Miyakogusa Predicted Gene

Lj5g3v0198050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0198050.1 tr|F4I0N7|F4I0N7_ARATH Gibberellin-regulated
protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=4
SV=1,60.53,4e-19,GASA,Gibberellin regulated protein;
seg,NULL,CUFF.52641.1
         (108 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75750.1 | Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28...   101   1e-22
AT1G75750.2 | Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28...   101   1e-22
AT2G18420.1 | Symbols:  | Gibberellin-regulated family protein |...    96   4e-21
AT4G09600.1 | Symbols: GASA3 | GAST1 protein homolog 3 | chr4:60...    82   7e-17
AT5G14920.1 | Symbols:  | Gibberellin-regulated family protein |...    76   4e-15
AT1G22690.3 | Symbols:  | Gibberellin-regulated family protein |...    74   3e-14
AT1G22690.2 | Symbols:  | Gibberellin-regulated family protein |...    74   3e-14
AT1G22690.1 | Symbols:  | Gibberellin-regulated family protein |...    74   3e-14
AT2G39540.1 | Symbols:  | Gibberellin-regulated family protein |...    65   8e-12
AT5G59845.1 | Symbols:  | Gibberellin-regulated family protein |...    63   3e-11
AT2G14900.1 | Symbols:  | Gibberellin-regulated family protein |...    62   8e-11
AT4G09610.1 | Symbols: GASA2 | GAST1 protein homolog 2 | chr4:60...    60   2e-10
AT5G15230.1 | Symbols: GASA4 | GAST1 protein homolog 4 | chr5:49...    60   2e-10
AT1G10588.1 | Symbols:  | Gibberellin-regulated family protein |...    60   3e-10
AT1G10588.2 | Symbols:  | Gibberellin-regulated family protein |...    60   3e-10
AT5G15230.2 | Symbols: GASA4 | GAST1 protein homolog 4 | chr5:49...    54   2e-08
AT1G74670.1 | Symbols:  | Gibberellin-regulated family protein |...    53   3e-08
AT2G30810.1 | Symbols:  | Gibberellin-regulated family protein |...    50   2e-07
AT3G10185.1 | Symbols:  | Gibberellin-regulated family protein |...    46   4e-06

>AT1G75750.1 | Symbols: GASA1 | GAST1 protein homolog 1 |
           chr1:28441813-28442284 REVERSE LENGTH=98
          Length = 98

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 53/61 (86%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           +DCGSAC  RC+LS RP LC RACGTCC RCNCVP GTYG+Y++C CYA++TTHGGRRKC
Sbjct: 38  IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKC 97

Query: 108 P 108
           P
Sbjct: 98  P 98


>AT1G75750.2 | Symbols: GASA1 | GAST1 protein homolog 1 |
           chr1:28441813-28442284 REVERSE LENGTH=97
          Length = 97

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 53/61 (86%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           +DCGSAC  RC+LS RP LC RACGTCC RCNCVP GTYG+Y++C CYA++TTHGGRRKC
Sbjct: 37  IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKC 96

Query: 108 P 108
           P
Sbjct: 97  P 97


>AT2G18420.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:7993861-7994334 FORWARD LENGTH=94
          Length = 94

 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 50/61 (81%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           +DC S C ERC LSSRPNLC RACGTCC RCNCV  GT G+Y++C CY ++TTHGGRRKC
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKC 93

Query: 108 P 108
           P
Sbjct: 94  P 94


>AT4G09600.1 | Symbols: GASA3 | GAST1 protein homolog 3 |
           chr4:6073014-6073516 REVERSE LENGTH=99
          Length = 99

 Score = 82.0 bits (201), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 45/61 (73%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           +DCG  C  RC  SSRPNLC RAC +CC RCNCVP GT G++  C CYA++TT GGR KC
Sbjct: 39  IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 98

Query: 108 P 108
           P
Sbjct: 99  P 99


>AT5G14920.1 | Symbols:  | Gibberellin-regulated family protein |
           chr5:4826598-4827761 FORWARD LENGTH=275
          Length = 275

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEEC-ACYANMTTHGGRRK 106
           +DC   C  RC   SR N+C RAC TCC RC CVP GTYG+ E+C +CYANM T GG+ K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 107 CP 108
           CP
Sbjct: 274 CP 275


>AT1G22690.3 | Symbols:  | Gibberellin-regulated family protein |
           chr1:8027328-8027961 FORWARD LENGTH=119
          Length = 119

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           ++CG AC  RC  +SR  +C RACG+CC +C CVP GT G+   C CYA++ THG + KC
Sbjct: 59  INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 118

Query: 108 P 108
           P
Sbjct: 119 P 119


>AT1G22690.2 | Symbols:  | Gibberellin-regulated family protein |
           chr1:8027328-8027961 FORWARD LENGTH=119
          Length = 119

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           ++CG AC  RC  +SR  +C RACG+CC +C CVP GT G+   C CYA++ THG + KC
Sbjct: 59  INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 118

Query: 108 P 108
           P
Sbjct: 119 P 119


>AT1G22690.1 | Symbols:  | Gibberellin-regulated family protein |
           chr1:8027328-8027961 FORWARD LENGTH=119
          Length = 119

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           ++CG AC  RC  +SR  +C RACG+CC +C CVP GT G+   C CYA++ THG + KC
Sbjct: 59  INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 118

Query: 108 P 108
           P
Sbjct: 119 P 119


>AT2G39540.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:16500866-16501241 FORWARD LENGTH=87
          Length = 87

 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%)

Query: 50  CGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
           CG  C+ RC  + +   C + C  CC++CNCVPSGT+GH +EC CY +M    G  KCP
Sbjct: 29  CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87


>AT5G59845.1 | Symbols:  | Gibberellin-regulated family protein |
           chr5:24111443-24111808 FORWARD LENGTH=89
          Length = 89

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 50  CGSACDERCKLSSRPNLCKRACGTCCERCN-CVPSGTYGHYEECACYANMTTHGGRRKCP 108
           CG  C+ RC  + R + C + C  CCE+CN CVPSGTYG+ +EC CY +M    G  KCP
Sbjct: 30  CGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89


>AT2G14900.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:6404210-6405043 FORWARD LENGTH=108
          Length = 108

 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%)

Query: 50  CGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
           CG  C+ RCK +   + C + CG CC+ C CVPSGTYG+  ECACY +  +  G  KCP
Sbjct: 50  CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108


>AT4G09610.1 | Symbols: GASA2 | GAST1 protein homolog 2 |
           chr4:6074927-6075573 REVERSE LENGTH=99
          Length = 99

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 44/61 (72%)

Query: 48  MDCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKC 107
           +DCG  C +RC  SSR  LC RAC +CC RCNCVP GT G+   C CYA++TTHGGR KC
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 98

Query: 108 P 108
           P
Sbjct: 99  P 99


>AT5G15230.1 | Symbols: GASA4 | GAST1 protein homolog 4 |
           chr5:4945017-4946025 FORWARD LENGTH=106
          Length = 106

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%)

Query: 3   ISKTLFAPILISLILLHLVESNARMGNTMVEXXXXXXXXXXXXXIMDCGSACDERCKLSS 62
           ++K+  A  L++LI+L ++++     +                    C S CD RCK + 
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQ 60

Query: 63  RPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
               C   C  CC +C CVP G YG+ + C+CY N  T  G  KCP
Sbjct: 61  YHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106


>AT1G10588.1 | Symbols:  | Gibberellin-regulated family protein |
           chr1:3501276-3501655 FORWARD LENGTH=90
          Length = 90

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 50  CGSACDERCKLSSRPNL-CKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
           CG  C  RC  + R +  C   C  CC++CNCVPSGTYG+ +EC CY +M    G  KCP
Sbjct: 31  CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90


>AT1G10588.2 | Symbols:  | Gibberellin-regulated family protein |
           chr1:3501276-3501655 FORWARD LENGTH=89
          Length = 89

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 50  CGSACDERCKLSSRPNL-CKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
           CG  C  RC  + R +  C   C  CC++CNCVPSGTYG+ +EC CY +M    G  KCP
Sbjct: 30  CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89


>AT5G15230.2 | Symbols: GASA4 | GAST1 protein homolog 4 |
           chr5:4945286-4946025 FORWARD LENGTH=83
          Length = 83

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 32/60 (53%)

Query: 49  DCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
            C S CD RCK +     C   C  CC +C CVP G YG+ + C+CY N  T  G  KCP
Sbjct: 24  QCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 83


>AT1G74670.1 | Symbols:  | Gibberellin-regulated family protein |
           chr1:28053378-28053893 FORWARD LENGTH=101
          Length = 101

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 30/60 (50%)

Query: 49  DCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
            CG  C  RC  +     C   C  CC +C CVP GTYG+ + C CY N  T  G  KCP
Sbjct: 42  QCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101


>AT2G30810.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:13127945-13128630 REVERSE LENGTH=106
          Length = 106

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 36/60 (60%)

Query: 49  DCGSACDERCKLSSRPNLCKRACGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
           +C  AC+ RC  +S    C   C  CC +C CVPSGTYGH EEC CY N TT  G  KCP
Sbjct: 47  ECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106


>AT3G10185.1 | Symbols:  | Gibberellin-regulated family protein |
           chr3:3145579-3146199 FORWARD LENGTH=103
          Length = 103

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 11  ILISLILLHLVESNARMGNTMVEXXXXXXXXXXXXXIMDCGSACDERCKLSSRPNLCKRA 70
           I+ S+++LHL+ S A M + ++              +++CG  C +RC  +     C   
Sbjct: 8   IVFSIVVLHLLLS-AHM-HFLINVCAECETKSAIPPLLECGPRCGDRCSNTQYKKPCLFF 65

Query: 71  CGTCCERCNCVPSGTYGHYEECACYANMTTHGGRRKCP 108
           C  CC +C CVP GTYG+ + C CY N  T  G  KCP
Sbjct: 66  CNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103