Miyakogusa Predicted Gene

Lj5g3v0240210.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0240210.1 Non Chatacterized Hit- tr|I1MY43|I1MY43_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.14,0,Vps35,Vacuolar protein sorting-associated protein 35;
seg,NULL; VACUOLAR SORTING PROTEIN 35,Vacuolar,CUFF.52774.1
         (452 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75850.1 | Symbols: VPS35B | VPS35 homolog B | chr1:28478053-...   743   0.0  
AT2G17790.1 | Symbols: VPS35A, ZIP3 | VPS35 homolog A | chr2:773...   641   0.0  
AT3G51310.1 | Symbols: VPS35C | VPS35 homolog C | chr3:19044634-...   588   e-168

>AT1G75850.1 | Symbols: VPS35B | VPS35 homolog B |
           chr1:28478053-28483874 REVERSE LENGTH=790
          Length = 790

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/452 (78%), Positives = 397/452 (87%), Gaps = 1/452 (0%)

Query: 1   MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
           MPIVGA+ L VSLLTFTLRVHPD+LDYVDQVLG+CV KLS  PKL+D RA KQVVALLSA
Sbjct: 340 MPIVGAMTLFVSLLTFTLRVHPDRLDYVDQVLGACVVKLSSVPKLEDARAMKQVVALLSA 399

Query: 61  PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
           PL+KY+D+VTALTLSNYPRVMDHLD+ TNKVMAM+IIQSIMK ++CIS ADKVEVLFELI
Sbjct: 400 PLEKYSDIVTALTLSNYPRVMDHLDDGTNKVMAMLIIQSIMKTDSCISTADKVEVLFELI 459

Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
           KGLI DLD T         F EEQNSVARLIHML N +PEEM KIIC V++H+M GGP+R
Sbjct: 460 KGLIKDLDETNAEELDEEDFQEEQNSVARLIHMLDNEEPEEMLKIICVVRRHLMTGGPRR 519

Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
           LPFTVP L+FSA+RL+RQL+ Q GD+ GE+   TP+KIFQ+LN+ IE L+SV  PELALR
Sbjct: 520 LPFTVPPLVFSAVRLVRQLESQGGDIAGEDSA-TPRKIFQILNQTIEVLTSVPCPELALR 578

Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
           LYLQCAEAA+DC+LEPVAYEFFTQAF+LYEEEIADSKAQVTAIHLI+GTLQR+NVFGVEN
Sbjct: 579 LYLQCAEAASDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIVGTLQRINVFGVEN 638

Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAA 360
           RDTLTHKATGYSA+LLKKPDQCRAVYACSHLFWVDD DGIKDGERVLLCL+RALRIANAA
Sbjct: 639 RDTLTHKATGYSARLLKKPDQCRAVYACSHLFWVDDPDGIKDGERVLLCLRRALRIANAA 698

Query: 361 QQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSANIQGLIELITSEMQSDTASALP 420
           QQMA+  RGSSGPVTLFVEILNKYIY+FEKGNP IT ++IQ LIELI +EMQSD  +   
Sbjct: 699 QQMASATRGSSGPVTLFVEILNKYIYFFEKGNPHITPSDIQSLIELINNEMQSDNGNTTI 758

Query: 421 VSDAFFASTLRYIQFQKQKGGILGEKYDSIKV 452
            SD FF STLRYI+F KQKGG++GEKYD IK+
Sbjct: 759 HSDPFFTSTLRYIKFIKQKGGLMGEKYDPIKL 790


>AT2G17790.1 | Symbols: VPS35A, ZIP3 | VPS35 homolog A |
           chr2:7733685-7739344 FORWARD LENGTH=787
          Length = 787

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/454 (66%), Positives = 377/454 (83%), Gaps = 7/454 (1%)

Query: 1   MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
           MPI+ A+ L+ SLL FTL VHPD+LDY DQVLGSCVK+LSGK K+DD RATK++V+LLSA
Sbjct: 339 MPILSAVTLYSSLLKFTLHVHPDRLDYADQVLGSCVKQLSGKGKIDDTRATKELVSLLSA 398

Query: 61  PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
           PL+KYNDVVTAL L+NYP V+++LD ET ++MA VI++SIMKNNT I+ A+KVE LFELI
Sbjct: 399 PLEKYNDVVTALKLTNYPLVVEYLDTETKRIMATVIVRSIMKNNTLITTAEKVEALFELI 458

Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
           KG+I DLD           F EEQNSVA LIHML+N+DPEEMFKI+  +KKH + GGPKR
Sbjct: 459 KGIINDLDEPQGLEVDEDDFQEEQNSVALLIHMLYNDDPEEMFKIVNVLKKHFLTGGPKR 518

Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
           L FT+P L+ S L+LIR+L  +  +  G+E  +T  KIFQ LN+IIEAL +V SP+LA R
Sbjct: 519 LKFTIPPLVVSTLKLIRRLPVEGDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFR 578

Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
           LYLQCAEAA+ C+ EP+AYEFFTQA++LYEEEI+DSKAQVTA+ LIIGTLQRM VFGVEN
Sbjct: 579 LYLQCAEAADKCDEEPIAYEFFTQAYILYEEEISDSKAQVTALQLIIGTLQRMQVFGVEN 638

Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAA 360
           RDTLTHKATGY+AKLLKKPDQCRAVYACSHLFW++D++ I+DGERVLLCLKRAL+IAN+A
Sbjct: 639 RDTLTHKATGYAAKLLKKPDQCRAVYACSHLFWLEDRETIQDGERVLLCLKRALKIANSA 698

Query: 361 QQMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSANIQGLIELITSE--MQSDTASA 418
           QQ+AN ARGS+G VTLF+EILNKY+Y++EKG PQIT  +++ LI+LI +E  M SD    
Sbjct: 699 QQVANTARGSTGSVTLFIEILNKYLYFYEKGVPQITVESVESLIKLIKNEESMPSD---- 754

Query: 419 LPVSDAFFASTLRYIQFQKQKGGILGEKYDSIKV 452
            P +++FFA+TL +++FQKQK G +GE+Y +IKV
Sbjct: 755 -PSAESFFATTLEFMEFQKQKEGAIGERYQAIKV 787


>AT3G51310.1 | Symbols: VPS35C | VPS35 homolog C |
           chr3:19044634-19049321 REVERSE LENGTH=790
          Length = 790

 Score =  588 bits (1515), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/455 (62%), Positives = 360/455 (79%), Gaps = 7/455 (1%)

Query: 1   MPIVGAIALHVSLLTFTLRVHPDQLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSA 60
           +P   ++ L++ LL FTL V+ D+LDYVDQVLGSCV +LS   KL D++A KQ+VA LSA
Sbjct: 336 LPAAASVTLYLFLLKFTLHVYSDRLDYVDQVLGSCVTQLSATGKLCDDKAAKQIVAFLSA 395

Query: 61  PLDKYNDVVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTCISNADKVEVLFELI 120
           PL+KYN+VVT L L+NYP VM++LD ETNK MA++++QS+ KNNT I+ AD+V+ LFEL 
Sbjct: 396 PLEKYNNVVTILKLTNYPLVMEYLDRETNKAMAIILVQSVFKNNTHIATADEVDALFELA 455

Query: 121 KGLITDLDGTAXXXXXXXXFNEEQNSVARLIHMLHNNDPEEMFKIICTVKKHIMNGGPKR 180
           KGL+ D DGT         F EEQN VARL++ L+ +DPEEM KII TV+KHI+ GGPKR
Sbjct: 456 KGLMKDFDGTIDDEIDEEDFQEEQNLVARLVNKLYIDDPEEMSKIIFTVRKHIVAGGPKR 515

Query: 181 LPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPLTPKKIFQLLNEIIEALSSVSSPELALR 240
           LP T+P L+FSAL+LIR+L+G D +  G++   TPK+I QLL+E +E LS VS+P+LALR
Sbjct: 516 LPLTIPPLVFSALKLIRRLRGGDENPFGDDASATPKRILQLLSETVEVLSDVSAPDLALR 575

Query: 241 LYLQCAEAANDCELEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVEN 300
           LYLQCA+AAN+CELE VAYEFFT+A++LYEEEI+DSKAQVTA+ LIIGTLQRM VF VEN
Sbjct: 576 LYLQCAQAANNCELETVAYEFFTKAYLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVEN 635

Query: 301 RDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAA 360
           RDTLTHKATGYSA+LL+KPDQCRAVY C+HLFW D+ + +KDGERV+LCLKRA RIA+A 
Sbjct: 636 RDTLTHKATGYSARLLRKPDQCRAVYECAHLFWADECENLKDGERVVLCLKRAQRIADAV 695

Query: 361 QQMANVARG--SSGPVTLFVEILNKYIYYFEKGNPQITSANIQGLIELITSEMQSDTASA 418
           QQMAN +RG  S+G V+L+VE+LNKY+Y+ EKGN Q+T   I+ L ELI SE +   + A
Sbjct: 696 QQMANASRGTSSTGSVSLYVELLNKYLYFLEKGNQQVTGDTIKSLAELIKSETKKVESGA 755

Query: 419 LPVSDAFFASTLRYIQFQKQK-GGILGEKYDSIKV 452
            P    F  STLRYI+FQ+Q+  G + EKY+ IK+
Sbjct: 756 EP----FINSTLRYIEFQRQQEDGGMNEKYEKIKM 786