Miyakogusa Predicted Gene

Lj5g3v0107110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0107110.1 Non Chatacterized Hit- tr|K3XVK5|K3XVK5_SETIT
Uncharacterized protein OS=Setaria italica GN=Si005963,32.99,3e-18,
,CUFF.52544.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36550.1 | Symbols:  | ARM repeat superfamily protein | chr4:...   130   8e-31
AT1G67530.2 | Symbols:  | ARM repeat superfamily protein | chr1:...   114   6e-26
AT1G67530.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   114   6e-26
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97...   109   1e-24
AT1G24330.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   108   3e-24

>AT4G36550.1 | Symbols:  | ARM repeat superfamily protein |
           chr4:17245400-17247926 REVERSE LENGTH=718
          Length = 718

 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 108/170 (63%), Gaps = 2/170 (1%)

Query: 22  KVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSESSQ 81
           K++ S+C+EL   + RI+ +  DIE ARP C+  +Q LC LH  LDK K ++++CSESS+
Sbjct: 14  KMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCSESSK 73

Query: 82  LYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAEEE 141
           LY+ +T + IL+R  + + + E  L  I++ VP  L  +IS I++DLR T+ +LEF+EEE
Sbjct: 74  LYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEFSEEE 133

Query: 142 ARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLK 191
           A K +  + +K+   S S +  E++    A L+L + +   ++ E+ +LK
Sbjct: 134 AGKAIRELMQKSTSSSASPD--EIKDFHYAALKLQLSTPEAIVTERRSLK 181


>AT1G67530.2 | Symbols:  | ARM repeat superfamily protein |
           chr1:25308229-25311081 FORWARD LENGTH=782
          Length = 782

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 108/184 (58%)

Query: 9   TTLQITIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDK 68
           T L+  + +  + K++  +C EL G + ++L +   +E ARP     +QALCSLH  L+K
Sbjct: 4   TELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIALEK 63

Query: 69  AKSVIKHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDL 128
           AK++++HCSE S+LYL IT + +L + EK + A    L ++++ VP  + ++I  I+ +L
Sbjct: 64  AKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVGEL 123

Query: 129 RDTEFSLEFAEEEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKA 188
            +T F L+ +E+E    ++++ ++        +N ELE    A  RL+I SS   L E+ 
Sbjct: 124 ENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERR 183

Query: 189 TLKR 192
            LK+
Sbjct: 184 ALKK 187


>AT1G67530.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:25308229-25311081 FORWARD LENGTH=782
          Length = 782

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 108/184 (58%)

Query: 9   TTLQITIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDK 68
           T L+  + +  + K++  +C EL G + ++L +   +E ARP     +QALCSLH  L+K
Sbjct: 4   TELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIALEK 63

Query: 69  AKSVIKHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDL 128
           AK++++HCSE S+LYL IT + +L + EK + A    L ++++ VP  + ++I  I+ +L
Sbjct: 64  AKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVGEL 123

Query: 129 RDTEFSLEFAEEEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKA 188
            +T F L+ +E+E    ++++ ++        +N ELE    A  RL+I SS   L E+ 
Sbjct: 124 ENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERR 183

Query: 189 TLKR 192
            LK+
Sbjct: 184 ALKK 187


>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
           chr1:9720962-9723975 REVERSE LENGTH=768
          Length = 768

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 102/173 (58%)

Query: 20  EVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSES 79
           + K++  +C  L     +I+ +   +E+ARP     +QALCSLH  L+K K++++HC+ES
Sbjct: 15  DAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVVLEKVKNILRHCTES 74

Query: 80  SQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAE 139
           S+LYL IT + ++ + EK +S+    L ++++ V   + +++  IL +L +TEFSL+ AE
Sbjct: 75  SKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEILMELENTEFSLDPAE 134

Query: 140 EEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKR 192
           +E    ++ + ++      S +N ELE    A  RL I SS   L E+  LK+
Sbjct: 135 KEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKK 187


>AT1G24330.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:8631779-8634835 FORWARD LENGTH=771
          Length = 771

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 101/173 (58%)

Query: 20  EVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSES 79
           + K++  +C EL     ++L +   +E ARP     +Q LCSLH  L+KAK++++HCSE 
Sbjct: 15  DAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIALEKAKNILQHCSEC 74

Query: 80  SQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAE 139
           S+LYL IT + +L + EK +SA    L ++++ VP  + ++I  I+ +L  T+F L+ +E
Sbjct: 75  SKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVGELEHTKFLLDPSE 134

Query: 140 EEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKR 192
           +E    ++++ ++        ++ ELE    A  RL+I SS   L E+  LK+
Sbjct: 135 KEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKK 187