Miyakogusa Predicted Gene

Lj5g3v0144410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0144410.1 tr|G7I5V4|G7I5V4_MEDTR GTPase obg OS=Medicago
truncatula GN=MTR_1g023160 PE=4 SV=1,66.2,0,P-loop containing
nucleoside triphosphate hydrolases,NULL; Obg GTP-binding protein
N-terminal domain,gene.g58442.t1.1
         (425 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family ...   155   7e-38
AT1G07615.1 | Symbols:  | GTP-binding protein Obg/CgtA | chr1:23...   109   3e-24
AT1G30580.1 | Symbols:  | GTP binding | chr1:10831953-10835454 R...    63   4e-10
AT4G39520.1 | Symbols:  | GTP-binding protein-related | chr4:183...    58   1e-08
AT1G56050.1 | Symbols:  | GTP-binding protein-related | chr1:209...    56   6e-08
AT1G72660.3 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07
AT1G72660.2 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07
AT1G72660.1 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07
AT1G17470.2 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally reg...    55   1e-07
AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally reg...    55   1e-07

>AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family
           protein | chr5:6171839-6174823 REVERSE LENGTH=681
          Length = 681

 Score =  155 bits (391), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 164/345 (47%), Gaps = 70/345 (20%)

Query: 44  KYFDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGG---- 99
           + FD A I VR GDGG+G V                 +F+R+      +P GG  G    
Sbjct: 209 RCFDRAKIYVRAGDGGNGVV-----------------AFRRE----KFVPFGGPSGGDGG 247

Query: 100 ---DVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGT 156
              +V V  D S ++LL F     F A RG +    G + S    G     + + V  GT
Sbjct: 248 RGGNVYVEVDGSMNSLLPFRKSVHFRAGRGEH--GRGKMQS----GAKGDNVVVKVAPGT 301

Query: 157 VVKSKRGKTLADLA-------------QPGDEVIV------------ARGGQGGV---LV 188
           VV+  R                      PG   ++             + G   V     
Sbjct: 302 VVRQAREVGSEVEGEEGEEKEVLLELLHPGQRALLLPGGRGGRGNASFKSGMNKVPRIAE 361

Query: 189 HGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLG 248
           +G+ G E+ L+L L++VADVG++G PNAGKSTLL+ I+ A+P IA+YPFTTL+PNLG + 
Sbjct: 362 NGEEGPEMWLDLELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVS 421

Query: 249 GDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPIND 308
            D       Y S   +ADLPGL+EGAH G GLG  F              D +   P  +
Sbjct: 422 FD-------YDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHVVDGSAPQPELE 474

Query: 309 YRTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTREILR 353
           +  VR EL +++PE  E+PY+V  NK+DLP+  ++ P+  +E LR
Sbjct: 475 FEAVRLELELFSPEIAEKPYVVAYNKMDLPDAYEKWPMF-QETLR 518


>AT1G07615.1 | Symbols:  | GTP-binding protein Obg/CgtA |
           chr1:2342277-2344200 REVERSE LENGTH=493
          Length = 493

 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 105/233 (45%), Gaps = 54/233 (23%)

Query: 165 TLADLAQPGDEVIVARGGQGGV-------------------------------------- 186
            +A+L Q G  VI+ARGG+GG+                                      
Sbjct: 224 NVAELTQQGQRVIIARGGEGGLGNVSATRYVRGSKFAKSTIRQTNLRSMEDDAEEDDERS 283

Query: 187 -LVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLG 245
            +  G  G E  L L L+ +ADVGL+G+PNAGKSTLL A++ AKP +  Y FTTL PNLG
Sbjct: 284 SIKAGLLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLG 343

Query: 246 RLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATE-- 303
            +  D            T+AD+PGLI+GAH  +GLG NF              D A+   
Sbjct: 344 NVNYD--------DFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVVDLASGLD 395

Query: 304 -----DPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTREI 351
                 P    R +  EL  +     +R  ++V NKID    ++RL  L R +
Sbjct: 396 GCEGLTPWQQLRDLVMELEFHEEGLSDRSSLIVANKIDEEGAEERLKELKRRV 448


>AT1G30580.1 | Symbols:  | GTP binding | chr1:10831953-10835454
           REVERSE LENGTH=394
          Length = 394

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 19/136 (13%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLG-----GDPSLGAGMYSSEA 262
           +G++GLPN GKSTL   +T       ++PF T+ PN  R+       D         SE 
Sbjct: 27  IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTYKPKSEI 86

Query: 263 ----TLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATE----------DPIND 308
                + D+ GL+ GAH G+GLG NF               A  +          DP+ D
Sbjct: 87  PAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRD 146

Query: 309 YRTVREELRMYNPEYL 324
             T+ EELR+ + E++
Sbjct: 147 LETITEELRLKDIEFV 162


>AT4G39520.1 | Symbols:  | GTP-binding protein-related |
           chr4:18371329-18374000 REVERSE LENGTH=369
          Length = 369

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEATLA 265
           VGL+G P+ GKSTLL  +T    ++A Y FTTL  +P +    G          ++  L 
Sbjct: 68  VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQLL 117

Query: 266 DLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREEL 316
           DLPG+IEGA  GKG GR                DA    PI   R + +EL
Sbjct: 118 DLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAIK--PITHKRLIEKEL 166


>AT1G56050.1 | Symbols:  | GTP-binding protein-related |
           chr1:20963793-20966181 FORWARD LENGTH=421
          Length = 421

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 209 GLIGLPNAGKSTLL-AAITLAKPDIADYPFTTLMPNLG-------RLGGDPSLGAGMYSS 260
           G++GLPN GKSTL  A +   K   A++PF T+ PN+G       RL     L     + 
Sbjct: 57  GIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSKLSGSQKTV 116

Query: 261 EATL--ADLPGLIEGAHLGKGLGRNF 284
            A++   D+ GL++GA  G+GLG  F
Sbjct: 117 PASIEFVDIAGLVKGASQGEGLGNKF 142


>AT1G72660.3 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27354161-27356543
           FORWARD LENGTH=399
          Length = 399

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 267
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 268 PGLIEGAHLGKGLGRN 283
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G72660.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27354161-27356543
           FORWARD LENGTH=399
          Length = 399

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 267
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 268 PGLIEGAHLGKGLGRN 283
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G72660.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27354161-27356543
           FORWARD LENGTH=399
          Length = 399

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 267
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 268 PGLIEGAHLGKGLGRN 283
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G17470.2 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally
           regulated G-protein 1 | chr1:6003442-6006155 FORWARD
           LENGTH=399
          Length = 399

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 267
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 268 PGLIEGAHLGKGLGRN 283
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally
           regulated G-protein 1 | chr1:6003442-6006155 FORWARD
           LENGTH=399
          Length = 399

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 208 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 267
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 268 PGLIEGAHLGKGLGRN 283
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132