Miyakogusa Predicted Gene
- Lj5g3v0196830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0196830.1 Non Chatacterized Hit- tr|B9S1E4|B9S1E4_RICCO
Auxin response factor, putative OS=Ricinus communis
GN,87.5,0,seg,NULL; AUX_IAA,AUX/IAA protein; CAD & PB1 domains,NULL;
FAMILY NOT NAMED,NULL; IAA_ARF,Aux/IAA-AR,TC76192.path2.1
(160 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 194 2e-50
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 194 2e-50
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 189 5e-49
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 187 3e-48
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 139 6e-34
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 135 9e-33
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 135 1e-32
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 128 2e-30
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 99 1e-21
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 87 6e-18
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 87 6e-18
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 87 6e-18
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 87 6e-18
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 86 8e-18
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 86 1e-17
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 85 2e-17
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 85 2e-17
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 85 2e-17
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 85 2e-17
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 84 4e-17
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 81 2e-16
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 81 3e-16
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 81 3e-16
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 77 5e-15
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 77 5e-15
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 77 7e-15
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 76 9e-15
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 75 3e-14
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 73 1e-13
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 72 2e-13
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 69 1e-12
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 63 9e-11
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 3e-08
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 3e-08
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 3e-08
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 54 5e-08
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 52 2e-07
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 51 3e-07
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 51 3e-07
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 4e-07
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 50 5e-07
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 50 5e-07
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 6e-07
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 7e-07
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 49 2e-06
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 194 bits (493), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 9/158 (5%)
Query: 3 SQTFGVPDMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRS 62
+Q+FGVP++ S D ++D+ L G W QRMRTYTKV KRG+VGRS
Sbjct: 1001 TQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQT---------QRMRTYTKVQKRGSVGRS 1051
Query: 63 IDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCV 122
ID+ RY GY+EL+ DLAR FGIEGQLED Q WKLVYVDHE D+LLVGDDPWEEFVNCV
Sbjct: 1052 IDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCV 1111
Query: 123 RCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 160
+ IKILS EVQQMSLDG+F + NQACS D GN
Sbjct: 1112 QSIKILSSAEVQQMSLDGNFAGVPVTNQACSGGDSGNA 1149
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 194 bits (493), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 9/158 (5%)
Query: 3 SQTFGVPDMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRS 62
+Q+FGVP++ S D ++D+ L G W QRMRTYTKV KRG+VGRS
Sbjct: 1002 TQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQT---------QRMRTYTKVQKRGSVGRS 1052
Query: 63 IDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCV 122
ID+ RY GY+EL+ DLAR FGIEGQLED Q WKLVYVDHE D+LLVGDDPWEEFVNCV
Sbjct: 1053 IDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCV 1112
Query: 123 RCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 160
+ IKILS EVQQMSLDG+F + NQACS D GN
Sbjct: 1113 QSIKILSSAEVQQMSLDGNFAGVPVTNQACSGGDSGNA 1150
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 189 bits (481), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 111/157 (70%), Gaps = 9/157 (5%)
Query: 3 SQTFGVPDMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRS 62
+Q+FGVP++ S D ++D+ L G W QRMRTYTKV KRG+VGRS
Sbjct: 1002 TQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQT---------QRMRTYTKVQKRGSVGRS 1052
Query: 63 IDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCV 122
ID+ RY GY+EL+ DLAR FGIEGQLED Q WKLVYVDHE D+LLVGDDPWEEFVNCV
Sbjct: 1053 IDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCV 1112
Query: 123 RCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGN 159
+ IKILS EVQQMSLDG+F + NQACS + N
Sbjct: 1113 QSIKILSSAEVQQMSLDGNFAGVPVTNQACSGATSFN 1149
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19
| chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 187 bits (475), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 111/162 (68%), Gaps = 14/162 (8%)
Query: 3 SQTFGVPDMTFNSIDST----IDDSSFLNGD-PWGXXXXXXXXXXXFQRMRTYTKVYKRG 57
SQ+FG+P + F S I+DS +NG W QRMRTYTKV KRG
Sbjct: 917 SQSFGIPSIPFKPGCSNEVGGINDSGIMNGGGLWPNQT---------QRMRTYTKVQKRG 967
Query: 58 AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEE 117
+VGRSID+ RYSGY+EL+ DLAR FGIEGQLED WKLVY DHE D+LLVGDDPWEE
Sbjct: 968 SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEE 1027
Query: 118 FVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGN 159
FVNCV+ IKILS EVQQMSLDGD + NQACS +D GN
Sbjct: 1028 FVNCVQNIKILSSVEVQQMSLDGDLAAIPTTNQACSETDSGN 1069
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 139 bits (351), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 74/95 (77%)
Query: 46 RMRTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEG 105
R+RTYTKV K G+VGRSID+ + YEELK + FG+EG L Q GWKLVYVD+E
Sbjct: 791 RVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYES 850
Query: 106 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 140
DVLLVGDDPWEEFV CVRCI+ILSP EVQQMS +G
Sbjct: 851 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 885
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 84/127 (66%), Gaps = 8/127 (6%)
Query: 10 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRSIDIARYS 69
++ + S ID+S FL + T+ KVYK G+ GRS+DI+++S
Sbjct: 766 NLAMTTPSSCIDESGFLQSS--------ENLGSENPQSNTFVKVYKSGSFGRSLDISKFS 817
Query: 70 GYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILS 129
Y EL+ +LAR FG+EGQLED R GW+LV+VD E DVLL+GDDPW EFV+ V CIKILS
Sbjct: 818 SYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILS 877
Query: 130 PQEVQQM 136
PQEVQQM
Sbjct: 878 PQEVQQM 884
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 84/127 (66%), Gaps = 8/127 (6%)
Query: 10 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRGAVGRSIDIARYS 69
++ + S ID+S FL + T+ KVYK G+ GRS+DI+++S
Sbjct: 764 NLAMTTPSSCIDESGFLQSS--------ENLGSENPQSNTFVKVYKSGSFGRSLDISKFS 815
Query: 70 GYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILS 129
Y EL+ +LAR FG+EGQLED R GW+LV+VD E DVLL+GDDPW EFV+ V CIKILS
Sbjct: 816 SYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILS 875
Query: 130 PQEVQQM 136
PQEVQQM
Sbjct: 876 PQEVQQM 882
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 46 RMRTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEG 105
+ + + KVYK G+VGRS+DI+R+S Y EL+++L + F IEG LED R GW+LV+VD E
Sbjct: 703 QTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEN 762
Query: 106 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGL 147
D+LL+GDDPWE FVN V IKILSP++V QM G+ GSGGL
Sbjct: 763 DILLLGDDPWESFVNNVWYIKILSPEDVHQMGDHGE-GSGGL 803
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 46 RMRTYTKVYKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEG 105
+ + + KVYK G+VGRS+DI+R+S Y EL+++L + F IEG LED R GW+LV+VD E
Sbjct: 703 QTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEN 762
Query: 106 DVLLVGDDPWE 116
D+LL+GDDPWE
Sbjct: 763 DILLLGDDPWE 773
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 103
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 534 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 592
Query: 104 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 160
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 593 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 649
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 103
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 539 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 597
Query: 104 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 160
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 598 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 654
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 103
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 539 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 597
Query: 104 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 160
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 598 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 654
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 103
+++R+ TKV+ +G AVGR+ID+ R YE+L + L F I+G+L + + W++VY D
Sbjct: 536 RQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDD 594
Query: 104 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSDGGNT 160
E D+++VGDDPW EF VR I I +P+EV+++S + + GNT
Sbjct: 595 EDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 651
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R TKV+K+G+ VGR+ID++R +GY++L +L R F +EG L D ++ GW+++Y D E D
Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEK-GWRILYTDSEND 723
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLD 139
+++VGDDPW +F N V I + + +EV+ + D
Sbjct: 724 MMVVGDDPWHDFCNVVWKIHLYTKEEVENANDD 756
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 85.9 bits (211), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV +G VGR++D+ GY EL D+ + F I+G+L R + W++V+ D EGD
Sbjct: 521 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQ--WEIVFTDDEGD 578
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW EF N V+ I I S +EV++M+
Sbjct: 579 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 609
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW+EF VR I I + +EV++M+
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW+EF VR I I + +EV++M+
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW+EF VR I I + +EV++M+
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 48 RTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV+K+G A+GRS+D++++ YEEL +L R F G+L ++ W +VY D E D
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEEND 791
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW+EF VR I I + +EV++M+
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 48 RTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGD 106
R+ TKV +G VGR++D+ GY EL D+ + F I+G+L R R W++V+ D EGD
Sbjct: 523 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL--RSRNQWEIVFTDDEGD 580
Query: 107 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
++LVGDDPW EF N V+ I I S +EV++M+
Sbjct: 581 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 10 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRG-AVGRSIDIARY 68
D S+DS I DS+ DP R R KV +G AVGR++D+
Sbjct: 454 DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRI--KVQMQGTAVGRAVDLTLL 511
Query: 69 SGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKIL 128
Y+EL ++L + F IEG+L + + W +V+ D EGD +LVGDDPW EF + + I
Sbjct: 512 RSYDELIKELEKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIY 569
Query: 129 SPQEVQQM---SLDGDFGS 144
EV++M SL GD G+
Sbjct: 570 PSDEVKKMRSKSLLGDKGT 588
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 10 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRG-AVGRSIDIARY 68
D S+DS I DS+ DP R R KV +G AVGR++D+
Sbjct: 367 DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRI--KVQMQGTAVGRAVDLTLL 424
Query: 69 SGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKIL 128
Y+EL ++L + F IEG+L + + W +V+ D EGD +LVGDDPW EF + + I
Sbjct: 425 RSYDELIKELEKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIY 482
Query: 129 SPQEVQQM---SLDGDFGS 144
EV++M SL GD G+
Sbjct: 483 PSDEVKKMRSKSLLGDKGT 501
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 10 DMTFNSIDSTIDDSSFLNGDPWGXXXXXXXXXXXFQRMRTYTKVYKRG-AVGRSIDIARY 68
D S+DS I DS+ DP R R KV +G AVGR++D+
Sbjct: 475 DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRI--KVQMQGTAVGRAVDLTLL 532
Query: 69 SGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKIL 128
Y+EL ++L + F IEG+L + + W +V+ D EGD +LVGDDPW EF + + I
Sbjct: 533 RSYDELIKELEKMFEIEGELSPKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIY 590
Query: 129 SPQEVQQM---SLDGDFGS 144
EV++M SL GD G+
Sbjct: 591 PSDEVKKMRSKSLLGDKGT 609
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 103
Q R+ TKV +G AVGR++D+ Y+EL +L F I+GQL R + W +V+ D
Sbjct: 486 QTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK--WIVVFTDD 543
Query: 104 EGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
EGD++L GDDPW EF + I I S EV++M+
Sbjct: 544 EGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 577
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 44 FQRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 102
F RT TKV +G +GR++D++ +GY++L +L + F ++GQL+ R + W++ + +
Sbjct: 506 FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQ--WEIAFTN 563
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 136
+E D +LVG+DPW EF N V+ I I S +EV+ +
Sbjct: 564 NEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 51 TKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVLL 109
TKV+ +G A+ R++D+ GY +L Q L F ++ +L R R W++V+ ++EG +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL--RTRNQWEIVFTNNEGAEML 493
Query: 110 VGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGLPNQACSSSD 156
VGDDPW EF N + I I S +E+++M L F ++A +SSD
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKFFQPE--SKALTSSD 538
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 44 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 102
F RT TKV +G +GR++D++ +GY++L +L + F I+GQL+ R + WK+ + D
Sbjct: 507 FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ--WKIAFTD 564
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQ 134
+G +LVGDDPW EF V+ I I S +EV+
Sbjct: 565 SDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 44 FQRMRTYTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 102
F RT TKV +G +GR++D++ +GY++L +L + F ++GQL+ R + WK+ + D
Sbjct: 491 FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ--WKIAFTD 548
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQ 134
+G +LVGDDPW EF V+ I I S +EV+
Sbjct: 549 SDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 44 FQRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 102
F RT TKV +G +GR++D++ +GY++L +L + F I+GQL+ R + W++ + D
Sbjct: 507 FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ--WEIAFTD 564
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKI 127
+ D +LVGDDPW EF N V+ I I
Sbjct: 565 SDEDKMLVGDDPWPEFCNMVKKIFI 589
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 44 FQRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 102
F RT TKV +G +GR++D++ +GY++L +L + F ++GQL+ R + WK+++
Sbjct: 512 FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ--WKIIFTG 569
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKI 127
+ D +LVGDDPW EF N V+ I I
Sbjct: 570 SDEDEMLVGDDPWPEFCNMVKRIYI 594
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 44 FQRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 102
F RT TKV +G + R++D++ +GY++L +L F ++GQL+ R + W++ + D
Sbjct: 505 FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQ--WEIAFTD 562
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKIL 128
+ D +LVGDDPW EF N V+ I I
Sbjct: 563 SDDDKMLVGDDPWPEFCNMVKKILIF 588
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 50 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEGDVL 108
+ KVY G +GR +D+ +SGYE L ++L+ F +R R L Y D +GD +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 109 LVGDDPWEEFVNCVRCIKILSPQ 131
+VGD PW+ F+ VR +KI P+
Sbjct: 134 MVGDIPWDMFLETVRRLKITRPE 156
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 58 AVGRSIDIARYSGYEELKQDLARRF--------GIEGQLEDRQRI-----GWKLVYVDHE 104
A+GR +D+ +S YE L Q L F G+ Q R+ + L Y D E
Sbjct: 140 AIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKE 199
Query: 105 GDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
GD +LVGD PW F+N V+ ++++ E ++
Sbjct: 200 GDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 58 AVGRSIDIARYSGYEELKQDLARRF--------GIEGQLEDRQRI-----GWKLVYVDHE 104
A+GR +D+ +S YE L Q L F G+ Q R+ + L Y D E
Sbjct: 139 AIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKE 198
Query: 105 GDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
GD +LVGD PW F+N V+ ++++ E ++
Sbjct: 199 GDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 58 AVGRSIDIARYSGYEELKQDLARRF--------GIEGQLEDRQRI-----GWKLVYVDHE 104
A+GR +D+ +S YE L Q L F G+ Q R+ + L Y D E
Sbjct: 139 AIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKE 198
Query: 105 GDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
GD +LVGD PW F+N V+ ++++ E ++
Sbjct: 199 GDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 50 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLE-DRQRIGWKLVYVDHEGDV 107
Y K+ G +GR ++++ Y+ Y++L + + F + + +RQ + LVY D EGD
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ---YTLVYEDTEGDK 138
Query: 108 LLVGDDPWEEFVNCVRCIKIL 128
+LVGD PWE FV+ V+ + +L
Sbjct: 139 VLVGDVPWEMFVSTVKRLHVL 159
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 16/92 (17%)
Query: 58 AVGRSIDIARYSGYEELKQDL---------ARRFGIEGQLEDRQRIG-------WKLVYV 101
+GR +D+ Y+ YE+L + A+R +GQ E++ IG + L Y
Sbjct: 162 PIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYE 221
Query: 102 DHEGDVLLVGDDPWEEFVNCVRCIKILSPQEV 133
D+EGD +LVGD PW+ FV+ V+ ++++ E+
Sbjct: 222 DNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 59 VGRSIDIARYSGYEELKQDLARRF-GIEGQLEDRQRIG----------WKLVYVDHEGDV 107
+GR +D+ +S YE L Q L F G+ G R+++ + L Y D EGD
Sbjct: 136 IGRKVDMRAHSSYENLAQTLEEMFFGMTGTT-CREKVKPLRLLDGSSDFVLTYEDKEGDW 194
Query: 108 LLVGDDPWEEFVNCVRCIKILSPQEVQQMS 137
+LVGD PW F+N V+ ++I+ E ++
Sbjct: 195 MLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 16/91 (17%)
Query: 59 VGRSIDIARYSGYEEL--------KQDLARRFGIEGQLEDRQRIG--------WKLVYVD 102
+GR +D++ ++ YE+L + LA + +ED + I + L Y D
Sbjct: 161 IGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYED 220
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEV 133
+EGD +LVGD PW+ FV+ V+ ++++ E+
Sbjct: 221 NEGDKMLVGDVPWQMFVSSVKRLRVIKTSEI 251
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 46 RMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDL----------ARRFGIEGQLEDRQRI 94
R + KV G +GR ID+ + YE L L +R +G +E +I
Sbjct: 134 RNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKI 193
Query: 95 ------GWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEV 133
G L Y D EGD +LVGD PW F+ VR ++I+ E
Sbjct: 194 LPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 50 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGI-------EGQLEDRQRIGWKLVYV 101
Y KV G +GR ID+ +GY +L + L F E ++ + L Y
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHV---LTYA 142
Query: 102 DHEGDVLLVGDDPWEEFVNCVRCIKI 127
D EGD ++VGD PWE F++ VR +KI
Sbjct: 143 DKEGDWMMVGDVPWEMFLSTVRRLKI 168
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 50 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGI-------EGQLEDRQRIGWKLVYV 101
Y KV G +GR ID+ +GY +L L F E ++ + L Y
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHV---LTYA 140
Query: 102 DHEGDVLLVGDDPWEEFVNCVRCIKI 127
D EGD ++VGD PWE F++ VR +KI
Sbjct: 141 DKEGDWMMVGDVPWEMFLSSVRRLKI 166
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 46 RMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDL----------ARRFGIEGQLEDRQRI 94
R + KV G +GR ID+ + YE L L +R +G +E +I
Sbjct: 134 RNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKI 193
Query: 95 ------GWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQEV 133
G L Y D EGD +LVGD PW F+ VR ++I+ E
Sbjct: 194 LPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEA 238
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 45 QRMRTYTKVYKRG-AVGRSIDIARYSGYEELKQDL----------ARRFGIEGQLEDRQR 93
R + KV G +GR ID+ + YE L L +R +G +E +
Sbjct: 133 MRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVK 192
Query: 94 I------GWKLVYVDHEGDVLLVGDDPWEEFVNCVRCIKILSPQE 132
I G L Y D EGD +LVGD PW F+ VR ++I+ E
Sbjct: 193 ILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 50 YTKVYKRGA-VGRSIDIARYSGYEELKQDLARRFGIE-GQLEDRQRIGWK-----LVYVD 102
Y KV GA R ID+ Y Y EL + L F G+ +R+ G+K Y D
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFERE--GYKGSDFVPTYED 147
Query: 103 HEGDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGSGGL 147
+GD +LVGD PWE FV+ + ++I+ EV+ + G GGL
Sbjct: 148 KDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL------GCGGL 186