Miyakogusa Predicted Gene

Lj5g3v0112040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0112040.1 Non Chatacterized Hit- tr|I1GQK0|I1GQK0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,70.59,2e-19,
,NODE_17573_length_663_cov_119.892914.path2.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75380.3 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in b...   168   1e-42
AT1G75380.2 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in b...   168   1e-42
AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in b...   168   1e-42
AT1G19660.2 | Symbols:  | Wound-responsive family protein | chr1...   152   8e-38
AT1G19660.1 | Symbols:  | Wound-responsive family protein | chr1...   152   8e-38

>AT1G75380.3 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in
           basal defense response 1 | chr1:28281789-28283631
           REVERSE LENGTH=325
          Length = 325

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 110/157 (70%), Gaps = 11/157 (7%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M SVQ P VCP+   +  G C+  ++    ++  RS+F G    G K++     +  +  
Sbjct: 1   MRSVQAPVVCPAIRPRQVGACA-SLVNYTGLKP-RSQFWGNRTKGVKSQG---TTTTITL 55

Query: 58  RKCWTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHL 114
           R C   ++C F+  S  +   +ENF E DEEYVNSSV+EAVEVKSGADGF++KMRDGR L
Sbjct: 56  RLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQL 115

Query: 115 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 152


>AT1G75380.2 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in
           basal defense response 1 | chr1:28281789-28283631
           REVERSE LENGTH=325
          Length = 325

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 110/157 (70%), Gaps = 11/157 (7%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M SVQ P VCP+   +  G C+  ++    ++  RS+F G    G K++     +  +  
Sbjct: 1   MRSVQAPVVCPAIRPRQVGACA-SLVNYTGLKP-RSQFWGNRTKGVKSQG---TTTTITL 55

Query: 58  RKCWTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHL 114
           R C   ++C F+  S  +   +ENF E DEEYVNSSV+EAVEVKSGADGF++KMRDGR L
Sbjct: 56  RLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQL 115

Query: 115 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 152


>AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in
           basal defense response 1 | chr1:28281789-28283631
           REVERSE LENGTH=325
          Length = 325

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 110/157 (70%), Gaps = 11/157 (7%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M SVQ P VCP+   +  G C+  ++    ++  RS+F G    G K++     +  +  
Sbjct: 1   MRSVQAPVVCPAIRPRQVGACA-SLVNYTGLKP-RSQFWGNRTKGVKSQG---TTTTITL 55

Query: 58  RKCWTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHL 114
           R C   ++C F+  S  +   +ENF E DEEYVNSSV+EAVEVKSGADGF++KMRDGR L
Sbjct: 56  RLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQL 115

Query: 115 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 152


>AT1G19660.2 | Symbols:  | Wound-responsive family protein |
           chr1:6800361-6802240 REVERSE LENGTH=329
          Length = 329

 Score =  152 bits (384), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 9/158 (5%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMN-VRCIRSEFLGLNGGGSKAKQRGFLSCDVN 56
           M S+Q P VCPS   +  G  +L +   ++  R +R +F G N   +   Q   ++  ++
Sbjct: 1   MRSLQAPVVCPSVRPRQLGVSALLVNCSVSKTRSLRKQFWG-NQTKNDKSQAATVNLRLH 59

Query: 57  TRKCWTVVRCSFNPSSS---NDSENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRH 113
            R+ +  ++C F+  S    + +ENF E DE+YV SSV+EAVEVKSG DGF++KM+DGR 
Sbjct: 60  LRR-YKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118

Query: 114 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIV
Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIV 156


>AT1G19660.1 | Symbols:  | Wound-responsive family protein |
           chr1:6800361-6802240 REVERSE LENGTH=329
          Length = 329

 Score =  152 bits (384), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 9/158 (5%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMN-VRCIRSEFLGLNGGGSKAKQRGFLSCDVN 56
           M S+Q P VCPS   +  G  +L +   ++  R +R +F G N   +   Q   ++  ++
Sbjct: 1   MRSLQAPVVCPSVRPRQLGVSALLVNCSVSKTRSLRKQFWG-NQTKNDKSQAATVNLRLH 59

Query: 57  TRKCWTVVRCSFNPSSS---NDSENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRH 113
            R+ +  ++C F+  S    + +ENF E DE+YV SSV+EAVEVKSG DGF++KM+DGR 
Sbjct: 60  LRR-YKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118

Query: 114 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIV
Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIV 156