Miyakogusa Predicted Gene

Lj5g3v0255610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0255610.1 tr|Q015K9|Q015K9_OSTTA Complex 1 family protein /
LVR family protein (ISS) OS=Ostreococcus tauri
GN=,41.8,2e-16,seg,NULL; Complex1_LYR,Complex 1 LYR
protein,CUFF.52685.1
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76060.1 | Symbols: EMB1793 | LYR family of Fe/S cluster biog...   178   1e-45

>AT1G76060.1 | Symbols: EMB1793 | LYR family of Fe/S cluster
           biogenesis protein | chr1:28543367-28543840 REVERSE
           LENGTH=157
          Length = 157

 Score =  178 bits (451), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 91/153 (59%), Positives = 111/153 (72%), Gaps = 3/153 (1%)

Query: 1   MRGKVEKWRSIWSQIDGKARQQGC---RLLHEGPDTMEELLDRHLVXXXXXXXXXXXXEL 57
           M  K++KWR++  ++D   R       R LHEGPDT+EELL+RHL             E 
Sbjct: 2   MAAKLQKWRNLAGRLDLMNRSGAVSTRRFLHEGPDTVEELLERHLAKKEKPIIDHDEAEF 61

Query: 58  LNQRRVTSPRRGALSLYRDVLPASRFFTWPDSNGVLWRDVLRESARKEFESARFETDPEV 117
           LN+RR+TS RR ALSLYRD+L A+RFFTW DS G LWRDVLRE+ARKEFE+ARFETDPEV
Sbjct: 62  LNRRRLTSTRREALSLYRDILRATRFFTWIDSRGNLWRDVLRENARKEFEAARFETDPEV 121

Query: 118 VTRLLIGGNEAVQSAVDKLVEKQKQQTLKDRGG 150
           +TRLLIGG++AV SA+DKL EKQ++   K R G
Sbjct: 122 ITRLLIGGSDAVSSALDKLAEKQREMIEKQRRG 154