Miyakogusa Predicted Gene

Lj5g3v0133240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0133240.1 Non Chatacterized Hit- tr|G3R353|G3R353_GORGO
Uncharacterized protein OS=Gorilla gorilla gorilla
GN=,27.2,8e-19,TRAM_LAG1_CLN8,TRAM/LAG1/CLN8 homology domain; TRAM,
LAG1 and CLN8 homology domains.,TRAM/LAG1/CLN8
,NODE_53020_length_1233_cov_40.281429.path1.1
         (244 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G35180.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   308   2e-84
AT1G35170.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   284   4e-77
AT1G45010.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensin...   280   9e-76

>AT1G35180.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr1:12877230-12878644
           REVERSE LENGTH=231
          Length = 231

 Score =  308 bits (789), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 143/226 (63%), Positives = 182/226 (80%), Gaps = 3/226 (1%)

Query: 2   EDYI--TKIIVVGVVSWTTAFVLVRRIFPKRTFDFSNRIVSTIHATLAVTLASLSVEDWK 59
           E+Y+    I  +GV+SW   F+LVRRIF   +FDFS RIVST+HAT+AVTLA+LS++DW 
Sbjct: 3   EEYVRVISITTIGVISWGLIFILVRRIFSSYSFDFSTRIVSTLHATIAVTLATLSIQDWS 62

Query: 60  CPICPVASKSSHPKMQVLAVSLSYLIYDLVCCLFDGRVNMDNTIHHLVSIVGIGAGLYYQ 119
           CP+CP+AS SS  +M+ LA SLSY+IYDL+C  FD  +++DN +HH V I+G  AGL+YQ
Sbjct: 63  CPVCPIASTSSLRQMETLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAGLFYQ 122

Query: 120 KCGSEMVAALWVTEMSSPFLHLRELLKELGYRDTLLNFTADILFAAIFTFARMMAGPCLT 179
           KCGSEMVAALW+TE+SSPFLHLRE+LKE+GYRDT LN  AD+ FA IF+ ARM+ GP L 
Sbjct: 123 KCGSEMVAALWITEISSPFLHLREILKEIGYRDTDLNLAADVCFATIFSLARMVGGPYLV 182

Query: 180 YVTLSANNPFLIKAMGLGLQLVSTFCFFKIVRIMKHKLTKRSTMTN 225
           YVT+SA+NP LIKAM LGLQLVS F F+KI+++M++K  KRS M+N
Sbjct: 183 YVTISADNPILIKAMALGLQLVSAFWFYKILKMMRYKFIKRS-MSN 227


>AT1G35170.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr1:12870738-12872139
           REVERSE LENGTH=229
          Length = 229

 Score =  284 bits (726), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/210 (62%), Positives = 167/210 (79%), Gaps = 2/210 (0%)

Query: 16  WTTAFVLVRRIFPKRTFDFSNRIVSTIHATLAVTLASLSVEDWKCPICPVASKSSHPKMQ 75
           W   F+LVRRIF   +FDFS RIVST+HAT+AVTLA+LS++DW CP+CP+AS SS  +M+
Sbjct: 19  WGLIFILVRRIFSSYSFDFSTRIVSTLHATIAVTLATLSIQDWSCPVCPIASTSSLRQME 78

Query: 76  VLAVSLSYLIYDLVCCLFDGRVNMDNTIHHLVSIVGIGAGLYYQKCGSEMVAALWVTEMS 135
            LA SLSY+IYDL+C  FD  +++DN +HH V I+G  AGL+YQKCGSEMVAA+W+TE+S
Sbjct: 79  TLAFSLSYMIYDLICSHFDQVLSIDNAVHHSVCILGFVAGLFYQKCGSEMVAAIWITEIS 138

Query: 136 SPFLHLRELLKELGYRDTLLNFTADILFAAIFTFARMMAGPCLTYVTLSANNPFLIKAMG 195
           SPFLHLRE+LKE+G RDT LN  AD+ FA IF+ ARM+ GP L YVT+ A+NP LIK MG
Sbjct: 139 SPFLHLREILKEIGCRDTDLNLAADVFFATIFSVARMVGGPYLVYVTIPADNPILIKVMG 198

Query: 196 LGLQLVSTFCFFKIVRIMKHKLTKRSTMTN 225
           LGLQLVS   F+K++++M++K  KRS  T 
Sbjct: 199 LGLQLVSA--FYKLLKMMRYKFIKRSMSTK 226


>AT1G45010.1 | Symbols:  | TRAM, LAG1 and CLN8 (TLC) lipid-sensing
           domain containing protein | chr1:17013513-17015403
           REVERSE LENGTH=231
          Length = 231

 Score =  280 bits (715), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 136/214 (63%), Positives = 169/214 (78%)

Query: 7   KIIVVGVVSWTTAFVLVRRIFPKRTFDFSNRIVSTIHATLAVTLASLSVEDWKCPICPVA 66
           KIIV GV+SW  AF+L RRIF   +F FSNR++ST HAT+AVTLA+LSV+D  CP+CP+A
Sbjct: 10  KIIVFGVISWGVAFILTRRIFSSYSFSFSNRLLSTAHATIAVTLATLSVQDLSCPVCPLA 69

Query: 67  SKSSHPKMQVLAVSLSYLIYDLVCCLFDGRVNMDNTIHHLVSIVGIGAGLYYQKCGSEMV 126
           SK SH +M V+A SLSY+IYDL+CC FD   ++DN +HH VSI+G  AGL YQK GSE+V
Sbjct: 70  SKPSHKQMDVMAFSLSYMIYDLICCHFDQVFSIDNAVHHFVSILGFIAGLAYQKSGSEIV 129

Query: 127 AALWVTEMSSPFLHLRELLKELGYRDTLLNFTADILFAAIFTFARMMAGPCLTYVTLSAN 186
           A LWV E+SSPF HLRE+LKE+GY+DT LN  AD+ FA IFT AR++ GP L YV+LSA+
Sbjct: 130 ATLWVAEISSPFFHLREILKEIGYKDTKLNLAADVCFATIFTLARIVCGPFLVYVSLSAD 189

Query: 187 NPFLIKAMGLGLQLVSTFCFFKIVRIMKHKLTKR 220
           NP  IKAMG GLQLVS F F+KI  +M++KL K+
Sbjct: 190 NPIFIKAMGSGLQLVSIFWFYKIFGMMRYKLFKK 223