T+IK + + +A +F +M G TP+ + +N LI
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Query: 329 SKAGRHQDALGVFRSLSKQNIQP 351
K + + L +++ L ++P
Sbjct: 434 CKENKVEKGLKLYKELKALGLKP 456
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/294 (17%), Positives = 119/294 (40%), Gaps = 6/294 (2%)
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
G+++ A ++ + G S +VVT +++ +++ ++ L M + + +
Sbjct: 159 GLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI-- 216
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPE---PALV 378
LI G + + + KQ + P Y +S C+ + + E +
Sbjct: 217 RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIA 276
Query: 379 FRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIY 438
+ + P + ++ L +A + + + G+APD+ + ++ C G +
Sbjct: 277 WNHF-PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 439 EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGI 498
A K++ + + + V+I K G+ + + + + Y ++ I
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 499 CALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
G++ +A + M E G+ PNA T N ++ F KE ++K ++ KE+
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 203 RMLRMHYYPNANTFHSLLNAFFKMD--ALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQ 260
M++ PN ++ +++ FK +L+EA+ M+ G ++ +I C
Sbjct: 343 EMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF--YNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 261 LGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVL 320
G D A ++ +NM TG +PN +TY LIK + + N+V L+ +++ G P +
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMA 460
Query: 321 WNVLI 325
+ L+
Sbjct: 461 YAALV 465
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/386 (18%), Positives = 158/386 (40%), Gaps = 46/386 (11%)
Query: 132 QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXX 191
+ + +++ GFVP N + + + G+L A VF ++ PN D+ +++
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM--PNR---DLCSWNVMVNG 160
Query: 192 XXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVW 251
+++ ++ ++ +++ + K D EA L LM + N++
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVP-NSRPNIF 219
Query: 252 TILIHKHCQL--GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHM 309
T+ I + ++ +++ G + V +++L+ Y + + +A N+F+ +
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 310 RSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMF 369
D+V W +ID + K+ R ++ +F L +P+ YT L+
Sbjct: 280 VEK----DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE 335
Query: 370 DL-----------------LPEPALVFRYID----------------PDLVFCNALLSYL 396
+L +LV Y PDLV +L+
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGC 395
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDA 456
+ G P +A +++DL+++ G PD +F +LSA AG + + ++ + + +
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 457 RIHTVIIVELI-KAGKYLMAATVFKQ 481
H +V+L+ ++G++ +V +
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISE 481
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 267 ANKLLQN---MLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNV 323
KLL+ +L P TY LI+ ++ + + + H+R++G P +V+WN
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 324 LIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVF-RYI 382
L+ ++K G DA VF + ++ L SW M+ LL E +F
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRD-------LCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA-PDKYSFAVLLSALCAAGKIYEAV 441
+ D A+++ VK P +A Y LM + + P+ ++ ++ ++A A I
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 442 KVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICAL 501
+++ V + ++D + + ++ K G A +F + V + D V++ I
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK----DVVSWTSMIDRY 294
Query: 502 LRSGRTPDACTFYDQMKENGLKPNAHT 528
+S R + + + ++ + +PN +T
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYT 321
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 40/303 (13%)
Query: 238 LMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVV-----TYTTLIKA 292
LM+ LG++ + ++ + +LG + L LH N V +L+
Sbjct: 116 LMLRLGVKPDRLTFPFVLKSNSKLGF-----RWLGRALHAATLKNFVDCDSFVRLSLVDM 170
Query: 293 YMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPD 352
Y ++ ++ A +F +++WNVLI+ + +A A +FRS+ ++N
Sbjct: 171 YAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS--- 227
Query: 353 PYTLTSWLSMIC----------QSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHP 402
SW ++I ++F+L+PE ++V L++ + G
Sbjct: 228 ----GSWSTLIKGYVDSGELNRAKQLFELMPEK---------NVVSWTTLINGFSQTGDY 274
Query: 403 SDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVI 462
A Y M+E G P++Y+ A +LSA +G + ++++ + + + D I T +
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 463 IVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGL 522
+ K G+ AATVF + D +++ I GR A + QM +G
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE 390
Query: 523 KPN 525
KP+
Sbjct: 391 KPD 393
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 125/316 (39%), Gaps = 19/316 (6%)
Query: 132 QAYHQMQSYGFVP-NTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNX 190
+A H FV ++F R +D + + G L A VF++ P I ++++
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE-SPDRIKKESILIWNVLIN 204
Query: 191 XXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNV 250
+ R N+ ++ +L+ + L A QL LM + +V
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVS 260
Query: 251 WTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
WT LI+ Q G + A ML G PN T ++ A +S + + ++
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 311 SAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFD 370
G D + L+D ++K G A VF +++ ++I SW +MI +
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI-------LSWTAMIQGWAVHG 373
Query: 371 LLPEPALVFRYI-----DPDLVFCNALLSYLVKAGHPSDAAEFYDLM-IELGFAPDKYSF 424
+ FR + PD V A+L+ + + F+D M ++ P +
Sbjct: 374 RFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHY 433
Query: 425 AVLLSALCAAGKIYEA 440
+++ L AGK+ EA
Sbjct: 434 VLVVDLLGRAGKLNEA 449
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 168/437 (38%), Gaps = 63/437 (14%)
Query: 135 HQMQSYGFVPNTFARNLF-MDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXX 193
H +++ F A LF M A +L A VF +I PN F ++ + ++
Sbjct: 52 HMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDP 111
Query: 194 XXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTI 253
+ YPN TF L+ A ++ +L L G+ V + V V
Sbjct: 112 VLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANS 171
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRS-- 311
LIH + G LD A K+ + +VV++ ++I +++ A LF M S
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKEK----DVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 312 --AGHTP-------------------------------DLVLWNVLIDCHSKAGRHQDAL 338
A H +L L N ++D ++K G +DA
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 339 GVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYLVK 398
+F ++ ++ D T T+ L S ++ E ++ D+V NAL+S +
Sbjct: 288 RLFDAMEEK----DNVTWTTMLDGYAISEDYEAARE--VLNSMPQKDIVAWNALISAYEQ 341
Query: 399 AGHPSDA-AEFYDLMIELGFAPDKYSFAVLLSALCAAGK------IYEAVKVYRGGVMSS 451
G P++A F++L ++ ++ + LSA G I+ +K + G M+
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIRMNF 400
Query: 452 QETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
T A IH K G + VF R D ++ I L G +A
Sbjct: 401 HVTSALIHM-----YSKCGDLEKSREVFNSVEKR----DVFVWSAMIGGLAMHGCGNEAV 451
Query: 512 TFYDQMKENGLKPNAHT 528
+ +M+E +KPN T
Sbjct: 452 DMFYKMQEANVKPNGVT 468
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 124 AGMHAMFF--QAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFD 181
AG+ A+ F Q + M G V N F + +D + + G +AL VF + N ++
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 182 --ITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLM 239
I+ + +N ML +P++ + S+L A +LL+ L G
Sbjct: 547 SMISCYSRNNLPELSIDLFNL---MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 240 VVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRV 299
+ LGI ++ LI + + G A + + M H +++T+ +I Y
Sbjct: 604 LRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH----KSLITWNLMIYGYGSHGDC 659
Query: 300 TDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSW 359
A +LF+ M+ AG +PD V + LI + +G ++ +F + KQ+ +P
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM-KQDYGIEP------ 712
Query: 360 LSMICQSRMFDLLPEPALV 378
+M + M DLL L+
Sbjct: 713 -NMEHYANMVDLLGRAGLL 730
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 7/226 (3%)
Query: 242 LGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTD 301
L + V+ + IL+ + GI +LL M G P + ++ A +++ T
Sbjct: 417 LSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTA 476
Query: 302 ASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS 361
A +F M G P ++ + L+ K + +A V+ + K I+P+ Y T+ S
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 362 MICQSRMFDLLPE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAP 419
++ + F+LL + + I+P +V NA++S + G A E++ M P
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 420 DKYSFAVLLSALCAAGK---IYEA-VKVYRGGV-MSSQETDARIHT 460
++ ++ +L+ AL K YE VK G+ +SS+ DA + +
Sbjct: 597 NEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 23/281 (8%)
Query: 269 KLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCH 328
KLL M G P+ + LI A L+ +R L + N LI
Sbjct: 332 KLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLM 391
Query: 329 SKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPAL---VFRY---- 381
KA + AL ++ L + P+P L+ L + F++L A ++R+
Sbjct: 392 GKAKKWWAALEIYEDLLDEG--PEPNNLSYELVV----SHFNILLSAASKRGIWRWGVRL 445
Query: 382 --------IDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCA 433
+ P NA+L KA + A + + M++ G P S+ LLSAL
Sbjct: 446 LNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL-E 504
Query: 434 AGKIY-EAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNV 492
GK+Y EA +V+ + E + +T + L K+ + T+ K+ + V
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVV 564
Query: 493 AYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMML 533
+ I R+G + A ++ +MK ++PN T M++
Sbjct: 565 TFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 7/279 (2%)
Query: 254 LIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAG 313
LI K L L+V + L + + P TY L+ +S + A LF+ M G
Sbjct: 98 LIAKKQWLQALEVFDMLREQTFY---QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 314 HTPDLVLWNVLIDCHSKAGRHQDALGVFRSL-SKQNIQPDPYTLTSWLSMICQSRMFDLL 372
P + L+ L+ ++++ DA + + S QPD +T ++ L + FDL+
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 373 PE--PALVFRYIDPDLVFCNALLSYLVKAGHPSDAAE-FYDLMIELGFAPDKYSFAVLLS 429
+ R I P+ V N +LS + G + D+++ PD ++ ++LS
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 430 ALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPL 489
GKI Y E + R ++I K Y ++V + ++P
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 334
Query: 490 DNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
Y I A G + +DQM+ G+K + T
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKT 373
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 26/275 (9%)
Query: 259 CQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDL 318
C +G++ ANK+ M+ NVV +T++I Y+ + + A F+ D+
Sbjct: 39 CLMGVIASANKVFCEMVE----KNVVLWTSMINGYLLNKDLVSARRYFD----LSPERDI 90
Query: 319 VLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLS---MICQSRMFDLLPEP 375
VLWN +I + + G +A +F + +++ L + + M R+FD +PE
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 376 ALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELG-FAPDKYSFAVLLSALCAA 434
VF + N L+ + G S+ + M++ G P+ + ++LSA
Sbjct: 151 N-VFSW--------NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 435 GKIYEAVKVYR-GGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVA 493
G V++ G + + D + +I K G +A VFK R D ++
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR----DLIS 257
Query: 494 YAVGICALLRSGRTPDACTFYDQMKENGLKPNAHT 528
+ I L G +A + +MK +G+ P+ T
Sbjct: 258 WNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVT 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 143/384 (37%), Gaps = 78/384 (20%)
Query: 145 NTFARNLFMDAHFRIGNLHLALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRM 204
+ + N ++ + IG++ VF + N F+++ + + + +
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 205 LRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGI-QFSVNVWTILIHKHCQLGI 263
PN T +L+A K+ A + LG + VNV LI + + G
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 264 LDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW-N 322
+++A ++ + + +++++ T+I T+A NLF+ M+++G +PD V +
Sbjct: 240 IEIAMEVFKGIKRR----DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVG 295
Query: 323 VLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYI 382
VL C G +D L F S+ F ++PE
Sbjct: 296 VLCAC-KHMGLVEDGLAYFNSMFTD---------------------FSIMPE-------- 325
Query: 383 DPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVK 442
+ C ++ L +AG + A EF + M P K AV+ + L A K+Y+ V
Sbjct: 326 ---IEHCGCVVDLLSRAGFLTQAVEFINKM------PVKAD-AVIWATLLGASKVYKKVD 375
Query: 443 VYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALL 502
+ + + +I +E ++M + ++ A
Sbjct: 376 I----------GEVALEELIKLEPRNPANFVMLSNIYGDA-------------------- 405
Query: 503 RSGRTPDACTFYDQMKENGLKPNA 526
GR DA M++ G K A
Sbjct: 406 --GRFDDAARLKVAMRDTGFKKEA 427
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 48/299 (16%)
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
++++++ + +M +LEA L M V W ++ + +G ++ ++ +M
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHT-PDLVLWNVLIDCHSKAG-- 332
NV ++ LIK Y ++ RV++ F M G P+ +++ +K G
Sbjct: 149 ER----NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 333 -------RHQDALGVFR-SLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP 384
++ + LG + ++ +N D Y + + + VF+ I
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME------------VFKGIKR 252
Query: 385 -DLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKV 443
DL+ N +++ L GH ++A + M G +PDK +F +L A G + + +
Sbjct: 253 RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 444 YRGGVMSSQETDARI-----HTVIIVELIKAGKYLMAATVFKQAVVRKYPL--DNVAYA 495
+ +S TD I H +V+L+ +L A F + K P+ D V +A
Sbjct: 313 F-----NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEF----INKMPVKADAVIWA 362
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 142/355 (40%), Gaps = 45/355 (12%)
Query: 273 NMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAG 332
M+ G PN TYT ++ +Y + +A F M+S G P+ V ++ +I KAG
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 333 RHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNAL 392
+ A+G++ + Q I P YT + LS+ ++ + P+ +F ++ + + + +
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENY---PKALSLFADMERNKIPADEV 399
Query: 393 LSYLV-----KAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGG 447
+ L+ K G DA ++ L D+ ++ + +G + +A+ V
Sbjct: 400 IRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDV---- 455
Query: 448 VMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRT 507
+E++K R PL AY V + +
Sbjct: 456 ----------------IEMMK---------------TRDIPLSRFAYIVMLQCYAKIQNV 484
Query: 508 PDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNL 567
A + + + GL P+A +CN ML + + +K +K+++ ++ +
Sbjct: 485 DCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTA 543
Query: 568 CNFPCRSDAYYSTSNLLAEM-REMGLLPAKALHALSSDKYAESLEEKYEHCAEVN 621
C+ +L+ +M RE + + + L+ + + +K+E V+
Sbjct: 544 MRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVS 598
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 135/324 (41%), Gaps = 8/324 (2%)
Query: 152 FMDAHFRIGNLHLALTVFQQIQP----PNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRM 207
+DA+ R G L A +F + P T I + L+N + L
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHIS-RTCLEK 768
Query: 208 HYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVA 267
+ + +++L+ A + L A ++ M G+ S+ + +I + + LD A
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 268 NKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDC 327
++ N +G + YT +I Y + ++++A +LF+ M+ G P +N+++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 328 HSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPALVFRY--IDPD 385
+ + H + + +++ + D T + + + +S F + + + I
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 386 LVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYR 445
++LLS LVKAG +A Y M E G +PD +L G + + Y
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 446 GGVMSSQETDARIHTVIIVELIKA 469
+ SS E D R + ++ +L KA
Sbjct: 1009 KMIRSSVEDD-RFVSSVVEDLYKA 1031
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/564 (17%), Positives = 212/564 (37%), Gaps = 70/564 (12%)
Query: 99 QLESIGCILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFR 158
+++S+G + + S ++ L + +AG Y M+S G VP+ + + +++
Sbjct: 318 EMKSLGFVPEEVTYSSVISLSV--KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYK 375
Query: 159 IGNLHLALTVFQQIQPPNFFTFDIT---LFHLSNXXXXXXXXXXXXKRMLRMHYYPNANT 215
N AL++F ++ ++ + + + R++ + T
Sbjct: 376 TENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKT 435
Query: 216 FHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNML 275
+ ++ +++A ++ +M I S + +++ + ++ +D A + + +
Sbjct: 436 YLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALS 495
Query: 276 HTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQ 335
TG P+ + ++ Y N A + D+ L+ + + K G
Sbjct: 496 KTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVA 554
Query: 336 DALGVFRSLSKQ-NIQPDPYTLT--------------------SWLSMICQSRMFDL-LP 373
+A + + ++ ++ + + T S L ++ M +L L
Sbjct: 555 EAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLK 614
Query: 374 EPALVFRYIDPDLVF--------CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
E L +L+F N ++S V+ G S A D++I LG ++ + A
Sbjct: 615 EGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIA 674
Query: 426 VLLSALCAAGKIYEAVKVY------------------------------RGGVMSSQETD 455
L++ K+ EA ++Y G M S E
Sbjct: 675 TLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKG 734
Query: 456 ARIHTVIIVELIKA----GKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDAC 511
V I L+ A GK+ A + + + + LD V Y I A+L +G+ A
Sbjct: 735 CDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCAS 794
Query: 512 TFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFP 571
Y++M +G+ + T N M+ + + L K ++ S + L ++ + N+
Sbjct: 795 EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHY 854
Query: 572 CRSDAYYSTSNLLAEMREMGLLPA 595
+ +L +EM++ G+ P
Sbjct: 855 GKGGKMSEALSLFSEMQKKGIKPG 878
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 281 PNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGV 340
P+VV YT +++ Y + ++ A F M G PD V ++ +++ GRH L
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 341 FRSLSKQNIQPDP----YTLTSWLSMICQSRMFDLLPEPALVFRYIDPDLVFCNALLSYL 396
++++ ++ I + L+S ++ DL E +V + P+ ++S
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLE--MVEEGVPPNEFTYTLVVSSY 303
Query: 397 VKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRG----GVMSSQ 452
K G +A + + M LGF P++ +++ ++S AG +A+ +Y G++ S
Sbjct: 304 AKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Query: 453 ETDARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACT 512
T A + ++ K Y A ++F K P D V + I + G DA +
Sbjct: 364 YTCATMLSL----YYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQS 419
Query: 513 FYDQMKENGLKPNAHT 528
+++ + L + T
Sbjct: 420 MFEETERLNLLADEKT 435
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 166/409 (40%), Gaps = 71/409 (17%)
Query: 213 ANTFHSLLNAFFKMDALLEAYQL----LGLMV--------------VLGIQFSVNVWTIL 254
A + H ++N K +A+L QL LGLM+ +L + F ++ +
Sbjct: 579 AESMH-IVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSA 637
Query: 255 IHK----HCQLGILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMR 310
+++ + G + A + ++ G T TLI Y +++ +A L+
Sbjct: 638 VNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---L 694
Query: 311 SAGH--TPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYT---LTSWLSMICQ 365
+AG TP + +ID + + G +DA G+F +++ P T L + L+ +
Sbjct: 695 AAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGK 754
Query: 366 SRMFDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFA 425
R + + L + I+ D V N L+ +++AG A+E Y+ M G ++
Sbjct: 755 HREAEHISRTCLE-KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 426 VLLSALCAAGKIYEAVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQAVVR 485
++S ++ +A++++ S D +I+T +I+ K GK
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK-------------- 859
Query: 486 KYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKDLQKV 545
+A + + +M++ G+KP + NMM+ + +V
Sbjct: 860 ---------------------MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEV 898
Query: 546 NQMLKEMI--GSRIELSDRNFLNLCNFPCRSDAYYSTSNLLAEMREMGL 592
+++L+ M G +LS +L L S + + ++E G+
Sbjct: 899 DELLQAMERNGRCTDLS--TYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 230 LEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVVTYTTL 289
LE + + VV + SV + L+ C+ G LD A + +M NV +T++
Sbjct: 164 LEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMR----DKNVKCWTSM 219
Query: 290 IKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHSKAGRHQDALGVFRSLSKQNI 349
+ Y+ + R+ +A LF RS D+VLW +++ + + R +AL +FR + I
Sbjct: 220 VFGYVSTGRIDEARVLFE--RSP--VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 350 QPDPYTLTSWLSMICQSRMFDLLPEPALVFRYIDP-----DLVFCNALLSYLVKAGHPSD 404
+PD + L S L+ Q+ L + + YI+ D V AL+ K G
Sbjct: 276 RPDNFVLVSLLTGCAQT---GALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 405 AAE-FYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVY 444
A E FY++ D S+ L+ L G A+ +Y
Sbjct: 333 ALEVFYEIK-----ERDTASWTSLIYGLAMNGMSGRALDLY 368
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 188/504 (37%), Gaps = 117/504 (23%)
Query: 105 CILTKNPNSFLLLLRILWRAGMHAMFFQAYHQMQSYGFVPNTFARNLFMDAHFRIGNLHL 164
C + + SF ++++ AG + FQA ++ GF + + RN+ MD + + ++
Sbjct: 100 CGIMPDAFSFPVVIK---SAGRFGILFQAL--VEKLGFFKDPYVRNVIMDMYVKHESVES 154
Query: 165 ALTVFQQIQPPNFFTFDITLFHLSNXXXXXXXXXXXXKRMLRMHYYPNANTFHSLLNAFF 224
A VF QI + ++ +++ ++
Sbjct: 155 ARKVFDQISQRK------------------------------------GSDWNVMISGYW 178
Query: 225 KMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLLQNMLHTGCSPNVV 284
K EA +L +M + V WT++I ++ L+ A K M +VV
Sbjct: 179 KWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPE----KSVV 230
Query: 285 TYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLI------------------- 325
++ ++ Y ++ DA LFN M G P+ W ++I
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 326 ----------------DCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRM 368
D H+K Q A +F L Q L +W +MI +R+
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR------NLVTWNAMISGYTRI 344
Query: 369 FDLLPEPALVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFA-PDKYSFAVL 427
D+ L ++V N+L++ G + A EF++ MI+ G + PD+ + +
Sbjct: 345 GDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT---M 401
Query: 428 LSALCAAGKIYE------AVKVYRGGVMSSQETDARIHTVIIVELIKAGKYLMAATVFKQ 481
+S L A G + + V R + ++ R +I + G A VF +
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR---SLIFMYARGGNLWEAKRVFDE 458
Query: 482 AVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCNMMLFTFYKEKD 541
R D V+Y A +G + +MK+ G++P+ T +L +
Sbjct: 459 MKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG- 513
Query: 542 LQKVNQMLKEMIGSRIELSDRNFL 565
+LKE G RI S RN L
Sbjct: 514 ------LLKE--GQRIFKSIRNPL 529
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 210 YPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANK 269
+PN +S+ F KMD + +L GI + ++I + GIL A
Sbjct: 68 FPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA-- 125
Query: 270 LLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS 329
L++ + G + ++ Y++ V A +F+ + + WNV+I +
Sbjct: 126 LVEKL---GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSD----WNVMISGYW 178
Query: 330 KAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQ-SRMFDLLPEPALVFRYIDPDLVF 388
K G ++A +F + + ++ SW MI +++ DL R + +V
Sbjct: 179 KWGNKEEACKLFDMMPENDV-------VSWTVMITGFAKVKDLENARKYFDRMPEKSVVS 231
Query: 389 CNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSA 430
NA+LS + G DA ++ M+ LG P++ ++ +++SA
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 338 LGVFRSLSKQNIQPDPYTLTSWLSMI--CQSRMFDLLPEPALVFRYID-PDLVFCNALLS 394
L VF SL +Q + W S I C +R+ L+F + P++ N++
Sbjct: 29 LIVFNSLPRQ---------SYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFK 79
Query: 395 YLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQET 454
Y K +D Y+ G PD +SF V++ + G +++A+ V + G
Sbjct: 80 YFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL-VEKLGFFK---- 134
Query: 455 DARIHTVIIVELIKAGKYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFY 514
D + VI+ +K A VF Q RK + V I + G +AC +
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRK----GSDWNVMISGYWKWGNKEEACKLF 190
Query: 515 DQMKENGLKPNAHTCNMMLFTFYKEKDLQKVNQMLKEM 552
D M EN + + +M+ F K KDL+ + M
Sbjct: 191 DMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRM 224
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 110/262 (41%), Gaps = 11/262 (4%)
Query: 202 KRMLRMHYYPNANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQL 261
K+ ++ P ++ + + + L EA ++ ++V ++ LI +
Sbjct: 282 KKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV 341
Query: 262 GILDVANKLLQNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLW 321
D A + L M+ TG P + T + L K ++ + + S G+ +L +
Sbjct: 342 DP-DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSY 400
Query: 322 NVLIDCHSKAGRHQDALGVFRSLSKQNIQPDPYTLTSWLSMICQSRMFDLLPEPA----- 376
+++I KAGR +++ + + K+ + PD + + C++ M PA
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMI----RPAKKLWD 456
Query: 377 -LVFRYIDPDLVFCNALLSYLVKAGHPSDAAEFYDLMIELGFAPDKYSFAVLLSALCAAG 435
+ +L N L+ L + G ++ +D M+E G PD+ + L+ LC
Sbjct: 457 EMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKET 516
Query: 436 KIYEAVKVYRGGVMSSQETDAR 457
KI A++V+R + +T R
Sbjct: 517 KIEAAMEVFRKCMERDHKTVTR 538
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 155/403 (38%), Gaps = 45/403 (11%)
Query: 212 NANTFHSLLNAFFKMDALLEAYQLLGLMVVLGIQFSVNVWTILIHKHCQLGILDVANKLL 271
+++ + SL++ A+ +L G + +V L+ G D A KL
Sbjct: 116 DSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLF 175
Query: 272 QNMLHTGCSPNVVTYTTLIKAYMESNRVTDASNLFNHMRSAGHTPDLVLWNVLIDCHS-- 329
M H G S N + + I + S+ L + ++ A + + +LI HS
Sbjct: 176 VKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLI-LHSLC 234
Query: 330 KAGRHQDALGVFRSLSKQNIQPD---------PYTLTSWL----SMICQSRMFDLLPEPA 376
K R DA + L + +PD + +T L ++ + R + P +
Sbjct: 235 KCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSS 294
Query: 377 LVFRYIDPDLVFC---------------------NALLSYL---VKAGHPSDAAEFYDLM 412
+R DL+ N +L L V A P A EF M
Sbjct: 295 -DYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYM 353
Query: 413 IELGFAPDKYSFAVLLSALCAAGKIYEAVKVYRGGVMSSQE--TDARIHTVIIVELIKAG 470
+ G P + + L LC K +K Y ++SS+ ++ + ++++I L KAG
Sbjct: 354 VSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYE--LLSSKGYFSELQSYSLMISFLCKAG 411
Query: 471 KYLMAATVFKQAVVRKYPLDNVAYAVGICALLRSGRTPDACTFYDQMKENGLKPNAHTCN 530
+ + T ++ D Y I A ++ A +D+M G K N T N
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 531 MMLFTFYKEKDLQKVNQMLKEMIGSRIELSDRNFLNLCNFPCR 573
+++ +E + ++ ++ +M+ IE + +++L C+
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514