Miyakogusa Predicted Gene
- Lj5g3v0186680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0186680.1 Non Chatacterized Hit- tr|F6I100|F6I100_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.98,6e-18,seg,NULL; Skp1 dimerisation domain-like,SKP1
component, dimerisation; POZ domain,BTB/POZ fold; no de,CUFF.52628.1
(134 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42190.1 | Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF com... 81 2e-16
AT1G75950.1 | Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase... 80 5e-16
AT1G20140.1 | Symbols: ASK4, SK4 | SKP1-like 4 | chr1:6986430-69... 79 8e-16
AT2G25700.1 | Symbols: ASK3, SK3 | SKP1-like 3 | chr2:10948914-1... 76 8e-15
AT3G21850.1 | Symbols: ASK9, SK9 | SKP1-like 9 | chr3:7697089-76... 66 8e-12
AT3G60010.1 | Symbols: ASK13, SK13 | SKP1-like 13 | chr3:2216309... 64 4e-11
AT4G34210.1 | Symbols: ASK11, SK11 | SKP1-like 11 | chr4:1637900... 61 2e-10
AT3G21830.1 | Symbols: ASK8, SK8 | SKP1-like 8 | chr3:7693481-76... 60 3e-10
AT4G34470.1 | Symbols: ASK12, SK12 | SKP1-like 12 | chr4:1648002... 60 5e-10
AT3G21840.1 | Symbols: ASK7, SK7 | SKP1-like 7 | chr3:7695490-76... 59 6e-10
AT2G03190.1 | Symbols: ASK16, SK16 | SKP1-like 16 | chr2:964232-... 56 6e-09
AT3G21860.1 | Symbols: ASK10, SK10 | SKP1-like 10 | chr3:7699777... 56 7e-09
AT2G03170.1 | Symbols: ASK14, SK14 | SKP1-like 14 | chr2:961322-... 54 4e-08
AT3G60020.1 | Symbols: ASK5, SK5 | SKP1-like 5 | chr3:22164844-2... 53 5e-08
AT2G20160.1 | Symbols: MEO, ASK17 | E3 ubiquitin ligase SCF comp... 52 1e-07
AT3G25650.1 | Symbols: ASK15, SK15 | SKP1-like 15 | chr3:9335876... 49 7e-07
>AT5G42190.1 | Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF
complex subunit SKP1/ASK1 family protein |
chr5:16854495-16855516 REVERSE LENGTH=171
Length = 171
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
Query: 3 STARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYC 60
ST RKITLKSSDG L SQTIK MI + + L +VT IL+KVI+YC
Sbjct: 2 STVRKITLKSSDGENFEIDEAVA-LESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 61 NKH-----------------------SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXX 97
+H S S+ +L+ WD++F+KVD+ TLFD
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120
Query: 98 XXXXXXXXVHTVAQMMKGMNPQEI 121
TVA M+KG P+EI
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEI 144
>AT1G75950.1 | Symbols: SKP1, ASK1, ATSKP1, SKP1A, UIP1 | S phase
kinase-associated protein 1 | chr1:28516715-28517454
FORWARD LENGTH=160
Length = 160
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCN 61
+A+KI LKSSDG L SQTI M+ + V L +VT ILAKVI+YC
Sbjct: 2 SAKKIVLKSSDGESFEVEEAVA-LESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCK 60
Query: 62 KH-------------SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHT 108
+H ++ S+++L+ WDADF+K+D+ TLF+ T
Sbjct: 61 RHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 109 VAQMMKGMNPQEI 121
VA M+KG P+EI
Sbjct: 121 VADMIKGKTPEEI 133
>AT1G20140.1 | Symbols: ASK4, SK4 | SKP1-like 4 |
chr1:6986430-6987079 FORWARD LENGTH=163
Length = 163
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 1 MASTARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVI 57
MA T + I LKSSDG + SQTIK MI A +GI L +VTG ILAKVI
Sbjct: 1 MAETKKMIILKSSDGESFEIEEAVA-VKSQTIKHMIEDDCADNGI-PLPNVTGAILAKVI 58
Query: 58 QYCNKH--------------SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXX 103
+YC KH S +EL+ WD++FVKVD+ TLFD
Sbjct: 59 EYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLD 118
Query: 104 XXVHTVAQMMKGMNPQEI 121
VA M+G P+++
Sbjct: 119 LTCKAVADQMRGKTPEQM 136
>AT2G25700.1 | Symbols: ASK3, SK3 | SKP1-like 3 |
chr2:10948914-10949551 REVERSE LENGTH=163
Length = 163
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 1 MASTARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVI 57
MA T + I LKSSDG + SQTIK MI +GI L +VTG ILAKVI
Sbjct: 1 MAETKKMIILKSSDGESFEVEEAVA-VESQTIKHMIEDDCVDNGI-PLPNVTGAILAKVI 58
Query: 58 QYCNKH--------------SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXX 103
+YC KH S +EL+ WD DFVKVD TLFD
Sbjct: 59 EYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLD 118
Query: 104 XXVHTVAQMMKGMNPQEICE 123
VA M+G P ++ E
Sbjct: 119 LTCKAVADQMRGKTPAQMRE 138
>AT3G21850.1 | Symbols: ASK9, SK9 | SKP1-like 9 |
chr3:7697089-7697550 REVERSE LENGTH=153
Length = 153
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCN 61
+ +KI LKSSDG I M + + L +VTG ILA VI+YCN
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 62 KH-----SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMKGM 116
KH + S+++L++WD +F++ D T+FD TVA+++KG
Sbjct: 62 KHHVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGN 121
Query: 117 NPQEICEL 124
P++I E
Sbjct: 122 TPEQIREF 129
>AT3G60010.1 | Symbols: ASK13, SK13 | SKP1-like 13 |
chr3:22163094-22163558 REVERSE LENGTH=154
Length = 154
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 5 ARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCNK 62
++ + L SSDG + SQTI MI + + V +++VTG IL+KVI+YC K
Sbjct: 2 SKMVMLLSSDGESFQVEEAVA-VQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKK 60
Query: 63 H------SSGSENELRQWDADFVKV--DRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMK 114
H + S++EL++WDA+F+K TLFD TVA M+
Sbjct: 61 HVVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMIT 120
Query: 115 GMNPQEI 121
G P EI
Sbjct: 121 GKKPDEI 127
>AT4G34210.1 | Symbols: ASK11, SK11 | SKP1-like 11 |
chr4:16379003-16379461 FORWARD LENGTH=152
Length = 152
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCN 61
+++ I L SSDG + SQTI M+ + + + L++V IL KVI+YC
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVA-IQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK 60
Query: 62 KH-----SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMKGM 116
KH + SE +L WD F+ +++ T+F+ TVA M+KG
Sbjct: 61 KHHVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGK 120
Query: 117 NPQEI 121
P+EI
Sbjct: 121 TPEEI 125
>AT3G21830.1 | Symbols: ASK8, SK8 | SKP1-like 8 |
chr3:7693481-7693939 REVERSE LENGTH=152
Length = 152
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMINAH--SGIVALSDVTGNILAKVIQYCN 61
+ +KI LKSS+G QTI MI A ++ + +T IL VI+YCN
Sbjct: 2 STKKIMLKSSEGKTFEIEEETAR-QCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCN 60
Query: 62 KH-----SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMKGM 116
KH + S+++L +WD +F++ D+ T+F TVA M+KG
Sbjct: 61 KHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGN 120
Query: 117 NPQEICEL 124
P+++ E
Sbjct: 121 TPKQMREF 128
>AT4G34470.1 | Symbols: ASK12, SK12 | SKP1-like 12 |
chr4:16480022-16480480 REVERSE LENGTH=152
Length = 152
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCN 61
+++ I L SSDG + SQTI M+ + + + L++V IL KVI+YC
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVA-IQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK 60
Query: 62 KH-----SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMKGM 116
K+ + SE +L +WD F+ +++ T+F+ TVA M+KG
Sbjct: 61 KYHVDEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGK 120
Query: 117 NPQEI 121
P+EI
Sbjct: 121 TPEEI 125
>AT3G21840.1 | Symbols: ASK7, SK7 | SKP1-like 7 |
chr3:7695490-7695867 REVERSE LENGTH=125
Length = 125
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMINAH--SGIVALSDVTGNILAKVIQYCN 61
+ +KI LKSSDG QTI MI A ++ +S+VT IL VI+YCN
Sbjct: 2 STKKIMLKSSDGKMFEIEEETAR-QCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCN 60
Query: 62 KH-----SSGSENELRQWDADFVKVDRDTLF 87
KH + S+ +L++WD +F++ D+ T+F
Sbjct: 61 KHHVDAANPCSDEDLKKWDKEFMEKDQYTIF 91
>AT2G03190.1 | Symbols: ASK16, SK16 | SKP1-like 16 |
chr2:964232-964744 FORWARD LENGTH=170
Length = 170
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 20/102 (19%)
Query: 43 VALSDVTGNILAKVIQYCNKH-------------------SSGSENELRQWDADFVK-VD 82
+ L +VTGNILA VI+YC KH + ++NELR WDA+F+K D
Sbjct: 42 IPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFD 101
Query: 83 RDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMKGMNPQEICEL 124
+T+ TVA MK M+P+E+ EL
Sbjct: 102 METVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVREL 143
>AT3G21860.1 | Symbols: ASK10, SK10 | SKP1-like 10 |
chr3:7699777-7700235 REVERSE LENGTH=152
Length = 152
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCN 61
+ +KI LKSSDG QTI M + + L +VTG IL VI+YCN
Sbjct: 2 STKKIILKSSDGHSFEVEEEAA-CQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCN 60
Query: 62 KH-----SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMK 114
KH + S+ +L++WD +F++ + T+FD TVA M+K
Sbjct: 61 KHHVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIK 118
>AT2G03170.1 | Symbols: ASK14, SK14 | SKP1-like 14 |
chr2:961322-961771 FORWARD LENGTH=149
Length = 149
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMINAHSGI--VALSDVTGNILAKVIQYCN 61
++ KI L SSDG + ++ MI + V L +VTG IL+ V++YC
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVAR-KLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCK 60
Query: 62 KHSSGSE-NELRQWDADFV-KVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQMMKGMNPQ 119
KH E +E + WD +F+ K D+ T+F TVA +K P+
Sbjct: 61 KHVVDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPE 120
Query: 120 EICEL 124
EI E+
Sbjct: 121 EIREI 125
>AT3G60020.1 | Symbols: ASK5, SK5 | SKP1-like 5 |
chr3:22164844-22165305 REVERSE LENGTH=153
Length = 153
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 7 KITLKSSDGXXXXXXXXXXXLHSQTIKDMIN--AHSGIVALSDVTGNILAKVIQYCNKH- 63
KI LKSSDG S I M+ + ++ L +VT IL VI YC KH
Sbjct: 4 KIMLKSSDGKSFEIDEDVAR-KSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHV 62
Query: 64 SSGSENELRQWDADFVK-VDRDTLFDXXXXXXXXXXXXXXXXXVHTV-----AQMMKGMN 117
S E +L++WDADF+K ++ LFD TV A ++ G
Sbjct: 63 KSKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKT 122
Query: 118 PQEI 121
P EI
Sbjct: 123 PDEI 126
>AT2G20160.1 | Symbols: MEO, ASK17 | E3 ubiquitin ligase SCF
complex subunit SKP1/ASK1 family protein |
chr2:8699672-8700124 REVERSE LENGTH=150
Length = 150
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMINAHSG--IVALSDVTGNILAKVIQYCN 61
+++KI L SSD Q + MI+ + L +VTG ILA +I+YC
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVAR-KMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCK 60
Query: 62 KHSSGSE--NELRQWDADFVK-VDRDTLF 87
KH E NE WDA+FVK +D DTLF
Sbjct: 61 KHVDDVEAKNEFVTWDAEFVKNIDMDTLF 89
>AT3G25650.1 | Symbols: ASK15, SK15 | SKP1-like 15 |
chr3:9335876-9336459 REVERSE LENGTH=177
Length = 177
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Query: 4 TARKITLKSSDGXXXXXXXXXXXLHSQTIKDMINAHSGI--VALSDVTGNILAKVIQYCN 61
++ KI L SSDG Q +K ++ I + L +VTGNIL+ V++YC
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVAR-KLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCK 60
Query: 62 KH--------------SSGSENELRQ----WDADFVK-VDRDTLFDXXXXXXXXXXXXXX 102
KH ++E +Q WDA+F+K +D +T+F
Sbjct: 61 KHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLL 120
Query: 103 XXXVHTVAQMMKGMNPQEICEL 124
TVA +K P+E+ EL
Sbjct: 121 GLTCQTVADYIKDKTPEEVREL 142