Miyakogusa Predicted Gene

Lj5g3v0240210.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0240210.3 Non Chatacterized Hit- tr|I1MY43|I1MY43_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.62,0,VACUOLAR
SORTING PROTEIN 35,Vacuolar protein sorting-associated protein 35;
seg,NULL; Vps35,Vacuolar,CUFF.52774.3
         (329 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75850.1 | Symbols: VPS35B | VPS35 homolog B | chr1:28478053-...   541   e-154
AT2G17790.1 | Symbols: VPS35A, ZIP3 | VPS35 homolog A | chr2:773...   480   e-136
AT3G51310.1 | Symbols: VPS35C | VPS35 homolog C | chr3:19044634-...   452   e-127

>AT1G75850.1 | Symbols: VPS35B | VPS35 homolog B |
           chr1:28478053-28483874 REVERSE LENGTH=790
          Length = 790

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/329 (78%), Positives = 291/329 (88%), Gaps = 1/329 (0%)

Query: 1   MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
           MPIVGA+ L VSLLTFTLRVHPD+LDYVDQVLG+CV KLS  PKL+D RA KQVVALLSA
Sbjct: 340 MPIVGAMTLFVSLLTFTLRVHPDRLDYVDQVLGACVVKLSSVPKLEDARAMKQVVALLSA 399

Query: 61  PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
           PL+KY+D+VTALTLSNYPRVMDHLD+ TNKVMAM+IIQSIMK ++CIS ADKVEVLFELI
Sbjct: 400 PLEKYSDIVTALTLSNYPRVMDHLDDGTNKVMAMLIIQSIMKTDSCISTADKVEVLFELI 459

Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
           KGLI DLD T         F EEQNSVARLIHML N +PEEM KIIC V++H+M GGP+R
Sbjct: 460 KGLIKDLDETNAEELDEEDFQEEQNSVARLIHMLDNEEPEEMLKIICVVRRHLMTGGPRR 519

Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
           LPFTVP L+FSA+RL+RQL+ Q GD+ GE+   TP+KIFQ+LN+ IE L+SV  PELALR
Sbjct: 520 LPFTVPPLVFSAVRLVRQLESQGGDIAGED-SATPRKIFQILNQTIEVLTSVPCPELALR 578

Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
           LYLQCAEAA+DC+LEPVAYEFFTQAF+LYEEEIADSKAQVTAIHLI+GTLQR+NVFGVEN
Sbjct: 579 LYLQCAEAASDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIVGTLQRINVFGVEN 638

Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACS 329
           RDTLTHKATGYSA+LLKKPDQCRAVYACS
Sbjct: 639 RDTLTHKATGYSARLLKKPDQCRAVYACS 667


>AT2G17790.1 | Symbols: VPS35A, ZIP3 | VPS35 homolog A |
           chr2:7733685-7739344 FORWARD LENGTH=787
          Length = 787

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/329 (69%), Positives = 273/329 (82%)

Query: 1   MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
           MPI+ A+ L+ SLL FTL VHPD+LDY DQVLGSCVK+LSGK K+DD RATK++V+LLSA
Sbjct: 339 MPILSAVTLYSSLLKFTLHVHPDRLDYADQVLGSCVKQLSGKGKIDDTRATKELVSLLSA 398

Query: 61  PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
           PL+KYNDVVTAL L+NYP V+++LD ET ++MA VI++SIMKNNT I+ A+KVE LFELI
Sbjct: 399 PLEKYNDVVTALKLTNYPLVVEYLDTETKRIMATVIVRSIMKNNTLITTAEKVEALFELI 458

Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
           KG+I DLD           F EEQNSVA LIHML+N+DPEEMFKI+  +KKH + GGPKR
Sbjct: 459 KGIINDLDEPQGLEVDEDDFQEEQNSVALLIHMLYNDDPEEMFKIVNVLKKHFLTGGPKR 518

Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
           L FT+P L+ S L+LIR+L  +  +  G+E  +T  KIFQ LN+IIEAL +V SP+LA R
Sbjct: 519 LKFTIPPLVVSTLKLIRRLPVEGDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFR 578

Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
           LYLQCAEAA+ C+ EP+AYEFFTQA++LYEEEI+DSKAQVTA+ LIIGTLQRM VFGVEN
Sbjct: 579 LYLQCAEAADKCDEEPIAYEFFTQAYILYEEEISDSKAQVTALQLIIGTLQRMQVFGVEN 638

Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACS 329
           RDTLTHKATGY+AKLLKKPDQCRAVYACS
Sbjct: 639 RDTLTHKATGYAAKLLKKPDQCRAVYACS 667


>AT3G51310.1 | Symbols: VPS35C | VPS35 homolog C |
           chr3:19044634-19049321 REVERSE LENGTH=790
          Length = 790

 Score =  452 bits (1163), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 214/329 (65%), Positives = 268/329 (81%)

Query: 1   MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
           +P   ++ L++ LL FTL V+ D+LDYVDQVLGSCV +LS   KL D++A KQ+VA LSA
Sbjct: 336 LPAAASVTLYLFLLKFTLHVYSDRLDYVDQVLGSCVTQLSATGKLCDDKAAKQIVAFLSA 395

Query: 61  PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
           PL+KYN+VVT L L+NYP VM++LD ETNK MA++++QS+ KNNT I+ AD+V+ LFEL 
Sbjct: 396 PLEKYNNVVTILKLTNYPLVMEYLDRETNKAMAIILVQSVFKNNTHIATADEVDALFELA 455

Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
           KGL+ D DGT         F EEQN VARL++ L+ +DPEEM KII TV+KHI+ GGPKR
Sbjct: 456 KGLMKDFDGTIDDEIDEEDFQEEQNLVARLVNKLYIDDPEEMSKIIFTVRKHIVAGGPKR 515

Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
           LP T+P L+FSAL+LIR+L+G D +  G++   TPK+I QLL+E +E LS VS+P+LALR
Sbjct: 516 LPLTIPPLVFSALKLIRRLRGGDENPFGDDASATPKRILQLLSETVEVLSDVSAPDLALR 575

Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
           LYLQCA+AAN+CELE VAYEFFT+A++LYEEEI+DSKAQVTA+ LIIGTLQRM VF VEN
Sbjct: 576 LYLQCAQAANNCELETVAYEFFTKAYLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVEN 635

Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACS 329
           RDTLTHKATGYSA+LL+KPDQCRAVY C+
Sbjct: 636 RDTLTHKATGYSARLLRKPDQCRAVYECA 664