Miyakogusa Predicted Gene
- Lj5g3v0144400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0144400.1 tr|F4WWA3|F4WWA3_ACREC Protein C20orf11
OS=Acromyrmex echinatior GN=G5I_10218 PE=4
SV=1,36.2,3e-19,CLTH,CTLH/CRA C-terminal to LisH motif domain;
LISH,LisH dimerisation motif; CTLH,CTLH, C-terminal L,CUFF.52637.1
(201 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06060.1 | Symbols: | LisH and RanBPM domains containing pro... 266 5e-72
AT1G61150.6 | Symbols: | LisH and RanBPM domains containing pro... 85 3e-17
AT1G61150.4 | Symbols: | LisH and RanBPM domains containing pro... 85 3e-17
AT1G61150.2 | Symbols: | LisH and RanBPM domains containing pro... 85 3e-17
AT1G61150.5 | Symbols: | LisH and RanBPM domains containing pro... 85 3e-17
AT1G61150.1 | Symbols: | LisH and RanBPM domains containing pro... 85 4e-17
AT1G35470.2 | Symbols: | SPla/RYanodine receptor (SPRY) domain-... 74 5e-14
AT1G61150.7 | Symbols: | LisH and RanBPM domains containing pro... 70 1e-12
AT1G61150.3 | Symbols: | LisH and RanBPM domains containing pro... 70 1e-12
AT1G35470.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain-... 68 5e-12
AT4G09340.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain-... 67 1e-11
AT4G09300.1 | Symbols: | LisH and RanBPM domains containing pro... 55 3e-08
AT5G09630.1 | Symbols: | LisH/CRA/RING-U-box domains-containing... 51 7e-07
>AT1G06060.1 | Symbols: | LisH and RanBPM domains containing
protein | chr1:1833071-1834516 FORWARD LENGTH=213
Length = 213
Score = 266 bits (681), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 160/198 (80%)
Query: 4 DPRQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHY 63
DPRQ+E + + DI +IV+SYL+HNC+ E+ +S S TG+K+PA +NME+RK+I H+
Sbjct: 2 DPRQFEHTVVADNDIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIHF 61
Query: 64 ALERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFG 123
LER ALKA ELTEQLA+D+LE NKDL FDLL LHFVEL+ + CTEAL+F +T+L+PFG
Sbjct: 62 ILERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPFG 121
Query: 124 KEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILAYFNLPSHTAMER 183
K +KY++ LED MALLAY++PEKSP+FHLLS EYRQQVAD LNR IL + N PS+T MER
Sbjct: 122 KVKKYVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPSYTPMER 181
Query: 184 LIQQTTVVRQCLSQEAGK 201
+IQQ TVVRQ L++E GK
Sbjct: 182 IIQQVTVVRQYLTEENGK 199
>AT1G61150.6 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542979-22544355 FORWARD LENGTH=226
Length = 226
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 6 RQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYAL 65
++ + + ++D+ +V+++L+ Y E+ E F +G K D L + R +
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQ 73
Query: 66 ERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE 125
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E
Sbjct: 74 NGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEE 133
Query: 126 -QKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
Q +++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 134 NQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 180
>AT1G61150.4 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542979-22544355 FORWARD LENGTH=226
Length = 226
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 6 RQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYAL 65
++ + + ++D+ +V+++L+ Y E+ E F +G K D L + R +
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQ 73
Query: 66 ERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE 125
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E
Sbjct: 74 NGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEE 133
Query: 126 -QKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
Q +++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 134 NQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 180
>AT1G61150.2 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542979-22544355 FORWARD LENGTH=226
Length = 226
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 6 RQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYAL 65
++ + + ++D+ +V+++L+ Y E+ E F +G K D L + R +
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQ 73
Query: 66 ERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE 125
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E
Sbjct: 74 NGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEE 133
Query: 126 -QKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
Q +++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 134 NQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 180
>AT1G61150.5 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22543122-22544355 FORWARD LENGTH=220
Length = 220
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 6 RQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYAL 65
++ + + ++D+ +V+++L+ Y E+ E F +G K D L + R +
Sbjct: 9 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQ 67
Query: 66 ERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE 125
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E
Sbjct: 68 NGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEE 127
Query: 126 -QKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
Q +++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 128 NQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 174
>AT1G61150.1 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22542928-22544355 FORWARD LENGTH=243
Length = 243
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 6 RQYEKIAINEKDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYAL 65
++ + + ++D+ +V+++L+ Y E+ E F +G K D L + R +
Sbjct: 32 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTKPEID-LATITDRMAVKKAVQ 90
Query: 66 ERNALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE 125
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E
Sbjct: 91 NGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEE 150
Query: 126 -QKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
Q +++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 151 NQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 197
>AT1G35470.2 | Symbols: | SPla/RYanodine receptor (SPRY)
domain-containing protein | chr1:13051636-13054922
REVERSE LENGTH=467
Length = 467
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 33/230 (14%)
Query: 2 EPDPRQYEKIAINEKDIP-----NIVLSYLIHNCYEESVESFISCTGIKKPADYLEN--- 53
E R +++AI + IP +V +YL+H YEE++++F T P +++
Sbjct: 227 EASERNKQQLAIEKISIPPNIGYGLVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENA 286
Query: 54 ---------MEKRKKIFHYALERNALKAIELTEQLAKDILENNKDLLFDLLSLH-FVELV 103
+++RK + A+ ++L I++++K ++ LL F+ELV
Sbjct: 287 IDEDDSSYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELV 346
Query: 104 RSRKCTEALEFAQTKLSPFGKEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVAD 163
R K E + + + +L+ F + +ED ALLAY++PE+S V++ L R+ VAD
Sbjct: 347 RVGKLEEGVNYGRLELAKFVGLTGFQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVAD 406
Query: 164 RLNRAILAY----------FNLPSHTAMERLIQQTTVV---RQCLSQEAG 200
+N AIL+ +L SH +E+L++Q TV R+ L+ + G
Sbjct: 407 AVNAAILSTNPNKKDVQRSCHLQSH--LEKLLRQLTVCCLERRSLNGDQG 454
>AT1G61150.7 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22543304-22544355 FORWARD LENGTH=193
Length = 193
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 68 NALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE-Q 126
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E Q
Sbjct: 43 NVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQ 102
Query: 127 KYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
+++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 103 AFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 147
>AT1G61150.3 | Symbols: | LisH and RanBPM domains containing
protein | chr1:22543304-22544355 FORWARD LENGTH=193
Length = 193
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 68 NALKAIELTEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKE-Q 126
N AIE L +IL+ N +L F L +EL+R K EALEFAQ +L+P G+E Q
Sbjct: 43 NVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQ 102
Query: 127 KYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILA 171
+++ LE +ALL + + PV LL +R + A +N AIL
Sbjct: 103 AFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILT 147
>AT1G35470.1 | Symbols: | SPla/RYanodine receptor (SPRY)
domain-containing protein | chr1:13051636-13054922
REVERSE LENGTH=465
Length = 465
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 35/230 (15%)
Query: 2 EPDPRQYEKIAINEKDIP-----NIVLSYLIHNCYEESVESFISCTGIKKPADYLEN--- 53
E R +++AI + IP +V +YL+H YEE++++F T P +++
Sbjct: 227 EASERNKQQLAIEKISIPPNIGYGLVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENA 286
Query: 54 ---------MEKRKKIFHYALERNALKAIELTEQLAKDILENNKDLLFDLLSLH-FVELV 103
+++RK + A+ ++L I++++K ++ LL F+ELV
Sbjct: 287 IDEDDSSYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELV 346
Query: 104 RSRKCTEALEFAQTKLSPFGKEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVAD 163
K E + + + +L+ F + +ED ALLAY++PE+S V++ L R+ VAD
Sbjct: 347 G--KLEEGVNYGRLELAKFVGLTGFQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVAD 404
Query: 164 RLNRAILAY----------FNLPSHTAMERLIQQTTVV---RQCLSQEAG 200
+N AIL+ +L SH +E+L++Q TV R+ L+ + G
Sbjct: 405 AVNAAILSTNPNKKDVQRSCHLQSH--LEKLLRQLTVCCLERRSLNGDQG 452
>AT4G09340.1 | Symbols: | SPla/RYanodine receptor (SPRY)
domain-containing protein | chr4:5925015-5927597 REVERSE
LENGTH=447
Length = 447
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 2 EPDPRQYEKIAINEKDIP-----NIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEK 56
E R ++IAI + IP +V +YL+H YEE+ + T P N +
Sbjct: 206 ESSERNKQQIAIEKISIPSNMSLGLVKNYLLHYGYEETHHALDLATNSTLPPI---NGAQ 262
Query: 57 RKKI--FHYAL-ERNALKAI----ELTEQLAK------DILENNK-DLLFDLLSLHFVEL 102
I YAL ER L+ + E+ LAK +++N+K ++ F L F+EL
Sbjct: 263 ENGIDDTSYALHERKILRQLIRKGEIDAALAKLRDSYPQLVQNDKSEVCFLLHCQKFIEL 322
Query: 103 VRSRKCTEALEFAQTKLSPFGKEQKYMQNLEDFMALLAYQEPEKSPVFHLLSPEYRQQVA 162
VR EA+++ + +L+ F + LED ALL Y+ PE+S V + L R+ VA
Sbjct: 323 VRIGALEEAVKYGRMELAKFIGLTTFQDILEDCFALLVYERPEESNVGYFLEETQREVVA 382
Query: 163 DRLNRAILAY---FNLPSHTAMERLIQQTTVVRQCL 195
D +N AIL+ SH+ +E L++Q T CL
Sbjct: 383 DTVNAAILSTKPKGKNQSHSHLETLLRQLTAC--CL 416
>AT4G09300.1 | Symbols: | LisH and RanBPM domains containing
protein | chr4:5899008-5900689 FORWARD LENGTH=224
Length = 224
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Query: 16 KDIPNIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKIFHYALERNALKAIEL 75
+D+ +V++ L+ Y E+ E F I P + L +M +R ++ RN AIE
Sbjct: 25 EDMNRLVMNLLVAEGYREAAEKFKE-ESITMPEEDLASMNERLEVIKAIESRNLEDAIEK 83
Query: 76 TEQLAKDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKEQKYMQN-LED 134
L +I++ + F L +EL+R +K EA+ FAQ KL+P +E + +Q LE
Sbjct: 84 LNALNPEIIKTS----FHLHQQMLIELIREKKTEEAVAFAQEKLAPLAEENEALQRELEK 139
Query: 135 FMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILAYFNLPSHTAMERLIQQ 187
+ +L + P L + A +N AI +ERL+++
Sbjct: 140 TVCILVTEGLPNCPSRELFHNSQWIRTASHVNEAIHTSQTGEKGPELERLLKE 192
>AT5G09630.1 | Symbols: | LisH/CRA/RING-U-box domains-containing
protein | chr5:2986016-2987176 REVERSE LENGTH=386
Length = 386
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 20 NIVLSYLIHNCYEESVESFISCTGIKKPADYLENMEKRKKI--FHYALERNALKAIELTE 77
N+V LIH+CY E + C + K A E E R + FH ++ L+ IE
Sbjct: 113 NLVNKILIHHCYREGLFDVGDC--LVKEAGREEETEVRSQFLEFHQIVDSLKLRNIEPAM 170
Query: 78 QLA----KDILENNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKEQKYMQNLE 133
+ + + + L F LLSL + +++R K +ALE+A+T + + K +Q L
Sbjct: 171 RWIFANRGKLKQKSSKLEFKLLSLKYCDILREGKSDDALEYARTHFTQYPLHFKEIQKL- 229
Query: 134 DFMALLAYQEPEKSPVFHLLSPEYRQQVADRLNRAILAYFNL 175
LL EKSP ++SP +V L I+ Y +L
Sbjct: 230 -ITCLLWIGNFEKSPYAEIVSPSCWDKVTKEL---IMEYHHL 267