Miyakogusa Predicted Gene
- Lj5g3v0165540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0165540.1 tr|G7J4N4|G7J4N4_MEDTR Zinc finger protein
CONSTANS-like protein OS=Medicago truncatula
GN=MTR_3g113,30.04,0.00000000007,zf-B_box,Zinc finger, B-box; FAMILY
NOT NAMED,NULL; B-Box-type zinc finger,Zinc finger, B-box;
seg,N,CUFF.52616.1
(308 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 248 3e-66
AT4G39070.1 | Symbols: | B-box zinc finger family protein | chr... 182 3e-46
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f... 139 2e-33
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei... 139 2e-33
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 136 1e-32
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 136 2e-32
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133... 127 1e-29
AT4G10240.1 | Symbols: | B-box zinc finger family protein | chr... 119 2e-27
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 100 1e-21
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 97 1e-20
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 85 7e-17
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 84 1e-16
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 80 1e-15
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 80 1e-15
AT4G38960.3 | Symbols: | B-box type zinc finger family protein ... 80 2e-15
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 78 7e-15
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 76 3e-14
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 74 1e-13
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 69 5e-12
AT2G47890.2 | Symbols: | B-box type zinc finger protein with CC... 68 8e-12
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 67 2e-11
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 67 2e-11
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 66 3e-11
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 66 4e-11
AT4G38960.2 | Symbols: | B-box type zinc finger family protein ... 61 1e-09
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 60 2e-09
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 60 2e-09
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 60 2e-09
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 60 2e-09
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 60 2e-09
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 54 1e-07
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 54 2e-07
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 53 3e-07
AT1G68520.1 | Symbols: | B-box type zinc finger protein with CC... 52 4e-07
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 50 3e-06
AT1G73870.1 | Symbols: | B-box type zinc finger protein with CC... 50 3e-06
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 248 bits (633), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 189/345 (54%), Gaps = 51/345 (14%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQ--HPLC 58
MKI+CDVC K+EASVFCTADEA+LC GCDH+VHHANKLASKH RFSL PSS PLC
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 59 DICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKLSATPKLYXXXXXX 118
DICQ++KA +FCQQDRAILCK+CD SIH+ NEHT+KHDRFLLTGVKLSAT +Y
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120
Query: 119 XXXXXXXXGLTNXXXXXXXXXXXXXXXXXXXHQGLIAKTVPSVESVLPHTTTINKVGGSL 178
+ + L A P + P +K+ G
Sbjct: 121 SSSSSSNQDFS--------VPGSSISNPPPLKKPLSAP--PQSNKIQP----FSKINGGD 166
Query: 179 VTMAGTGSTSSISEYLIETLPGWQVEDLLDSYVVPFGFSK-GDHDILQQFDDAGIEGN-- 235
++ GSTS+ISEYL++TLPGW VED LDS + +GFSK GD D + + + + N
Sbjct: 167 ASVNQWGSTSTISEYLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDGVLPYMEPEDDNNTK 226
Query: 236 ------------LCSFSPNNNGIWVPQAPPPLYSSQMDRVFGQSVTKEGGTTNI------ 277
S N GIWVPQ P L SS ++ F Q + G N
Sbjct: 227 RNNNNNNNNNNNTVSLPSKNLGIWVPQIPQTLPSSYPNQYFSQDNNIQFGMYNKETSPEV 286
Query: 278 -----------KGSSRSRLRDD-VFTVPQISPD--STSKRTRYLW 308
+G + R DD FTVPQI+P S++K+ R W
Sbjct: 287 VSFAPIQNMKQQGQNNKRWYDDGGFTVPQITPPPLSSNKKFRSFW 331
>AT4G39070.1 | Symbols: | B-box zinc finger family protein |
chr4:18205061-18206421 REVERSE LENGTH=242
Length = 242
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 124/209 (59%), Gaps = 10/209 (4%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
MKI C VC K+EASVFC ADEAALC+GCD VH ANKLA KH RFSL +P+ K PLCDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKLSATPKLYXXXXXXXX 120
C ER+A +FCQ+DRAILC+ECD+ IH NEHT+KH+RFLLTGVK+SA+P Y
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120
Query: 121 XXXXXXGLTN-XXXXXXXXXXXXXXXXXXXHQGLIAKTVPSVESVLPHTTTINKVGGSLV 179
T + +E H +
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSD--------- 171
Query: 180 TMAGTGSTSSISEYLIETLPGWQVEDLLD 208
+ +G+G T SISEYL+ETLPGW+VEDLL+
Sbjct: 172 SGSGSGCTGSISEYLMETLPGWRVEDLLE 200
>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
finger protein 1 | chr1:29567370-29568662 FORWARD
LENGTH=299
Length = 299
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
MKIQC+VC EA+V C ADEAALC CD ++H ANKLA KHQR L + S+ P CDI
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL-SASASSIPKCDI 59
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKL 105
CQE F FC QDRA+LC++CD++IH+VN H H RFLLTG+K+
Sbjct: 60 CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104
>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein 1
| chr1:29567370-29568662 FORWARD LENGTH=319
Length = 319
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
MKIQC+VC EA+V C ADEAALC CD ++H ANKLA KHQR L + S+ P CDI
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL-SASASSIPKCDI 59
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKL 105
CQE F FC QDRA+LC++CD++IH+VN H H RFLLTG+K+
Sbjct: 60 CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
MKIQCDVC K A+V C ADEAALC CD +H ANKLASKHQR L++ S+K P CDI
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK-FPRCDI 59
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKLSAT 108
CQE+ AF+FC +DRA+LC++CD SIH N + H RFL TG+K++ T
Sbjct: 60 CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
MKIQCDVC K A+V C ADEAALC CD +H ANKLASKHQR L++ S+K P CDI
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK-FPRCDI 59
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKLSAT 108
CQE+ AF+FC +DRA+LC++CD SIH N + H RFL TG+K++ T
Sbjct: 60 CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALT 107
>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
chr2:13382150-13383302 FORWARD LENGTH=238
Length = 238
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
MKIQCDVC K A++ C ADEAALC CD VH ANKLASKHQR L + S+K P CDI
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTK-FPPCDI 59
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKLS 106
C E+ AF+FC +DRA+LC++CD + H+ N + H RFL TG++++
Sbjct: 60 CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVA 105
>AT4G10240.1 | Symbols: | B-box zinc finger family protein |
chr4:6368967-6369526 REVERSE LENGTH=162
Length = 162
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 9/111 (8%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLH-----TPSSKQH 55
MKIQC+VC K EA V C +DEA LC CD +VH ANKL +H R +L ++
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 56 PLCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGVKLS 106
PLCDICQERK + FC +DRA+LC +CD +IH+ N H RFLL+GV++S
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVS 107
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M+I CD C A +FC ADEAALC CD +VH NKLAS+H R L PS+ P CDI
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNA--PCCDI 58
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
C+ AF +C+ D + LC +CDM +H + T H RFLL
Sbjct: 59 CENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HGRFLL 96
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M+I CD C A VFC ADEAALC CD +VH NKLAS+H R L PS+ P CDI
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNA--PSCDI 58
Query: 61 CQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
C+ AF +C+ D + LC +CDM +H + T H RFLL
Sbjct: 59 CENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLL 96
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C A++FC AD A LC CD ++H ANKLAS+H+R LC++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVW----------LCEVCEQA 57
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLT 101
A + C+ D A LC CD IHS N +++H+R +T
Sbjct: 58 PAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGV 103
LCD C+ A +FC+ D A LC +CD IH+ N+ +H+R L V
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEV 53
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C A++FC AD A LC CD ++H ANKLAS+H+R LC++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVW----------LCEVCEQA 57
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLT 101
A + C+ D A LC CD IHS N +++H+R +T
Sbjct: 58 PAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTGV 103
LCD C+ A +FC+ D A LC +CD IH+ N+ +H+R L V
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEV 53
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C A+++C D A LC CD +VH ANKLAS+H R +C++C++
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVW----------MCEVCEQA 99
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLT 101
A + C+ D A LC CD IHS N ++H+R +T
Sbjct: 100 PAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C +V+C AD A LC CD +VH AN+LAS+H+R +C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVR----------VCQSCERA 61
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDR 97
A FC+ D A LC CD IHS N ++H R
Sbjct: 62 PAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
>AT4G38960.3 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=226
Length = 226
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 62/143 (43%), Gaps = 47/143 (32%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHR----------------------------- 31
M+I CD C A +FC ADEAALC CD +
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60
Query: 32 --------------VHHANKLASKHQRFSLHTPSSKQHPLCDICQERKAFMFCQQDRAIL 77
VH NKLAS+H R L PS+ P CDIC+ AF +C+ D + L
Sbjct: 61 IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNA--PCCDICENAPAFFYCEIDGSSL 118
Query: 78 CKECDMSIHSVNEHTQKHDRFLL 100
C +CDM +H + T H RFLL
Sbjct: 119 CLQCDMVVHVGGKRT--HGRFLL 139
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C +V+C AD A LC CD RVH AN++AS+H+R +C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVR----------VCQSCESA 65
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDR 97
A C+ D A LC CD IHS N ++H R
Sbjct: 66 PAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C + +V+C AD A LC CD +VH AN++AS+H+R +C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVR----------VCESCERA 69
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDR 97
A C+ D A LC CD +HS N ++H R
Sbjct: 70 PAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C + +V+C AD A LC CD +VH AN++AS+H+R +C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVR----------VCESCERA 69
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDR 97
A C+ D A LC CD +HS N ++H R
Sbjct: 70 PAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C A V+C AD A LC CD +VH AN+L +KH R SL LCD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR-SL---------LCDSCNES 62
Query: 65 KAFMFCQQDRAILCKECDMSIHSVN 89
+ +FC+ +R++LC+ CD H+ +
Sbjct: 63 PSSLFCETERSVLCQNCDWQHHTAS 87
>AT2G47890.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609036 FORWARD LENGTH=237
Length = 237
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C A V+C AD A LC CD +VH AN+L +KH R SL LCD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR-SL---------LCDSCNES 62
Query: 65 KAFMFCQQDRAILCKECDMSIHSVN 89
+ +FC+ +R++LC+ CD H+ +
Sbjct: 63 PSSLFCETERSVLCQNCDWQHHTAS 87
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 3 IQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQ 62
+ C+ C + A +FC AD A LC CD VH AN L+ KH R +CD C
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR----------SQICDNCS 59
Query: 63 ERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTG 102
+ + C D +LC+ECD +H + H+R + G
Sbjct: 60 KEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 3 IQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQ 62
+ C+ C + A +FC AD A LC CD VH AN L+ KH R +CD C
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR----------SQICDNCS 59
Query: 63 ERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTG 102
+ + C D +LC+ECD +H + H+R + G
Sbjct: 60 KEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDICQER 64
CD C A+VFC D A LC CD R+H ++H+R + C++C++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV----------CEVCEQA 67
Query: 65 KAFMFCQQDRAILCKECDMSIHSVNEHTQKHDR 97
A + C+ D A LC CD IHS N +H+R
Sbjct: 68 PAAVTCKADAAALCVSCDADIHSANPLASRHER 100
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHT 49
C+VC + A+V C AD AALC CD +H AN LAS+H+R + T
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVET 105
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 2 KIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDIC 61
++ CD C + A +FC AD A LC CD +VH AN L+ KH R +CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR----------SQICDNC 55
Query: 62 QERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLLTG 102
+ C D ILC+ECD +H + H R + G
Sbjct: 56 GNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96
>AT4G38960.2 | Symbols: | B-box type zinc finger family protein |
chr4:18162300-18163045 FORWARD LENGTH=150
Length = 150
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 36 NKLASKHQRFSLHTPSSKQHPLCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKH 95
NKLAS+H R L PS+ P CDIC+ AF +C+ D + LC +CDM +H + T H
Sbjct: 3 NKLASRHVRVGLAEPSNA--PCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--H 58
Query: 96 DRFLL 100
RFLL
Sbjct: 59 GRFLL 63
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M CD C + + V+C +D A LC CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERKAFMFCQQDRAILCKECDMSIH 86
C + A + C ++R LC+ CD S H
Sbjct: 51 CNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
+CD C E+++ ++C+ D A LC CD S+HS N +++H R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M CD C + + V+C +D A LC CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERKAFMFCQQDRAILCKECDMSIH 86
C + A + C ++R LC+ CD S H
Sbjct: 51 CNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
+CD C E+++ ++C+ D A LC CD S+HS N +++H R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M CD C + + V+C +D A LC CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERKAFMFCQQDRAILCKECDMSIH 86
C + A + C ++R LC+ CD S H
Sbjct: 51 CNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
+CD C E+++ ++C+ D A LC CD S+HS N +++H R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M CD C + + V+C +D A LC CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERKAFMFCQQDRAILCKECDMSIH 86
C + A + C ++R LC+ CD S H
Sbjct: 51 CNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
+CD C E+++ ++C+ D A LC CD S+HS N +++H R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M CD C + + V+C +D A LC CD VH AN L+ +H R +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRT----------LVCER 50
Query: 61 CQERKAFMFCQQDRAILCKECDMSIH 86
C + A + C +R LC+ CD S H
Sbjct: 51 CNAQPASVRCSDERVSLCQNCDWSGH 76
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 57 LCDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
+CD C E+++ ++C+ D A LC CD ++HS N +++H R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M+ +CD C ++A ++C +D A LC CD VH AN L+ +H R SL LC+
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR-SL---------LCEK 50
Query: 61 CQERKAFMFCQQDRAILCKEC 81
C + + C + LC+ C
Sbjct: 51 CSLQPTAVHCMNENVSLCQGC 71
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 58 CDICQERKAFMFCQQDRAILCKECDMSIHSVNEHTQKHDRFLL 100
CD C KA ++C+ D A LC CD+++HS N +Q+H R LL
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPS 51
CD C K A +C AD+A LC CD VH AN LA +H+R L T S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTAS 63
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M+ C+ C A V+C AD A LC CD +VH AN L+ +H R LCD
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTV----------LCDS 59
Query: 61 CQERKAFMFCQQDRAILCKECDMSIH--SVNEHTQKHDR 97
C+ + + C + LC C+ H +EH ++ R
Sbjct: 60 CKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRRRDLR 98
>AT1G68520.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:25709331-25710749 REVERSE LENGTH=406
Length = 406
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 5 CDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQH 55
CD C K A +C AD+A LC CD VH AN LA +H+R L + S+ ++
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASAGKY 67
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 1 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPSSKQHPLCDI 60
M+ +CD C+ +A ++C +D A LC CD VH AN L+ +H R SL +C+
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR-SL---------ICEK 50
Query: 61 CQERKAFMFCQQDRAILCKEC 81
C + A + C ++ C+ C
Sbjct: 51 CFSQPAAIRCLDEKVSYCQGC 71
>AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:27779214-27780522 FORWARD LENGTH=392
Length = 392
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 5 CDVCSK-DEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHTPS 51
CD C K AS +C AD+A LC CD +H AN LA +H+R L + S
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69