Miyakogusa Predicted Gene

Lj5g3v0228130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0228130.1 Non Chatacterized Hit- tr|G7I7P5|G7I7P5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.35,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; DUF3475,Protein of unknown functi,CUFF.52649.1
         (252 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30755.1 | Symbols:  | Protein of unknown function (DUF668) |...   182   2e-46
AT1G34320.1 | Symbols:  | Protein of unknown function (DUF668) |...   167   8e-42
AT5G08660.1 | Symbols:  | Protein of unknown function (DUF668) |...   142   2e-34
AT3G23160.1 | Symbols:  | Protein of unknown function (DUF668) |...    60   1e-09
AT5G04550.1 | Symbols:  | Protein of unknown function (DUF668) |...    59   4e-09

>AT1G30755.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr1:10905991-10908773 REVERSE LENGTH=615
          Length = 615

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/258 (44%), Positives = 156/258 (60%), Gaps = 20/258 (7%)

Query: 1   MGSVCSA------GKAEINKNGG-KTLGCGGKLEKLKSFVKKSGGCYSNSKTSDRGKMEK 53
           MG VCS        K ++  N   K+ G  GKL+ ++   K S   YS++    R K  K
Sbjct: 1   MGGVCSCVFKDDDKKKKLRSNDDDKSRGFSGKLKSMRR-SKTSDSYYSDNYGGSRRKSSK 59

Query: 54  KRNSTF--SGEFKISNPSEMGRKQVSQRSSFLGRAG----ERAVEVLDTLGSSMPKLNTS 107
                F  SGE     P      +  QR+SF+GRAG    E+AVEVLDTLGSSM ++N S
Sbjct: 60  PDEVVFNFSGELGPMPPLRNDSTKFMQRNSFMGRAGVMGLEKAVEVLDTLGSSMTRMNPS 119

Query: 108 NGFSSSMVAPRGNKISILAFEVANTISRGEILFQSLSEEDIQSLEKEIEESEGVQNLVST 167
           N + S + + RG K++ILAFEVANTI++G  L QSLSEE+++ ++K++  SE V+ LVST
Sbjct: 120 NAYLSGVTSSRGGKVTILAFEVANTIAKGAALLQSLSEENLKFMKKDMLHSEEVKKLVST 179

Query: 168 DKKELISFLEADKRKEFNSFSREVARFGNSCKDPQWHHLDRYFSRLDLDVLTNTQPRV-- 225
           D  EL     +DKR+E + FS EV RFGN CKD QWH+LDRYF +LD +   N+Q ++  
Sbjct: 180 DTTELQILAASDKREELDLFSGEVIRFGNMCKDLQWHNLDRYFMKLDTE---NSQHKLLK 236

Query: 226 -EVEKTMQELTALAHDTA 242
            + E  MQEL  LA  T+
Sbjct: 237 DDAEARMQELVTLARITS 254


>AT1G34320.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr1:12520713-12524046 FORWARD LENGTH=657
          Length = 657

 Score =  167 bits (422), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/181 (50%), Positives = 117/181 (64%), Gaps = 5/181 (2%)

Query: 75  QVSQRSSFLGRAGE----RAVEVLDTLGSSMPKLNTSNGFSSSMVAPRGNKISILAFEVA 130
           +VS+ SS LGRAG     +AV+VLDTLGSSM  LN S GFSS+    +GNKISIL+FEVA
Sbjct: 105 KVSEVSSLLGRAGTMGLGKAVDVLDTLGSSMTNLNLSGGFSSATTV-KGNKISILSFEVA 163

Query: 131 NTISRGEILFQSLSEEDIQSLEKEIEESEGVQNLVSTDKKELISFLEADKRKEFNSFSRE 190
           NTI +G  L  SLS++ I  L++ +  SEGVQNL+S D  EL+    ADKR+E   FS E
Sbjct: 164 NTIVKGANLMHSLSKDSITHLKEVVLPSEGVQNLISKDMDELLRIAAADKREELRIFSGE 223

Query: 191 VARFGNSCKDPQWHHLDRYFSRLDLDVLTNTQPRVEVEKTMQELTALAHDTAGKALQLFG 250
           V RFGN CKDPQ+H+LDR+F RL  +       + E E  M ++ +  H TA    +L  
Sbjct: 224 VVRFGNRCKDPQYHNLDRFFDRLGSEFTPQKHLKQEAETIMHQMMSFVHFTADLYHELHA 283

Query: 251 V 251
           +
Sbjct: 284 L 284


>AT5G08660.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:2814526-2817845 FORWARD LENGTH=649
          Length = 649

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 110/169 (65%), Gaps = 3/169 (1%)

Query: 75  QVSQRSSFLGRAGE-RAVEVLDTLGSSMPKLNTSNGFSSSMVAPRGNKISILAFEVANTI 133
           +V++ S  LG+AG  RA +VLDTLGSSM  L +S GF+S  VA +GN++ ILAFEVANTI
Sbjct: 103 KVTEASKLLGKAGLGRAKDVLDTLGSSMTDL-SSGGFTSG-VATKGNELGILAFEVANTI 160

Query: 134 SRGEILFQSLSEEDIQSLEKEIEESEGVQNLVSTDKKELISFLEADKRKEFNSFSREVAR 193
            +   L +SLS+ +I+ L+  I  SEGVQNLVS D  EL+  + ADKR+E   FS EV R
Sbjct: 161 VKSSNLIESLSKRNIEHLKGTILYSEGVQNLVSNDFDELLRLVAADKRQELQVFSGEVVR 220

Query: 194 FGNSCKDPQWHHLDRYFSRLDLDVLTNTQPRVEVEKTMQELTALAHDTA 242
           FGN  KD QWH+L RYF R+  ++    Q + +    + +L  L   TA
Sbjct: 221 FGNRSKDFQWHNLQRYFDRISKELTPQRQLKEDAVLVVDQLMVLVQYTA 269


>AT3G23160.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr3:8260059-8261654 REVERSE LENGTH=531
          Length = 531

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 50/80 (62%)

Query: 122 ISILAFEVANTISRGEILFQSLSEEDIQSLEKEIEESEGVQNLVSTDKKELISFLEADKR 181
           I IL+FEVAN +S+   L +SLS+ +I  L+ E+  SEGV+ LVS+D+  L+    ++K 
Sbjct: 43  IGILSFEVANVMSKTIHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEKL 102

Query: 182 KEFNSFSREVARFGNSCKDP 201
            + +  +  V+R G  C +P
Sbjct: 103 DDLSRVASVVSRLGKKCNEP 122


>AT5G04550.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:1303757-1305556 REVERSE LENGTH=599
          Length = 599

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 48/81 (59%)

Query: 122 ISILAFEVANTISRGEILFQSLSEEDIQSLEKEIEESEGVQNLVSTDKKELISFLEADKR 181
           + +LAFEVA+ +S+   L+QSLS++++  L  EI  S G++ LVS D   ++  +  +  
Sbjct: 26  LGVLAFEVASLLSKLVHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEMM 85

Query: 182 KEFNSFSREVARFGNSCKDPQ 202
           +   + ++ VAR    C DP+
Sbjct: 86  ENVENVAKAVARLARKCNDPK 106