Miyakogusa Predicted Gene

Lj5g3v0110910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0110910.1 Non Chatacterized Hit- tr|K4CN25|K4CN25_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,42.99,2e-19,Acid proteases,Peptidase aspartic; no
description,Peptidase aspartic, catalytic; BASIC 7S
GLOBULIN-R,gene.g58410.t1.1
         (110 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03220.1 | Symbols:  | Eukaryotic aspartyl protease family pr...   117   1e-27
AT1G03230.1 | Symbols:  | Eukaryotic aspartyl protease family pr...   117   1e-27
AT5G19100.1 | Symbols:  | Eukaryotic aspartyl protease family pr...   108   9e-25
AT5G19110.1 | Symbols:  | Eukaryotic aspartyl protease family pr...   103   3e-23
AT5G48430.1 | Symbols:  | Eukaryotic aspartyl protease family pr...    86   4e-18
AT5G19120.1 | Symbols:  | Eukaryotic aspartyl protease family pr...    75   9e-15

>AT1G03220.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr1:787143-788444 FORWARD LENGTH=433
          Length = 433

 Score =  117 bits (294), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 1/107 (0%)

Query: 2   KAAAVAPFGACFDLSTIDRTATGLDVPTIDLVLQG-NVEWTIYGGNSMVLVKKNVACLGF 60
           + A+V PFGACF    +  T  G  VP I+LVL   +V W I+G NSMV V  +V CLGF
Sbjct: 320 RVASVKPFGACFSTKNVGVTRLGYAVPEIELVLHSKDVVWRIFGANSMVSVSDDVICLGF 379

Query: 61  VDGGKEAMAAVVIGGHQLEDNLLEFDLASSKLGFTSSLLLHHARCSH 107
           VDGG  A  +VVIGG QLEDNL+EFDLAS+K GF+S+LL     C++
Sbjct: 380 VDGGVNARTSVVIGGFQLEDNLIEFDLASNKFGFSSTLLGRQTNCAN 426


>AT1G03230.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr1:790110-791414 FORWARD LENGTH=434
          Length = 434

 Score =  117 bits (293), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 1/107 (0%)

Query: 2   KAAAVAPFGACFDLSTIDRTATGLDVPTIDLVLQG-NVEWTIYGGNSMVLVKKNVACLGF 60
           + A+V PFGACF    +  T  G  VP I LVL   +V W I+G NSMV V  +V CLGF
Sbjct: 321 RVASVKPFGACFSTKNVGVTRLGYAVPEIQLVLHSKDVVWRIFGANSMVSVSDDVICLGF 380

Query: 61  VDGGKEAMAAVVIGGHQLEDNLLEFDLASSKLGFTSSLLLHHARCSH 107
           VDGG    A+VVIGG QLEDNL+EFDLAS+K GF+S+LL     C++
Sbjct: 381 VDGGVNPGASVVIGGFQLEDNLIEFDLASNKFGFSSTLLGRQTNCAN 427


>AT5G19100.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr5:6408242-6409417 REVERSE LENGTH=391
          Length = 391

 Score =  108 bits (269), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 63/108 (58%), Positives = 73/108 (67%), Gaps = 6/108 (5%)

Query: 2   KAAAVAPFGACFDLSTIDRTATGLDVPTIDLVLQGNVEWTIYGGNSMVLVKKNVACLGFV 61
           KA AV PFGACF       +  G  VP IDLVL G  +W IYG NS+V V KNV CLGFV
Sbjct: 286 KAPAVKPFGACF------YSNGGRGVPVIDLVLSGGAKWRIYGSNSLVKVNKNVVCLGFV 339

Query: 62  DGGKEAMAAVVIGGHQLEDNLLEFDLASSKLGFTSSLLLHHARCSHVR 109
           DGG +    +VIGG Q+EDNL+EFDL +SK  F+SSLLLH+  CS  R
Sbjct: 340 DGGVKPKYPIVIGGFQMEDNLVEFDLEASKFSFSSSLLLHNTSCSVQR 387


>AT5G19110.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr5:6411720-6413170 REVERSE LENGTH=405
          Length = 405

 Score =  103 bits (256), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 4/109 (3%)

Query: 2   KAAAVAPFGACFDLSTIDRTAT-GLDVPTIDLVLQG---NVEWTIYGGNSMVLVKKNVAC 57
           K  +VAPF  CFD  T  +  T G +VP I++ L G    V+W  YG N++V VK+ V C
Sbjct: 291 KVPSVAPFKHCFDSRTAGKNLTAGPNVPVIEIGLPGRIGEVKWGFYGANTVVKVKETVMC 350

Query: 58  LGFVDGGKEAMAAVVIGGHQLEDNLLEFDLASSKLGFTSSLLLHHARCS 106
           L F+DGGK     +VIG HQL+D++LEFD + + L F+ SLLLH+  CS
Sbjct: 351 LAFIDGGKTPKDLMVIGTHQLQDHMLEFDFSGTVLAFSESLLLHNTSCS 399


>AT5G48430.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr5:19627892-19629112 REVERSE LENGTH=406
          Length = 406

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 6/104 (5%)

Query: 2   KAAAVAPFGACFDLSTIDRTATGLDVPTIDLVLQGNVEWTIYGGNSMVLVKKNVACLGFV 61
           + ++  PF  C        T T   VP IDL L   V W +   N+M  V  +VACL FV
Sbjct: 302 RVSSTTPFEFCLS------TTTNFQVPRIDLELANGVIWKLSPANAMKKVSDDVACLAFV 355

Query: 62  DGGKEAMAAVVIGGHQLEDNLLEFDLASSKLGFTSSLLLHHARC 105
           +GG  A  AV+IG HQ+E+ L+EFD+  S  GF+SSL L  A C
Sbjct: 356 NGGDAAAQAVMIGIHQMENTLVEFDVGRSAFGFSSSLGLVSASC 399


>AT5G19120.1 | Symbols:  | Eukaryotic aspartyl protease family
           protein | chr5:6414585-6415745 FORWARD LENGTH=386
          Length = 386

 Score = 75.1 bits (183), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 9/90 (10%)

Query: 6   VAPFGACFDLSTIDRTATGLDVPTIDLVLQGN-VEWTIYGGNSMVLVKKNVACLGFVDGG 64
           VAPFG CF         + +D P +DL LQ   V W I+G N MV V   V C G VDGG
Sbjct: 294 VAPFGLCF--------TSDVDFPAVDLALQSEMVRWRIHGKNLMVDVGGGVRCSGIVDGG 345

Query: 65  KEAMAAVVIGGHQLEDNLLEFDLASSKLGF 94
              +  +V+GG QLE  +L+FDL +S +GF
Sbjct: 346 SSRVNPIVMGGLQLEGFILDFDLGNSMMGF 375