Miyakogusa Predicted Gene

Lj5g3v0186700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0186700.1 CUFF.52635.1
         (599 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75730.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    87   3e-17
AT1G75730.1 | Symbols:  | unknown protein; Has 327 Blast hits to...    87   3e-17

>AT1G75730.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 12 growth stages. |
           chr1:28435991-28438983 REVERSE LENGTH=589
          Length = 589

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 178/406 (43%), Gaps = 77/406 (18%)

Query: 33  CNGVHHAVVPRKIRSAMKKRNRE---SILLDSEKVNHKISGTESTGXXXXXXXXXXQRIN 89
            NGV HA VPRK+RSAMKKRN E    +   S+++N   +GTES+               
Sbjct: 79  TNGVDHASVPRKLRSAMKKRNLESVSKLSSVSKRLNRFKTGTESSVKKESQEMEAKA--- 135

Query: 90  PDWSPRGVSVSGPITKDEEEVAETLFALAGMFHNNGSKHNVEGFEGLQGEPMPENSTVLQ 149
                  V+ S  I+KDE+EVAETL+ LAGMF    S        G +     E S V+ 
Sbjct: 136 ------IVTESMMISKDEKEVAETLYGLAGMFTETDSL-------GKKTSNEKETSKVVD 182

Query: 150 DLKEHANVALEGSATARGPESSLREASRISSINETSGQEQAVVVKRENRNNVALPNSELC 209
            +     + +E   T    ES     S +SS    + Q  A+ +++ ++           
Sbjct: 183 SI-----LVVEDDYTKT--ESLTPVVSVLSSAK--TKQIDAMPLEQSDKQ---------- 223

Query: 210 LAMGLNMT-LQSRISQIERKPDVKFQTATDVDSKQKQGQL-GNEGLTLWPSFSS--VASP 265
                N T +   I ++++   VK    TD  ++  + ++  + GL LWP  SS  V S 
Sbjct: 224 ----FNTTGMVDFIDRLKQSSSVK---VTDAHARVNETKVTTSNGLALWPGLSSTTVHSG 276

Query: 266 SQANHQTIAAKAPDWLEAAICASKHDMIETSTCSSSGKISEVATHKRSWKRCAAHVHISH 325
           +Q   +  + K P W+  A+          S  +S      +    R  KRCA+H++IS 
Sbjct: 277 AQVLSKPSSTKLPPWMGQAVSP--------SNTASLLNCEPLRVQPRKLKRCASHIYISR 328

Query: 326 YIKSLEVPKGQVIKEPEIYECHQMRAHEGSKHGVLLEVHSLNRMRNGVPSATVRNPQESQ 385
            IK L+  K  +         ++ R  E S+  +   V ++N  +     A V  P+  Q
Sbjct: 329 LIKVLQTSKSSLA----TLNQNEQRYSEMSERRLPDSVITINDFK-----AIVSPPKRYQ 379

Query: 386 N--CILQQQCH-----YGDISLAAPTTEVYG--TQKQQSFNFLSLS 422
           N   +   + H       D++  A   E+YG  T ++QSF+FLSLS
Sbjct: 380 NPHLLDMHRAHNPKPVQEDMTKLA--LELYGPHTSQKQSFDFLSLS 423


>AT1G75730.1 | Symbols:  | unknown protein; Has 327 Blast hits to
           272 proteins in 89 species: Archae - 0; Bacteria - 129;
           Metazoa - 68; Fungi - 14; Plants - 20; Viruses - 0;
           Other Eukaryotes - 96 (source: NCBI BLink). |
           chr1:28435991-28438983 REVERSE LENGTH=589
          Length = 589

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 178/406 (43%), Gaps = 77/406 (18%)

Query: 33  CNGVHHAVVPRKIRSAMKKRNRE---SILLDSEKVNHKISGTESTGXXXXXXXXXXQRIN 89
            NGV HA VPRK+RSAMKKRN E    +   S+++N   +GTES+               
Sbjct: 79  TNGVDHASVPRKLRSAMKKRNLESVSKLSSVSKRLNRFKTGTESSVKKESQEMEAKA--- 135

Query: 90  PDWSPRGVSVSGPITKDEEEVAETLFALAGMFHNNGSKHNVEGFEGLQGEPMPENSTVLQ 149
                  V+ S  I+KDE+EVAETL+ LAGMF    S        G +     E S V+ 
Sbjct: 136 ------IVTESMMISKDEKEVAETLYGLAGMFTETDSL-------GKKTSNEKETSKVVD 182

Query: 150 DLKEHANVALEGSATARGPESSLREASRISSINETSGQEQAVVVKRENRNNVALPNSELC 209
            +     + +E   T    ES     S +SS    + Q  A+ +++ ++           
Sbjct: 183 SI-----LVVEDDYTKT--ESLTPVVSVLSSAK--TKQIDAMPLEQSDKQ---------- 223

Query: 210 LAMGLNMT-LQSRISQIERKPDVKFQTATDVDSKQKQGQL-GNEGLTLWPSFSS--VASP 265
                N T +   I ++++   VK    TD  ++  + ++  + GL LWP  SS  V S 
Sbjct: 224 ----FNTTGMVDFIDRLKQSSSVK---VTDAHARVNETKVTTSNGLALWPGLSSTTVHSG 276

Query: 266 SQANHQTIAAKAPDWLEAAICASKHDMIETSTCSSSGKISEVATHKRSWKRCAAHVHISH 325
           +Q   +  + K P W+  A+          S  +S      +    R  KRCA+H++IS 
Sbjct: 277 AQVLSKPSSTKLPPWMGQAVSP--------SNTASLLNCEPLRVQPRKLKRCASHIYISR 328

Query: 326 YIKSLEVPKGQVIKEPEIYECHQMRAHEGSKHGVLLEVHSLNRMRNGVPSATVRNPQESQ 385
            IK L+  K  +         ++ R  E S+  +   V ++N  +     A V  P+  Q
Sbjct: 329 LIKVLQTSKSSLA----TLNQNEQRYSEMSERRLPDSVITINDFK-----AIVSPPKRYQ 379

Query: 386 N--CILQQQCH-----YGDISLAAPTTEVYG--TQKQQSFNFLSLS 422
           N   +   + H       D++  A   E+YG  T ++QSF+FLSLS
Sbjct: 380 NPHLLDMHRAHNPKPVQEDMTKLA--LELYGPHTSQKQSFDFLSLS 423