Miyakogusa Predicted Gene

Lj5g3v0109850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0109850.1 Non Chatacterized Hit- tr|B8A1Y4|B8A1Y4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,59.09,3e-18,Hypothetical
protein TM0160,Bifunctional nuclease; DNase-RNase,Bifunctional
nuclease,CUFF.52836.1
         (327 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75380.3 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in b...   442   e-124
AT1G75380.2 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in b...   442   e-124
AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in b...   442   e-124
AT1G19660.2 | Symbols:  | Wound-responsive family protein | chr1...   419   e-117
AT1G19660.1 | Symbols:  | Wound-responsive family protein | chr1...   419   e-117
AT5G66050.1 | Symbols:  | Wound-responsive family protein | chr5...   117   1e-26
AT5G66050.2 | Symbols:  | Wound-responsive family protein | chr5...   116   2e-26

>AT1G75380.3 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in
           basal defense response 1 | chr1:28281789-28283631
           REVERSE LENGTH=325
          Length = 325

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/332 (66%), Positives = 263/332 (79%), Gaps = 13/332 (3%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M SVQ P VCP+   +  G C+  ++    ++  RS+F G    G K++     +  +  
Sbjct: 1   MRSVQAPVVCPAIRPRQVGACA-SLVNYTGLK-PRSQFWGNRTKGVKSQG---TTTTITL 55

Query: 58  RKCWTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHL 114
           R C   ++C F+  S  +   +ENF E DEEYVNSSV+EAVEVKSGADGF++KMRDGR L
Sbjct: 56  RLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQL 115

Query: 115 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTLY 174
           RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+ +V IARPT+Y
Sbjct: 116 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTMY 175

Query: 175 QVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCK 234
           QVVKEM+DKMGYEVRLVRVT+RVHEAYFAQL+L+KVGN +EC +FDLRPSDAINIAVRCK
Sbjct: 176 QVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIAVRCK 235

Query: 235 VPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLK 294
           +PIQVNKYLAYSDGMRVIESGK+ST  P  DG LFTE DRPNGQ C++T+EFN+L  M++
Sbjct: 236 IPIQVNKYLAYSDGMRVIESGKISTPAPASDGLLFTEQDRPNGQACLDTKEFNILSKMMQ 295

Query: 295 AVGEERYKDAALWRDRLNQLRAGKNVNNRSWT 326
           AV EERY +AA WRD+L Q RA +N+  R +T
Sbjct: 296 AVDEERYDEAAEWRDKLGQFRAKRNL--RKYT 325


>AT1G75380.2 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in
           basal defense response 1 | chr1:28281789-28283631
           REVERSE LENGTH=325
          Length = 325

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/332 (66%), Positives = 263/332 (79%), Gaps = 13/332 (3%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M SVQ P VCP+   +  G C+  ++    ++  RS+F G    G K++     +  +  
Sbjct: 1   MRSVQAPVVCPAIRPRQVGACA-SLVNYTGLK-PRSQFWGNRTKGVKSQG---TTTTITL 55

Query: 58  RKCWTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHL 114
           R C   ++C F+  S  +   +ENF E DEEYVNSSV+EAVEVKSGADGF++KMRDGR L
Sbjct: 56  RLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQL 115

Query: 115 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTLY 174
           RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+ +V IARPT+Y
Sbjct: 116 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTMY 175

Query: 175 QVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCK 234
           QVVKEM+DKMGYEVRLVRVT+RVHEAYFAQL+L+KVGN +EC +FDLRPSDAINIAVRCK
Sbjct: 176 QVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIAVRCK 235

Query: 235 VPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLK 294
           +PIQVNKYLAYSDGMRVIESGK+ST  P  DG LFTE DRPNGQ C++T+EFN+L  M++
Sbjct: 236 IPIQVNKYLAYSDGMRVIESGKISTPAPASDGLLFTEQDRPNGQACLDTKEFNILSKMMQ 295

Query: 295 AVGEERYKDAALWRDRLNQLRAGKNVNNRSWT 326
           AV EERY +AA WRD+L Q RA +N+  R +T
Sbjct: 296 AVDEERYDEAAEWRDKLGQFRAKRNL--RKYT 325


>AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in
           basal defense response 1 | chr1:28281789-28283631
           REVERSE LENGTH=325
          Length = 325

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/332 (66%), Positives = 263/332 (79%), Gaps = 13/332 (3%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVNT 57
           M SVQ P VCP+   +  G C+  ++    ++  RS+F G    G K++     +  +  
Sbjct: 1   MRSVQAPVVCPAIRPRQVGACA-SLVNYTGLK-PRSQFWGNRTKGVKSQG---TTTTITL 55

Query: 58  RKCWTVVRCSFNPSSSND---SENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRHL 114
           R C   ++C F+  S  +   +ENF E DEEYVNSSV+EAVEVKSGADGF++KMRDGR L
Sbjct: 56  RLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQL 115

Query: 115 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTLY 174
           RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+ +V IARPT+Y
Sbjct: 116 RCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTMY 175

Query: 175 QVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRCK 234
           QVVKEM+DKMGYEVRLVRVT+RVHEAYFAQL+L+KVGN +EC +FDLRPSDAINIAVRCK
Sbjct: 176 QVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIAVRCK 235

Query: 235 VPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLK 294
           +PIQVNKYLAYSDGMRVIESGK+ST  P  DG LFTE DRPNGQ C++T+EFN+L  M++
Sbjct: 236 IPIQVNKYLAYSDGMRVIESGKISTPAPASDGLLFTEQDRPNGQACLDTKEFNILSKMMQ 295

Query: 295 AVGEERYKDAALWRDRLNQLRAGKNVNNRSWT 326
           AV EERY +AA WRD+L Q RA +N+  R +T
Sbjct: 296 AVDEERYDEAAEWRDKLGQFRAKRNL--RKYT 325


>AT1G19660.2 | Symbols:  | Wound-responsive family protein |
           chr1:6800361-6802240 REVERSE LENGTH=329
          Length = 329

 Score =  419 bits (1078), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/333 (62%), Positives = 259/333 (77%), Gaps = 11/333 (3%)

Query: 1   MGSVQGPAVCPS----KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVN 56
           M S+Q P VCPS    +L     L        R +R +F G N   +   Q   ++  ++
Sbjct: 1   MRSLQAPVVCPSVRPRQLGVSALLVNCSVSKTRSLRKQFWG-NQTKNDKSQAATVNLRLH 59

Query: 57  TRKCWTVVRCSFNPSSS---NDSENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRH 113
            R+ +  ++C F+  S    + +ENF E DE+YV SSV+EAVEVKSG DGF++KM+DGR 
Sbjct: 60  LRR-YKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118

Query: 114 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTL 173
           LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIVLEMPSVLLMAA+ +V IARPT+
Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTM 178

Query: 174 YQVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRC 233
           YQVVK+M+DKMGYEVRLVRVT RVHEAYFA+LYL+KVG++++C +FDLRPSDAINIAVRC
Sbjct: 179 YQVVKDMVDKMGYEVRLVRVTTRVHEAYFAELYLSKVGDKSDCVSFDLRPSDAINIAVRC 238

Query: 234 KVPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNML 293
           KVPIQVNKYLAYSDGMRVI+SGKLS Q P  DG LFTE+DRPNGQPC +T+EF+L+ NM+
Sbjct: 239 KVPIQVNKYLAYSDGMRVIDSGKLSKQTPASDGLLFTELDRPNGQPCFDTKEFDLVRNMM 298

Query: 294 KAVGEERYKDAALWRDRLNQLRAGKNVNNRSWT 326
           +AV EERY +AA WRD+L + +A + +  R +T
Sbjct: 299 QAVDEERYDEAAEWRDKLGKFQAKRKL--RKYT 329


>AT1G19660.1 | Symbols:  | Wound-responsive family protein |
           chr1:6800361-6802240 REVERSE LENGTH=329
          Length = 329

 Score =  419 bits (1078), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/333 (62%), Positives = 259/333 (77%), Gaps = 11/333 (3%)

Query: 1   MGSVQGPAVCPS----KLAGFCSLPMMGPMNVRCIRSEFLGLNGGGSKAKQRGFLSCDVN 56
           M S+Q P VCPS    +L     L        R +R +F G N   +   Q   ++  ++
Sbjct: 1   MRSLQAPVVCPSVRPRQLGVSALLVNCSVSKTRSLRKQFWG-NQTKNDKSQAATVNLRLH 59

Query: 57  TRKCWTVVRCSFNPSSS---NDSENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDGRH 113
            R+ +  ++C F+  S    + +ENF E DE+YV SSV+EAVEVKSG DGF++KM+DGR 
Sbjct: 60  LRR-YKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118

Query: 114 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIARPTL 173
           LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIVLEMPSVLLMAA+ +V IARPT+
Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTM 178

Query: 174 YQVVKEMIDKMGYEVRLVRVTRRVHEAYFAQLYLTKVGNEAECRTFDLRPSDAINIAVRC 233
           YQVVK+M+DKMGYEVRLVRVT RVHEAYFA+LYL+KVG++++C +FDLRPSDAINIAVRC
Sbjct: 179 YQVVKDMVDKMGYEVRLVRVTTRVHEAYFAELYLSKVGDKSDCVSFDLRPSDAINIAVRC 238

Query: 234 KVPIQVNKYLAYSDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNML 293
           KVPIQVNKYLAYSDGMRVI+SGKLS Q P  DG LFTE+DRPNGQPC +T+EF+L+ NM+
Sbjct: 239 KVPIQVNKYLAYSDGMRVIDSGKLSKQTPASDGLLFTELDRPNGQPCFDTKEFDLVRNMM 298

Query: 294 KAVGEERYKDAALWRDRLNQLRAGKNVNNRSWT 326
           +AV EERY +AA WRD+L + +A + +  R +T
Sbjct: 299 QAVDEERYDEAAEWRDKLGKFQAKRKL--RKYT 329


>AT5G66050.1 | Symbols:  | Wound-responsive family protein |
           chr5:26412333-26414428 REVERSE LENGTH=340
          Length = 340

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 16/195 (8%)

Query: 132 HPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIAR-----PTLYQVVKEMIDKMGY 186
            P I LK+      LLP+IV +     L+    DVP+       P  +Q V  ++DK+GY
Sbjct: 143 QPTIFLKISCDGDYLLPVIVGDAAVEKLL----DVPLQGHTEECPDQFQFVSAVVDKLGY 198

Query: 187 EVRLVRVTRRVHEAYFAQLYLTKVGN-EAECRTFDLRPSDAINIAVRCKVPIQVNKYLAY 245
           EV++V++T R+   Y+A L L K G+ EA C   D RPSDAIN+A  C+ PI VNK +  
Sbjct: 199 EVKMVKLTGRIVNTYYASLCLGKPGDIEAIC--IDSRPSDAINVARACQAPIYVNKAIVL 256

Query: 246 SDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVGEERYKDAA 305
            + +++   G+  +  P F+  L +  D P+      +EE  L+ NM  A  EERY DAA
Sbjct: 257 EEAIKIGYGGRPQSAKPVFNVILDSAPDGPDPL----SEELKLVRNMDLASKEERYIDAA 312

Query: 306 LWRDRLNQLRAGKNV 320
           +WRDRL  L+   +V
Sbjct: 313 MWRDRLKNLQNSSSV 327


>AT5G66050.2 | Symbols:  | Wound-responsive family protein |
           chr5:26412333-26413830 REVERSE LENGTH=246
          Length = 246

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 16/195 (8%)

Query: 132 HPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRDVPIAR-----PTLYQVVKEMIDKMGY 186
            P I LK+      LLP+IV +     L+    DVP+       P  +Q V  ++DK+GY
Sbjct: 49  QPTIFLKISCDGDYLLPVIVGDAAVEKLL----DVPLQGHTEECPDQFQFVSAVVDKLGY 104

Query: 187 EVRLVRVTRRVHEAYFAQLYLTKVGN-EAECRTFDLRPSDAINIAVRCKVPIQVNKYLAY 245
           EV++V++T R+   Y+A L L K G+ EA C   D RPSDAIN+A  C+ PI VNK +  
Sbjct: 105 EVKMVKLTGRIVNTYYASLCLGKPGDIEAIC--IDSRPSDAINVARACQAPIYVNKAIVL 162

Query: 246 SDGMRVIESGKLSTQFPGFDGRLFTEMDRPNGQPCVETEEFNLLHNMLKAVGEERYKDAA 305
            + +++   G+  +  P F+  L +  D P+      +EE  L+ NM  A  EERY DAA
Sbjct: 163 EEAIKIGYGGRPQSAKPVFNVILDSAPDGPDPL----SEELKLVRNMDLASKEERYIDAA 218

Query: 306 LWRDRLNQLRAGKNV 320
           +WRDRL  L+   +V
Sbjct: 219 MWRDRLKNLQNSSSV 233