Miyakogusa Predicted Gene
- Lj5g3v0104750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0104750.1 Non Chatacterized Hit- tr|D8RIM8|D8RIM8_SELML
Putative uncharacterized protein (Fragment) OS=Selagin,26.98,2e-18,no
description,Tetratricopeptide-like helical; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopepti,CUFF.52524.1
(525 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 333 1e-91
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 170 3e-42
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 6e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 6e-41
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 162 7e-40
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 8e-40
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 1e-38
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 8e-38
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 9e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 150 3e-36
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 150 3e-36
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 7e-36
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 1e-35
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 7e-35
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 7e-35
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 140 2e-33
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 8e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 9e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 8e-29
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 122 7e-28
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 122 7e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 2e-27
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 4e-27
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 116 4e-26
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 113 3e-25
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 111 1e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 110 2e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 110 3e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 4e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 108 6e-24
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 106 5e-23
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 103 3e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 102 7e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 101 2e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 92 9e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 1e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 80 4e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 79 6e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 78 2e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 74 2e-13
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 73 4e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 68 1e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 64 2e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 3e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 63 6e-10
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 62 1e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 60 5e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 59 9e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 58 1e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 2e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 57 3e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 56 5e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 55 1e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 55 1e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 55 2e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 54 2e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 53 4e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 51 2e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 51 2e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 51 2e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 51 2e-06
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 49 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 298/538 (55%), Gaps = 42/538 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A + ++M KG P+ TY LI +C+ + K+ R M +G P+L +YN VI
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G EV+ +L EM RG + D V+Y +I E +A M +M G
Sbjct: 284 GLCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYC--KEGNFHQALVMHAEMLRHG 340
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P +TY LI ++C G ++ A + +M RG P+E TY L++ + +G ++A
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG-LCPNERTYTTLVDGFSQKGYMNEA 399
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ + EM GFSPS+VTYNALI G+C G++++A+ + M E GLSPD V
Sbjct: 400 YRVLREMND--------NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL-------------- 289
SY V+SG C+ + +A +K EM +K + + TY +L++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKG--IKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 290 --------SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIA 341
DE TY++LIN Y +GDLEKA QL M G L D VT SVL+NGLNK +
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 342 RTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVK----VAIKA 397
RT EAK LL F +P+ + Y TLIENCSN EFK +V F +K A +
Sbjct: 570 RTREAKRLLLK--LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 398 HHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
+ML N+KPDGT YN++I H R+ ++ KAY +Y EMV GF+ H +V+AL+KALH
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Query: 458 DGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTALLDVLSEIAMDGLLLDG 515
+G+ NE++ VI + LRSC LS++E KVL EI+ + M +LDVL+E+A DG L +G
Sbjct: 688 EGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 186/352 (52%), Gaps = 26/352 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A E L++M +GL P+ERTYT L+ F Q+ ++A +V REM D GFSPS+ TYNA
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G +E A+ +L +M E+GL+ D VSY V+ + + +A +K++M
Sbjct: 421 LINGHCVTGK-MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD--VDEALRVKREMV 477
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+KGI PD++TY LI C R EA DL+ EML R G PDE TY L+N YC++G+
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDL 536
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
KA LH+EMV KG LPD +VTY+ LI G R +EA + + P
Sbjct: 537 EKALQLHNEMVEKGVLPD--------VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 241 DTVSYRQVISGLCKIR-----EPVKAYELKLEMDKKRSCLSLNEDTYETLM--EQLSDED 293
V+Y +I I +K + +K M + + +E+++ D
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA-------DQVFESMLGKNHKPDGT 641
Query: 294 TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
Y+ +I+ + GD+ KAY L M G+L VT+ L+ L+K + E
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 126/315 (40%), Gaps = 48/315 (15%)
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
SP++ TYN LI G+C G + AL +F M G P+ V+Y +I G CK+R+ ++
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 264 LKLEMDKK-------RSCLSLNEDTYETLMEQLS-------------DEDTYSSLINDYL 303
L M K + +N E M+++S DE TY++LI Y
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM-P 362
+G+ +A + M G +T + L++ + K A +L R G+ P
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ---MRVRGLCP 378
Query: 363 AYIIYDTLIENCSN----NEFKRLV--------------------GPAITFSVKVAIKAH 398
Y TL++ S NE R++ G +T ++ AI
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 399 HTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYD 458
M PD Y+ ++ RS +V +A + EMV G P + +LI+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 459 GRYNEMSWVIHNTLR 473
R E + LR
Sbjct: 499 RRTKEACDLYEEMLR 513
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 222/486 (45%), Gaps = 52/486 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA ++++M G P T+T L+H Q ++AS+AV + M+ +G P L TY A
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
VI N G ++AL +L +M + + AD V Y VI +L + A + +M
Sbjct: 211 VI--NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC--KYRHVDDALNLFTEM 266
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D+KGI PD TY LI LC GR S+A L +ML R +P+ T+ +L++ + +G+
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGK 325
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A L EM+ + P++VTYN+LI G+C R+ EA +IF M
Sbjct: 326 LIEAEKLFDEMIQRSI--------DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME---QLSDED--- 293
PD V+Y +I+G CK ++ V EL +M R L N TY TL+ Q SD D
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDM--SRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 294 ----------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
TY++L++ G LEKA + + D T +++ G+
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 338 NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKA 397
K A E W L ++ + P I Y+T+I K A T +K
Sbjct: 496 CK-AGKVEDGWDLFCSLSLKGVK-PDVIAYNTMISGFCKKGLKE---EAYTLFIK----- 545
Query: 398 HHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
M PD YN LI H R + + + EM F S L+ + +
Sbjct: 546 ---MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA-STYGLVTDMLH 601
Query: 458 DGRYNE 463
DGR ++
Sbjct: 602 DGRLDK 607
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 163/392 (41%), Gaps = 61/392 (15%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDL---FREMLHRGGFSPDE 164
KL +A ++ +M P V + L+ + + + FDL F E + G S +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK----FDLVISFGEKMEILGVSHNL 100
Query: 165 HTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQ 224
+TY ++NC C + + S A + +M+ G+ PS+VT N+L+ G+C R+
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMK--------LGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS----------- 273
EA+ + M EMG PDTV++ ++ GL + + +A L M K
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 274 ---CLSLNEDTYETLMEQL------SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
C D L+ ++ +D YS++I+ ++ A L M + G
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNN----EFK 380
D T S L++ L R ++A LL + R P + +++LI+ + E +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASR-LLSDMLERKIN-PNVVTFNSLIDAFAKEGKLIEAE 330
Query: 381 RLVGPAITFSVKVAIKAHHTMLHG--------------------NYKPDGTVYNLLIFDH 420
+L I S+ I ++++++G + PD YN LI
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 421 SRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
++ +V ++ +M G V + + LI
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 121/331 (36%), Gaps = 74/331 (22%)
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTG 202
+L EA DLF EM+ F P + L++ +F +M + G
Sbjct: 45 KLDEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKME--------ILG 95
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
S +L TYN +I C ++ AL I M ++G P V
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIV------------------- 136
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDG 322
T +SL+N + + +A L M G
Sbjct: 137 -------------------------------TLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 323 YLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKR 381
Y D VT + L++GL + + +EA + V C P + Y +I C E
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC--QPDLVTYGAVINGLCKRGE--- 220
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
+A+ + M G + D +Y+ +I + V A N++ EM + G
Sbjct: 221 ---------PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 442 VPHMFSVLALIKALHYDGRYNEMSWVIHNTL 472
P +F+ +LI L GR+++ S ++ + L
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 221/460 (48%), Gaps = 51/460 (11%)
Query: 3 EAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+A ++EM ++ G P + T+ L++ C+ A+++ M+ G+ P + TYN+V
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I G ++ A+E+L +M R + + V+Y +I L E ++ +A E+ + +
Sbjct: 337 ISGLCKLGE-VKEAVEVLDQMITRDCSPNTVTYNTLISTLC--KENQVEEATELARVLTS 393
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
KGILPD T+ LI LC A +LF EM +G PDE TY L++ C +G+
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLD 452
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A ++ +M ++G + S++TYN LI G+C + +EA EIF M G+S +
Sbjct: 453 EALNMLKQME--------LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME-QLSDEDTYSSLIN 300
+V+Y +I GLCK R A +L +M +ME Q D+ TY+SL+
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQM----------------IMEGQKPDKYTYNSLLT 548
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
+ GD++KA + M +G D VT L++GL K R E LL ++ +
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR-VEVASKLLRSIQMKGIN 607
Query: 361 MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH 420
+ + Y+ +I+ F++ AI ML N P V ++F
Sbjct: 608 LTPH-AYNPVIQGL----FRKR-------KTTEAINLFREMLEQNEAPPDAVSYRIVF-- 653
Query: 421 SRSL-----EVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
R L + +A + +E++ GFVP S+ L + L
Sbjct: 654 -RGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 135/552 (24%), Positives = 223/552 (40%), Gaps = 64/552 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR-GFSPSLDTYNAV 61
+ +++LE+M T+ LI S+ Q + + V MID G P YN +
Sbjct: 101 DMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRM 160
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ G +++ +M G+ D ++ +I AL +L A M +DM
Sbjct: 161 LNL-LVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRA--HQLRPAILMLEDMPS 217
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G++PD T+ ++ G L A + RE + G S + +++ +C +G
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRI-REQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
A + EM ++ GF P T+N L+ G C G V+ A+EI M + G PD
Sbjct: 277 DALNFIQEMSNQD-------GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED-------- 293
+Y VISGLCK+ E +A E+ L+ R C S N TY TL+ L E+
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEV-LDQMITRDC-SPNTVTYNTLISTLCKENQVEEATEL 387
Query: 294 --------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
T++SLI + A +L M G D T ++L++ L
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 340 IARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKR----------------- 381
+ EA L C + I Y+TLI+ C N+ +
Sbjct: 448 KGKLDEALNMLKQMELSGC--ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 382 ------LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYME 435
+ G + V+ A + M+ KPD YN L+ R ++ KA ++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 436 MVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN-TLRSCNLSDSELLKVLNEIDFSKP 494
M G P + + LI L GR S ++ + ++ NL+ V+ + F K
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL-FRKR 624
Query: 495 EMTALLDVLSEI 506
+ T +++ E+
Sbjct: 625 KTTEAINLFREM 636
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +L++M G TY LI FC+ ++ +A ++F EM G S + TYN
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I +E A +++ +M G D +Y ++ + K KA ++ + M
Sbjct: 511 LID-GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK--KAADIVQAMT 567
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRG-GFSPDEHTYFNLMNCYCLQGE 179
G PD VTY LI LC GR+ A L R + +G +P H Y ++ + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP--HAYNPVIQGLFRKRK 625
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCS-LGRVQEALEIFRGMPEMGL 238
++A +L EM+ + P P V+Y + G C+ G ++EA++ + E G
Sbjct: 626 TTEAINLFREMLEQNEAP-------PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 239 SPDTVSYRQVISGL 252
P+ S + GL
Sbjct: 679 VPEFSSLYMLAEGL 692
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 221/490 (45%), Gaps = 60/490 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA E+++ M G P T L++ C + ++A+ + +M++ G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V+ +G +A+E+LR+M ER + DAV Y +I L L AF + +M+
Sbjct: 234 VLNVMCKSGQ-TALAMELLRKMEERNIKLDAVKYSIIIDGLC--KHGSLDNAFNLFNEME 290
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KGI + +TY +LI C GR + L R+M+ R +P+ T+ L++ + +G+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKL 349
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
+A LH EM+H+G PD +T G P++ T+N L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I GYC R+ + LE+FR M G+ DTV+Y +I G C++ + A EL EM ++
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK- 468
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+ N TY+ L++ L D G+ EKA ++ + D +++
Sbjct: 469 -VPPNIVTYKILLDGLCD-------------NGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKV 393
++G+ ++ +A W L ++ + P Y+ +I GP +
Sbjct: 515 IHGMCNASKVDDA-WDLFCSLPLKGVK-PGVKTYNIMIGGLCKK------GP-----LSE 561
Query: 394 AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
A M + PDG YN+LI H + K+ + E+ GF ++ +I
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 454 ALHYDGRYNE 463
L DGR +
Sbjct: 622 MLS-DGRLKK 630
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 151/391 (38%), Gaps = 72/391 (18%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
K A ++ +DM LP + + L + + L ++M +G + + +T
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG-IAHNLYTL 126
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
++NC+C + AF +++ G+ P+ +T++ LI G C GRV EAL
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIK--------LGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK----------------- 270
E+ M EMG PD ++ +++GLC K E L +DK
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCL---SGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 271 KRSCLSLNEDTYETLMEQLSDEDT------YSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
C S L+ ++ + + YS +I+ G L+ A+ L M G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVG 384
++ +T ++L+ G R + A ++ D + KR +
Sbjct: 296 TNIITYNILIGGFCNAGRWDDG----------------AKLLRDMI---------KRKIN 330
Query: 385 P-AITFSVKV-----------AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNM 432
P +TFSV + A + H M+H PD Y LI + + KA M
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 433 YMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
MV G P++ + LI R ++
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 218/490 (44%), Gaps = 60/490 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA E+++ M G P T L++ C + S AV + M++ GF P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V++ +G +A+E+LR+M ER + DAV Y +I L + L AF + +M+
Sbjct: 218 VLKVMCKSGQ-TALAMELLRKMEERKIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEME 274
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG D + Y LI C+ GR + L R+M+ R +PD + L++C+ +G+
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKL 333
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
+A LH EM+ +G PD VT G P++ T+N L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I GYC + + LE+FR M G+ DTV+Y +I G C++ + A EL EM +R
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR- 452
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+ + +Y+ L++ L D G+ EKA ++ + D +++
Sbjct: 453 -VRPDIVSYKILLDGLCD-------------NGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKV 393
++G+ ++ +A W L ++ + P Y+ +I G S+
Sbjct: 499 IHGMCNASKVDDA-WDLFCSLPLKGV-KPDVKTYNIMIG-----------GLCKKGSLSE 545
Query: 394 AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
A M + P+G YN+LI H + K+ + E+ GF +V ++
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Query: 454 ALHYDGRYNE 463
L DGR +
Sbjct: 606 MLS-DGRLKK 614
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 186/451 (41%), Gaps = 65/451 (14%)
Query: 39 AVKVFREMIDRGFSPSL----DTYNAVIQTNAFAGTGIEVALEILREMPERGL-----TA 89
AV +F+EM P L ++ V +T + ++ L++ ++M +G+ T
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQY-----DLVLDLCKQMELKGIAHNLYTL 110
Query: 90 DAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD 149
+ C C L +GK ++ G PD+VT+ LI+ LC GR+SEA +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKL-------GYEPDTVTFSTLINGLCLEGRVSEALE 163
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
L M+ G P T L+N CL G+ S A L MV TGF P+ VT
Sbjct: 164 LVDRMVEM-GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE--------TGFQPNEVT 214
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
Y ++ C G+ A+E+ R M E + D V Y +I GLCK A+ L EM+
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 270 KK-------------RS-CLSLNEDTYETLMEQL------SDEDTYSSLINDYLAQGDLE 309
K R C + D L+ + D +S+LI+ ++ +G L
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDT 369
+A +L M G D VT + L++G K + +A L V C P ++
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNI 392
Query: 370 LIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHK 428
LI C N L+ + K++++ D YN LI ++
Sbjct: 393 LINGYCKAN----LIDDGLELFRKMSLRG--------VVADTVTYNTLIQGFCELGKLEV 440
Query: 429 AYNMYMEMVHYGFVPHMFSVLALIKALHYDG 459
A ++ EMV P + S L+ L +G
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 220/508 (43%), Gaps = 44/508 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +L M KG TP +Y+ +++ +C+ K K+ M +G P+ Y +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I E A E EM +G+ D V Y +I + + F +M
Sbjct: 322 IIGLLCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY--EMH 378
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I PD +TY +I C +G + EA LF EM + G PD T+ L+N YC G
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
AF +H+ M+ G SP++VTY LI G C G + A E+ M ++GL P
Sbjct: 438 KDAFRVHNHMIQ--------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ +Y +++GLCK +A +L E + LN DT TY++L++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA----GLNADTV-----------TYTTLMD 534
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
Y G+++KA ++ M G VT +VL+NG + + L W + G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML---AKG 591
Query: 361 M-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIF 418
+ P +++L++ C N ++K A + M PDG Y L+
Sbjct: 592 IAPNATTFNSLVKQYCIRN------------NLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
H ++ + +A+ ++ EM GF + + LIK ++ E V R +
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 479 DSELLKVLNEIDFSKPEMTALLDVLSEI 506
D E+ ++ + ++D + EI
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 153/372 (41%), Gaps = 43/372 (11%)
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTG 202
+ + A +FRE G + +Y +++ C G +A HL M KG+ PD
Sbjct: 226 KTATAIIVFRE-FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD---- 280
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
+++Y+ ++ GYC G + + ++ M GL P++ Y +I LC+I + +A
Sbjct: 281 ----VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA- 335
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
E+ + ++ Q L D Y++LI+ + +GD+ A + Y M
Sbjct: 336 ----------------EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 321 DGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIENCSNNEF 379
D +T + +++G +I EA L +F C G+ P + + LI
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMF--CKGLEPDSVTFTELIN------- 429
Query: 380 KRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHY 439
G +K A + H+ M+ P+ Y LI + ++ A + EM
Sbjct: 430 ----GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 440 GFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTAL 499
G P++F+ +++ L G E ++ + +D+ L + EM
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 500 LDVLSEIAMDGL 511
++L E+ GL
Sbjct: 546 QEILKEMLGKGL 557
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 220/508 (43%), Gaps = 44/508 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +L M KG TP +Y+ +++ +C+ K K+ M +G P+ Y +
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I E A E EM +G+ D V Y +I + + F +M
Sbjct: 322 IIGLLCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY--EMH 378
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I PD +TY +I C +G + EA LF EM + G PD T+ L+N YC G
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
AF +H+ M+ G SP++VTY LI G C G + A E+ M ++GL P
Sbjct: 438 KDAFRVHNHMIQ--------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ +Y +++GLCK +A +L E + LN DT TY++L++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA----GLNADTV-----------TYTTLMD 534
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
Y G+++KA ++ M G VT +VL+NG + + L W + G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML---AKG 591
Query: 361 M-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIF 418
+ P +++L++ C N ++K A + M PDG Y L+
Sbjct: 592 IAPNATTFNSLVKQYCIRN------------NLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
H ++ + +A+ ++ EM GF + + LIK ++ E V R +
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 479 DSELLKVLNEIDFSKPEMTALLDVLSEI 506
D E+ ++ + ++D + EI
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 153/372 (41%), Gaps = 43/372 (11%)
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTG 202
+ + A +FRE G + +Y +++ C G +A HL M KG+ PD
Sbjct: 226 KTATAIIVFRE-FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD---- 280
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
+++Y+ ++ GYC G + + ++ M GL P++ Y +I LC+I + +A
Sbjct: 281 ----VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA- 335
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
E+ + ++ Q L D Y++LI+ + +GD+ A + Y M
Sbjct: 336 ----------------EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 321 DGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIENCSNNEF 379
D +T + +++G +I EA L +F C G+ P + + LI
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMF--CKGLEPDSVTFTELIN------- 429
Query: 380 KRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHY 439
G +K A + H+ M+ P+ Y LI + ++ A + EM
Sbjct: 430 ----GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 440 GFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTAL 499
G P++F+ +++ L G E ++ + +D+ L + EM
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 500 LDVLSEIAMDGL 511
++L E+ GL
Sbjct: 546 QEILKEMLGKGL 557
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 218/477 (45%), Gaps = 71/477 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ AE + EM +K L P TYT L+ +C + + +KA++++ EM +G +PS+ T+
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ + F I A+++ EM E + + V+Y +I E + KAFE K+M
Sbjct: 513 LL-SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC--EEGDMSKAFEFLKEMT 569
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+KGI+PD+ +Y LI LC G+ SEA +F + LH+G +E Y L++ +C +G+
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
+A + EMV +G D V G P V Y ++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I G +EA I+ M G P+ V+Y VI+GLCK +A L +M S
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQG--DLEKAYQLDYVMGHDGYLSDNVTLS 331
+ ++ TY + D L +G D++KA +L + G L++ T +
Sbjct: 749 ---------------VPNQVTYGCFL-DILTKGEVDMQKAVELHNAI-LKGLLANTATYN 791
Query: 332 VLLNGLNKIARTTEAKWYLLWTVFFRCFG---MPAYIIYDTLI-ENCSNNEFKRLVGPAI 387
+L+ G + R EA + R G P I Y T+I E C N+ K+
Sbjct: 792 MLIRGFCRQGRIEEAS-----ELITRMIGDGVSPDCITYTTMINELCRRNDVKK------ 840
Query: 388 TFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
AI+ ++M +PD YN LI + E+ KA + EM+ G +P+
Sbjct: 841 ------AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 208/480 (43%), Gaps = 59/480 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EAE + + M GL P++ TY+ LI FC+ + A+ EM+D G S+ YN++I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G I A + EM + L V+Y ++ + K+ KA + +M K
Sbjct: 445 NGHCKFGD-ISAAEGFMAEMINKKLEPTVVTYTSLMGGYC--SKGKINKALRLYHEMTGK 501
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI P T+ L+ L G + +A LF EM P+ TY ++ YC +G+ SK
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 183 AFHLHHEMVHKGFLPD----------------------FVTGFSP-----SLVTYNALIY 215
AF EM KG +PD FV G + + Y L++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCL 275
G+C G+++EAL + + M + G+ D V Y +I G K ++ + L EM +
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR---- 676
Query: 276 SLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN 335
D+ Y+S+I+ GD ++A+ + +M ++G + + VT + ++N
Sbjct: 677 -----------GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 336 GLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAI 395
GL K EA+ +L + +P + Y ++ + E ++ A+
Sbjct: 726 GLCKAGFVNEAE--VLCSKMQPVSSVPNQVTYGCFLDILTKGE----------VDMQKAV 773
Query: 396 KAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
+ H+ +L G T YN+LI R + +A + M+ G P + +I L
Sbjct: 774 ELHNAILKGLLANTAT-YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 216/488 (44%), Gaps = 59/488 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + +++ K L P TY L++ C+ +++ EM+ FSPS ++++
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G IE AL +++ + + G++ + Y +I +L K +A + M
Sbjct: 340 EGLRKRGK-IEEALNLVKRVVDFGVSPNLFVYNALIDSLC--KGRKFHEAELLFDRMGKI 396
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ P+ VTY +LID C G+L A EM+ G + Y +L+N +C G+ S
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISA 455
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A EM++K P++VTY +L+ GYCS G++ +AL ++ M G++P
Sbjct: 456 AEGFMAEMINK--------KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 243 VSYRQVISGLCK---IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
++ ++SGL + IR+ VK + E + K + TY+ +I
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK------------------PNRVTYNVMI 549
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
Y +GD+ KA++ M G + D + L++GL + +EAK ++ C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC- 608
Query: 360 GMPAYIIYDTLIEN-CSNNEFKRLVGPA---ITFSVKVAIKAHHTMLHGN---------- 405
I Y L+ C + + + + V + + + ++ G+
Sbjct: 609 -ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 406 ----------YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
KPD +Y +I S++ + +A+ ++ M++ G VP+ + A+I L
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 456 HYDGRYNE 463
G NE
Sbjct: 728 CKAGFVNE 735
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 166/357 (46%), Gaps = 48/357 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M++A E L+EM KG+ P +Y LIH C +AS+A KVF + + +G + L+
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKG-NCELNEICY 615
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+ F G +E AL + +EM +RG+ D V Y +I L + KL F + K+M
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL--FFGLLKEM 673
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D+G+ PD V Y +ID G EAF ++ M++ G P+E TY ++N C G
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-PNEVTYTAVINGLCKAGF 732
Query: 180 FSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNA 212
++A L +M +P+ VT G + TYN
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C GR++EA E+ M G+SPD ++Y +I+ LC+ + KA EL M +K
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK- 851
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
D Y++LI+ G++ KA +L M G + +N T
Sbjct: 852 --------------GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 193/468 (41%), Gaps = 80/468 (17%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVA 75
L P RT + L+H + A+++F +M+ G P + Y VI++ + A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL-KDLSRA 246
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
E++ M G + V Y +I L ++K+ +A +KKD+ K + PD VTY L+
Sbjct: 247 KEMIAHMEATGCDVNIVPYNVLIDGLC--KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
LC V ++ EML FSP E +L+ +G+ +A +L +V
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV---- 359
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI 255
DF G SP+L YNALI C + EA +F M ++GL P+ V+Y +I C+
Sbjct: 360 --DF--GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 256 REPVKAYELKLEMDKKRSCLSL--------------NEDTYETLMEQLSDED------TY 295
+ A EM LS+ + E M ++ ++ TY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF 355
+SL+ Y ++G + KA +L + M G T + LL+GL
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL------------------ 517
Query: 356 FRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNL 415
FR A +I D A+K + M N KP+ YN+
Sbjct: 518 FR-----AGLIRD-------------------------AVKLFNEMAEWNVKPNRVTYNV 547
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
+I + ++ KA+ EM G VP +S LI L G+ +E
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 12/244 (4%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+L+EM+ +GL P + YT +I + + +A ++ MI+ G P+ TY AVI
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
AG E + + P + C + +L E + KA E+ + KG+L
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL--DILTKGEVDMQKAVELHNAIL-KGLLA 785
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
++ TY +LI C GR+ EA +L M+ G SPD TY ++N C + + KA L
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIG-DGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
+ M KG PD V YN LI+G C G + +A E+ M GL P+ + R
Sbjct: 845 WNSMTEKGIRPD--------RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Query: 247 QVIS 250
S
Sbjct: 897 TTTS 900
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 174/416 (41%), Gaps = 52/416 (12%)
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+LP+ T L+ L A +LF +M+ G PD + Y ++ C + S+A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG-IRPDVYIYTGVIRSLCELKDLSRA 246
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ M TG ++V YN LI G C +V EA+ I + + L PD V
Sbjct: 247 KEMIAHME--------ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y ++ GLCK++E +E+ LEM + CL + E SSL+
Sbjct: 299 TYCTLVYGLCKVQE----FEIGLEMMDEMLCLRFS-----------PSEAAVSSLVEGLR 343
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
+G +E+A L + G + + L++ L K + EA+ LL+ + P
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE--LLFDRMGKIGLRPN 401
Query: 364 YIIYDTLIEN-CSNNEFK---RLVGPAITFSVKVAIKAHHTMLHGNYK------------ 407
+ Y LI+ C + +G + +K+++ ++++++G+ K
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 408 --------PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDG 459
P Y L+ + +++KA +Y EM G P +++ L+ L G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 460 RYNEMSWVIHNTLRSCNLSDSELL-KVLNEIDFSKPEMTALLDVLSEIAMDGLLLD 514
+ + + N + N+ + + V+ E + +M+ + L E+ G++ D
Sbjct: 522 LIRD-AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIE 73
KGL + TY LI FC++ R +A ++ MI G SP TY +I ++
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN-ELCRRNDVK 839
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
A+E+ M E+G+ D V+Y +I + E +GKA E++ +M +G++P++ T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE--MGKATELRNEMLRQGLIPNNKTSRT 897
Query: 134 LIDN 137
N
Sbjct: 898 TTSN 901
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 243/554 (43%), Gaps = 68/554 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E ++V EM + P+ TY +++ +C+ +A + ++++ G P TY ++I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
++ A ++ EMP +G + V+Y H+I L + ++ +A ++ M D
Sbjct: 261 MGYC-QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA--RRIDEAMDLFVKMKDD 317
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
P TY VLI +LC R SEA +L +EM G P+ HTY L++ C Q +F K
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L +M+ KG +P+ ++TYNALI GYC G +++A+++ M LSP+T
Sbjct: 377 ARELLGQMLEKGLMPN--------VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKK-------------RSCLSLNEDTYETLMEQL 289
+Y ++I G CK L +++K C S N D+ L+ +
Sbjct: 429 RTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 290 SDED------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIART 343
+D TY+S+I+ +E+A L + G + V + L++G K +
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 344 TEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRL---------VGPAITFSVKV 393
EA L + C +P + ++ LI C++ + K +G T S
Sbjct: 549 DEAHLMLEKMLSKNC--LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 394 --------------AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHY 439
A ML KPD Y I + R + A +M +M
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 440 GFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSE-----LLKVLNEIDFSK- 493
G P +F+ +LIK G+ N ++ + +R S+ L+K L E+ + K
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTN-FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 494 ----PEMTALLDVL 503
PE+ A+ +++
Sbjct: 726 KGSEPELCAMSNMM 739
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 236/544 (43%), Gaps = 79/544 (14%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+EA +++EM G+ P+ TYT LI S C + + KA ++ +M+++G P++ TYNA+
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I N + G IE A++++ M R L+ + +Y +I + + KA + M
Sbjct: 400 I--NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC---KSNVHKAMGVLNKML 454
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
++ +LPD VTY LID C G A+ L M R G PD+ TY ++++ C
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRV 513
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A L + K G +P++V Y ALI GYC G+V EA + M P
Sbjct: 514 EEACDLFDSLEQK--------GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDT---------------YETL 285
+++++ +I GLC + +A L+ +M K +++ DT Y
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 286 MEQLS-----DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
+ LS D TY++ I Y +G L A + M +G D T S L+ G +
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 341 ARTTEA----------------------KWYLLWTVFFRCFG-------MPAYIIYDTLI 371
+T A +LL + + G M + +DT++
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 372 E------------NCSNNEFKRLVGPAITFSVKVAIKA-HHTMLHGNYKPDGTVYNLLIF 418
E N + E K ++G +++VA K H + P V+N L+
Sbjct: 746 ELLEKMVEHSVTPNAKSYE-KLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
+ + ++A + +M+ G +P + S LI L+ G + V N L+ C
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ-CGYY 863
Query: 479 DSEL 482
+ EL
Sbjct: 864 EDEL 867
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 37/366 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +LE+M K P+ T+ LIH C + + +A + +M+ G P++ T +I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ A ++M G DA +Y I E +L A +M M +
Sbjct: 610 H-RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC--REGRLLDAEDMMAKMREN 666
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ PD TY LI +G+ + AFD+ + M G P +HT+ +L+ + L+ ++ K
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-RDTGCEPSQHTFLSLIK-HLLEMKYGK 724
Query: 183 AFHLHHEMVHKGFLPDFVT-----------GFSPSLVTYNALIYGYCSLGRVQEALEIFR 231
E+ + +F T +P+ +Y LI G C +G ++ A ++F
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 232 GMPEM-GLSPDTVSYRQVISGLCKIREPVKAYELKLEM------DKKRSCLSL------- 277
M G+SP + + ++S CK+++ +A ++ +M + SC L
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 278 -----NEDTYETLME--QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTL 330
++ L++ DE + +I+ QG +E Y+L VM +G + T
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 331 SVLLNG 336
S+L+ G
Sbjct: 905 SLLIEG 910
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 33/303 (10%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
++M G P TYT I ++C+E R A + +M + G SP L TY+++I+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 68 AGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---------------- 111
G A ++L+ M + G ++ +I LL E K GK
Sbjct: 685 LGQ-TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL---EMKYGKQKGSEPELCAMSNMME 740
Query: 112 ---AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYF 168
E+ + M + + P++ +YE LI +C VG L A +F M G SP E +
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 169 NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALE 228
L++C C + ++A + +M+ G L P L + LI G G +
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHL--------PQLESCKVLICGLYKKGEKERGTS 852
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ 288
+F+ + + G D ++++ +I G+ K YEL + +K C + TY L+E
Sbjct: 853 VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL-FNVMEKNGC-KFSSQTYSLLIEG 910
Query: 289 LSD 291
D
Sbjct: 911 PPD 913
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 143/524 (27%), Positives = 224/524 (42%), Gaps = 78/524 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A L +M G + +Y LIH + ++A++V+R MI GF PSL TY++
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228
Query: 61 VIQTNAFAGTG----IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
++ G G I+ + +L+EM GL + Y IC +L K+ +A+E+
Sbjct: 229 LM-----VGLGKRRDIDSVMGLLKEMETLGLKPNV--YTFTICIRVLGRAGKINEAYEIL 281
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
K MDD+G PD VTY VLID LC +L A ++F +M G PD TY L++ +
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSD 340
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVT 209
+ EM G +PD VT G P+L T
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
YN LI G + R+ +ALE+F M +G+ P +Y I K + V A E +M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 270 KK----------RSCLSLNEDTYETLMEQL----------SDEDTYSSLINDYLAQGDLE 309
K S SL + + +Q+ D TY+ ++ Y G+++
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM---PAYII 366
+A +L M +G D + ++ L+N L K R EA W +F R M P +
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA-----WKMFMRMKEMKLKPTVVT 575
Query: 367 YDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEV 426
Y+TL+ N ++ AI+ M+ P+ +N L ++ EV
Sbjct: 576 YNTLLAGLGKNG-----------KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 427 HKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
A M +M+ G VP +F+ +I L +G+ E H
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 141/555 (25%), Positives = 236/555 (42%), Gaps = 84/555 (15%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + L+ M +G+ P+ TY LI + R A+++F M G P+ TY I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DM 119
+G + ALE +M +G+ + V+ C L K G+ E K+ +
Sbjct: 441 DYYGKSGDSVS-ALETFEKMKTKGIAPNIVA-----CNASLYSLAKAGRDREAKQIFYGL 494
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D G++PDSVTY +++ VG + EA L EM+ G PD +L+N
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG-CEPDVIVVNSLINTLYKADR 553
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A+ + M P++VTYN L+ G G++QEA+E+F GM + G
Sbjct: 554 VDEAWKMFMRMKE--------MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P+T+++ + LCK E A ++ +M M + D TY+++I
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMD---------------MGCVPDVFTYNTII 650
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+ G +++A + M Y D VTL LL G+ K A E + ++ + C
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVK-ASLIEDAYKIITNFLYNCA 708
Query: 360 GMPAYIIYDTLI-----ENCSNNEF---KRLVG------------PAITFSVK-VAIKAH 398
PA + ++ LI E +N +RLV P I +S K +
Sbjct: 709 DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGA 768
Query: 399 HTMLHG-----NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
T+ +P YNLLI + + A ++++++ G +P + + L+
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLD 828
Query: 454 ALHYDGR-------YNEMS------------WVIHNTLRSCNLSDSELL--KVLNEIDFS 492
A G+ Y EMS VI +++ N+ D+ L ++++ DFS
Sbjct: 829 AYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 493 KPEMT--ALLDVLSE 505
T L+D LS+
Sbjct: 889 PTACTYGPLIDGLSK 903
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 146/324 (45%), Gaps = 29/324 (8%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IE 73
G+ P TY LI + A VF ++ G P + TYN ++ +A+ +G I+
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL--DAYGKSGKID 837
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD-MDDKGILPDSVTYE 132
E+ +EM A+ +++ VI L+ + A ++ D M D+ P + TY
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLV--KAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
LID L GRL EA LF ML G P+ Y L+N + GE A L MV
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYG-CRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
+G PD L TY+ L+ C +GRV E L F+ + E GL+PD V Y +I+GL
Sbjct: 955 EGVRPD--------LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 253 CKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAY 312
K +A L EM R + D Y TY+SLI + G +E+A
Sbjct: 1007 GKSHRLEEALVLFNEMKTSR---GITPDLY-----------TYNSLILNLGIAGMVEEAG 1052
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNG 336
++ + G + T + L+ G
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 132/314 (42%), Gaps = 41/314 (13%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A++V ++ G P TY L+ ++ + + + ++++EM + T+N VI
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 64 TNAFAGTGIEVALEILRE-MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DM 119
AG ++ AL++ + M +R + A +Y +I L K G+ +E K+ M
Sbjct: 864 GLVKAGN-VDDALDLYYDLMSDRDFSPTACTYGPLIDGL-----SKSGRLYEAKQLFEGM 917
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D G P+ Y +LI+ G A LF+ M+ G PD TY L++C C+ G
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLCMVGR 976
Query: 180 FSKAFHLHHEMVHKGFLPDFVT----------------------------GFSPSLVTYN 211
+ H E+ G PD V G +P L TYN
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
+LI G V+EA +I+ + GL P+ ++ +I G +P AY + M
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM--V 1094
Query: 272 RSCLSLNEDTYETL 285
S N TYE L
Sbjct: 1095 TGGFSPNTGTYEQL 1108
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 5/197 (2%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA+++ E M G P+ Y LI+ F + A A +F+ M+ G P L TY+ ++
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD-D 121
G ++ L +E+ E GL D V Y +I L +L +A + +M
Sbjct: 969 DCLCMVGR-VDEGLHYFKELKESGLNPDVVCYNLIING--LGKSHRLEEALVLFNEMKTS 1025
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+GI PD TY LI NL G + EA ++ E + R G P+ T+ L+ Y L G+
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNE-IQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 182 KAFHLHHEMVHKGFLPD 198
A+ ++ MV GF P+
Sbjct: 1085 HAYAVYQTMVTGGFSPN 1101
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 168/418 (40%), Gaps = 48/418 (11%)
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
A GI+ A+ + G+ D S I G +K D G+ P
Sbjct: 724 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
TY +LI L + A D+F ++ G PD TY L++ Y G+ + F L
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKIDELFEL 842
Query: 187 HHEM-VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRG-MPEMGLSPDTVS 244
+ EM H+ + +T+N +I G G V +AL+++ M + SP +
Sbjct: 843 YKEMSTHE---------CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 245 YRQVISGLCK---IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
Y +I GL K + E + +E L+ + +C Y+ LIN
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA------------------IYNILING 935
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM 361
+ G+ + A L M +G D T SVL++ L + R E Y + G+
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE---LKESGL 992
Query: 362 -PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH 420
P + Y+ +I + RL + F+ +K + PD YN LI +
Sbjct: 993 NPDVVCYNLIINGLGKSH--RLEEALVLFN---EMKTSRGI-----TPDLYTYNSLILNL 1042
Query: 421 SRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
+ V +A +Y E+ G P++F+ ALI+ G+ E ++ ++ T+ + S
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK-PEHAYAVYQTMVTGGFS 1099
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 223/495 (45%), Gaps = 76/495 (15%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA ++++M+ P+ T+ LIH ++AS+AV + M+ RG P L TY
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G I++AL +L++M + + AD V Y +I AL + + A + +M
Sbjct: 226 VV--NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC--NYKNVNDALNLFTEM 281
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D+KGI P+ VTY LI LC GR S+A L +M+ R +P+ T+ L++ + +G+
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGK 340
Query: 180 FSKAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNA 212
+A L+ EM+ + PD T GF P++VTYN
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C RV+E +E+FR M + GL +TV+Y +I GL + +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD--------------- 445
Query: 273 SCLSLNEDTYETLMEQLSDED--TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTL 330
+ + ++ ++ D TYS L++ G LEKA + + D T
Sbjct: 446 --CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 331 SVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFS 390
++++ G+ K A E W L ++ + P IIY T+I F
Sbjct: 504 NIMIEGMCK-AGKVEDGWDLFCSLSLKGVK-PNVIIYTTMISG---------------FC 546
Query: 391 VKVAIKAHHTMLHGNYKPDGTV-----YNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHM 445
K +K L K DGT+ YN LI R + + + EM GFV
Sbjct: 547 RK-GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 446 FSVLALIKALHYDGR 460
++ +I LH DGR
Sbjct: 606 STISMVINMLH-DGR 619
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 145/356 (40%), Gaps = 37/356 (10%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
KL A ++ +M LP V + L+ + + + L E + S D ++Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISL-GERMQNLRISYDLYSY 118
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
L+NC+C + + A + +M+ G+ PD +VT ++L+ GYC R+ EA+
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPD--------IVTLSSLLNGYCHGKRISEAV 170
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ M M P+TV++ +I GL + +A L M R C D +
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM-VARGC---QPDLF----- 221
Query: 288 QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
TY +++N +GD++ A L M +D V + +++ L +A
Sbjct: 222 ------TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA- 274
Query: 348 WYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYK 407
L+T P + Y++LI N + R + S M+
Sbjct: 275 -LNLFTEMDNKGIRPNVVTYNSLIRCLCN--YGRWSDASRLLS---------DMIERKIN 322
Query: 408 PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
P+ ++ LI + ++ +A +Y EM+ P +F+ +LI R +E
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 40/296 (13%)
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ A L EMV LP S+V +N L+ + + + + M + +
Sbjct: 60 KLDDAVDLFGEMVQSRPLP--------SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRI 111
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYS 296
S D SY +I+ C+ RS L L +M+ + D T S
Sbjct: 112 SYDLYSYNILINCFCR-----------------RSQLPLALAVLGKMMKLGYEPDIVTLS 154
Query: 297 SLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFF 356
SL+N Y + +A L M Y + VT + L++GL + +EA + V
Sbjct: 155 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 357 RCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLL 416
C P Y T++ N KR + +A+ M G + D +Y +
Sbjct: 215 GC--QPDLFTYGTVV----NGLCKR-------GDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 417 IFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTL 472
I V+ A N++ EM + G P++ + +LI+ L GR+++ S ++ + +
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 228/486 (46%), Gaps = 55/486 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P T+T LIH ++AS+AV + +M+ RG P L TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G I++AL +L +M + A+ V + +I +L + A ++ +M
Sbjct: 229 VV--NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC--KYRHVEVAVDLFTEM 284
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ KGI P+ VTY LI+ LC GR S+A L ML + +P+ T+ L++ + +G+
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGK 343
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A LH EM+ + PD +TYN LI G+C R+ EA ++F+ M
Sbjct: 344 LVEAEKLHEEMIQRSIDPD--------TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P+ +Y +I+G CK + EL EM ++ + + TY+++I
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQR---------------GLVGNTVTYTTII 440
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+ GD + A + M + +D +T S+LL+GL + A L+ + +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA---LVIFKYLQKS 497
Query: 360 GMPAYI-IYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHG------------- 404
M I IY+T+IE C + + S+K + ++TM+ G
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 405 --NYKPDGTV-----YNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
K DGT+ YN LI + R + + + EM GFV S ++L+ + +
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA-STISLVTNMLH 616
Query: 458 DGRYNE 463
DGR ++
Sbjct: 617 DGRLDK 622
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 19/301 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAE++ EEM + + P TY LI+ FC +R +A ++F+ M+ + P++ TYN
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N F +E +E+ REM +RGL + V+Y +I + A + K M
Sbjct: 404 LI--NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD--CDSAQMVFKQM 459
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ D +TY +L+ LC G+L A +F+ L + + Y ++ C G+
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A+ L + K P +VTYN +I G CS +QEA ++FR M E G
Sbjct: 519 VGEAWDLFCSLSIK-----------PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P++ +Y +I +R+ +A +L + + S + T + L D S +
Sbjct: 568 PNSGTYNTLIRA--NLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFL 625
Query: 300 N 300
N
Sbjct: 626 N 626
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 154/373 (41%), Gaps = 52/373 (13%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
K+ A ++ DM P V + L+ + + + L +M G S D +TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTY 121
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
+NC+C + + S A + +M+ G+ PD +VT ++L+ GYC R+ +A+
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPD--------IVTLSSLLNGYCHSKRISDAV 173
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ M EMG PDT ++ +I GL + +A L +M +R C
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGC------------- 219
Query: 288 QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
D TY +++N +GD++ A L M ++ V + +++ L K R E
Sbjct: 220 -QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY-RHVEVA 277
Query: 348 WYLLWTVFFRCFGMPAYIIYDTLIENC--------------SNNEFKRLVGPAITFSVKV 393
L + + P + Y++LI NC SN K++ +TF+ +
Sbjct: 278 VDLFTEMETKGI-RPNVVTYNSLI-NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 394 -----------AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFV 442
A K H M+ + PD YNLLI + +A M+ MV +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 443 PHMFSVLALIKAL 455
P++ + LI
Sbjct: 396 PNIQTYNTLINGF 408
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 224/488 (45%), Gaps = 56/488 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P T+T LIH ++AS+AV + M+ RG P+L TY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G I++A +L +M + AD V + +I +L + A + K+M
Sbjct: 156 VV--NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC--KYRHVDDALNLFKEM 211
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ KGI P+ VTY LI LC GR S+A L +M+ + +P+ T+ L++ + +G+
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGK 270
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F +A LH +M+ + PD + TYN+LI G+C R+ +A ++F M
Sbjct: 271 FVEAEKLHDDMIKRSIDPD--------IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL---------- 289
PD +Y +I G CK + EL EM + L + TY TL++ L
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 290 ------------SDEDTYSSLINDYLAQGDLEKAYQL-DYVMGHDGYLSDNVTLSVLLNG 336
D TYS L++ G LEKA ++ DY+ + L D + ++ G
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEG 439
Query: 337 LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAI 395
+ K + + W L ++ + P + Y+T+I CS KRL+ A K
Sbjct: 440 MCKAGKVDDG-WDLFCSLSLKGVK-PNVVTYNTMISGLCS----KRLLQEAYALLKK--- 490
Query: 396 KAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
M PD YN LI H R + + + EM FV S + L+ +
Sbjct: 491 -----MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLVANM 544
Query: 456 HYDGRYNE 463
+DGR ++
Sbjct: 545 LHDGRLDK 552
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 146/381 (38%), Gaps = 58/381 (15%)
Query: 107 EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+K + + M GI + TY +LI+ C ++S A L +M+ + G+ P T
Sbjct: 24 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVT 82
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT------------------------- 201
+L+N YC S A L +MV G+ PD +T
Sbjct: 83 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 142
Query: 202 --GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
G P+LVTY ++ G C G + A + M + D V + +I LCK R
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMG 319
A L EM+ K + + TYSSLI+ + G A QL M
Sbjct: 203 DALNLFKEMETK----GIRPNVV-----------TYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 320 HDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNE 378
+ VT + L++ K + EA+ L + P Y++LI C ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEK--LHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
+ A + M+ + PD YN LI +S V ++ EM H
Sbjct: 306 LDK------------AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 439 YGFVPHMFSVLALIKALHYDG 459
G V + LI+ L +DG
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDG 374
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 109/268 (40%), Gaps = 28/268 (10%)
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
PS+ +N L+ + + + + M +G+S + +Y +I+ C+ + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 265 KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
+M K YE + T SSL+N Y + A L M GY
Sbjct: 68 LGKMMKL---------GYEPSIV------TLSSLLNGYCHGKRISDAVALVDQMVEMGYR 112
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVG 384
D +T + L++GL + +EA + V C P + Y ++ N KR
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC--QPNLVTYGVVV----NGLCKR--- 163
Query: 385 PAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
+ +A + M + D ++N +I + V A N++ EM G P+
Sbjct: 164 ----GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 445 MFSVLALIKALHYDGRYNEMSWVIHNTL 472
+ + +LI L GR+++ S ++ + +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMI 247
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 43/461 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A ++LE + G P TY +I +C+ + A+ V M SP + TYN ++
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTIL 211
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
++ +G ++ A+E+L M +R D ++Y +I A + +G A ++ +M D+
Sbjct: 212 RSLCDSGK-LKQAMEVLDRMLQRDCYPDVITYTILIEATC--RDSGVGHAMKLLDEMRDR 268
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD VTY VL++ +C GRL EA +M G P+ T+ ++ C G +
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM-PSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L +M+ KGF SPS+VT+N LI C G + A++I MP+ G P++
Sbjct: 328 AEKLLADMLRKGF--------SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+SY ++ G CK ++ +A E LE R C D TY++++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEY-LERMVSRGC--------------YPDIVTYNTMLTAL 424
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
G +E A ++ + G +T + +++GL K +T +A LL + + P
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA-IKLLDEMRAKDL-KP 482
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
I Y +L+ S V AIK H +P+ +N ++ +
Sbjct: 483 DTITYSSLVGGLSREG-----------KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
S + +A + + M++ G P+ S LI+ L Y+G E
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 178/373 (47%), Gaps = 31/373 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A EVL+ M + P TYT LI + C++S A+K+ EM DRG +P + TYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ N G ++ A++ L +MP G + ++ H I + + A ++ DM
Sbjct: 280 LV--NGICKEGRLDEAIKFLNDMPSSGCQPNVIT--HNIILRSMCSTGRWMDAEKLLADM 335
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
KG P VT+ +LI+ LC G L A D+ +M G P+ +Y L++ +C + +
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH-GCQPNSLSYNPLLHGFCKEKK 394
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A MV +G PD +VTYN ++ C G+V++A+EI + G S
Sbjct: 395 MDRAIEYLERMVSRGCYPD--------IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P ++Y VI GL K + KA +L EM K L DT TYSSL+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK----DLKPDTI-----------TYSSLV 491
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+G +++A + + G + VT + ++ GL K +T A +L++ + C
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC- 550
Query: 360 GMPAYIIYDTLIE 372
P Y LIE
Sbjct: 551 -KPNETSYTILIE 562
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + L +M G P+ T+ ++ S C R A K+ +M+ +GFSPS+ T+N
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMKK 117
+I G + A++IL +MP+ G +++SY H C E+K+ +A E +
Sbjct: 350 LINFLCRKGL-LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK-----EKKMDRAIEYLE 403
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
M +G PD VTY ++ LC G++ +A ++ ++ +G SP TY +++
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKA 462
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTY 210
G+ KA L EM K PD +T G P+ VT+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 211 NALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
N+++ G C + A++ M G P+ SY +I GL
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 186/456 (40%), Gaps = 72/456 (15%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
K KA ++ + ++ G +PD +TY V+I C G ++ A + L R SPD TY
Sbjct: 152 KTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV----LDRMSVSPDVVTY 207
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT-------------------------- 201
++ C G+ +A + M+ + PD +T
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 202 -GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
G +P +VTYN L+ G C GR+ EA++ MP G P+ +++ ++ +C +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 261 AYELKLEMDKK------------------RSCLSLNEDTYETLMEQLSDED--TYSSLIN 300
A +L +M +K + L D E + + + +Y+ L++
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
+ + +++A + M G D VT + +L L K + +A L C
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC-- 445
Query: 361 MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH 420
P I Y+T+I+ G A AIK M + KPD Y+ L+
Sbjct: 446 SPVLITYNTVID-----------GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 421 SRSLEVHKAYNMYMEMVHYGFVPHMFS----VLALIKALHYDGRYNEMSWVIHNTLRSCN 476
SR +V +A + E G P+ + +L L K+ D + + ++I+ R C
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN---RGCK 551
Query: 477 LSDSELLKVLNEIDFSKPEMTALLDVLSEIAMDGLL 512
+++ ++ + + A L++L+E+ GL+
Sbjct: 552 PNETSYTILIEGLAYEGMAKEA-LELLNELCNKGLM 586
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 137/340 (40%), Gaps = 65/340 (19%)
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
GE + F MV+ G +PD ++ LI G+C LG+ ++A +I + G
Sbjct: 116 GELEEGFKFLENMVYHGNVPD--------IIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED--TYETLMEQLSDED-- 293
PD ++Y +ISG CK E A + +D+ +S++ D TY T++ L D
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSV---LDR----MSVSPDVVTYNTILRSLCDSGKL 220
Query: 294 --------------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
TY+ LI + A +L M G D VT +VL
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEF-----------KR 381
+NG+ K R EA +L C P I ++ ++ + CS + ++
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGC--QPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 382 LVGPA-ITFSVKV-----------AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKA 429
P+ +TF++ + AI M +P+ YN L+ + ++ +A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 430 YNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIH 469
MV G P + + ++ AL DG+ + +++
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 211/482 (43%), Gaps = 59/482 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA E+++ M G P T L++ C + S AV + M++ GF P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V+ +G +A+E+LR+M ER + DAV Y +I L + L AF + +M+
Sbjct: 234 VLNVMCKSGQ-TALAMELLRKMEERNIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEME 290
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG D +TY LI C GR + L R+M+ R SP+ T+ L++ + +G+
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSFVKEGKL 349
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
+A L EM+ +G P+ +T G P ++T+N L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I GYC R+ + LE+FR M G+ +TV+Y ++ G C+ + A +L EM +R
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR- 468
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+ + +Y+ L++ L D G+LEKA ++ + D ++
Sbjct: 469 -VRPDIVSYKILLDGLCD-------------NGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKV 393
++G+ ++ +A W L ++ + + A + E C + + I F
Sbjct: 515 IHGMCNASKVDDA-WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK---ADILF---- 566
Query: 394 AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
M + PD YN+LI H + A + EM GF + +V +I
Sbjct: 567 -----RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 454 AL 455
L
Sbjct: 622 ML 623
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 208/466 (44%), Gaps = 57/466 (12%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
G P + L++ C E R S+A+++ M++ G P+L T N ++ G +
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK-VSD 211
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
A+ ++ M E G + V+Y V+ + + L A E+ + M+++ I D+V Y ++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL--AMELLRKMEERNIKLDAVKYSII 269
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
ID LC G L AF+LF EM + GF D TY L+ +C G + L +M+ +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR- 327
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
SP++VT++ LI + G+++EA ++ + M + G++P+T++Y +I G CK
Sbjct: 328 -------KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLINDYLAQGDLEKAY 312
+A ++ + ++ + D D T++ LIN Y ++
Sbjct: 381 ENRLEEAIQM-----------------VDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIE 372
+L M G +++ VT + L+ G + + AK V R P + Y L++
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV--RPDIVSYKILLD 481
Query: 373 N-CSNNEFKR---LVGPAITFSVKVAIKAHHTMLHG--------------------NYKP 408
C N E ++ + G +++ I + ++HG K
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 409 DGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
D YN++I + R + KA ++ +M G P + LI+A
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 183/436 (41%), Gaps = 60/436 (13%)
Query: 35 RASKAVKVFREMIDRGFSPSLDTYN----AVIQTNAFAGTGIEVALEILREMPERGL--- 87
+A AV +FR+MI P++ +N A+ +T + E+ L + ++M +G+
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY-----ELVLALCKQMESKGIAHS 122
Query: 88 --TADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
T + C C KL AF + G PD+V + L++ LC R+S
Sbjct: 123 IYTLSIMINCFCRC-------RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS 175
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
EA +L M+ G P T L+N CL G+ S A L MV TGF P
Sbjct: 176 EALELVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE--------TGFQP 226
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+ VTY ++ C G+ A+E+ R M E + D V Y +I GLCK A+ L
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLS 325
EM+ K ++ +D TY++LI + G + +L M
Sbjct: 287 NEMEIK---------GFK------ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 326 DNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVG 384
+ VT SVL++ K + EA LL + R P I Y++LI+ C N +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQ-LLKEMMQRGIA-PNTITYNSLIDGFCKENRLEE--- 386
Query: 385 PAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
AI+ M+ PD +N+LI + ++ + ++ EM G + +
Sbjct: 387 ---------AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 445 MFSVLALIKALHYDGR 460
+ L++ G+
Sbjct: 438 TVTYNTLVQGFCQSGK 453
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 226/493 (45%), Gaps = 66/493 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P T+T LIH ++AS+AV + M+ RG P+L TY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G ++AL +L +M + AD V + +I +L + A + K+M
Sbjct: 231 VV--NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC--KYRHVDDALNLFKEM 286
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ KGI P+ VTY LI LC GR S+A L +M+ + +P+ T+ L++ + +G+
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGK 345
Query: 180 FSKAFHLHHEMVHKGFLPD------FVTGFS---------------------PSLVTYNA 212
F +A L+ +M+ + PD V GF P +VTYN
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C RV++ E+FR M GL DTV+Y +I GL + A ++ +M
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM---- 461
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL-DYVMGHDGYLSDNVTLS 331
+++ +M TYS L++ G LEKA ++ DY+ + L D +
Sbjct: 462 ----VSDGVPPDIM-------TYSILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYT 509
Query: 332 VLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFS 390
++ G+ K + + W L ++ + P + Y+T+I CS KRL+ A
Sbjct: 510 TMIEGMCKAGKVDDG-WDLFCSLSLKGV-KPNVVTYNTMISGLCS----KRLLQEAYALL 563
Query: 391 VKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
K M P+ YN LI H R + + + EM FV S +
Sbjct: 564 KK--------MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIG 614
Query: 451 LIKALHYDGRYNE 463
L+ + +DGR ++
Sbjct: 615 LVANMLHDGRLDK 627
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 215/521 (41%), Gaps = 105/521 (20%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA-GTGIEVALEILR 80
TY LI+ FC+ S+ S A+ + +M+ G+ PS+ T ++++ N + G I A+ ++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL--NGYCHGKRISDAVALVD 179
Query: 81 EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
+M E G D +++ +I L L K +A + M +G P+ VTY V+++ LC
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFL--HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 141 VG-----------------------------------RLSEAFDLFREMLHRGGFSPDEH 165
G + +A +LF+EM + G P+
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVV 296
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT------------------------ 201
TY +L++C C G +S A L +M+ K P+ VT
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 202 ---GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
P + TYN+L+ G+C R+ +A ++F M PD V+Y +I G CK +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
EL EM + + D TY++LI GD + A ++ M
Sbjct: 417 EDGTELFREMSHR---------------GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 319 GHDGYLSDNVTLSVLLNGL---NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-C 374
DG D +T S+LL+GL K+ + E Y+ + + Y IY T+IE C
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE----IKLDIY-IYTTMIEGMC 516
Query: 375 SNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYM 434
+ + S+K KP+ YN +I + +AY +
Sbjct: 517 KAGKVDDGWDLFCSLSLK------------GVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 435 EMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSC 475
+M G +P+ + LI+A DG + +I +RSC
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE-MRSC 604
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 220/491 (44%), Gaps = 62/491 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P T+T LIH ++AS+AV + +M+ RG P L TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G I++AL +L++M + + AD V Y +I L + + A + +M
Sbjct: 229 VV--NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC--KYKHMDDALNLFTEM 284
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D+KGI PD TY LI LC GR S+A L +M+ R +P+ T+ L++ + +G+
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGK 343
Query: 180 FSKAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNA 212
+A L+ EM+ + PD T GF P++VTY+
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C RV+E +E+FR M + GL +TV+Y +I G + R+ A + +M
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM---- 459
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
++ + ++ TY+ L++ G L KA + + D T ++
Sbjct: 460 ----VSVGVHPNIL-------TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
++ G+ K + E W L + + P I Y+T+I G S +
Sbjct: 509 MIEGMCKAGK-VEDGWELFCNLSLKGVS-PNVIAYNTMIS-----------GFCRKGSKE 555
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
A M P+ YN LI R + + + EM GF S + L+
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-STIGLV 614
Query: 453 KALHYDGRYNE 463
+ +DGR ++
Sbjct: 615 TNMLHDGRLDK 625
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 208/467 (44%), Gaps = 48/467 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A VL +M G P T + L++ +C R S AV + +M++ G+ P T+
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I F A+ ++ +M +RG D V+Y V+ L + L A + K M+
Sbjct: 194 LIH-GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL--ALSLLKKME 250
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
I D V Y +ID LC + +A +LF EM ++G PD TY +L++C C G +
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRW 309
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
S A L +M+ + +P++VT++ALI + G++ EA +++ M + + P
Sbjct: 310 SDASRLLSDMIERKI--------NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 241 DTVSYRQVISGLC---KIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSS 297
D +Y +I+G C ++ E +EL + ++D + ++ TYS+
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMI-----------SKDCFPNVV-------TYST 403
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFR 357
LI + +E+ +L M G + + VT + L++G + A+ +++
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ--MVFKQMVS 461
Query: 358 CFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLL 416
P + Y+ L++ C N + + A+ + +PD YN++
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAK------------AMVVFEYLQRSTMEPDIYTYNIM 509
Query: 417 IFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
I ++ +V + ++ + G P++ + +I G E
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 189/465 (40%), Gaps = 55/465 (11%)
Query: 35 RASKAVKVFREMIDRGFSPSLDTYN----AVIQTNAFAGTGIEVALEILREMPERGLTAD 90
+ AV +F +M+ PS+ +N AV + N F E+ + + +M G++ D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-----ELVISLGEQMQTLGISHD 117
Query: 91 AVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDL 150
+Y I +L A + M G PD VT L++ C R+S+A L
Sbjct: 118 LYTYSIFINCFC--RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 151 FREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTY 210
+M+ G + PD T+ L++ L + S+A L +MV +G PD LVTY
Sbjct: 176 VDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTY 226
Query: 211 NALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK 270
++ G C G + AL + + M + + D V Y +I GLCK + A L EMD
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 271 KR------------SCLSLNEDTYETLMEQLSDED---------TYSSLINDYLAQGDLE 309
K SCL N + LSD T+S+LI+ ++ +G L
Sbjct: 287 KGIRPDVFTYSSLISCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDT 369
+A +L M D T S L+NG R EAK + CF P + Y T
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYST 403
Query: 370 LIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKA 429
LI+ G V+ ++ M + Y LI ++ + A
Sbjct: 404 LIK-----------GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 430 YNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRS 474
++ +MV G P++ + L+ L +G+ + V RS
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 180/381 (47%), Gaps = 51/381 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA +++ M G P E TY +++ C+ ++ A+ +FR+M +R S+ Y+
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
VI + G+ + AL + EM +G+ AD V+Y +I L + K +M ++M
Sbjct: 251 VIDSLCKDGS-FDDALSLFNEMEMKGIKADVVTYSSLIGGLC--NDGKWDDGAKMLREMI 307
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I+PD VT+ LID G+L EA +L+ EM+ RG +PD TY +L++ +C +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG-IAPDTITYNSLIDGFCKENCL 366
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
+A + MV KG PD VT G P+ +TYN L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
+ G+C G++ A E+F+ M G+ P V+Y ++ GLC E KA E+ +M K R
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 274 CLSL--------------NEDTYETLMEQLSDED------TYSSLINDYLAQGDLEKAYQ 313
L + D +L LSD+ TY+ +I +G L +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 314 LDYVMGHDGYLSDNVTLSVLL 334
L M DG D+ T ++L+
Sbjct: 547 LFRKMKEDGCTPDDFTYNILI 567
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/533 (24%), Positives = 235/533 (44%), Gaps = 69/533 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A VL + G P T++ L++ FC E R S+AV + M++ P L T + +I
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G + AL ++ M E G D V+Y V+ L L A ++ + M+++
Sbjct: 184 GLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL--ALDLFRKMEERN 240
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I V Y ++ID+LC G +A LF EM + G D TY +L+ C G++
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ EM+ + +PD +VT++ALI + G++ EA E++ M G++PDT+
Sbjct: 300 AKMLREMIGRNIIPD--------VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLIND 301
+Y +I G C K +CL ++ ++ + + D TYS LIN
Sbjct: 352 TYNSLIDGFC-----------------KENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM 361
Y ++ +L + G + + +T + L+ G + + AK L + R G+
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK-ELFQEMVSR--GV 451
Query: 362 PAYII-YDTLIEN-CSNNE-------FKRLVGPAITFSVKVAIKAHHTMLHG-------- 404
P ++ Y L++ C N E F+++ +T + + ++ ++HG
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI----YNIIIHGMCNASKVD 507
Query: 405 ------------NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
KPD YN++I + + +A ++ +M G P F+ LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 453 KALHYDGRYNEMSWVIHNTLRSCNLS-DSELLKVLNEIDFSKPEMTALLDVLS 504
+A H G S + ++ C S DS +K++ ++ + + LD+LS
Sbjct: 568 RA-HLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 197/486 (40%), Gaps = 71/486 (14%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN----AVIQTNA 66
+++ +T + +Y + + + + + A+ +F MI P+ +N AV +T
Sbjct: 26 LHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQ 85
Query: 67 FAGTGIEVALEILREMPERGLTADAVSY-----CHVICALLLPPEEKLGKAFEMKKDMDD 121
+ ++ L + M G+ D + C+ LL LG+A+++
Sbjct: 86 Y-----DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL------ 134
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G PD++T+ L++ C GR+SEA L M+ PD T L+N CL+G S
Sbjct: 135 -GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVS 192
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A L MV GF PD VTY ++ C G AL++FR M E +
Sbjct: 193 EALVLIDRMVEYGFQPDE--------VTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
V Y VI LCK A L EM+ K + D TYSSLI
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMK----GIKADVV-----------TYSSLIGG 289
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM 361
G + ++ M + D VT S L++ K + EAK L+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE--LYNEMITRGIA 347
Query: 362 PAYIIYDTLI-----ENC---SNNEFKRLVGPA-----ITFSVKV-----------AIKA 397
P I Y++LI ENC +N F +V +T+S+ + ++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 398 HHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
+ P+ YN L+ +S +++ A ++ EMV G P + + L+ L
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 458 DGRYNE 463
+G N+
Sbjct: 468 NGELNK 473
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 141/254 (55%), Gaps = 12/254 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA VL EM GL P+ + CLI +FC+E R +AV++FREM +G P + T+N+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + I+ AL +LR+M G+ A+ V+Y +I A L E K +A ++ +M
Sbjct: 500 LI-SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK--EARKLVNEMV 556
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+G D +TY LI LC G + +A LF +ML R G +P + L+N C G
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML-RDGHAPSNISCNILINGLCRSGMV 615
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A EMV +G PD +VT+N+LI G C GR+++ L +FR + G+ P
Sbjct: 616 EEAVEFQKEMVLRGSTPD--------IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 241 DTVSYRQVISGLCK 254
DTV++ ++S LCK
Sbjct: 668 DTVTFNTLMSWLCK 681
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 209/483 (43%), Gaps = 62/483 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +L +M G P+ Y LIHS + +R ++A+++ EM G P +T+N VI
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI- 294
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
I A +++ M RG D ++Y +++ L K+G+ + KD+ +
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC-----KIGRV-DAAKDLFYRI 348
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
P+ V + LI GRL +A + +M+ G PD TY +L+ Y +G A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 184 FHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYG 216
+ H+M +KG P+ + G P+ V +N LI
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLS 276
+C R+ EA+EIFR MP G PD ++ +ISGLC++ E A L +M
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM-------- 520
Query: 277 LNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
++E +++ TY++LIN +L +G++++A +L M G D +T + L+ G
Sbjct: 521 ISEGV-------VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 337 LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIK 396
L + +A+ L+ R P+ I + LI G + V+ A++
Sbjct: 574 LCRAGEVDKARS--LFEKMLRDGHAPSNISCNILIN-----------GLCRSGMVEEAVE 620
Query: 397 AHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALH 456
M+ PD +N LI R+ + M+ ++ G P + L+ L
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 457 YDG 459
G
Sbjct: 681 KGG 683
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 162/342 (47%), Gaps = 32/342 (9%)
Query: 1 MTEAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
+ +A+ VL +M G+ P TY LI+ + +E A++V +M ++G P++ Y+
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV--YS 426
Query: 60 AVIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
I + F G I+ A +L EM GL + V + +I A E ++ +A E+ ++
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC--KEHRIPEAVEIFRE 484
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M KG PD T+ LI LC V + A L R+M+ G + + TY L+N + +G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA-NTVTYNTLINAFLRRG 543
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSP-SLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
E +A L +EMV +G SP +TYN+LI G C G V +A +F M G
Sbjct: 544 EIKEARKLVNEMVFQG---------SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSS 297
+P +S +I+GLC+ +A E + EM L D T++S
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEM---------------VLRGSTPDIVTFNS 639
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
LIN G +E + + +G D VT + L++ L K
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 222/521 (42%), Gaps = 70/521 (13%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVAL 76
P ++Y ++ + A VF +M+ R P+L T+ V++ AF I+ AL
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK--AFCAVNEIDSAL 237
Query: 77 EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
+LR+M + G ++V Y +I +L ++ +A ++ ++M G +PD+ T+ +I
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSL--SKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
LC R++EA + ML RG F+PD+ TY LMN C G A L + +
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRG-FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---- 350
Query: 197 PDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMGLSPDTVSYRQVISGLCKI 255
P +V +N LI+G+ + GR+ +A + M G+ PD +Y +I G K
Sbjct: 351 --------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK- 401
Query: 256 REPVKAYELKLEMD-KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
E + L++ D + + C + Y +Y+ L++ + G +++AY +
Sbjct: 402 -EGLVGLALEVLHDMRNKGC---KPNVY-----------SYTILVDGFCKLGKIDEAYNV 446
Query: 315 DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN- 373
M DG + V + L++ K R EA ++ R P +++LI
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEA--VEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 374 CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMY 433
C +E K A+ M+ + YN LI R E+ +A +
Sbjct: 505 CEVDEIKH------------ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 434 MEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLR--------SCNLSDSELLK- 484
EMV G + +LIK L G ++ + LR SCN+ + L +
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 485 --VLNEIDFSK--------PEMTALLDVLSEIAMDGLLLDG 515
V ++F K P++ +++ + G + DG
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +++ EM +G E TY LI C+ KA +F +M+ G +PS + N
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N +G +E A+E +EM RG T D V++ +I L ++ M + +
Sbjct: 605 LI--NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC--RAGRIEDGLTMFRKL 660
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
+GI PD+VT+ L+ LC G + +A L E + GF P+ T+
Sbjct: 661 QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE-DGFVPNHRTW 707
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 214/471 (45%), Gaps = 57/471 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +++EM G P+ YT LI +F Q SR A++V +EM ++G +P + YN++I
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ A ++ A L EM E GL +A +Y I + E A + K+M + G
Sbjct: 496 GLSKAKR-MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE--FASADKYVKEMRECG 552
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+LP+ V LI+ C G++ EA +R M+ +G D TY LMN + A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDA 611
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ EM KG PD + +Y LI G+ LG +Q+A IF M E GL+P+ +
Sbjct: 612 EEIFREMRGKGIAPD--------VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
Y ++ G C+ E KA EL EM K L+ + TY ++I+ Y
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVK----GLHPNAV-----------TYCTIIDGYC 708
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG---LNKIARTTEAKWYLLWTVFFRCFG 360
GDL +A++L M G + D+ + L++G LN + R
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER------------------ 750
Query: 361 MPAYIIYDTLIENCSNNE--FKRLVGPAITFS-VKVAIKAHHTMLHGNY----KPDGTVY 413
A I+ T + C+++ F L+ F ++ + + ++ G++ KP+ Y
Sbjct: 751 --AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 414 NLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
N++I + + A ++ +M + +P + + +L+ GR EM
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 207/456 (45%), Gaps = 53/456 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A VL+EM +G+ P Y LI + R +A EM++ G P+ TY A I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE---MKKDM 119
+ + A + ++EM E G+ + V+C L+ K GK E + M
Sbjct: 530 -SGYIEASEFASADKYVKEMRECGVLPN-----KVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D+GIL D+ TY VL++ L ++ +A ++FREM + G +PD +Y L+N + G
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLINGFSKLGN 642
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
KA + EMV + G +P+++ YN L+ G+C G +++A E+ M GL
Sbjct: 643 MQKASSIFDEMVEE--------GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P+ V+Y +I G CK + +A+ L EM K L D++ Y++L+
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK----GLVPDSF-----------VYTTLV 739
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIART---TEAKWYLLWTVFF 356
+ D+E+A + + G S + L+N + K +T TE L+ F
Sbjct: 740 DGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 357 RCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNL 415
R FG P + Y+ +I+ C +++ A + H M + N P Y
Sbjct: 799 R-FGKPNDVTYNIMIDYLCKEG------------NLEAAKELFHQMQNANLMPTVITYTS 845
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPH--MFSVL 449
L+ + + + + ++ E + G P M+SV+
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 168/371 (45%), Gaps = 60/371 (16%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+AEE+ EM KG+ P +Y LI+ F + KA +F EM++ G +P++ YN ++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
F +G IE A E+L EM +GL +AV+YC +I + L +AF + +M
Sbjct: 670 --GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD--LAEAFRLFDEMKL 725
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLF------------------------------ 151
KG++PDS Y L+D C + + A +F
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 152 REMLHR---GGF----SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS 204
E+L+R G F P++ TY +++ C +G A L H+M + +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM-------- 837
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
P+++TY +L+ GY +GR E +F G+ PD + Y +I+ K KA L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 265 KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
+M K + +D + + T +L++ + G++E A ++ M Y+
Sbjct: 898 VDQMFAKNAV----DDGCKLSIS------TCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 325 SDNVTLSVLLN 335
D+ T+ L+N
Sbjct: 948 PDSATVIELIN 958
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 195/481 (40%), Gaps = 57/481 (11%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
E M KGL P + TY LI C+ R A + EM G S TY+ +I
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID-GLLK 324
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G + A ++ EM G+ Y IC ++ E + KA + M G++P +
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCIC--VMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRG-GFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
Y LI+ C + + ++L EM R SP +TY ++ C G+ A+++
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIV 440
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
EM+ +G P++V Y LI + R +A+ + + M E G++PD Y
Sbjct: 441 KEMI--------ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 248 VISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM------EQLSDEDTY------ 295
+I GL K + +A +EM + L N TY + + + D Y
Sbjct: 493 LIIGLSKAKRMDEARSFLVEM--VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 296 ----------SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
+ LIN+Y +G + +A M G L D T +VL+NGL K + +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 346 AKWYLLWTVFFRCFG---MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTML 402
A+ +F G P Y LI N F +L +++ A M+
Sbjct: 611 AE-----EIFREMRGKGIAPDVFSYGVLI-----NGFSKL------GNMQKASSIFDEMV 654
Query: 403 HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYN 462
P+ +YN+L+ RS E+ KA + EM G P+ + +I G
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 463 E 463
E
Sbjct: 715 E 715
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 227/540 (42%), Gaps = 67/540 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A+ +L EM G++ TY+ LI + A A + EM+ G + Y+
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I + G +E A + M GL A +Y +I E+ + + +E+ +M
Sbjct: 353 CICVMSKEGV-MEKAKALFDGMIASGLIPQAQAYASLIEGYC--REKNVRQGYELLVEMK 409
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I+ TY ++ +C G L A+++ +EM+ G P+ Y L+ + F
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRF 468
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A + EM +G PD + YN+LI G R+ EA M E GL P
Sbjct: 469 GDAMRVLKEMKEQGIAPD--------IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDK------KRSCLSL-NE-----------DTY 282
+ +Y ISG + E A + EM + K C L NE Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 283 ETLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
++++Q L D TY+ L+N ++ A ++ M G D + VL+NG +K+
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 341 ARTTEAKWYLLWTVFFRCF--GM-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIK 396
+A ++F G+ P IIY+ L+ C + E ++ A ++++K
Sbjct: 641 GNMQKAS-----SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK----AKELLDEMSVK 691
Query: 397 AHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALH 456
H P+ Y +I + +S ++ +A+ ++ EM G VP F L+
Sbjct: 692 GLH--------PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV---- 739
Query: 457 YDG--RYNEMSWVI---HNTLRSCNLSDSELLKVLNEI-DFSKPEMTALLDVLSEIAMDG 510
DG R N++ I + C S + ++N + F K E+ +VL+ + MDG
Sbjct: 740 -DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT--EVLNRL-MDG 795
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 169/443 (38%), Gaps = 97/443 (21%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT---GI 72
L P L+ + + +R V++ M++R + TY+ +I + AG G
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 73 EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYE 132
+V + +E L D A ++K+ M KG++P TY+
Sbjct: 242 DVLFKTEKEFRTATLNVDG--------------------ALKLKESMICKGLVPLKYTYD 281
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
VLID LC + RL +A L EM G S D HTY L++ A L HEMV
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
G P + Y+ I G +++A +F GM GL P +Y +I G
Sbjct: 341 HGI------NIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 253 CKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAY 312
C+ + + YEL +EM K+ +S TY +++ + GDL+ AY
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVIS---------------PYTYGTVVKGMCSSGDLDGAY 437
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIE 372
N+ ++ +G P +IY TLI+
Sbjct: 438 --------------NIVKEMIASGCR-----------------------PNVVIYTTLIK 460
Query: 373 N-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYN 431
N+ F A++ M PD YN LI S++ + +A +
Sbjct: 461 TFLQNSRFGD------------AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 432 MYMEMVHYGFVPHMFSVLALIKA 454
+EMV G P+ F+ A I
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISG 531
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 29/351 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A V+ +M G P T + LI+ FCQ +R A+ + +M + GF P + YN +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ G + A+E+ M G+ ADAV+Y ++ L + A + +DM +
Sbjct: 183 GSCKIGL-VNDAVELFDRMERDGVRADAVTYNSLVAGLCC--SGRWSDAARLMRDMVMRD 239
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I+P+ +T+ +ID G+ SEA L+ EM R PD TY +L+N C+ G +A
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEA 298
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ MV KG LPD +VTYN LI G+C RV E ++FR M + GL DT+
Sbjct: 299 KQMLDLMVTKGCLPD--------VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRS-----------CLSLNEDTYETLMEQLS-- 290
+Y +I G + P A E+ MD + + C++ + L E +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 291 ----DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
D TY+ +I+ G++E A+ L + G D V+ + +++G
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 147/324 (45%), Gaps = 30/324 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A E+ + M G+ TY L+ C R S A ++ R+M+ R P++ T+ A
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
VI G E A+++ EM R + D +Y +I L + ++ +A +M M
Sbjct: 250 VIDVFVKEGKFSE-AMKLYEEMTRRCVDPDVFTYNSLINGLCM--HGRVDEAKQMLDLMV 306
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG LPD VTY LI+ C R+ E LFREM R G D TY ++ Y G
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYFQAGRP 365
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A + M + P++ TY+ L+YG C RV++AL +F M + +
Sbjct: 366 DAAQEIFSRMDSR-----------PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D +Y VI G+CKI A++L + SC L D +Y+++I+
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSL----SCKGLKPDVV-----------SYTTMIS 459
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYL 324
+ + +K+ L M DG L
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 17/240 (7%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+EA ++ EEM + + P TY LI+ C R +A ++ M+ +G P + TYN +
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I N F + ++ ++ REM +RGL D ++Y +I + A E+ MD
Sbjct: 321 I--NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF--QAGRPDAAQEIFSRMD 376
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ P+ TY +L+ LC R+ +A LF M + D TY +++ C G
Sbjct: 377 SR---PNIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELDITTYNIVIHGMCKIGNV 432
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A+ L + KG PD +V+Y +I G+C + ++ ++R M E GL P
Sbjct: 433 EDAWDLFRSLSCKGLKPD--------VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 132/322 (40%), Gaps = 45/322 (13%)
Query: 145 SEAFDLFREMLHR---GGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
S+ +DL + H G D ++Y ++NC C F A + +M+ G+ PD
Sbjct: 82 SKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD--- 138
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
+VT ++LI G+C RV +A+++ M EMG PD V Y +I G CKI A
Sbjct: 139 -----VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 262 YEL--KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMG 319
EL ++E D R+ D TY+SL+ G A +L M
Sbjct: 194 VELFDRMERDGVRA-----------------DAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 320 HDGYLSDNVTLSVLLNGLNKIARTTEA-KWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE 378
+ + +T + +++ K + +EA K Y T RC P Y++LI
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR--RCVD-PDVFTYNSLIN------ 287
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
G + V A + M+ PD YN LI +S V + ++ EM
Sbjct: 288 -----GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 439 YGFVPHMFSVLALIKALHYDGR 460
G V + +I+ GR
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGR 364
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 217/491 (44%), Gaps = 62/491 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++ +M G P T+ LIH + +RAS+AV + M+ +G P L TY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G I++AL +L++M + + V Y +I AL + + A + +M
Sbjct: 227 VV--NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC--NYKNVNDALNLFTEM 282
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D+KGI P+ VTY LI LC GR S+A L +M+ R +P+ T+ L++ + +G+
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGK 341
Query: 180 FSKAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNA 212
+A L+ EM+ + PD T GF P++VTYN
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C RV E +E+FR M + GL +TV+Y +I G + RE A + +M
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM---- 457
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
+++ +M TYS L++ G +E A + + D T ++
Sbjct: 458 ----VSDGVLPDIM-------TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
++ G+ K A E W L ++ + P + Y T++ K +
Sbjct: 507 MIEGMCK-AGKVEDGWDLFCSLSLKGVK-PNVVTYTTMMSGFCRKGLK-----------E 553
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
A M PD YN LI H R + + + EM FV S + L+
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLV 612
Query: 453 KALHYDGRYNE 463
+ +DGR ++
Sbjct: 613 TNMLHDGRLDK 623
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 221/497 (44%), Gaps = 55/497 (11%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
E+M + G++ + TY+ LI+ FC+ S+ S A+ V +M+ G+ P + T N+++ N F
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL--NGFC 162
Query: 69 -GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
G I A+ ++ +M E G D+ ++ +I L + +A + M KG PD
Sbjct: 163 HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF--RHNRASEAVALVDRMVVKGCQPD 220
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
VTY ++++ LC G + A L ++M +G P Y +++ C + A +L
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
EM +K G P++VTYN+LI C+ GR +A + M E ++P+ V++
Sbjct: 280 TEMDNK--------GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 248 VISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGD 307
+I K + V+A +L EM K+ S++ D + TYSSLIN +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKR----SIDPDIF-----------TYSSLINGFCMHDR 376
Query: 308 LEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIY 367
L++A + +M + VT + L+ G K R E L + R + + Y
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG-MELFREMSQRGL-VGNTVTY 434
Query: 368 DTLI------ENCSNNE--FKRLVGPAI-----TFS-----------VKVAIKAHHTMLH 403
TLI C N + FK++V + T+S V+ A+ +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 404 GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
+PD YN++I ++ +V ++++ + G P++ + ++ G E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 464 MSWVIHNTLRSCNLSDS 480
+ L DS
Sbjct: 555 ADALFREMKEEGPLPDS 571
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 37/356 (10%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
KL A + DM P V + L+ + + + L +M G S + +TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTY 119
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
L+NC+C + + S A + +M+ G+ PD +VT N+L+ G+C R+ +A+
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPD--------IVTLNSLLNGFCHGNRISDAV 171
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ M EMG PD+ ++ +I GL + +A L M K C
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GC------------- 217
Query: 288 QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
D TY ++N +GD++ A L M V + +++ L +A
Sbjct: 218 -QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA- 275
Query: 348 WYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYK 407
L+T P + Y++LI N + R + S M+
Sbjct: 276 -LNLFTEMDNKGIRPNVVTYNSLIRCLCN--YGRWSDASRLLS---------DMIERKIN 323
Query: 408 PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
P+ ++ LI + ++ +A +Y EM+ P +F+ +LI R +E
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 216/499 (43%), Gaps = 84/499 (16%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
Y LI + +E ++++FR M GF+PS+ T NA++ + +G + V L+E
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV-WSFLKE 223
Query: 82 MPERGLTADAVSY---CHVICA--------LLLPPEEKLG-------------------- 110
M +R + D ++ +V+CA L+ EK G
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 111 --KAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYF 168
A E+ M KG+ D TY +LI +LC R+++ + L R+M R P+E TY
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR-MIHPNEVTYN 342
Query: 169 NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALE 228
L+N + +G+ A L +EM+ G SP+ VT+NALI G+ S G +EAL+
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLS--------FGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ 288
+F M GL+P VSY ++ GLCK E A + M + C+
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG------------ 442
Query: 289 LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKW 348
TY+ +I+ G L++A L M DG D VT S L+NG K+ R AK
Sbjct: 443 ---RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499
Query: 349 YLLWTVFFRCFGMPAYIIYDTLIENCSN----NEFKRLVGPAI---------TFSVKV-- 393
+ +R P IIY TLI NC E R+ I TF+V V
Sbjct: 500 IVCR--IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 394 ---------AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
A + M P+ ++ LI + S E KA++++ EM G P
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT 617
Query: 445 MFSVLALIKALHYDGRYNE 463
F+ +L+K L G E
Sbjct: 618 FFTYGSLLKGLCKGGHLRE 636
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 208/465 (44%), Gaps = 56/465 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+L+ M KG+ TY LIH C+ +R +K + R+M R P+ TYN +I
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI- 345
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
N F+ G + +A ++L EM GL+ + V++ +I + E +A +M M+ K
Sbjct: 346 -NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI--SEGNFKEALKMFYMMEAK 402
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREM---LHRGGFSPDEHTYFNLMNCYCLQGE 179
G+ P V+Y VL+D LC + FDL R + R G TY +++ C G
Sbjct: 403 GLTPSEVSYGVLLDGLCK----NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A L +EM G PD +VTY+ALI G+C +GR + A EI + +GLS
Sbjct: 459 LDEAVVLLNEMSKDGIDPD--------IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 240 PDTVSYRQVISGLCK---IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
P+ + Y +I C+ ++E ++ YE + L D T++
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMI------------------LEGHTRDHFTFN 552
Query: 297 SLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFF 356
L+ G + +A + M DG L + V+ L+NG +A + ++
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA--FSVFDEMT 610
Query: 357 RCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNL 415
+ P + Y +L++ C + + +K+ H + D +YN
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLRE---------AEKFLKSLHAVPAA---VDTVMYNT 658
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
L+ +S + KA +++ EMV +P ++ +LI L G+
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 219/516 (42%), Gaps = 74/516 (14%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+L +M + + P+E TY LI+ F E + A ++ EM+ G SP+ T+NA+I +
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
G E AL++ M +GLT VSY ++ L E L + F M+ M G+
Sbjct: 385 SEGNFKE-ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCV 441
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+TY +ID LC G L EA L EM + G PD TY L+N +C G F A +
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Query: 187 HHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYGYCS 219
+ G P+ + G + T+N L+ C
Sbjct: 501 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 560
Query: 220 LGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK--------- 270
G+V EA E R M G+ P+TVS+ +I+G E +KA+ + EM K
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620
Query: 271 -----KRSCLSLNEDTYETLMEQL------SDEDTYSSLINDYLAQGDLEKAYQLDYVMG 319
K C + E ++ L D Y++L+ G+L KA L M
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Query: 320 HDGYLSDNVTLSVLLNGLNKIART---------TEAKWYLLWT-VFFRCF--GM------ 361
L D+ T + L++GL + +T EA+ +L V + CF GM
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740
Query: 362 PAYIIYDTLIENCSNNEFKRLVGPAI-TFSVKVAIKAHHTML----HGNYKPDGTVYNLL 416
A I + ++N + I +S I+ + +L + N P+ T YN+L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 417 IFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
+ +S+ +V ++ +Y ++ G +P + +L+
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/537 (22%), Positives = 214/537 (39%), Gaps = 98/537 (18%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAEE + M G+ P+ ++ CLI+ + KA VF EM G P+ TY +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+++ G + A + L+ + D V Y ++ A+ L KA + +M
Sbjct: 624 LLK-GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC--KSGNLAKAVSLFGEMV 680
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ ILPDS TY LI LC G+ A +E RG P++ Y ++ G++
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740
Query: 181 SKAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNAL 213
+ +M + G PD VT G+S P+L TYN L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIR------EPVKAYELK-L 266
++GY V + ++R + G+ PD ++ ++ G+C+ + +KA+ + +
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 267 EMDK-------KRSC-------------------LSLNEDTYETLMEQLS---------- 290
E+D+ + C +SL++DT + ++ L+
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 291 ------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
+ Y LIN GD++ A+ + M NV S ++ L
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 339 KIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAH 398
K + EA L + + + +P + TL+ C N +V A++
Sbjct: 981 KCGKADEATLLLRFMLKMKL--VPTIASFTTLMHLCCKNG-----------NVIEALELR 1027
Query: 399 HTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
M + K D YN+LI ++ A+ +Y EM GF+ + + ALI+ L
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 212/492 (43%), Gaps = 50/492 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +L EM G+ P TY+ LI+ FC+ R A ++ + G SP+ Y+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I G ++ A+ I M G T D ++ ++ +L K+ +A E + M
Sbjct: 519 LIYNCCRMGC-LKEAIRIYEAMILEGHTRDHFTFNVLVTSLC--KAGKVAEAEEFMRCMT 575
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
GILP++V+++ LI+ G +AF +F EM + G P TY +L+ C G
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 181 SKAFHLHHEMVHKGFLPDF-VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A + FL + V YN L+ C G + +A+ +F M + +
Sbjct: 635 REA---------EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM------------- 286
PD+ +Y +ISGLC+ + V A E + + + L N+ Y +
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP-NKVMYTCFVDGMFKAGQWKAGI 744
Query: 287 ---EQLS------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
EQ+ D T +++I+ Y G +EK L MG+ + T ++LL+G
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 338 NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKA 397
+K R + +LL+ +P + +L+ +G + +++ +K
Sbjct: 805 SK--RKDVSTSFLLYRSIILNGILPDKLTCHSLV-----------LGICESNMLEIGLKI 851
Query: 398 HHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
+ + D +N+LI + E++ A+++ M G + A++ L+
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 458 DGRYNEMSWVIH 469
+ R+ E V+H
Sbjct: 912 NHRFQESRMVLH 923
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 155/344 (45%), Gaps = 33/344 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+ ++L EM ++ P+ TY L+H + + S + ++R +I G P T ++++
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+E+ L+IL+ RG+ D ++ +I E + AF++ K M
Sbjct: 837 -LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE--INWAFDLVKVMTSL 893
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI D T + ++ L R E+ + EM + G SP+ Y L+N C G+
Sbjct: 894 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 183 AFHLHHEMV-HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
AF + EM+ HK P V +A++ G+ EA + R M +M L P
Sbjct: 953 AFVVKEEMIAHK---------ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSC-LSLNEDTYETLMEQLSDEDTYSSLIN 300
S+ ++ CK ++A EL++ M +C L L D +Y+ LI
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMS---NCGLKL-------------DLVSYNVLIT 1047
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTT 344
A+GD+ A++L M DG+L++ T L+ GL +AR T
Sbjct: 1048 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL--LARET 1089
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E+ VL EM +G++P R Y LI+ C+ A V EMI P +A++
Sbjct: 917 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYC---HVICALLLPPEEKLGKAFEMKKDM 119
+ A G E L +LR M + L S+ H+ C + +A E++ M
Sbjct: 977 RALAKCGKADEATL-LLRFMLKMKLVPTIASFTTLMHLCC-----KNGNVIEALELRVVM 1030
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLM-NCYCLQG 178
+ G+ D V+Y VLI LC G ++ AF+L+ EM GF + TY L+ +
Sbjct: 1031 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM-KGDGFLANATTYKALIRGLLARET 1089
Query: 179 EFSKAFHLHHEMVHKGFL 196
FS A + +++ +GF+
Sbjct: 1090 AFSGADIILKDLLARGFI 1107
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 218/466 (46%), Gaps = 46/466 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA ++++M G P T+T L+H Q ++AS+AV + M+ +G P L TY A
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
VI N G ++AL +L +M + + AD V Y +I L + + AF++ M
Sbjct: 221 VI--NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC--KYKHMDDAFDLFNKM 276
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ KGI PD TY LI LC GR S+A L +ML + +PD + L++ + +G+
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN-INPDLVFFNALIDAFVKEGK 335
Query: 180 FSKAFHLHHEMVH-KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+A L+ EMV K PD +V YN LI G+C RV+E +E+FR M + GL
Sbjct: 336 LVEAEKLYDEMVKSKHCFPD--------VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
+TV+Y +I G + R+ A + +M +++ + +M TY+ L
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQM--------VSDGVHPDIM-------TYNIL 432
Query: 299 INDYLAQGDLEKAYQL-DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFR 357
++ G++E A + +Y+ D L D VT + ++ L K + E W L ++ +
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKL-DIVTYTTMIEALCKAGK-VEDGWDLFCSLSLK 490
Query: 358 CFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
P + Y T++ K ++ V +K + P+ YN LI
Sbjct: 491 GV-KPNVVTYTTMMSGFCRKGLKEEAD-----ALFVEMKEDGPL------PNSGTYNTLI 538
Query: 418 FDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
R + + + EM GF S L+ + +DGR ++
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDA-STFGLVTNMLHDGRLDK 583
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 37/354 (10%)
Query: 84 ERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
ER + C + + + KL A + DM P V + L+ + + +
Sbjct: 31 ERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK 90
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
L +M G S + +TY +N +C + + S A + +M+ G+
Sbjct: 91 FDLVISLGEQM-QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK--------LGY 141
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
PS+VT N+L+ G+C R+ EA+ + M EMG PDTV++ ++ GL + + +A
Sbjct: 142 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY 323
L M K C D TY ++IN +G+ + A L M
Sbjct: 202 LVERMVVK-GC--------------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 324 LSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV 383
+D V + +++GL K +A + L+ P Y+ LI N + R
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDA--FDLFNKMETKGIKPDVFTYNPLISCLCN--YGRWS 302
Query: 384 GPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMV 437
+ S ML N PD +N LI + ++ +A +Y EMV
Sbjct: 303 DASRLLS---------DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 217/491 (44%), Gaps = 62/491 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA ++++M+ G P+ T+ LIH ++AS+A+ + M+ +G P L TY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G ++A +L +M + L + Y +I L + + A + K+M
Sbjct: 227 VV--NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC--KYKHMDDALNLFKEM 282
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ KGI P+ VTY LI LC GR S+A L +M+ R +PD T+ L++ + +G+
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGK 341
Query: 180 FSKAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNA 212
+A L+ EMV + P VT GF P +VTYN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C RV+E +E+FR M + GL +TV+Y +I GL + + A E+ EM
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM---- 457
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
+++ +M TY++L++ G LEKA + + T ++
Sbjct: 458 ----VSDGVPPNIM-------TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
++ G+ K + E W L + + P + Y+T+I G S +
Sbjct: 507 MIEGMCKAGK-VEDGWDLFCNLSLKGV-KPDVVAYNTMIS-----------GFCRKGSKE 553
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
A M P+ YN LI R + + + EM GF S + L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-STIGLV 612
Query: 453 KALHYDGRYNE 463
+ +DGR ++
Sbjct: 613 TNMLHDGRLDK 623
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 212/503 (42%), Gaps = 62/503 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A VL +M G P+ T + L++ +C R S+AV + +M G+ P+ T+N +I
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
F A+ ++ M +G D V+Y V+ L + L AF + M+
Sbjct: 195 -GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL--AFNLLNKMEQGK 251
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P + Y +ID LC + +A +LF+EM + G P+ TY +L++C C G +S A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 184 FHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYG 216
L +M+ + PD T PS+VTY++LI G
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLS 276
+C R+ EA ++F M PD V+Y +I G CK + + E+ EM ++
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR----- 425
Query: 277 LNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
+ + TY+ LI GD + A ++ M DG + +T + LL+G
Sbjct: 426 ----------GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 337 LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAI 395
L K + +A +++ R P Y+ +IE C + + S+K
Sbjct: 476 LCKNGKLEKA--MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK--- 530
Query: 396 KAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
KPD YN +I R +A ++ EM G +P+ LI+A
Sbjct: 531 ---------GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 456 HYDGRYNEMSWVIHNTLRSCNLS 478
DG E S + +RSC +
Sbjct: 582 LRDGD-REASAELIKEMRSCGFA 603
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 171/438 (39%), Gaps = 65/438 (14%)
Query: 29 SFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLT 88
SF S A + V R ++ RG + ++ + AF+G + + + ++ GL+
Sbjct: 4 SFAIASTAKRFVH--RSLVVRGNAATVSPSFSFFWRRAFSG---KTSYDYREKLSRNGLS 58
Query: 89 ADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
E KL A + +M P + + L+ + + +
Sbjct: 59 -----------------ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI 101
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLV 208
L E + G + +TY L+NC+C + + A + +M+ G+ P++V
Sbjct: 102 SL-GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK--------LGYEPNIV 152
Query: 209 TYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
T ++L+ GYC R+ EA+ + M G P+TV++ +I GL + +A L M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 269 DKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
K C D TY ++N +GD + A+ L M G L V
Sbjct: 213 VAK-GC--------------QPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGV 256
Query: 329 TL-SVLLNGLNKIARTTEA--KWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGP 385
+ + +++GL K +A + + T R P + Y +LI N + R
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIR----PNVVTYSSLISCLCN--YGRWSDA 310
Query: 386 AITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHM 445
+ S M+ PD ++ LI + ++ +A +Y EMV P +
Sbjct: 311 SRLLS---------DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 446 FSVLALIKALHYDGRYNE 463
+ +LI R +E
Sbjct: 362 VTYSSLINGFCMHDRLDE 379
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 214/480 (44%), Gaps = 58/480 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA +++ M G P TY +++ C+ S A+ + R+M +R + TY+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G I+ A+ + +EM +G+ + V+Y ++ L K + KDM
Sbjct: 234 IIDSLCRDGC-IDAAISLFKEMETKGIKSSVVTYNSLVRGLC--KAGKWNDGALLLKDMV 290
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I+P+ +T+ VL+D G+L EA +L++EM+ RG SP+ TY LM+ YC+Q
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRL 349
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
S+A ++ MV SP +VT+ +LI GYC + RV + +++FR + + GL
Sbjct: 350 SEANNMLDLMVR--------NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSL 298
+ V+Y ++ G C+ + + L E+ ++ ++ L D TY L
Sbjct: 402 NAVTYSILVQGFCQSGK-----------------IKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF--F 356
++ G LEKA ++ + V + ++ G+ K + +A W +F
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA-----WNLFCSL 499
Query: 357 RCFGM-PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNL 415
C G+ P + Y +I G S+ A M P+ YN
Sbjct: 500 PCKGVKPNVMTYTVMIS-----------GLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSC 475
LI H R ++ + + EM GF S+ +I L +S + TLR C
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML--------LSAMKRLTLRYC 600
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 176/418 (42%), Gaps = 50/418 (11%)
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
A +L ++ + G D ++ +I L L E K+ +A + M + G PD VTY +
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFL--EGKVSEAVVLVDRMVENGCQPDVVTYNSI 199
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
++ +C G S A DL R+M R D TY +++ C G A L EM K
Sbjct: 200 VNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK- 257
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
G S+VTYN+L+ G C G+ + + + M + P+ +++ ++ K
Sbjct: 258 -------GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLME------QLSDED--------------- 293
+ +A EL EM + +S N TY TLM+ +LS+ +
Sbjct: 311 EGKLQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 294 -TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
T++SLI Y ++ ++ + G +++ VT S+L+ G + + A+ L+
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE--LF 426
Query: 353 TVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGT 411
+P + Y L++ C N + ++ A++ +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEK------------ALEIFEDLQKSKMDLGIV 474
Query: 412 VYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIH 469
+Y +I + +V A+N++ + G P++ + +I L G +E + ++
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 37/346 (10%)
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
LP V + + + + D F + L G + + +T ++NC+C + A+
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAY 143
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
+ +++ G+ PD T+N LI G G+V EA+ + M E G PD V+
Sbjct: 144 SVLGKVMKLGYEPD--------TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVT 195
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
Y +++G+C+ + A +L +M+++ ++ D + TYS++I+
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEER----NVKADVF-----------TYSTIIDSLCR 240
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
G ++ A L M G S VT + L+ GL K + + L V +P
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI--VPNV 298
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
I ++ L++ F + ++ A + + M+ P+ YN L+ +
Sbjct: 299 ITFNVLLD-----VFVK------EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
+ +A NM MV P + + +LIK R ++ V N
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 215/490 (43%), Gaps = 68/490 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + ++M GLTP T+ LI+ C E R +A + +M+ +G + TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
N G + AL +L +M E + D V Y +I L + A + +M +
Sbjct: 269 --NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC--KDGHHSDAQYLFSEMLE 324
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
KGI P+ TY +ID C GR S+A L R+M+ R +PD T+ L++ +G+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGKLF 383
Query: 182 KAFHLHHEMVHKGFLPDFVT------GF-----------------SPSLVTYNALIYGYC 218
+A L EM+H+ PD VT GF SP +VT+N +I YC
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLN 278
RV E +++ R + GL +T +Y +I G C++ A +L EM C
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC---- 499
Query: 279 EDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
D T + L+ + LE+A +L V+ D V +++++G+
Sbjct: 500 -----------PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 339 KIARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKA 397
K ++ EA W L ++ G+ P Y+ +I F K AI
Sbjct: 549 KGSKVDEA-WDLFCSLPIH--GVEPDVQTYNVMISG---------------FCGKSAISD 590
Query: 398 HHTMLH----GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
+ + H ++PD + YN LI ++ E+ K+ + EM GF F++ ++
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVA 649
Query: 454 ALHYDGRYNE 463
L DGR ++
Sbjct: 650 DLITDGRLDK 659
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 36/352 (10%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A+ + EM KG+ P+ TY C+I FC R S A ++ R+MI+R +P + T+NA+
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I + G E A ++ EM R + D V+Y +I F+ K M D
Sbjct: 373 ISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKH------NRFDDAKHMFD 425
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
PD VT+ +ID C R+ E L RE + R G + TY L++ +C +
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE-ISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
A L EM+ G PD +T N L+YG+C +++EALE+F + + D
Sbjct: 485 AAQDLFQEMISHGVCPD--------TITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 242 TVSYRQVISGLCK------------------IREPVKAYELKLEMDKKRSCLSLNEDTYE 283
TV+Y +I G+CK + V+ Y + + +S +S +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 284 TLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+ + D TY++LI L G+++K+ +L M +G+ D T+ ++
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 160/379 (42%), Gaps = 50/379 (13%)
Query: 112 AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLM 171
A + + M+ + I + ++ +LI C +LS + F + L + GF PD T+ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK-LTKLGFQPDVVTFNTLL 183
Query: 172 NCYCLQGEFSKAFHLHHEMVHKGFLPDFV-------TGFSPSLVTYNALIYGYCSLGRVQ 224
+ CL+ S+A L MV GFL G +P ++T+N LI G C GRV
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK-------------- 270
EA + M GL D V+Y +++G+CK+ + A L +M++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 271 KRSCLSLNEDTYETLMEQLSDED------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
R C + + L ++ ++ TY+ +I+ + + G A +L M
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKR-- 381
D +T + L++ K + EA+ L + RC P + Y+++I C +N F
Sbjct: 364 PDVLTFNALISASVKEGKLFEAE-KLCDEMLHRCI-FPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 382 -----LVGP-AITFSVKVAIKAHHTMLHGNYK-----------PDGTVYNLLIFDHSRSL 424
+ P +TF+ + + + + + T YN LI
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 425 EVHKAYNMYMEMVHYGFVP 443
++ A +++ EM+ +G P
Sbjct: 482 NLNAAQDLFQEMISHGVCP 500
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDT--Y 58
+ A+++ +EM G+ P T L++ FC+ + +A+++F E+I LDT Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMS-KIDLDTVAY 540
Query: 59 NAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
N +I G+ ++ A ++ +P G+ D +Y +I + + A +
Sbjct: 541 NIIIH-GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC--GKSAISDANVLFHK 597
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
M D G PD+ TY LI G + ++ +L EM GFS D T
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFT 644
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA E+ E + + Y +IH C+ S+ +A +F + G P + TYN
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 61 VIQTNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I + F G + I A + +M + G D +Y +I L E + K+ E+ +M
Sbjct: 578 MI--SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE--IDKSIELISEM 633
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
G D+ T +++ D L GRL ++F
Sbjct: 634 RSNGFSGDAFTIKMVAD-LITDGRLDKSF 661
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 175/368 (47%), Gaps = 29/368 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +L +M G P T L++ FC+ +R S AV + +M++ G+ P + YNA+I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ + A + +E+ +G+ + V+Y ++ L + A + DM K
Sbjct: 199 S-LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC--NSSRWSDAARLLSDMIKKK 255
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I P+ +TY L+D G++ EA +LF EM+ R PD TY +L+N CL +A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ MV KG L D +V+YN LI G+C RV++ +++FR M + GL +TV
Sbjct: 315 NQMFDLMVSKGCLAD--------VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y +I G + + KA E +MD ++ D + TY+ L+
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMD----FFGISPDIW-----------TYNILLGGLC 411
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
G+LEKA + M D VT + ++ G+ K + EA W L ++ + P
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA-WSLFCSLSLKGLK-PD 469
Query: 364 YIIYDTLI 371
+ Y T++
Sbjct: 470 IVTYTTMM 477
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 27/331 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A + +E+ KG+ P+ TYT L++ C SR S A ++ +MI + +P++ TY+A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G +E A E+ EM + D V+Y +I L L +++ +A +M M
Sbjct: 266 LLDAFVKNGKVLE-AKELFEEMVRMSIDPDIVTYSSLINGLCL--HDRIDEANQMFDLMV 322
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG L D V+Y LI+ C R+ + LFREM RG S + TY L+ + G+
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQAGDV 381
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
KA +M DF G SP + TYN L+ G C G +++AL IF M + +
Sbjct: 382 DKAQEFFSQM-------DFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D V+Y VI G+CK + +A+ L + K L D TY+++++
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK----GLKPDIV-----------TYTTMMS 478
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLS 331
+G L + L M +G + ++ TLS
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 33/340 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P Y +I S C+ R + A F+E+ +G P++ TY A
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK---K 117
++ + + A +L +M ++ +T + ++Y + LL K GK E K +
Sbjct: 231 LVNGLCNSSRWSDAA-RLLSDMIKKKITPNVITY-----SALLDAFVKNGKVLEAKELFE 284
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M I PD VTY LI+ LC R+ EA +F M+ +G + D +Y L+N +C
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA-DVVSYNTLINGFCKA 343
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
L EM +G + + VTYN LI G+ G V +A E F M G
Sbjct: 344 KRVEDGMKLFREMSQRGLVSN--------TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSS 297
+SPD +Y ++ GLC E KA + +M K+ E D TY++
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR---------------EMDLDIVTYTT 440
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
+I G +E+A+ L + G D VT + +++GL
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 154/374 (41%), Gaps = 46/374 (12%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
KL A ++ DM P V + L+ + + + L ++M G D +T+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTF 123
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
++NC+C + S A + +M+ G+ PD VT +L+ G+C RV +A+
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPD--------RVTIGSLVNGFCRRNRVSDAV 175
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ M E+G PD V+Y +I LCK + A++ E+++K + N TY L+
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG--IRPNVVTYTALVN 233
Query: 288 QLSDED----------------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLS 325
L + TYS+L++ ++ G + +A +L M
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 326 DNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGP 385
D VT S L+NGL R EA V C + + Y+TLI G
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC--LADVVSYNTLIN-----------GF 340
Query: 386 AITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHM 445
V+ +K M + YN LI ++ +V KA + +M +G P +
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 446 FSVLALIKALHYDG 459
++ L+ L +G
Sbjct: 401 WTYNILLGGLCDNG 414
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 187/382 (48%), Gaps = 32/382 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P T+T LIH ++AS+AV + M+ RG P L TY A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G ++AL +L +M + A+ V Y VI +L E A + +M
Sbjct: 224 VV--NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED--DALNLFTEM 279
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
++KG+ P+ +TY LI LC GR S+A L +M+ R +P+ T+ L++ + +G+
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK-INPNLVTFSALIDAFVKKGK 338
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
KA L+ EM+ + P++ TY++LI G+C L R+ EA ++ M
Sbjct: 339 LVKAEKLYEEMIKRSI--------DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P+ V+Y +I+G CK + K EL EM ++ + + TY++LI
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQR---------------GLVGNTVTYTTLI 435
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+ + D + A + M G + +T ++LL+GL K + AK +++ R
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL--AKAMVVFEYLQRST 493
Query: 360 GMPAYIIYDTLIEN-CSNNEFK 380
P Y+ +IE C ++K
Sbjct: 494 MEPDIYTYNIMIEGMCKAGKWK 515
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 137/329 (41%), Gaps = 39/329 (11%)
Query: 148 FDL---FREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS 204
FDL F E + G S + +TY L+NC+C S A L +M+ G+ PD
Sbjct: 94 FDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD------ 147
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
+VT N+L+ G+C R+ +A+ + M EMG PDTV++ +I GL + +A L
Sbjct: 148 --IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 265 KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
M +R C D TY +++N +GD + A L M
Sbjct: 206 IDRM-VQRGC--------------QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVG 384
++ V S +++ L K +A L+T P I Y +LI N + R
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDA--LNLFTEMENKGVRPNVITYSSLISCLCN--YGRWSD 306
Query: 385 PAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
+ S M+ P+ ++ LI + ++ KA +Y EM+ P+
Sbjct: 307 ASRLLS---------DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 445 MFSVLALIKALHYDGRYNEMSWVIHNTLR 473
+F+ +LI R E ++ +R
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIR 386
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 182/405 (44%), Gaps = 64/405 (15%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A VL+ M K +P TY +I S C + A+KV +++ P++ TY +I
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G G++ AL+++ EM RGL D +Y +I + E + +AFEM ++++ K
Sbjct: 236 EATMLEG-GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC--KEGMVDRAFEMVRNLELK 292
Query: 123 GILPDS-----------------------------------VTYEVLIDNLCWVGRLSEA 147
G PD VTY +LI LC G++ EA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 148 FDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSL 207
+L + M +G +PD ++Y L+ +C +G A M+ G LPD +
Sbjct: 353 MNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD--------I 403
Query: 208 VTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLE 267
V YN ++ C G+ +ALEIF + E+G SP++ SY + S L + ++A + LE
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 268 MDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDN 327
M +S D DE TY+S+I+ +G +++A++L M +
Sbjct: 464 M------MSNGID---------PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 328 VTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIE 372
VT +++L G K R +A L V C P Y LIE
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGC--RPNETTYTVLIE 551
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 139/321 (43%), Gaps = 47/321 (14%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN--- 59
EA ++++EM +GL P TY +I C+E +A ++ R + +G P + +YN
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 60 -------------------------------AVIQTNAFAGTGIEVALEILREMPERGLT 88
+++ T IE A+ +L+ M E+GLT
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 89 ADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
DA SY +I A E +L A E + M G LPD V Y ++ LC G+ +A
Sbjct: 366 PDAYSYDPLIAAFC--REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLV 208
++F + L G SP+ +Y + + G+ +A H+ EM+ G PD +
Sbjct: 424 EIFGK-LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD--------EI 474
Query: 209 TYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
TYN++I C G V EA E+ M P V+Y V+ G CK A + LE
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV-LES 533
Query: 269 DKKRSCLSLNEDTYETLMEQL 289
C NE TY L+E +
Sbjct: 534 MVGNGCRP-NETTYTVLIEGI 553
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +L+ M KGLTP +Y LI +FC+E R A++ MI G P + YN V+
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
T G + ALEI ++ E G + ++ SY + AL ++ +A M +M
Sbjct: 411 ATLCKNGKA-DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI--RALHMILEMMSN 467
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI PD +TY +I LC G + EAF+L +M F P TY ++ +C
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
A ++ MV G P+ TY LI G G EA+E+
Sbjct: 527 AINVLESMVG--------NGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 161/466 (34%), Gaps = 129/466 (27%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E+ +LE M KG P T LI F KAV+V E++++ P + YNA+I
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALI 165
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+C + ++ A + M K
Sbjct: 166 N-----------------------------GFCKM---------NRIDDATRVLDRMRSK 187
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
PD+VTY ++I +LC G+L A + ++L P TY L+ L+G +
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS-DNCQPTVITYTILIEATMLEGGVDE 246
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L EM+ +G P + TYN +I G C G V A E+ R + G PD
Sbjct: 247 ALKLMDEMLSRGL--------KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYE---TLMEQLSDED------ 293
+SY ++ L LN+ +E LM ++ E
Sbjct: 299 ISYNILLRAL------------------------LNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 294 TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWT 353
TYS LI G +E+A L +M G D + L+ + R
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR----------- 383
Query: 354 VFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVY 413
+ VAI+ TM+ PD Y
Sbjct: 384 -------------------------------------LDVAIEFLETMISDGCLPDIVNY 406
Query: 414 NLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDG 459
N ++ ++ + +A ++ ++ G P+ S + AL G
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 35/320 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A+++ EM GL +ERTYT LI+ + + +++ +M + G P+L TYN
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G + A ++ EM ERG++ + V+Y +I L E KL +A ++ M
Sbjct: 274 VM--NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC--REMKLNEANKVVDQM 329
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
GI P+ +TY LID C VG+L +A L R++ R G SP TY L++ +C +G+
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR-GLSPSLVTYNILVSGFCRKGD 388
Query: 180 FSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNA 212
S A + EM +G P VT G P + TY+
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI+G+C G++ EA +F+ M E P+ V Y +I G CK +A +L EM++K
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 273 SCLSLNEDTYETLMEQLSDE 292
L+ N +Y ++E L E
Sbjct: 509 --LAPNVASYRYMIEVLCKE 526
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 200/437 (45%), Gaps = 41/437 (9%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
++ LI C+ K+ + E+ + GFSP++ Y +I G IE A ++ E
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFE 223
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M + GL A+ +Y +I L +K G FEM + M + G+ P+ TY +++ LC
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQG--FEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
GR +AF +F EM RG S + TY L+ C + + ++A + +M G
Sbjct: 282 GRTKDAFQVFDEMRERG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI------ 334
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
+P+L+TYN LI G+C +G++ +AL + R + GLSP V+Y ++SG C+ + A
Sbjct: 335 --NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 262 YELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
++ EM+++ S + TY+ LI+ + ++EKA QL M
Sbjct: 393 AKMVKEMEERGIKPS---------------KVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKR 381
G + D T SVL++G + EA V C P +IY+T+I
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC--EPNEVIYNTMI---------- 485
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
+G S A+K M P+ Y +I + + +A + +M+ G
Sbjct: 486 -LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 442 VPHMFSVLALIKALHYD 458
P S+L+LI D
Sbjct: 545 DPST-SILSLISRAKND 560
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A +V +EM +G++ + TY LI C+E + ++A KV +M G +P+L TYN +I
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ F G G + AL + R++ RGL+ V+Y +++ + + G A +M K+M++
Sbjct: 346 --DGFCGVGKLGKALSLCRDLKSRGLSPSLVTY-NILVSGFCRKGDTSGAA-KMVKEMEE 401
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+GI P VTY +LID + +A L R + G PD HTY L++ +C++G+ +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQL-RLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A L MV K P+ V YN +I GYC G AL++ + M E L+P+
Sbjct: 461 EASRLFKSMVEK--------NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEM-----DKKRSCLSL 277
SYR +I LCK R+ +A L +M D S LSL
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSL 553
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 126/243 (51%), Gaps = 14/243 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +V+++M G+ P+ TY LI FC + KA+ + R++ RG SPSL TYN
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ + F G A ++++EM ERG+ V+Y +I + + KA +++ M
Sbjct: 379 LV--SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT--FARSDNMEKAIQLRLSM 434
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
++ G++PD TY VLI C G+++EA LF+ M+ + P+E Y ++ YC +G
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGS 493
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A L EM K +P++ +Y +I C + +EA + M + G+
Sbjct: 494 SYRALKLLKEMEEK--------ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Query: 240 PDT 242
P T
Sbjct: 546 PST 548
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 157/375 (41%), Gaps = 57/375 (15%)
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M D G +P S + L+ + ++ + F E ++ D +++ L+ C
Sbjct: 119 EMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE--NKSKVVLDVYSFGILIKGCCEA 176
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
GE K+F L E L +F GFSP++V Y LI G C G +++A ++F M ++G
Sbjct: 177 GEIEKSFDLLIE------LTEF--GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTY 295
L + +Y +I+GL K + +E+ YE + E + TY
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEM-----------------YEKMQEDGVFPNLYTY 271
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF 355
+ ++N G + A+Q+ M G + VT + L+ GL + + EA +
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ--- 328
Query: 356 FRCFGM-PAYIIYDTLIEN-------------CSNNEFKRLVGPAITFSVKV-------- 393
+ G+ P I Y+TLI+ C + + + L +T+++ V
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 394 ---AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
A K M KP Y +LI +RS + KA + + M G VP + +
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 451 LIKALHYDGRYNEMS 465
LI G+ NE S
Sbjct: 449 LIHGFCIKGQMNEAS 463
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 167/366 (45%), Gaps = 36/366 (9%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
G+ P TY L+ F R A + EM +GF P + TYN ++ G
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---- 310
Query: 75 ALEILREMPERGLTADAVSYCHVI--CALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYE 132
A E+LREM E GL D+VSY +I C+ L AF + +M +G++P TY
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCS----NNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
LI L ++ A L RE+ + G D TY L+N YC G+ KAF LH EM+
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREK-GIVLDSVTYNILINGYCQHGDAKKAFALHDEMM- 424
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
G P+ TY +LIY C + +EA E+F + G+ PD V ++ G
Sbjct: 425 -------TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477
Query: 253 CKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAY 312
C I +A+ L EMD +S+N D+ TY+ L+ +G E+A
Sbjct: 478 CAIGNMDRAFSLLKEMD----MMSIN-----------PDDVTYNCLMRGLCGEGKFEEAR 522
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIE 372
+L M G D+++ + L++G +K T A +++ P + Y+ L++
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA--FMVRDEMLSLGFNPTLLTYNALLK 580
Query: 373 NCSNNE 378
S N+
Sbjct: 581 GLSKNQ 586
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 169/336 (50%), Gaps = 30/336 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ EM KG P +TY ++ C E RAS+ V REM + G P +YN +I+
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIR 335
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ G +E+A EM ++G+ +Y +I L + E K+ A + +++ +KG
Sbjct: 336 GCSNNG-DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM--ENKIEAAEILIREIREKG 392
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I+ DSVTY +LI+ C G +AF L EM+ G P + TY +L+ C + + +A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMT-DGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L ++V KG PD LV N L+ G+C++G + A + + M M ++PD V
Sbjct: 452 DELFEKVVGKGMKPD--------LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y ++ GLC + +A EL EM K+R D +Y++LI+ Y
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEM-KRRGI--------------KPDHISYNTLISGYS 548
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+GD + A+ + M G+ +T + LL GL+K
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
A EVL EM GL P +Y LI A EM+ +G P+ TYN +I
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
F IE A ++RE+ E+G+ D+V+Y +I + K KAF + +M
Sbjct: 370 H-GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK--KAFALHDEMMTD 426
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI P TY LI LC + EA +LF +++ +G PD LM+ +C G +
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG-MKPDLVMMNTLMDGHCAIGNMDR 485
Query: 183 AFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIY 215
AF L EM PD VT G P ++YN LI
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCL 275
GY G + A + M +G +P ++Y ++ GL K +E A EL EM K +
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM--KSEGI 603
Query: 276 SLNEDTYETLMEQLSDEDTYSS 297
N+ ++ +++E +S+ D S
Sbjct: 604 VPNDSSFCSVIEAMSNLDAKKS 625
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 182/433 (42%), Gaps = 70/433 (16%)
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
++ A+E M E+G + H++ LL ++ A+ DM I + T+
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILT--LLSRLNRIENAWVFYADMYRMEIKSNVYTF 228
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
++I+ LC G+L +A F ++ G P TY L+ + L+G A + EM
Sbjct: 229 NIMINVLCKEGKLKKAKG-FLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
KGF PD + TYN ++ C+ GR A E+ R M E+GL PD+VSY +I G
Sbjct: 288 SKGFQPD--------MQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 252 LCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED------------------ 293
+ A+ + EM K+ + TY TL+ L E+
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFY--TYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 294 ----TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWY 349
TY+ LIN Y GD +KA+ L M DG T + L+ L + +T EA
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD-- 452
Query: 350 LLWTVFFRCFGM---PAYIIYDTLIE-NCSNNEFKR---LVGPAITFSVKVAIKAHHTML 402
+F + G P ++ +TL++ +C+ R L+ S+ ++ ++
Sbjct: 453 ---ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 403 HG--------------------NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFV 442
G KPD YN LI +S+ + A+ + EM+ GF
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 443 PHMFSVLALIKAL 455
P + + AL+K L
Sbjct: 570 PTLLTYNALLKGL 582
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A +L+EM + P + TY CL+ C E + +A ++ EM RG P +YN
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G + A + EM G ++Y ++ L E +L A E+ ++M
Sbjct: 543 LISGYSKKG-DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL--AEELLREMK 599
Query: 121 DKGILPDSVTYEVLIDNL 138
+GI+P+ ++ +I+ +
Sbjct: 600 SEGIVPNDSSFCSVIEAM 617
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 119/307 (38%), Gaps = 55/307 (17%)
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
+ S + ++ L+ C L V EA+E F M E G P T + +++ L ++ A+
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDED----------------------TYSSLIND 301
+M R + N T+ ++ L E TY++L+
Sbjct: 212 FYADM--YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM 361
+ +G +E A + M G+ D T + +L+ + R +E + + G+
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREM------KEIGL 323
Query: 362 -PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIK----AHHTMLHGNYKP-------- 408
P + Y+ LI CSNN + VK + ++T++HG +
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383
Query: 409 ------------DGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALH 456
D YN+LI + + + KA+ ++ EM+ G P F+ +LI L
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 457 YDGRYNE 463
+ E
Sbjct: 444 RKNKTRE 450
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 205/474 (43%), Gaps = 65/474 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + ++M GLTP T+ LI+ C E R +A + +M+ +G + TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
N G + AL +L +M E + D V Y +I L + A + +M +
Sbjct: 269 --NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC--KDGHHSDAQYLFSEMLE 324
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
KGI P+ TY +ID C GR S+A L R+M+ R +PD T+ L++ +G+
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGKLF 383
Query: 182 KAFHLHHEMVHKGFLPDFVT------GF-----------------SPSLVTYNALIYGYC 218
+A L EM+H+ PD VT GF SP +VT+N +I YC
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLN 278
RV E +++ R + GL +T +Y +I G C++ A +L EM C
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC---- 499
Query: 279 EDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
D T + L+ + LE+A +L V+ D V +++++G+
Sbjct: 500 -----------PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 339 KIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAH 398
K ++ EA W L ++ P Y+ +I F K AI
Sbjct: 549 KGSKVDEA-WDLFCSLPIHGVE-PDVQTYNVMISG---------------FCGKSAISDA 591
Query: 399 HTMLH----GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSV 448
+ + H ++PD + YN LI ++ E+ K+ + EM GF F++
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 176/385 (45%), Gaps = 36/385 (9%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A+ + EM KG+ P+ TY C+I FC R S A ++ R+MI+R +P + T+NA+
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I + G E A ++ EM R + D V+Y +I F+ K M D
Sbjct: 373 ISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYGFCKH------NRFDDAKHMFD 425
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
PD VT+ +ID C R+ E L RE + R G + TY L++ +C +
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE-ISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
A L EM+ G PD +T N L+YG+C +++EALE+F + + D
Sbjct: 485 AAQDLFQEMISHGVCPD--------TITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 242 TVSYRQVISGLCK------------------IREPVKAYELKLEMDKKRSCLSLNEDTYE 283
TV+Y +I G+CK + V+ Y + + +S +S +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 284 TLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIA 341
+ + D TY++LI L G+++K+ +L M +G+ D T+ + + +++
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656
Query: 342 RTTEAKWYLLWTVFFRCFGMPAYII 366
+ YL + +P Y++
Sbjct: 657 DEEIIENYLRPKINGETSSIPRYVV 681
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 163/388 (42%), Gaps = 50/388 (12%)
Query: 112 AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLM 171
A + + M+ + I + ++ +LI C +LS + F + L + GF PD T+ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK-LTKLGFQPDVVTFNTLL 183
Query: 172 NCYCLQGEFSKAFHLHHEMVHKGFLPDFV-------TGFSPSLVTYNALIYGYCSLGRVQ 224
+ CL+ S+A L MV GFL G +P ++T+N LI G C GRV
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK-------------- 270
EA + M GL D V+Y +++G+CK+ + A L +M++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 271 KRSCLSLNEDTYETLMEQLSDED------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
R C + + L ++ ++ TY+ +I+ + + G A +L M
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKR-- 381
D +T + L++ K + EA+ L + RC P + Y+++I C +N F
Sbjct: 364 PDVLTFNALISASVKEGKLFEAE-KLCDEMLHRCI-FPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 382 -----LVGP-AITFSVKVAIKAHHTMLHGNYK-----------PDGTVYNLLIFDHSRSL 424
+ P +TF+ + + + + + T YN LI
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALI 452
++ A +++ EM+ +G P + L+
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILL 509
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDT--Y 58
+ A+++ +EM G+ P T L++ FC+ + +A+++F E+I LDT Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMS-KIDLDTVAY 540
Query: 59 NAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
N +I G+ ++ A ++ +P G+ D +Y +I + + A +
Sbjct: 541 NIIIH-GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC--GKSAISDANVLFHK 597
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
M D G PD+ TY LI G + ++ +L EM GFS D T
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFT 644
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 190/399 (47%), Gaps = 50/399 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A ++++M G P T+T LIH ++AS+AV + M+ RG P+L TY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G I++A +L +M + A+ V Y VI +L E A + +M
Sbjct: 231 VV--NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED--DALNLFTEM 286
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
++KG+ P+ +TY LI LC R S+A L +M+ R +P+ T+ L++ + +G+
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGK 345
Query: 180 FSKAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNA 212
+A L+ EM+ + PD T GF P++VTYN
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI G+C R+ E +E+FR M + GL +TV+Y +I G + R+ A + +M
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM---- 461
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
+++ + +M TY++L++ G LEKA + + T ++
Sbjct: 462 ----VSDGVHPNIM-------TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLI 371
++ G+ K A E W L ++ + P IIY+T+I
Sbjct: 511 MIEGMCK-AGKVEDGWDLFCSLSLKGVK-PDVIIYNTMI 547
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A + EM +KG+ P+ TY+ LI C R S A ++ +MI+R +P++ T+NA+I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 63 QTNAFAGTGIEVALEIL-REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+AF G V E L EM +R + D +Y +I + ++L +A M + M
Sbjct: 338 --DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--HDRLDEAKHMFELMIS 393
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
K P+ VTY LI+ C R+ E +LFREM RG + TY L++ + +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG-LVGNTVTYTTLIHGFFQARDCD 452
Query: 182 KAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALI 214
A + +MV G P+ +T P++ TYN +I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK--IREPVKAYELKLEMD 269
G C G+V++ ++F + G+ PD + Y +ISG C+ ++E A K+ D
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 206/498 (41%), Gaps = 96/498 (19%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
E+M G++ + TY LI+ FC+ S+ S A+ + +M+ G+ PS+ T ++++ N +
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL--NGYC 166
Query: 69 -GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
G I A+ ++ +M E G D +++ +I L L K +A + M +G P+
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL--HNKASEAVALVDRMVQRGCQPN 224
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREM--------------------------------- 154
VTY V+++ LC G + AF+L +M
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 155 -LHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT------------ 201
+ G P+ TY +L++C C +S A L +M+ + P+ VT
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 202 ---------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
P + TY++LI G+C R+ EA +F M P+ V+Y
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQG 306
+I+G CK + + EL EM ++ + + TY++LI+ +
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQR---------------GLVGNTVTYTTLIHGFFQAR 449
Query: 307 DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYII 366
D + A + M DG + +T + LL+GL K + +A +++ R P
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA--MVVFEYLQRSKMEPTIYT 507
Query: 367 YDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLE 425
Y+ +IE C + + + S+K KPD +YN +I R
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLK------------GVKPDVIIYNTMISGFCRKGL 555
Query: 426 VHKAYNMYMEMVHYGFVP 443
+A ++ +M G +P
Sbjct: 556 KEEADALFRKMREDGPLP 573
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAE++ +EM + + P TY+ LI+ FC R +A +F MI + P++ TYN
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 61 VIQTNAFA-GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N F I+ +E+ REM +RGL + V+Y +I A + K M
Sbjct: 406 LI--NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF--QARDCDNAQMVFKQM 461
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G+ P+ +TY L+D LC G+L +A +F E L R P +TY ++ C G+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+ L + KG PD ++ YN +I G+C G +EA +FR M E G
Sbjct: 521 VEDGWDLFCSLSLKGVKPD--------VIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 240 PDT 242
PD+
Sbjct: 573 PDS 575
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 165/417 (39%), Gaps = 65/417 (15%)
Query: 107 EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+K + + M GI + TY +LI+ C ++S A L +M+ + G+ P T
Sbjct: 99 KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVT 157
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT------------------------- 201
+L+N YC S A L +MV G+ PD +T
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 202 --GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
G P+LVTY ++ G C G + A + M + + V Y VI LCK R
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLM------EQLSDED----------------TYSS 297
A L EM+ K + N TY +L+ E+ SD T+++
Sbjct: 278 DALNLFTEMENKG--VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFR 357
LI+ ++ +G L +A +L M D T S L+NG R EAK +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 358 CFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
CF P + Y+TLI N F + I V++ + L GN Y LI
Sbjct: 396 CF--PNVVTYNTLI-----NGFCK--AKRIDEGVELFREMSQRGLVGNT----VTYTTLI 442
Query: 418 FDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRS 474
++ + A ++ +MV G P++ + L+ L +G+ + V RS
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 174/369 (47%), Gaps = 36/369 (9%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A+++ ++M +G++P+ TYT LI CQ A A K+F EM G P +NA+
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ G +E A E+LR + G Y +I L + +AFE+ +M
Sbjct: 275 LDGFCKLGRMVE-AFELLRLFEKDGFVLGLRGYSSLIDGLF--RARRYTQAFELYANMLK 331
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
K I PD + Y +LI L G++ +A L M + G SPD + Y ++ C +G
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIKALCGRGLLE 390
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+ L EM PD T+ LI C G V+EA EIF + + G SP
Sbjct: 391 EGRSLQLEMSETESFPD--------ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 242 TVSYRQVISGLCKIREPVKAYEL--KLEMDKKRSC-LSLNED---TYETLMEQLS----- 290
++ +I GLCK E +A L K+E+ + S L L+ +++T++E S
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAY 502
Query: 291 -------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
D +Y+ LIN + GD++ A +L V+ G D+VT + L+NGL
Sbjct: 503 RDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Query: 338 NKIARTTEA 346
+++ R EA
Sbjct: 563 HRVGREEEA 571
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 200/499 (40%), Gaps = 82/499 (16%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT- 64
+ LEE+ G++ + LI ++ + A KAV+ F M + P + TYN +++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 65 ---NAFAGTGIEVALEILR-------------------------------EMPERGLTAD 90
F V E+L+ +M RG++ +
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 91 AVSYCHVICALLLPPEEKLGKAFEMKK---DMDDKGILPDSVTYEVLIDNLCWVGRLSEA 147
V+Y +I L + G A + +K +M G PDSV + L+D C +GR+ EA
Sbjct: 233 RVTYTILISGLC-----QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 148 FDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSL 207
F+L R + + GF Y +L++ +++AF L+ M+ K PD +
Sbjct: 288 FELLR-LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD--------I 338
Query: 208 VTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLE 267
+ Y LI G G++++AL++ MP G+SPDT Y VI LC + L+LE
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 268 MDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDN 327
M + E D T++ LI G + +A ++ + G
Sbjct: 399 MSET---------------ESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSV 443
Query: 328 VTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAI 387
T + L++GL K EA+ L G PA + + + N F +V
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKME----VGRPASLFLR--LSHSGNRSFDTMVESG- 496
Query: 388 TFSVKVAIKAHHTMLH---GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
+KA+ + H PD YN+LI R+ ++ A + + G P
Sbjct: 497 -----SILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPD 551
Query: 445 MFSVLALIKALHYDGRYNE 463
+ LI LH GR E
Sbjct: 552 SVTYNTLINGLHRVGREEE 570
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 35/295 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA E+L G R Y+ LI + R ++A +++ M+ + P + Y
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+IQ + AG IE AL++L MP +G++ D Y VI AL + G++ ++ +M
Sbjct: 344 LIQGLSKAGK-IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL--EMS 400
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ PD+ T+ +LI ++C G + EA ++F E + + G SP T+ L++ C GE
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTE-IEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 181 SKAFHLHHEM------------VHKGF------------------LPDFV-TGFSPSLVT 209
+A L H+M H G L F TG SP +V+
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
YN LI G+C G + AL++ + GLSPD+V+Y +I+GL ++ +A++L
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 172/409 (42%), Gaps = 54/409 (13%)
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALL-LPPEEKLGKAFEMKKDMDDKGILPDS 128
G ++ + L E+ G++ D+ +C +I A + EK ++F K+ D + PD
Sbjct: 106 NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCR---PDV 162
Query: 129 VTYEVLIDNLCWVGRLSE------AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
TY V++ + + E AF ++ EML + SP+ +T+ LM+ +G S
Sbjct: 163 FTYNVILRVM-----MREEVFFMLAFAVYNEML-KCNCSPNLYTFGILMDGLYKKGRTSD 216
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A + +M +G SP+ VTY LI G C G +A ++F M G PD+
Sbjct: 217 AQKMFDDMTGRGI--------SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS 268
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
V++ ++ G CK+ V+A+EL +K L L YSSLI+
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR---------------GYSSLIDGL 313
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
+A++L M D + ++L+ GL+K + +A L MP
Sbjct: 314 FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL--------SSMP 365
Query: 363 AY-IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS 421
+ I DT C N K L G + ++ M PD + +LI
Sbjct: 366 SKGISPDTY---CYNAVIKALCGRGL---LEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 422 RSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
R+ V +A ++ E+ G P + + ALI L G E ++H
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 118/290 (40%), Gaps = 39/290 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSL-----DT 57
EAEE+ E+ G +P T+ LI C+ +A + +M + G SL +
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRLSHS 484
Query: 58 YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK 117
N T +G+ I A L + G + D VSY +I + + A ++
Sbjct: 485 GNRSFDTMVESGS-ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD--IDGALKLLN 541
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+ KG+ PDSVTY LI+ L VGR EAF LF + F Y +LM C +
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF---YAKDDFRHSPAVYRSLMTWSCRK 598
Query: 178 GEFSKAFHLHHEMVHKGFLPD----------FVTGFSP----------------SLVTYN 211
+ AF+L + + K D F G + +L Y
Sbjct: 599 RKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYT 658
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
+ G C GR EAL +F + E + S ++I GLCK RE + A
Sbjct: 659 IWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCK-REQLDA 707
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 222/529 (41%), Gaps = 76/529 (14%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +L + G P+ T+ LI+ FC+ +A +F+ M RG P L Y+ +I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
AG + + ++ + +G+ D V + I + L A + K M +G
Sbjct: 330 GYFKAGM-LGMGHKLFSQALHKGVKLDVVVFSSTIDVYV--KSGDLATASVVYKRMLCQG 386
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I P+ VTY +LI LC GR+ EAF ++ ++L R G P TY +L++ +C G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 184 FHLHHEMVHKGFLPD------FVTGFSP---------------------SLVTYNALIYG 216
F L+ +M+ G+ PD V G S ++V +N+LI G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLS 276
+C L R EAL++FR M G+ PD ++ V+ V E +LE L
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR--------VSIMEGRLE-----EALF 552
Query: 277 LNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
L ++ +E D Y +LI+ + QL +M + +D +V+++
Sbjct: 553 LFFRMFKMGLE--PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 337 LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRL-------------- 382
L K R +A + + P + Y+T+I C +RL
Sbjct: 611 LFKCHRIEDASKF--FNNLIEGKMEPDIVTYNTMI--CGYCSLRRLDEAERIFELLKVTP 666
Query: 383 VGP-AITFSVKV-----------AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAY 430
GP +T ++ + AI+ M KP+ Y L+ S+S+++ ++
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 431 NMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSD 479
++ EM G P + S +I L GR +E + + H + + L D
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 208/492 (42%), Gaps = 79/492 (16%)
Query: 30 FCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTA 89
FC+ +KA+ R +++RGF + + N V++ + IEVA +L + + G
Sbjct: 228 FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLK--GLSVDQIEVASRLLSLVLDCGPAP 284
Query: 90 DAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD 149
+ V++C +I E + +AF++ K M+ +GI PD + Y LID G L
Sbjct: 285 NVVTFCTLINGFCKRGE--MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
LF + LH+G D + + ++ Y G+ + A ++ M+ +G SP++VT
Sbjct: 343 LFSQALHKG-VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI--------SPNVVT 393
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK---IREPVKAYELKL 266
Y LI G C GR+ EA ++ + + G+ P V+Y +I G CK +R YE +
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDED----------------------TYSSLINDYLA 304
+M + Y L++ LS + ++SLI+ +
Sbjct: 454 KMGYPPDVV-----IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM--- 361
++A ++ +MG G D T + ++ R EA + +FFR F M
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF-----LFFRMFKMGLE 563
Query: 362 PAYIIYDTLIEN-CSNNE-------FKRLVGPAITFSVKV----------------AIKA 397
P + Y TLI+ C + + F + I+ + V A K
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 398 HHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
+ ++ G +PD YN +I + + +A ++ + F P+ ++ LI H
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI---HV 680
Query: 458 DGRYNEMSWVIH 469
+ N+M I
Sbjct: 681 LCKNNDMDGAIR 692
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 187/461 (40%), Gaps = 74/461 (16%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A V + M +G++P+ TYT LI CQ+ R +A ++ +++ RG PS+ TY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I + F G + + +M + G D V Y ++ L + + A M
Sbjct: 432 LI--DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LSKQGLMLHAMRFSVKM 487
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ I + V + LID C + R EA +FR ++ G PD T+ +M ++G
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 180 FSKAFHLHHEMVHKGFLPD------FVTGF---------------------SPSLVTYNA 212
+A L M G PD + F S + N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIR---EPVKAYEL----- 264
+I+ R+++A + F + E + PD V+Y +I G C +R E + +EL
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 265 ----KLEMDKKRSCLSLNED------TYETLMEQLSDED--TYSSLINDYLAQGDLEKAY 312
+ + L N D + + E+ S + TY L++ + D+E ++
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG---MPAYIIYDT 369
+L M G V+ S++++GL K R EA +F + +P + Y
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT-----NIFHQAIDAKLLPDVVAYAI 781
Query: 370 LIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPD 409
LI C + RLV A+ + ML KPD
Sbjct: 782 LIRGYC---KVGRLVEAALLY---------EHMLRNGVKPD 810
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 218/513 (42%), Gaps = 73/513 (14%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +L + G P+ T+ LI+ FC+ +A +F+ M RG P L Y+ +I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
AG + + ++ + +G+ D V + I + L A + K M +G
Sbjct: 330 GYFKAGM-LGMGHKLFSQALHKGVKLDVVVFSSTIDVYV--KSGDLATASVVYKRMLCQG 386
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I P+ VTY +LI LC GR+ EAF ++ ++L R G P TY +L++ +C G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 184 FHLHHEMVHKGFLPD------FVTGFSP---------------------SLVTYNALIYG 216
F L+ +M+ G+ PD V G S ++V +N+LI G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI------SGLCKIREPVKAYEL--KLEM 268
+C L R EAL++FR M G+ PD ++ V+ CK +P +L ++
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 269 DKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
+K + +++ L + ED S N+ L +G +E D V
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDA-SKFFNN-LIEGKME---------------PDIV 608
Query: 329 TLSVLLNGLNKIARTTEA-KWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPA 386
T + ++ G + R EA + + L V FG P + LI C NN+
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKV--TPFG-PNTVTLTILIHVLCKNNDMDG----- 660
Query: 387 ITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMF 446
AI+ M KP+ Y L+ S+S+++ ++ ++ EM G P +
Sbjct: 661 -------AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 447 SVLALIKALHYDGRYNEMSWVIHNTLRSCNLSD 479
S +I L GR +E + + H + + L D
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 180/447 (40%), Gaps = 75/447 (16%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A V + M +G++P+ TYT LI CQ+ R +A ++ +++ RG PS+ TY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I + F G + + +M + G D V Y ++ L + + A M
Sbjct: 432 LI--DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG--LSKQGLMLHAMRFSVKM 487
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ I + V + LID C + R EA +FR ++ G PD T+ +M ++
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 180 FSK--------------------------------AFHLHHEMVHKGFLPDFVTG-FSPS 206
F K F H F + + G P
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
+VTYN +I GYCSL R+ EA IF + P+TV+ +I LCK + A +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
M +K S N TY LM+ S D+E +++L M G
Sbjct: 667 IMAEKGS--KPNAVTYGCLMDWFS-------------KSVDIEGSFKLFEEMQEKGISPS 711
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG---MPAYIIYDTLIEN-CSNNEFKRL 382
V+ S++++GL K R EA +F + +P + Y LI C + RL
Sbjct: 712 IVSYSIIIDGLCKRGRVDEAT-----NIFHQAIDAKLLPDVVAYAILIRGYC---KVGRL 763
Query: 383 VGPAITFSVKVAIKAHHTMLHGNYKPD 409
V A+ + ML KPD
Sbjct: 764 VEAALLY---------EHMLRNGVKPD 781
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 206/477 (43%), Gaps = 59/477 (12%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIE 73
KG++P +T I++FC+ + +AVK+F +M + G +P++ T+N VI G E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
A +M ERG+ ++Y ++ L +++G A+ + K+M KG P+ + Y
Sbjct: 314 -AFMFKEKMVERGMEPTLITYSILVKG--LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
LID+ G L++A ++ ++++ G S TY L+ YC G+ A L EM+
Sbjct: 371 LIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 194 GFLPD---------------------------FVTGFSPSLVTYNALIYGYCSLGRVQEA 226
GF + + SP LI G C G+ +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
LE++ G DT + ++ GLC+ + +A+ ++ E+ R C
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI-LGRGC------------ 536
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ D +Y++LI+ + L++A+ M G DN T S+L+ GL + + EA
Sbjct: 537 --VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNY 406
+ W R +P Y +I+ C E + + M+ N
Sbjct: 595 IQF--WDDCKRNGMLPDVYTYSVMIDGCCKAE-----------RTEEGQEFFDEMMSKNV 641
Query: 407 KPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
+P+ VYN LI + RS + A + +M H G P+ + +LIK + R E
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 201/471 (42%), Gaps = 73/471 (15%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VL+EM KG P+ Y LI SF + +KA+++ M+ +G S + TYN +I+
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALL------------------------ 102
G + A +L+EM G + S+ VIC L
Sbjct: 412 KNGQA-DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 103 ---------LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFRE 153
L K KA E+ +KG + D+ T L+ LC G+L EAF + +E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 154 MLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNAL 213
+L RG D +Y L++ C + + +AF EMV +G PD TY+ L
Sbjct: 531 ILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN--------YTYSIL 581
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I G ++ +V+EA++ + G+ PD +Y +I G CK + E EM K
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-- 639
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
++ +T Y+ LI Y G L A +L M H G ++ T + L
Sbjct: 640 --NVQPNTV-----------VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
+ G++ I+R EAK LL+ R G+ P Y LI+ +G + V+
Sbjct: 687 IKGMSIISRVEEAK--LLFEE-MRMEGLEPNVFHYTALIDGYGK------LGQMV--KVE 735
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
++ H+ N P+ Y ++I ++R V +A + EM G VP
Sbjct: 736 CLLREMHS---KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 42/445 (9%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
E+M +G+ P TY+ L+ + R A V +EM +GF P++ YN +I + A
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G+ + A+EI M +GL+ + +Y +I + A + K+M G +
Sbjct: 379 GS-LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC--KNGQADNAERLLKEMLSIGFNVNQ 435
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
++ +I LC A EML R SP L++ C G+ SKA L
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
+ ++KGF+ D T NAL++G C G++ EA I + + G D VSY +
Sbjct: 495 QFLNKGFVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
ISG C ++ +A+ EM K+ L D Y TYS LI +
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKR----GLKPDNY-----------TYSILICGLFNMNKV 591
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYD 368
E+A Q +G L D T SV+++G K RT E + + + P ++Y+
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF--FDEMMSKNVQPNTVVYN 649
Query: 369 TLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVH 427
LI C + + +A++ M H P+ Y LI S V
Sbjct: 650 HLIRAYCRSGR------------LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 428 KAYNMYMEMVHYGFVPHMFSVLALI 452
+A ++ EM G P++F ALI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 12/263 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA L+EM +GL P TY+ LI ++ +A++ + + G P + TY+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I A E E EM + + + V Y H+I A +L A E+++DM
Sbjct: 616 MIDGCCKA-ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC--RSGRLSMALELREDMK 672
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KGI P+S TY LI + + R+ EA LF EM G P+ Y L++ Y G+
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
K L EM K P+ +TY +I GY G V EA + M E G+ P
Sbjct: 732 VKVECLLREMHSKNV--------HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 241 DTVSYRQVISGLCKIREPVKAYE 263
D+++Y++ I G K ++A++
Sbjct: 784 DSITYKEFIYGYLKQGGVLEAFK 806
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 48/352 (13%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A D+F + ++G F P + T L+ EF K ++V KG SP
Sbjct: 210 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGV--------SPD 259
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
+ + I +C G+V+EA+++F M E G++P+ V++ VI GL +A+ K
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDED----------------------TYSSLINDYLA 304
+M ++ +L TY L++ L+ Y++LI+ ++
Sbjct: 320 KMVERGMEPTL--ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
G L KA ++ +M G + T + L+ G K + A+ LL + F +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER-LLKEMLSIGFNVNQG 436
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
+ CS+ F A++ ML N P G + LI +
Sbjct: 437 SFTSVICLLCSHLMFDS------------ALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTL-RSC 475
+ KA ++ + ++ GFV + AL+ L G+ +E + L R C
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 206/477 (43%), Gaps = 59/477 (12%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIE 73
KG++P +T I++FC+ + +AVK+F +M + G +P++ T+N VI G E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
A +M ERG+ ++Y ++ L +++G A+ + K+M KG P+ + Y
Sbjct: 314 -AFMFKEKMVERGMEPTLITYSILVKG--LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
LID+ G L++A ++ ++++ G S TY L+ YC G+ A L EM+
Sbjct: 371 LIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 194 GFLPD---------------------------FVTGFSPSLVTYNALIYGYCSLGRVQEA 226
GF + + SP LI G C G+ +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
LE++ G DT + ++ GLC+ + +A+ ++ E+ R C
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI-LGRGC------------ 536
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ D +Y++LI+ + L++A+ M G DN T S+L+ GL + + EA
Sbjct: 537 --VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNY 406
+ W R +P Y +I+ C E + + M+ N
Sbjct: 595 IQF--WDDCKRNGMLPDVYTYSVMIDGCCKAE-----------RTEEGQEFFDEMMSKNV 641
Query: 407 KPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
+P+ VYN LI + RS + A + +M H G P+ + +LIK + R E
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 201/471 (42%), Gaps = 73/471 (15%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VL+EM KG P+ Y LI SF + +KA+++ M+ +G S + TYN +I+
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALL------------------------ 102
G + A +L+EM G + S+ VIC L
Sbjct: 412 KNGQA-DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 103 ---------LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFRE 153
L K KA E+ +KG + D+ T L+ LC G+L EAF + +E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 154 MLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNAL 213
+L RG D +Y L++ C + + +AF EMV +G PD TY+ L
Sbjct: 531 ILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN--------YTYSIL 581
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I G ++ +V+EA++ + G+ PD +Y +I G CK + E EM K
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-- 639
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
++ +T Y+ LI Y G L A +L M H G ++ T + L
Sbjct: 640 --NVQPNTV-----------VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
+ G++ I+R EAK LL+ R G+ P Y LI+ +G + V+
Sbjct: 687 IKGMSIISRVEEAK--LLFEE-MRMEGLEPNVFHYTALIDGYGK------LGQMV--KVE 735
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
++ H+ N P+ Y ++I ++R V +A + EM G VP
Sbjct: 736 CLLREMHS---KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 42/445 (9%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
E+M +G+ P TY+ L+ + R A V +EM +GF P++ YN +I + A
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G+ + A+EI M +GL+ + +Y +I + A + K+M G +
Sbjct: 379 GS-LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC--KNGQADNAERLLKEMLSIGFNVNQ 435
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
++ +I LC A EML R SP L++ C G+ SKA L
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
+ ++KGF+ D T NAL++G C G++ EA I + + G D VSY +
Sbjct: 495 QFLNKGFVVDTRTS--------NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
ISG C ++ +A+ EM K+ L D Y TYS LI +
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKR----GLKPDNY-----------TYSILICGLFNMNKV 591
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYD 368
E+A Q +G L D T SV+++G K RT E + + + P ++Y+
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF--FDEMMSKNVQPNTVVYN 649
Query: 369 TLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVH 427
LI C + + +A++ M H P+ Y LI S V
Sbjct: 650 HLIRAYCRSGR------------LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 428 KAYNMYMEMVHYGFVPHMFSVLALI 452
+A ++ EM G P++F ALI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 12/263 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA L+EM +GL P TY+ LI ++ +A++ + + G P + TY+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I A E E EM + + + V Y H+I A +L A E+++DM
Sbjct: 616 MIDGCCKA-ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC--RSGRLSMALELREDMK 672
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KGI P+S TY LI + + R+ EA LF EM G P+ Y L++ Y G+
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
K L EM K P+ +TY +I GY G V EA + M E G+ P
Sbjct: 732 VKVECLLREMHSKNV--------HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 241 DTVSYRQVISGLCKIREPVKAYE 263
D+++Y++ I G K ++A++
Sbjct: 784 DSITYKEFIYGYLKQGGVLEAFK 806
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 48/352 (13%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A D+F + ++G F P + T L+ EF K ++V KG SP
Sbjct: 210 ALDVFPVLANKGMF-PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGV--------SPD 259
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
+ + I +C G+V+EA+++F M E G++P+ V++ VI GL +A+ K
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDED----------------------TYSSLINDYLA 304
+M ++ +L TY L++ L+ Y++LI+ ++
Sbjct: 320 KMVERGMEPTL--ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
G L KA ++ +M G + T + L+ G K + A+ LL + F +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER-LLKEMLSIGFNVNQG 436
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
+ CS+ F A++ ML N P G + LI +
Sbjct: 437 SFTSVICLLCSHLMFDS------------ALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTL-RSC 475
+ KA ++ + ++ GFV + AL+ L G+ +E + L R C
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 204/483 (42%), Gaps = 84/483 (17%)
Query: 26 LIHSFCQESRASKAVKVFRE----MIDRG-FSPSLDTYNAVIQTNA---FAGTG------ 71
L H E R ++VK F +I+ G + L+ Y+ V+ +N + G
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193
Query: 72 ---------IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
++ A+E+ R MPER D +YC ++ L EE++ +A + +M +
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC--KEERIDEAVLLLDEMQSE 251
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G P V Y VLID LC G L+ L M +G P+E TY L++ CL+G+ K
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV-PNEVTYNTLIHGLCLKGKLDK 310
Query: 183 AFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIY 215
A L MV +P+ VT G+ + Y+ LI
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCL 275
G G+ +EA+ ++R M E G P+ V Y ++ GLC+ +P +A E+ M CL
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCL 429
Query: 276 SLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN 335
+ Y TYSSL+ + G E+A Q+ M G + SVL++
Sbjct: 430 P---NAY-----------TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 336 GLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAI 395
GL + R EA ++W+ P + Y ++I K L G S+ A+
Sbjct: 476 GLCGVGRVKEA--MMVWSKMLTIGIKPDTVAYSSII--------KGLCGIG---SMDAAL 522
Query: 396 KAHHTML---HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
K +H ML +PD YN+L+ ++ +A ++ M+ G P + + +
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Query: 453 KAL 455
L
Sbjct: 583 NTL 585
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 24/357 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+T ++++ M+ KG P+E TY LIH C + + KAV + M+ P+ TY
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + A+ +L M ERG + Y +I L E K +A + + M
Sbjct: 333 LINGLVKQRRATD-AVRLLSSMEERGYHLNQHIYSVLISGLF--KEGKAEEAMSLWRKMA 389
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+KG P+ V Y VL+D LC G+ +EA ++ M+ G P+ +TY +LM + G
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL-PNAYTYSSLMKGFFKTGLC 448
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + EM TG S + Y+ LI G C +GRV+EA+ ++ M +G+ P
Sbjct: 449 EEAVQVWKEMDK--------TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
DTV+Y +I GLC I A +L EM L E + D TY+ L++
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEM------LCQEEPKSQ------PDVVTYNILLD 548
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFR 357
Q D+ +A L M G D +T + LN L++ + + + L + R
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 151/344 (43%), Gaps = 41/344 (11%)
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
+A DLF M+ ++ +++N +G + + + +V+ + SP
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS----NMNMNISP 185
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+ +++N +I C L V A+E+FRGMPE PD +Y ++ GLCK E + L
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK-EERIDEAVLL 244
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLS----------------------DEDTYSSLINDYL 303
L+ + C S + Y L++ L +E TY++LI+
Sbjct: 245 LDEMQSEGC-SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
+G L+KA L M + ++VT L+NGL K R T+A LL ++ R + +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA-VRLLSSMEERGYHLNQ 362
Query: 364 YIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRS 423
+ IY LI + FK G A + A+ M KP+ VY++L+ R
Sbjct: 363 H-IYSVLI----SGLFKE--GKA-----EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 424 LEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWV 467
+ ++A + M+ G +P+ ++ +L+K G E V
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 223/506 (44%), Gaps = 82/506 (16%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EAE L +M ++GL P TY LI +C+ A ++ + + GF P TY ++I
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
G AL + E +G+ + + Y +I L + + +A ++ +M +K
Sbjct: 364 DGLCHEGE-TNRALALFNEALGKGIKPNVILYNTLIKGL--SNQGMILEAAQLANEMSEK 420
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G++P+ T+ +L++ LC +G +S+A L + M+ +G F PD T+ L++ Y Q +
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF-PDIFTFNILIHGYSTQLKMEN 479
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A + M+ G PD + TYN+L+ G C + ++ +E ++ M E G +P+
Sbjct: 480 ALEILDVMLDNGVDPD--------VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
++ ++ LC+ R+ +A L EM K S+N D T+ +LI+ +
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNK----SVNPDAV-----------TFGTLIDGF 576
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
GDL+ AY L M + Y K++ +T P
Sbjct: 577 CKNGDLDGAYTLFRKM-EEAY---------------KVSSST-----------------P 603
Query: 363 AY-IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS 421
Y II E +V +A K M+ PDG Y L++
Sbjct: 604 TYNIIIHAFTEK---------------LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 422 RSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSE 481
++ V+ Y +EM+ GF+P + ++ +I L + R E + +IH ++ + ++
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA- 707
Query: 482 LLKVLNEI-DFSKPEMTALLDVLSEI 506
+N I D K E+ A VL ++
Sbjct: 708 ----VNTICDVDKKEVAAPKLVLEDL 729
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 195/459 (42%), Gaps = 52/459 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A +V M +G+TP ++T + SFC+ SR A+++ M +G ++ Y V+
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 63 Q---TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
F G E+ ++L A VS C LL K G E +K +
Sbjct: 189 GGFYEENFKAEGYELFGKML---------ASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 120 D---DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
D +G+LP+ TY + I LC G L A + ++ +G PD TY NL+ C
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGLCK 298
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+F +A +MV++G PD TYN LI GYC G VQ A I
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDS--------YTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
G PD +YR +I GLC E +A L E K + N Y TL++ LS+
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG--IKPNVILYNTLIKGLSN----- 403
Query: 297 SLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFF 356
QG + +A QL M G + + T ++L+NGL K+ ++A L V
Sbjct: 404 --------QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG--LVKVMI 453
Query: 357 RCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLL 416
P ++ LI G + ++ A++ ML PD YN L
Sbjct: 454 SKGYFPDIFTFNILIH-----------GYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 417 IFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
+ ++ + Y MV G P++F+ L+++L
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 147/321 (45%), Gaps = 41/321 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A+ +++ M KG P T+ LIH + + + A+++ M+D G P + TYN+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ N T E +E + M E+G + ++ ++ +L KL +A + ++M
Sbjct: 502 LL--NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC--RYRKLDEALGLLEEM 557
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+K + PD+VT+ LID C G L A+ LFR+M S TY +++ + +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 180 FSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNA 212
+ A L EMV + PD T GF PSL T
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI-REPVKAYELKLEMDKK 271
+I C RV EA I M + GL P+ V+ +C + ++ V A +L LE K
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT------ICDVDKKEVAAPKLVLEDLLK 731
Query: 272 RSCLSLNEDTYETLMEQLSDE 292
+SC++ YE L + L D+
Sbjct: 732 KSCITYY--AYELLFDGLRDK 750
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 208/533 (39%), Gaps = 132/533 (24%)
Query: 31 CQESRASKAVKVFREM-IDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPE----- 84
CQ+ KA+++F M + GF +L TY +VI+ + G E E+L +M E
Sbjct: 16 CQKD-PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGK-FEAMEEVLVDMRENVGNH 73
Query: 85 ---------------RGLTADAV----------------SYCHVICALLLPPEEKLGKAF 113
+G +AV SY ++ L+ +A
Sbjct: 74 MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV--DSGYFDQAH 131
Query: 114 EMKKDMDDKGILPDSVTYEVLIDNLCWVGR------------------------------ 143
++ M D+GI PD ++ + + + C R
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 144 -----LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
+E ++LF +ML G S T+ L+ C +G+ + L +++ +G LP+
Sbjct: 192 YEENFKAEGYELFGKMLA-SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 199 FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
L TYN I G C G + A+ + + E G PD ++Y +I GLCK
Sbjct: 251 --------LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK---N 299
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
K E ++ + K + L D+Y TY++LI Y G ++ A ++
Sbjct: 300 SKFQEAEVYLGKMVN-EGLEPDSY-----------TYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 319 GHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG---MPAYIIYDTLIENCS 375
+G++ D T L++GL T A +F G P I+Y+TLI+ S
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRA-----LALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 376 N-----------NEF--KRLVGPAITFSVKV-----------AIKAHHTMLHGNYKPDGT 411
N NE K L+ TF++ V A M+ Y PD
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 412 VYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
+N+LI +S L++ A + M+ G P +++ +L+ L ++ ++
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 212/471 (45%), Gaps = 64/471 (13%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA-GTGIEVALEILRE 81
Y ++++ C+ A +++ GF LD++ F G + AL++
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFV--LDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 82 MPERGLTA-DAVSYC---HVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
M + A ++VSY H +C + +L +AF +K M +KG P + TY VLI
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEV-----GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
LC G + +AF+LF EM+ RG P+ HTY L++ C G+ +A + +MV P
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
S++TYNALI GYC GRV A E+ M + P+ ++ +++ GLC++ +
Sbjct: 370 --------SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 258 PVKAYE-LKLEMDKKRSCLSLNEDTYETLMEQLSDED----------------------T 294
P KA LK +D LS + +Y L++ L E T
Sbjct: 422 PYKAVHLLKRMLDNG---LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 295 YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTV 354
++++IN + QG + A +M G D VT + L++G+ K+ +T +A + L V
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 355 FFRCFGMP--AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTV 412
R P +I D L + C E ++G + ++ + T++ DG +
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV------DGLI 592
Query: 413 YNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
RS ++ ++ + M G +P+++ +I L GR E
Sbjct: 593 ---------RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 182/382 (47%), Gaps = 43/382 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A + +EM +G P+ TYT LI C++ + +A V R+M+ PS+ TYNA+I
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 63 QTNAFAGTGIEV-ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKD 118
N + G V A E+L M +R + ++ ++ L ++GK A + K
Sbjct: 379 --NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC-----RVGKPYKAVHLLKR 431
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M D G+ PD V+Y VLID LC G ++ A+ L M + PD T+ ++N +C QG
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQG 490
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ A M+ KG D VTG LI G C +G+ ++AL I + +M +
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTG--------TTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 239 --SPDTVSY-RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY 295
+P +++ ++S CK++E +L M K + L L TY
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKE-------ELAMLGKINKLGLVPSVV-----------TY 584
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF 355
++L++ + GD+ ++++ +M G L + ++++NGL + R EA+ L +
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK--LLSAM 642
Query: 356 FRCFGMPAYIIYDTLIENCSNN 377
P ++ Y +++ NN
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNN 664
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 208/506 (41%), Gaps = 70/506 (13%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+L M + P+ RT+ L+ C+ + KAV + + M+D G SP + +YN +I
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G + A ++L M + D +++ +I A + + AF M KG
Sbjct: 450 GLCREGH-MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF--LGLMLRKG 506
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAF------------------DLFREMLHRG------- 158
I D VT LID +C VG+ +A ++ +ML +G
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 159 ---------GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
G P TY L++ G+ + +F + M G LP+ +
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN--------VYP 618
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
Y +I G C GRV+EA ++ M + G+SP+ V+Y ++ G + +A E M
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 270 KKRSCLSLNEDTYETLME-----QLSDEDTYSSLINDY-LAQGDLEKAYQLDYVMGHDGY 323
++ LN+ Y +L++ Q +++ S ++D L + D E +L V+ G
Sbjct: 679 ERG--YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGG 736
Query: 324 LSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRL 382
+ + L+ L K RT E+ L+ V R G+ D ++E+ CS + +
Sbjct: 737 CISGLCI-FLVTRLCKEGRTDESN-DLVQNVLER--GVFLEKAMDIIMESYCSKKKHTKC 792
Query: 383 VGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFV 442
+ IT +L + P + L+I + + +A + ME++ V
Sbjct: 793 M-ELITL-----------VLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGV 840
Query: 443 PHMFSVLALIKALHYDGRYNEMSWVI 468
VL ++ L + S VI
Sbjct: 841 VEKSGVLTYVECLMEGDETGDCSEVI 866
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 146/362 (40%), Gaps = 36/362 (9%)
Query: 112 AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLM 171
A+ + M+ G + + Y +++ LC G +EA ++F + + GF D H +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNG-YTEAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 172 NCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFR 231
+C A + M + +P+ V+Y+ LI+G C +GR++EA +
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKE-------VTCAPNSVSYSILIHGLCEVGRLEEAFGLKD 290
Query: 232 GMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD 291
M E G P T +Y +I LC KA+ L EM R C +
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM-IPRGCKP--------------N 335
Query: 292 EDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLL 351
TY+ LI+ G +E+A + M D +T + L+NG K R A + L
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA--FEL 393
Query: 352 WTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGT 411
TV + P ++ L+E R+ P A+ ML PD
Sbjct: 394 LTVMEKRACKPNVRTFNELMEG-----LCRVGKPY------KAVHLLKRMLDNGLSPDIV 442
Query: 412 VYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNT 471
YN+LI R ++ AY + M + P + A+I A G+ + S +
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 472 LR 473
LR
Sbjct: 503 LR 504
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+T + +LE M G P+ YT +I+ CQ R +A K+ M D G SP+ TY
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+++ G ++ ALE +R M ERG + Y ++ +L + D+
Sbjct: 657 MVKGYVNNGK-LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
Query: 121 DKGILPDSVTYEV----------------LIDNLCWVGRLSEAFDLFREMLHRGGFSPDE 164
+ P+ + + L+ LC GR E+ DL + +L RG F E
Sbjct: 716 LRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFL--E 773
Query: 165 HTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
+M YC + + +K L ++ GF+P F
Sbjct: 774 KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSF 808
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 211/474 (44%), Gaps = 51/474 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A +L EM L P +Y +I FC+ KA+++ EM G S SL T+ +I
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+AF G ++ A+ L+EM GL AD V Y +I E GKA + ++ +
Sbjct: 220 --DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA--LFDEVLE 275
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+G P ++TY LI C +G+L EA ++F M+ RG P+ +TY L++ C G+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLIDGLCGVGKTK 334
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A L + M+ K P+ VTYN +I C G V +A+EI M + PD
Sbjct: 335 EALQLLNLMIEKDE--------EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRS-----CLSLNE---------------DT 281
++Y ++ GLC + +A +L M K S +S N D
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 282 YETLMEQL--SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
Y+ L+E+L D T + L+N L GD+ KA +L + + ++ T + +++G K
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 340 IARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAH 398
AK L P+ Y+ L+ + C S+ A +
Sbjct: 507 TGMLNVAKGLLCKMRVSEL--QPSVFDYNCLLSSLCKEG------------SLDQAWRLF 552
Query: 399 HTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
M N PD +N++I ++ ++ A ++ + M G P +F+ LI
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 157/342 (45%), Gaps = 29/342 (8%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VL M +G + + L+ C+ KAV + REM P + +YN VI+
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR-GF 187
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
G +E ALE+ EM G + V++ +I A K+ +A K+M G+
Sbjct: 188 CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC--KAGKMDEAMGFLKEMKFMGLEA 245
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
D V Y LI C G L LF E+L RG SP TY L+ +C G+ +A +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
M+ + G P++ TY LI G C +G+ +EAL++ M E P+ V+Y
Sbjct: 305 FEFMIER--------GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQG 306
+I+ LCK A E+ M K+R+ D TY+ L+ A+G
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRT---------------RPDNITYNILLGGLCAKG 401
Query: 307 DLEKAYQLDYVMGHDGYLSDN--VTLSVLLNGLNKIARTTEA 346
DL++A +L Y+M D +D ++ + L++GL K R +A
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 197/437 (45%), Gaps = 53/437 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA L+EM GL YT LI FC + +F E+++RG SP TYN
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I+ F G ++ A EI M ERG+ + +Y +I L + K +A ++ M
Sbjct: 288 LIR--GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK--EALQLLNLM 343
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+K P++VTY ++I+ LC G +++A ++ E++ + PD TY L+ C +G+
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A L + M+ D P +++YNALI+G C R+ +AL+I+ + E +
Sbjct: 403 LDEASKLLYLMLKDSSYTD------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT----- 294
D V+ +++ K + KA EL ++ + + N DTY +++
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSK--IVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 295 -----------------YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
Y+ L++ +G L++A++L M D D V+ +++++G
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 338 NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRL--VGPAITFSVKVAI 395
K A+ L+ R P Y LI N F +L + AI+F K
Sbjct: 575 LKAGDIKSAESLLVG--MSRAGLSPDLFTYSKLI-----NRFLKLGYLDEAISFFDK--- 624
Query: 396 KAHHTMLHGNYKPDGTV 412
M+ ++PD +
Sbjct: 625 -----MVDSGFEPDAHI 636
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 202/480 (42%), Gaps = 66/480 (13%)
Query: 4 AEEVL---EEMYHKGLTPHERTYTCLIHSF----------CQES--RASKAVKVFREMID 48
A E+L E + K L P R Y+ L+++F C++S + AV VF++ +D
Sbjct: 9 AAEILRRDEHVVRKLLNP--RVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVD 66
Query: 49 RGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-CALLLPPEE 107
G S + N + E+A R+M E + VS ++ C + +
Sbjct: 67 SGSSLAFAGNN--LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQM---R 121
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
K G AF + M +G + + +L+ LC +A L REM R PD +Y
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSY 180
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
++ +C E KA L +EM KG +G S SLVT+ LI +C G++ EA+
Sbjct: 181 NTVIRGFCEGKELEKALELANEM--KG------SGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ M MGL D V Y +I G C E+D+ ++ ++ ++E
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCG----------ELDRGKA-------LFDEVLE 275
Query: 288 QLSD--EDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
+ TY++LI + G L++A ++ M G + T + L++GL + +T E
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 346 AKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGN 405
A L + P + Y+ +I + V A++ M
Sbjct: 336 A--LQLLNLMIEKDEEPNAVTYNIIINKLCKDGL-----------VADAVEIVELMKKRR 382
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYN-MYMEMVHYGFV-PHMFSVLALIKALHYDGRYNE 463
+PD YN+L+ ++ +A +Y+ + + P + S ALI L + R ++
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 208/476 (43%), Gaps = 65/476 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M + L ++ KG+ P TY LI ++ + +A ++ M +GFSP + TYN
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK-- 117
VI N G E A E+ EM GL+ D+ +Y LL K G E +K
Sbjct: 311 VI--NGLCKHGKYERAKEVFAEMLRSGLSPDSTTY-----RSLLMEACKKGDVVETEKVF 363
Query: 118 -DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
DM + ++PD V + ++ G L +A F + G PD Y L+ YC
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS-VKEAGLIPDNVIYTILIQGYCR 422
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+G S A +L +EM+ +G D +VTYN +++G C + EA ++F M E
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMD--------VVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
L PD+ + +I G CK+ A EL +M +KR L D TY+
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL---------------DVVTYN 519
Query: 297 SLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFF 356
+L++ + GD++ A ++ M L ++ S+L+N L EA + +W
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA--FRVWDEMI 577
Query: 357 RCFGMPAYIIYDTLIE------NCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDG 410
P +I +++I+ N S+ E +F K M+ + PD
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGE---------SFLEK--------MISEGFVPDC 620
Query: 411 TVYNLLIFDHSRSLEVHKAYNMY--MEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
YN LI+ R + KA+ + ME G VP +F+ ++ LH R N+M
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI---LHGFCRQNQM 673
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 206/474 (43%), Gaps = 65/474 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA E++ M KG +P TY +I+ C+ + +A +VF EM+ G SP TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G +E ++ +M R + D V + ++ L L KA +
Sbjct: 346 LLMEACKKGDVVETE-KVFSDMRSRDVVPDLVCFSSMMS--LFTRSGNLDKALMYFNSVK 402
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ G++PD+V Y +LI C G +S A +L EML + G + D TY +++ C +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTILHGLCKRKML 461
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A L +EM + PD T LI G+C LG +Q A+E+F+ M E +
Sbjct: 462 GEADKLFNEMTERALFPDS--------YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D V+Y ++ G K+ + A E+ +M K E L +YS L+N
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSK---------------EILPTPISYSILVN 558
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV-----LLNGLNKIARTTEAKWYLLWTVF 355
++G L +A+++ D +S N+ +V ++ G + ++ + + L +
Sbjct: 559 ALCSKGHLAEAFRV-----WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF-LEKMI 612
Query: 356 FRCFGMPAYIIYDTLI------ENCSN---------NEFKRLVGPAITFS---------- 390
F +P I Y+TLI EN S E LV T++
Sbjct: 613 SEGF-VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 391 -VKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
+K A M+ PD + Y +I + +A+ ++ EM+ GF P
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 37/333 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A + EM +G TY ++H C+ +A K+F EM +R P D+Y
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP--DSYTL 483
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMK 116
I + G ++ A+E+ ++M E+ + D V+Y LL K+G A E+
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY-----NTLLDGFGKVGDIDTAKEIW 538
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
DM K ILP ++Y +L++ LC G L+EAF ++ EM+ + P +++ YC
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN-IKPTVMICNSMIKGYCR 597
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
G S +M+ +GF+PD ++YN LIYG+ + +A + + M E
Sbjct: 598 SGNASDGESFLEKMISEGFVPD--------CISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 237 --GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
GL PD +Y ++ G C+ + +K E+ L +R +N D T
Sbjct: 650 QGGLVPDVFTYNSILHGFCR-QNQMKEAEVVLRKMIERG---VN-----------PDRST 694
Query: 295 YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDN 327
Y+ +IN +++Q +L +A+++ M G+ D+
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 170/431 (39%), Gaps = 58/431 (13%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
+ + +IH + R S A MI R L+ N++ T + G+ V ++R
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR- 173
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
+Y KL +A E + KG LI +L +
Sbjct: 174 -----------TYVQA---------RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI 213
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
G + A+ +++E + R G + +T ++N C G+ K ++ KG PD
Sbjct: 214 GWVELAWGVYQE-ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD--- 269
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
+VTYN LI Y S G ++EA E+ MP G SP +Y VI+GLCK + +A
Sbjct: 270 -----IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 262 YELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
E+ EM RS LS D TY SL+ + +GD+ + ++ M
Sbjct: 325 KEVFAEM--LRSGLS-------------PDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKR 381
+ D V S +++ + +A Y + +P +IY LI+
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMY--FNSVKEAGLIPDNVIYTILIQ--------- 418
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
G + VA+ + ML D YN ++ + + +A ++ EM
Sbjct: 419 --GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 442 VPHMFSVLALI 452
P +++ LI
Sbjct: 477 FPDSYTLTILI 487
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 136/345 (39%), Gaps = 49/345 (14%)
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY---FNLMNCYCLQGEFSKAF 184
S++ +I L GRLS+A M+ R G S E NC F
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 185 HLHHEM-----VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+ + H+ F GF+ S+ NALI +G V+ A +++ + G+
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
+ + +++ LCK +M+K + LS ++ D TY++LI
Sbjct: 233 INVYTLNIMVNALCK----------DGKMEKVGTFLSQVQEK-----GVYPDIVTYNTLI 277
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+ Y ++G +E+A++L M G+ T + ++NGL K + AK ++ R
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE--VFAEMLRSG 335
Query: 360 GMPAYIIYDTLI-ENCSNNEF------------KRLVGPAITFS-----------VKVAI 395
P Y +L+ E C + + +V + FS + A+
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 396 KAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
+++ PD +Y +LI + R + A N+ EM+ G
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 27/329 (8%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
++M G++ ++T LIH FC+ SR S A+ V +M+ G+ PS+ T+ +++
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
I A ++ M + G + V Y +I L E L A E+ +M+ KG+ D
Sbjct: 155 NR-IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE--LNIALELLNEMEKKGLGADV 211
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
VTY L+ LC+ GR S+A + R+M+ R +PD T+ L++ + QG +A L+
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
EM+ + P+ VTYN++I G C GR+ +A + F M G P+ V+Y +
Sbjct: 271 EMIQ--------SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
ISG CK R + +++ ++ SC N D + TY++LI+ Y G L
Sbjct: 323 ISGFCKFR----MVDEGMKLFQRMSCEGFNADIF-----------TYNTLIHGYCQVGKL 367
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
A + M D +T +LL+GL
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 172/370 (46%), Gaps = 46/370 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A VL +M G P T+ L+H FC +R A + M+ G+ P++ YN +I
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G + +ALE+L EM ++GL AD V+Y ++ L + A M +DM +
Sbjct: 185 GLCKNGE-LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG--RWSDAARMLRDMMKRS 241
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I PD VT+ LID G L EA +L++EM+ + P+ TY +++N C+ G A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMI-QSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 184 FHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYG 216
M KG P+ VT GF+ + TYN LI+G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLS 276
YC +G+++ AL+IF M ++PD +++ ++ GLC + +++ +K + D + S
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC-VNGEIESALVKFD-DMRES--- 415
Query: 277 LNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
E+ Y+ +I+ +EKA++L + +G D T ++++ G
Sbjct: 416 ----------EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 337 LNKIARTTEA 346
L K EA
Sbjct: 466 LCKNGPRREA 475
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 150/328 (45%), Gaps = 41/328 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+L EM KGL TY L+ C R S A ++ R+M+ R +P + T+ A+I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD--- 120
G ++ A E+ +EM + + + V+Y +I L + G+ ++ KK D
Sbjct: 255 VFVKQGN-LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH-----GRLYDAKKTFDLMA 308
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG P+ VTY LI C + E LF+ M G F+ D TY L++ YC G+
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG-FNADIFTYNTLIHGYCQVGKL 367
Query: 181 SKAFHLHHEMVHKGFLPDFVT------GFSPS---------------------LVTYNAL 213
A + MV + PD +T G + +V YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I+G C +V++A E+F +P G+ PD +Y +I GLCK +A EL M ++
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Query: 274 CLSLN-EDTYETLMEQLSDEDTYSSLIN 300
+N ED + +E+ S + SL++
Sbjct: 488 ICQMNAEDDH---LEEHSSSNKEISLVS 512
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 177/439 (40%), Gaps = 63/439 (14%)
Query: 44 REMIDRGFSPSL-DTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL 102
R +I G + S + V+ N G A RE G + H I
Sbjct: 2 RRLIVTGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTG-------FLHSI---- 50
Query: 103 LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP 162
+ AF + +M LP V + L+ + R E F + + G S
Sbjct: 51 -----RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRY-ETVIYFSQKMELYGISH 104
Query: 163 DEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
D +++ L++C+C S A + +M+ G+ PS+VT+ +L++G+C + R
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMK--------LGYEPSIVTFGSLLHGFCLVNR 156
Query: 223 VQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTY 282
+ +A + M + G P+ V Y +I GLCK E A EL EM+KK L + TY
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG--LGADVVTY 214
Query: 283 ETLMEQLS----------------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
TL+ L D T+++LI+ ++ QG+L++A +L M
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 321 DGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFK 380
+NVT + ++NGL R +AK CF P + Y+TLI
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF--PNVVTYNTLIS-------- 324
Query: 381 RLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
G V +K M + D YN LI + + ++ A +++ MV
Sbjct: 325 ---GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 441 FVPHMFSVLALIKALHYDG 459
P + + L+ L +G
Sbjct: 382 VTPDIITHCILLHGLCVNG 400
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 227/552 (41%), Gaps = 103/552 (18%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
AE+ EM G+ ++ + C + KA V REMI +GF P TY+ V+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DMD 120
A + +E+A + EM GL AD +Y +++ K G + +K +M
Sbjct: 492 YLCNA-SKMELAFLLFEEMKRGGLVADVYTY-----TIMVDSFCKAGLIEQARKWFNEMR 545
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ G P+ VTY LI ++S A +LF ML G P+ TY L++ +C G+
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYSALIDGHCKAGQV 604
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFS--------PSLVTYNALIYGYCSLGRVQEALEIFRG 232
KA + M +PD F P++VTY AL+ G+C RV+EA ++
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 233 MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME---QL 289
M G P+ + Y +I GLCK+ + +A E+K EM + +L TY +L++ ++
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY--TYSSLIDRYFKV 722
Query: 290 SDED-------------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTL 330
+D Y+ +I+ G ++AY+L +M G + VT
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 331 SVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNN-----------EF 379
+ +++G I + E LL + + P Y+ Y LI++C N E
Sbjct: 783 TAMIDGFGMIGK-IETCLELLERMGSKGVA-PNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 380 KRLVGPAITFSVKVAIKAHHTML-----------HGNYKPDGTVYNLLI----------- 417
K+ P T + I+ + + P +VY LLI
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 418 ---------------FDHSRSL-----------EVHKAYNMYMEMVHYGFVPHMFSVLAL 451
D+S + +V A+ ++ EM G +P M S +L
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 452 IKALHYDGRYNE 463
IK L + + +E
Sbjct: 961 IKGLFRNSKISE 972
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 211/478 (44%), Gaps = 54/478 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ + VL M +G P + + L+H++C S A K+ ++M+ G P YN
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNI 412
Query: 61 VIQT-----NAFAGTGIEVALEILREMPERGLTADAV---SYCHVICALLLPPEEKLGKA 112
+I + ++ +++A + EM G+ + + S+ +C+ K KA
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS-----AGKYEKA 467
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
F + ++M +G +PD+ TY +++ LC ++ AF LF EM RGG D +TY +++
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMVD 526
Query: 173 CYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRG 232
+C G +A +EM G +P++VTY ALI+ Y +V A E+F
Sbjct: 527 SFCKAGLIEQARKWFNEMRE--------VGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 233 MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDE 292
M G P+ V+Y +I G CK + KA ++ +R C S + + +Q D
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQI-----FERMCGSKDVPDVDMYFKQYDDN 633
Query: 293 D------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
TY +L++ + +E+A +L M +G + + L++GL K+ + EA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 347 KWYLLWTVFFRCFGMPAYI-IYDTLIENCSNNEFKRLVGPAITFSVK---VAIKAHHTML 402
+ G PA + Y +LI+ F VK +A K ML
Sbjct: 694 QEV---KTEMSEHGFPATLYTYSSLIDR--------------YFKVKRQDLASKVLSKML 736
Query: 403 HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
+ P+ +Y +I + + +AY + M G P++ + A+I G+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 179/442 (40%), Gaps = 98/442 (22%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A + EM G TP+ TYT LIH++ + + S A ++F M+ G P++ TY+A
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCH-----------VICALLLPPEEKL 109
+I + AG +E A +I M D Y V LL K
Sbjct: 594 LIDGHCKAGQ-VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 110 GKAFEMKKDMDD---KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+ E +K +D +G P+ + Y+ LID LC VG+L EA ++ EM GF +T
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM-SEHGFPATLYT 711
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV-------------------------- 200
Y +L++ Y A + +M+ P+ V
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 201 -TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
G P++VTY A+I G+ +G+++ LE+ M G++P+ V+YR +I CK
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 260 KAYELKLEMDK----------KRSCLSLNEDTYETL--MEQLSDEDT------------- 294
A+ L EM + ++ N++ E+L ++++ +DT
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 295 ------------------------------YSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
Y+SLI +E A+QL M G +
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 325 SDNVTLSVLLNGLNKIARTTEA 346
+ + L+ GL + ++ +EA
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEA 973
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 179/449 (39%), Gaps = 64/449 (14%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
L+ C+ S A++ + D F PS TYN +IQ ++ A I REM
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA-FLKADRLDSASLIHREMSLA 264
Query: 86 GLTADAVS---YCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVG 142
L D + + + +C K+GK E ++ + +PD+V Y LI LC
Sbjct: 265 NLRMDGFTLRCFAYSLC--------KVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL-QGEFSKAFHLHHEMVHKGFLPDFVT 201
EA D M P+ TY L+ C CL + + + + + M+ +G P
Sbjct: 317 LFEEAMDFLNRMRATSCL-PNVVTYSTLL-CGCLNKKQLGRCKRVLNMMMMEGCYP---- 370
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV-- 259
SP + +N+L++ YC+ G A ++ + M + G P V Y +I +C ++ +
Sbjct: 371 --SPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 260 -------KAYEL---------KLEMDKKRSCLSLN---EDTYETLMEQLS-----DEDTY 295
KAY K+ + CL E + + E + D TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF 355
S ++N +E A+ L M G ++D T +++++ K +A+ W
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK---WFNE 543
Query: 356 FRCFG-MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYN 414
R G P + Y LI L +++ A + TML P+ Y+
Sbjct: 544 MREVGCTPNVVTYTALIH-------AYLKAKKVSY----ANELFETMLSEGCLPNIVTYS 592
Query: 415 LLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
LI H ++ +V KA ++ M VP
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 132/354 (37%), Gaps = 51/354 (14%)
Query: 170 LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
L+ +C G FS A G L DF F PS TYN LI + R+ A I
Sbjct: 206 LVRKHCRNGSFSIALE------ELGRLKDF--RFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 230 FRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
R M L D + R LCK+ K R L+L E +
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKV-------------GKWREALTLVETE-----NFV 299
Query: 290 SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWY 349
D Y+ LI+ E+A M L + VT S LL G + K
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 350 LLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKP 408
L + C+ P I+++L+ C++ + A K M+ + P
Sbjct: 360 LNMMMMEGCYPSPK--IFNSLVHAYCTSGDH------------SYAYKLLKKMVKCGHMP 405
Query: 409 DGTVYNLLI------FDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYN 462
VYN+LI D + A Y EM+ G V + +V + + L G+Y
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 463 EMSWVIHNTLRSCNLSD-SELLKVLNEI-DFSKPEMTALLDVLSEIAMDGLLLD 514
+ VI + + D S KVLN + + SK E+ LL E+ GL+ D
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL--FEEMKRGGLVAD 517
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 163/338 (48%), Gaps = 37/338 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQ---ESRASKAVKVFREMIDRGFSPSLDT 57
M +A +V+E+M G +P+ +Y LI +C+ + KA V +EM++ SP+L T
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 58 YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK 117
+N +I + + ++++ +EM ++ + + +SY +I L K+ +A M+
Sbjct: 299 FNILID-GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC--NGGKISEAISMRD 355
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
M G+ P+ +TY LI+ C L EA D+F + +G P Y L++ YC
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRMYNMLIDAYCKL 414
Query: 178 GEFSKAFHLHHEMVHKGFLPD------FVTGFS--------------------PSLVTYN 211
G+ F L EM +G +PD + G P LVT++
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFH 474
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
L+ GYC G ++A + + M +MGL P ++Y V+ G CK A ++ +M+K+
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 272 RSCLSLNEDTYETLMEQLSDE---DTYSSLINDYLAQG 306
R L +N +Y L++ S + + + L+N+ L +G
Sbjct: 535 RR-LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 197/425 (46%), Gaps = 43/425 (10%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMPE 84
L+ + +E+R++ V++EMI R P++ T+N VI NA TG + A +++ +M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVI--NALCKTGKMNKARDVMEDMKV 251
Query: 85 RGLTADAVSYCHVICALL-LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
G + + VSY +I L K+ KA + K+M + + P+ T+ +LID
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
L + +F+EML + P+ +Y +L+N C G+ S+A + +MV G
Sbjct: 312 LPGSMKVFKEMLDQD-VKPNVISYNSLINGLCNGGKISEAISMRDKMVS--------AGV 362
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
P+L+TYNALI G+C ++EAL++F + G P T Y +I CK+ + +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY 323
LK EM+++ + D TY+ LI G++E A +L + G
Sbjct: 423 LKEEMERE---------------GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG- 466
Query: 324 LSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRL 382
L D VT +L+ G + + +A +L + P ++ Y+ +++ C K
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAA--MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK-- 522
Query: 383 VGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFV 442
A ++ + M + YN+L+ +S+ ++ A + EM+ G V
Sbjct: 523 --AATNMRTQMEKERRLRM-------NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Query: 443 PHMFS 447
P+ +
Sbjct: 574 PNRIT 578
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 41/275 (14%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+V +EM + + P+ +Y LI+ C + S+A+ + +M+ G P+L TYNA+I N
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI--N 374
Query: 66 AFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKDMDD 121
F ++ AL++ + +G Y +I A KLGK F +K++M+
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC-----KLGKIDDGFALKEEMER 429
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+GI+PD TY LI LC G + A LF ++ +G PD T+ LM YC +GE
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG--LPDLVTFHILMEGYCRKGESR 487
Query: 182 KAFHLHHEMVHKGFLPDFVT------GFSP----------------------SLVTYNAL 213
KA L EM G P +T G+ ++ +YN L
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
+ GY G++++A + M E GL P+ ++Y V
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA ++ + +G P R Y LI ++C+ + + EM G P + TYN
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I G IE A ++ ++ +GL D V++ ++ E + KA + K+M
Sbjct: 442 LIAGLCRNGN-IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESR--KAAMLLKEMS 497
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ P +TY +++ C G L A ++ +M + +Y L+ Y +G+
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 181 SKAFHLHHEMVHKGFLPDFVT 201
A L +EM+ KG +P+ +T
Sbjct: 558 EDANMLLNEMLEKGLVPNRIT 578
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 145/368 (39%), Gaps = 82/368 (22%)
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+++EM+ R P+ T+ ++N C G+ +KA + +M V G SP++V+
Sbjct: 210 VYKEMIRRK-IQPNVFTFNVVINALCKTGKMNKARDVMEDMK--------VYGCSPNVVS 260
Query: 210 YNALIYGYCSLG---RVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK---IREPVKAYE 263
YN LI GYC LG ++ +A + + M E +SP+ ++ +I G K + +K ++
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY 323
L+ D K + +S Y+SLIN G + +A + M G
Sbjct: 321 EMLDQDVKPNVIS------------------YNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 324 LSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV 383
+ +T + L+NG K EA FG
Sbjct: 363 QPNLITYNALINGFCKNDMLKEA---------LDMFG----------------------- 390
Query: 384 GPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
++K + P +YN+LI + + ++ + + EM G VP
Sbjct: 391 ----------SVKGQGAV------PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 444 HMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTALLDVL 503
+ + LI L +G E + + + L S L D +L E K E +L
Sbjct: 435 DVGTYNCLIAGLCRNGNI-EAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 504 SEIAMDGL 511
E++ GL
Sbjct: 494 KEMSKMGL 501
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI- 62
A+++ +++ KGL P T+ L+ +C++ + KA + +EM G P TYN V+
Sbjct: 455 AKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 63 ----QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
+ N A T + +E ER L + SY ++ + KL A + +
Sbjct: 514 GYCKEGNLKAATNMRTQME-----KERRLRMNVASYNVLLQGY--SQKGKLEDANMLLNE 566
Query: 119 MDDKGILPDSVTYEVL 134
M +KG++P+ +TYE++
Sbjct: 567 MLEKGLVPNRITYEIV 582
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 195/466 (41%), Gaps = 89/466 (19%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
+E M +G+ P Y CLI FC+ A K +M +G SPS++TYN +I
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI----- 466
Query: 68 AGTG----IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G G + +IL+EM + G + VSY +I L KL +A +K+DM+D+G
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC--KGSKLLEAQIVKRDMEDRG 524
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P Y +LID C G++ +AF +EML +G + TY L++ + G+ S+A
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEA 583
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L E+ KG PD + TYN+LI GY G VQ + ++ M G+ P
Sbjct: 584 EDLLLEISRKGLKPD--------VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 244 SYRQVISGLCKIREPVKAYE-LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+Y +IS LC +E ++ E L EM K L Y+ +++ Y
Sbjct: 636 TYHLLIS-LC-TKEGIELTERLFGEMSLKPDLL------------------VYNGVLHCY 675
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
GD+EKA+ L M D T + L+ G K+ + E +
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR--------------- 720
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
+LI+ + E +P+ YN+++ H
Sbjct: 721 ------SLIDEMNAREM---------------------------EPEADTYNIIVKGHCE 747
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVI 468
+ AY Y EM GF+ + L+ L + R E VI
Sbjct: 748 VKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVI 793
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 209/489 (42%), Gaps = 76/489 (15%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +AE++ +EM + L P TY LI +C+ K+ KV M PSL T+N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+++ F +E A +L+EM + G DA ++ + EK A + +
Sbjct: 290 LLK-GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG--YSSNEKAEAALGVYETAV 346
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLF-REMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D G+ ++ T +L++ LC G++ +A ++ REM G P+E Y +++ YC +G+
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK--GLVPNEVIYNTMIDGYCRKGD 404
Query: 180 FSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNA 212
A M +G PD + G SPS+ TYN
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI GY + +I + M + G P+ VSY +I+ LCK + ++A +K +M+ +
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
+ Y+ LI+ ++G +E A++ M G + VT +
Sbjct: 525 VSPKVR---------------IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITF--- 389
L++GL+ + +EA+ LL R P Y++LI S F V I
Sbjct: 570 LIDGLSMTGKLSEAEDLLLE--ISRKGLKPDVFTYNSLI---SGYGFAGNVQRCIALYEE 624
Query: 390 ----SVKVAIKAHHTML----------------HGNYKPDGTVYNLLIFDHSRSLEVHKA 429
+K +K +H ++ + KPD VYN ++ ++ ++ KA
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Query: 430 YNMYMEMVH 438
+N+ +M+
Sbjct: 685 FNLQKQMIE 693
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 16/271 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA+ V +M +G++P R Y LI C + + A + +EM+ +G +L TYN
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G + A ++L E+ +GL D +Y +I + + + ++M
Sbjct: 570 LIDGLSMTGK-LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG--NVQRCIALYEEMK 626
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
GI P TY +LI +LC E +L + PD Y +++CY + G+
Sbjct: 627 RSGIKPTLKTYHLLI-SLCT----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
KAF+L +M+ K D TYN+LI G +G++ E + M + P
Sbjct: 682 EKAFNLQKQMIEKSIGLD--------KTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
+ +Y ++ G C++++ + AY EM +K
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 191/502 (38%), Gaps = 84/502 (16%)
Query: 19 HERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTY----NAVIQTNAFAGTGIEV 74
H+ +Y L + S+A +F + + G PS D+ + +++T F T I V
Sbjct: 108 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVT-INV 166
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
L IL E Y I A + + +GK E+ M I P Y VL
Sbjct: 167 FLNIL----ESDFRPSKFMYGKAIQAAVKLSD--VGKGLELFNRMKHDRIYPSVFIYNVL 220
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
ID LC R+++A LF EML R P TY L++ YC G K+F + M
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARR-LLPSLITYNTLIDGYCKAGNPEKSFKVRERMK--- 276
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC- 253
PSL+T+N L+ G G V++A + + M ++G PD ++ + G
Sbjct: 277 -----ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 254 --KIREPVKAYELKLE----MDKKRSCLSLN--------EDTYETLMEQLS-----DEDT 294
K + YE ++ M+ + LN E E L +++ +E
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 295 YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN------------------G 336
Y+++I+ Y +GDL A M G D++ + L+
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 337 LNKIARTTEAKWYLLWTV-----FFRCFG----------MPAYIIYDTLIENCSNNEFKR 381
L ++ + E L+ F +CF MP + Y TLI NC K
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-NCLCKGSKL 510
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
L + M P +YN+LI ++ A+ EM+ G
Sbjct: 511 LEAQIV----------KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 442 VPHMFSVLALIKALHYDGRYNE 463
++ + LI L G+ +E
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSE 582
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 199/458 (43%), Gaps = 47/458 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A + EEM +GL P TY +I F + R V F EM D P + TYNA+I
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI- 339
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
N F G + + LE REM GL + VSY ++ A E + +A + DM
Sbjct: 340 -NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC--KEGMMQQAIKFYVDMRRV 396
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G++P+ TY LID C +G LS+AF L EML G + TY L++ C +
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG-VEWNVVTYTALIDGLCDAERMKE 455
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L +M G +P+ L +YNALI+G+ + ALE+ + G+ PD
Sbjct: 456 AEELFGKMDTAGVIPN--------LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSC-LSLNEDTYETLMEQLSDEDTYSSLIND 301
+ Y I GLC + E ++A K+ M++ + C + N Y TLM+
Sbjct: 508 LLYGTFIWGLCSL-EKIEA--AKVVMNEMKECGIKANSLIYTTLMDA------------- 551
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM 361
Y G+ + L M VT VL++GL K ++A Y + FG+
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY--FNRISNDFGL 609
Query: 362 PA-YIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFD 419
A I+ +I+ C +N+ V+ A M+ PD T Y L+
Sbjct: 610 QANAAIFTAMIDGLCKDNQ------------VEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 420 HSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
+ + V +A + +M G + + +L+ L +
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 148/330 (44%), Gaps = 31/330 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EAEE+ +M G+ P+ +Y LIH F + +A+++ E+ RG P L Y
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLP--PEEKLGKAFEMKKD 118
I + IE A ++ EM E G+ A+++ Y ++ A P E L EM K+
Sbjct: 513 FIW-GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KE 570
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+D I VT+ VLID LC +S+A D F + + G + + +++ C
Sbjct: 571 LD---IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ A L +MV KG +PD Y +L+ G G V EAL + M E+G+
Sbjct: 628 QVEAATTLFEQMVQKGLVPD--------RTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
D ++Y ++ GL + KA EM + E + DE S+
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEM--------IGEGIH-------PDEVLCISV 724
Query: 299 INDYLAQGDLEKAYQLD-YVMGHDGYLSDN 327
+ + G +++A +L Y+M H SDN
Sbjct: 725 LKKHYELGCIDEAVELQSYLMKHQLLTSDN 754
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 115/252 (45%), Gaps = 27/252 (10%)
Query: 99 CALLLPPEEKLGKAFEMK---KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREML 155
C LL KLGK ++K KDM G P TY ++ID +C G + A LF EM
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 156 HRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIY 215
RG PD TY ++++ + G EM PD ++TYNALI
Sbjct: 290 FRG-LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD--------VITYNALIN 340
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCL 275
+C G++ LE +R M GL P+ VSY ++ CK E + +K +D +R L
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK--EGMMQQAIKFYVDMRRVGL 398
Query: 276 SLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN 335
N E TY+SLI+ G+L A++L M G + VT + L++
Sbjct: 399 VPN-------------EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 336 GLNKIARTTEAK 347
GL R EA+
Sbjct: 446 GLCDAERMKEAE 457
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 153/351 (43%), Gaps = 28/351 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A + +M GL P+E TYT LI + C+ S A ++ EM+ G ++ TY A
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I A E A E+ +M G+ + SY +I + + + +A E+ ++
Sbjct: 443 LIDGLCDAERMKE-AEELFGKMDTAGVIPNLASYNALIHGFV--KAKNMDRALELLNELK 499
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+GI PD + Y I LC + ++ A + EM G + Y LM+ Y G
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYTTLMDAYFKSGNP 558
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIF-RGMPEMGLS 239
++ HL EM ++VT+ LI G C V +A++ F R + GL
Sbjct: 559 TEGLHLLDEMKE--------LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
+ + +I GLCK + A L +M +K + D Y+SL+
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK---------------GLVPDRTAYTSLM 655
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
+ QG++ +A L M G D + + L+ GL+ + +A+ +L
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 124/315 (39%), Gaps = 35/315 (11%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNC-YCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS- 204
AF F+ + R GF +Y + + +C + + L ++ K F +S
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184
Query: 205 -----PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
P ++AL LG ++EA++ F M + P T S ++ K+ +
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMG 319
+M + T+ TY+ +I+ +GD+E A L M
Sbjct: 245 DVKRFFKDM--------IGAGARPTVF-------TYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 320 HDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEF 379
G + D VT + +++G K+ R + + C P I Y+ LI NC +F
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC--EPDVITYNALI-NCF-CKF 345
Query: 380 KRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHY 439
+L + ++ + M KP+ Y+ L+ + + +A Y++M
Sbjct: 346 GKL---------PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 440 GFVPHMFSVLALIKA 454
G VP+ ++ +LI A
Sbjct: 397 GLVPNEYTYTSLIDA 411
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 190/441 (43%), Gaps = 41/441 (9%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
AE V +EM +G+ P +Y ++ ++ + +A + MI RGF P D +
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIP--DNATCTLI 258
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
A G + A+ R+M + G + +++ +I L + + +AFEM ++M
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC--KKGSIKQAFEMLEEMVRN 316
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G P+ T+ LID LC G +AF LF +++ + P+ HTY +++ YC + + ++
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L M +G P+ + TY LI G+C G A E+ M + G P+
Sbjct: 377 AEMLFSRMKEQGLFPN--------VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 428
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+Y I LCK +AYEL ++K SC L D TY+ LI +
Sbjct: 429 YTYNAAIDSLCKKSRAPEAYEL---LNKAFSC-GLEADGV-----------TYTILIQEQ 473
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
Q D+ +A M G+ +D ++L+ + + E++ L+ + +P
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE--RLFQLVVSLGLIP 531
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
Y ++I +C E + +A+K H M PD Y LI +
Sbjct: 532 TKETYTSMI-SCYCKE----------GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Query: 423 SLEVHKAYNMYMEMVHYGFVP 443
V +A +Y M+ G P
Sbjct: 581 KSMVDEACKLYEAMIDRGLSP 601
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 209/460 (45%), Gaps = 47/460 (10%)
Query: 25 CLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPE 84
C++ +F + R ++AV + +M ++G +PS T N V++ G IE A + EM
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGL-IEYAENVFDEMSV 210
Query: 85 RGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRL 144
RG+ D+ SY ++ + K+ +A M +G +PD+ T +++ LC G +
Sbjct: 211 RGVVPDSSSYKLMVIGCF--RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 145 SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS 204
+ A FR+M+ GF P+ + +L++ C +G +AF + EMV G+
Sbjct: 269 NRAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR--------NGWK 319
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL-SPDTVSYRQVISGLCKIREPVKAYE 263
P++ T+ ALI G C G ++A +F + P+ +Y +I G CK
Sbjct: 320 PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK--------- 370
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
DK L+ E + + EQ + +TY++LIN + G +AY+L +MG +
Sbjct: 371 ----EDK----LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLI-ENCSNNEFK 380
G++ + T + ++ L K +R EA Y L F C + Y LI E C N+
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEA--YELLNKAFSCGLEADGVTYTILIQEQCKQND-- 478
Query: 381 RLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
+ A+ F + M ++ D + N+LI R ++ ++ ++ +V G
Sbjct: 479 --INQALAFFCR--------MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 441 FVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDS 480
+P + ++I +G + HN R + DS
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 139/317 (43%), Gaps = 19/317 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ AE + M +GL P+ TYT LI+ C+ +A ++ M D GF P++ TYNA
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I + E A E+L + GL AD V+Y +I + + +A M+
Sbjct: 434 AIDSLCKKSRAPE-AYELLNKAFSCGLEADGVTYTILIQEQC--KQNDINQALAFFCRMN 490
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G D +LI C ++ E+ LF +++ G P + TY ++++CYC +G+
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLF-QLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A H M G +PD TY +LI G C V EA +++ M + GLSP
Sbjct: 550 DLALKYFHNMKRHGCVPDS--------FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
V+ + CK + A L +DKK L T TL+ +L E +
Sbjct: 602 PEVTRVTLAYEYCKRNDSANAMILLEPLDKK-----LWIRTVRTLVRKLCSEKKVG--VA 654
Query: 301 DYLAQGDLEKAYQLDYV 317
Q LEK D V
Sbjct: 655 ALFFQKLLEKDSSADRV 671
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 223/510 (43%), Gaps = 66/510 (12%)
Query: 13 HKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI--QTNAFAGT 70
H P + + + ++ E + A+++F++MI P+L T N ++ +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 71 GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM-DDKGILPDSV 129
I A E+ +M + G++ + ++ ++ L E KL A M + M + + PD+V
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCL--EGKLEDALGMLERMVSEFKVNPDNV 241
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
TY ++ + GRLS+ +L +M + G P+ TY NL+ YC G +AF +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDM-KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M LPD L TYN LI G C+ G ++E LE+ M + L PD V+Y +I
Sbjct: 301 MKQTNVLPD--------LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED---------------- 293
G ++ ++A +L +M+ + N+ T+ ++ L E+
Sbjct: 353 DGCFELGLSLEARKLMEQME--NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 294 -------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
TY +LI YL GDL A ++ MG G + +TL+ +L+ L K + EA
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLI------ENCSN-----NEFKRL-VGPAI-TFSVKV 393
LL + R F + + Y TLI E +E K++ + P + TF+ +
Sbjct: 471 -HNLLNSAHKRGF-IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 394 AIKAHH-----------TMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFV 442
HH + PD + +N +I + + V KA+ Y E + + F
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 443 PHMFSVLALIKALHYDGRYNEMSWVIHNTL 472
P ++ L+ L +G E + NTL
Sbjct: 589 PDNYTCNILLNGLCKEG-MTEKALNFFNTL 617
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 207/495 (41%), Gaps = 104/495 (21%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++ +E+L +M GL P+ TY L++ +C+ +A ++ M P L TYN
Sbjct: 256 LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNI 315
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK--- 117
+I AG+ E LE++ M L D V+Y +I +LG + E +K
Sbjct: 316 LINGLCNAGSMRE-GLELMDAMKSLKLQPDVVTYNTLIDGCF-----ELGLSLEARKLME 369
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
M++ G+ + VT+ + + LC + +E++ GFSPD TY L+ Y
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTY 210
G+ S A + EM KG + +T GF VTY
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 211 NALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK 270
LI G+ +V++ALE++ M ++ ++P ++ +I GLC + +L M+K
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH------HGKTELAMEK 543
Query: 271 KRSCLSLNEDTYETLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
++ L E L D+ T++S+I Y +G +EKA++ + DN
Sbjct: 544 -----------FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 329 TLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAIT 388
T ++LLNGL K T +A + ++TLIE +R V
Sbjct: 593 TCNILLNGLCKEGMTEKALNF-----------------FNTLIE-------EREV----- 623
Query: 389 FSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSV 448
D YN +I + ++ +AY++ EM G P F+
Sbjct: 624 --------------------DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Query: 449 LALIKALHYDGRYNE 463
+ I L DG+ +E
Sbjct: 664 NSFISLLMEDGKLSE 678
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E +E+ GL P + T+ +I +C+E R KA + + E I F P D Y I
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP--DNYTCNIL 597
Query: 64 TNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
N G+ E AL + E D V+Y +I A ++KL +A+++ +M++K
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFC--KDKKLKEAYDLLSEMEEK 654
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGG 159
G+ PD TY I L G+LSE +L ++ + G
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 33/328 (10%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT 70
M G P T+T L++ C E R +A+ + M++ G P Y +I N
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTII--NGLCKM 54
Query: 71 G-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
G E AL +L +M E + A V Y +I L A + +M DKGI PD +
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHI--HAQNLFTEMHDKGIFPDVI 112
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
TY +ID+ C GR ++A L R+M+ R +PD T+ L+N +G+ S+A ++ +
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQ-INPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M+ +G P + +TYN++I G+C R+ +A + M SPD V++ +I
Sbjct: 172 MLRRGIFP--------TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLE 309
+G CK + E+ EM ++ +++ TY++LI+ + GDL+
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGI---------------VANTVTYTTLIHGFCQVGDLD 268
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
A L VM G + +T +L L
Sbjct: 269 AAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 12/267 (4%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +L +M + H Y +I C++ A +F EM D+G P + TY+ +I
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ +G + A ++LR+M ER + D V++ +I AL+ E K+ +A E+ DM +G
Sbjct: 120 SFCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALV--KEGKVSEAEEIYGDMLRRG 176
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I P ++TY +ID C RL++A + M + SPD T+ L+N YC
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS-CSPDVVTFSTLINGYCKAKRVDNG 235
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ EM +G + + VTY LI+G+C +G + A ++ M G++P+ +
Sbjct: 236 MEIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDK 270
+++ +++ LC +E KA+ + ++ K
Sbjct: 288 TFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
T+AE++L +M + + P T++ LI++ +E + S+A +++ +M+ RG P+ TYN++
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I +C +++L A M M
Sbjct: 188 ID-----------------------------GFC---------KQDRLNDAKRMLDSMAS 209
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
K PD VT+ LI+ C R+ ++F EM HR G + TY L++ +C G+
Sbjct: 210 KSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM-HRRGIVANTVTYTTLIHGFCQVGDLD 268
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
A L + M+ G P++ +T+ +++ CS +++A I + +
Sbjct: 269 AAQDLLNVMISSGVAPNY--------ITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 43/338 (12%)
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M + G PD VT+ L++ LC GR+ +A L M+ G Y ++N C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG-----HQPYGTIINGLCKMG 55
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ A +L +M T +V YNA+I C G A +F M + G+
Sbjct: 56 DTESALNLLSKMEE--------THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
PD ++Y +I C+ A +L +M +++ +N D T+S+L
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ----INPDVV-----------TFSAL 152
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC 358
IN + +G + +A ++ M G +T + +++G K R +AK L C
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC 212
Query: 359 FGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
P + + TLI C + KR + +++ + H + N Y LI
Sbjct: 213 --SPDVVTFSTLINGYC---KAKR-----VDNGMEIFCEMHRRGIVANT----VTYTTLI 258
Query: 418 FDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
+ ++ A ++ M+ G P+ + +++ +L
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EAEE+ +M +G+ P TY +I FC++ R + A ++ M + SP + T++
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I A ++ +EI EM RG+ A+ V+Y +I + L A ++ M
Sbjct: 222 LINGYCKAKR-VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD--LDAAQDLLNVMI 278
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGG 159
G+ P+ +T++ ++ +LC L +AF + ++ G
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 197/468 (42%), Gaps = 36/468 (7%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P TY LI+ C+E + AV E +G P+ +Y +IQ ++A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC-KSKEYDIASK 401
Query: 78 ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
+L +M ERG D V+Y +I L++ + A MK + D+G+ PD+ Y +L+
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGH--MDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
LC GR A LF EML R PD + Y L++ + G+F +A + V KG
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRN-ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
D +V +NA+I G+C G + EAL M E L PD +Y +I G K ++
Sbjct: 519 D--------VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 258 PVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYV 317
A ++ M+K + ++ TY+SLIN + QGD + A +
Sbjct: 571 MATAIKIFRYMEKNKCKPNVV---------------TYTSLINGFCCQGDFKMAEETFKE 615
Query: 318 MGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSN 376
M + + VT + L+ L K + T E Y W + +P + ++ L++
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVY-YWELMMTNKCVPNEVTFNCLLQGFVKK 674
Query: 377 NEFKRLVGPAITFSVKVAIKAH--HTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYM 434
K L P + + ++ + H M + YN + V A
Sbjct: 675 TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQD 734
Query: 435 EMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSEL 482
+MV GF P S A++ G N W + CNL + L
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVG--NSKQW---RNMDFCNLGEKGL 777
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 192/465 (41%), Gaps = 66/465 (14%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
+++E + KG P+ Y +I +C+ A VF+E+ +GF P+L+T+ +I
Sbjct: 224 GRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI- 282
Query: 64 TNAFAGTGIEVALE-ILREMPERGLTADAVSYCHVICALL-----LPPEEKLGKAFEMKK 117
N F G VA + +L E+ ERGL ++I A + P E +G + +
Sbjct: 283 -NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG--WIIAN 339
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
D PD TY +LI+ LC G+ A E + G P+ +Y L+ YC
Sbjct: 340 DCK-----PDVATYNILINRLCKEGKKEVAVGFLDEA-SKKGLIPNNLSYAPLIQAYCKS 393
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
E+ A L +M +G PD +VTY LI+G G + +A+ + + + G
Sbjct: 394 KEYDIASKLLLQMAERGCKPD--------IVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSS 297
+SPD Y ++SGLCK + A L EM L+ + L D Y++
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM--------LDRNI-------LPDAYVYAT 490
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFR 357
LI+ ++ GD ++A ++ + G D V + ++ G + EA
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA---------LA 541
Query: 358 CFG-------MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDG 410
C +P Y T+I+ G + AIK M KP+
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIID-----------GYVKQQDMATAIKIFRYMEKNKCKPNV 590
Query: 411 TVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
Y LI + A + EM VP++ + LI++L
Sbjct: 591 VTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 215/516 (41%), Gaps = 81/516 (15%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
E E+VL + ++ + + ++H++ + SKAV+++ +++ D+ V
Sbjct: 116 NEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVEL-----YDSVPDV 170
Query: 62 IQTNAFAGTGIEV-----ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
I N+ ++ A ++ EM +RG + D S C ++ + + ++G+ ++
Sbjct: 171 IACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR--KLI 228
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
+ KG +P+ V Y +I C +G + A+ +F+E L GF P T+ ++N +C
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE-LKLKGFMPTLETFGTMINGFCK 287
Query: 177 QGEFSKAFHLHHEMVHKG------FLPDFVTG---------------------FSPSLVT 209
+G+F + L E+ +G FL + + P + T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
YN LI C G+ + A+ + GL P+ +SY +I CK +E A +L L+M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM- 406
Query: 270 KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
+R C D TY LI+ + G ++ A + + G D
Sbjct: 407 AERGC--------------KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 330 LSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSN----NEFKRLVGP 385
++L++GL K R AK LL++ +P +Y TLI+ +E +++
Sbjct: 453 YNMLMSGLCKTGRFLPAK--LLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 386 AITFSVKVAIKAHHTMLHGNYK--------------------PDGTVYNLLIFDHSRSLE 425
++ VKV + H+ M+ G + PD Y+ +I + + +
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 426 VHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRY 461
+ A ++ M P++ + +LI G +
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 27/264 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + M + L P + TY+ +I + ++ + A+K+FR M P++ TY +
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N F G ++A E +EM R L + V+Y +I + L L KA + M
Sbjct: 596 LI--NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS-LAKESSTLEKAVYYWELM 652
Query: 120 DDKGILPDSVTYEVLIDNLC--WVGRLSEAFD--------LFREMLHR---GGFSPDEHT 166
+P+ VT+ L+ G++ D LF E HR G+S
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA 226
Y + + C C+ G A +MV K GFSP V++ A+++G+C +G ++
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKK--------GFSPDPVSFAAILHGFCVVGNSKQW 764
Query: 227 LEI-FRGMPEMGLSPDTVSYRQVI 249
+ F + E GL V Y QV+
Sbjct: 765 RNMDFCNLGEKGLEV-AVRYSQVL 787
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A + ++ +G++P Y L+ C+ R A +F EM+DR P Y
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I + F +G + A ++ E+G+ D V + +I L +A M
Sbjct: 491 LI--DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC--RSGMLDEALACMNRM 546
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+++ ++PD TY +ID ++ A +FR M + P+ TY +L+N +C QG+
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM-EKNKCKPNVVTYTSLINGFCCQGD 605
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F A EM L D V P++VTY LI SL + LE E+ ++
Sbjct: 606 FKMAEETFKEMQ----LRDLV----PNVVTYTTLIR---SLAKESSTLEKAVYYWELMMT 654
Query: 240 ----PDTVSYRQVISGLCK 254
P+ V++ ++ G K
Sbjct: 655 NKCVPNEVTFNCLLQGFVK 673
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 115/295 (38%), Gaps = 48/295 (16%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A+ + EM + + P Y LI F + +A KVF +++G + +NA+I+
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
F +G ++ AL + M E L D +Y +I + ++ + A ++ + M+
Sbjct: 529 --GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV--KQQDMATAIKIFRYMEKN 584
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE-FS 181
P+ VTY LI+ C G A + F+EM R P+ TY L+ +
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD-LVPNVVTYTTLIRSLAKESSTLE 643
Query: 182 KAFHLHHEMVHKGFLPDFVT---------------------------------------- 201
KA + M+ +P+ VT
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 202 -GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI 255
G+S YN+ + C G V+ A M + G SPD VS+ ++ G C +
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 177/371 (47%), Gaps = 31/371 (8%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
A L +M G P T+T L++ +C +R A+ +F +++ GF P++ TY +I
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ + A+E+ +M G + V+Y ++ L + G A + +DM +
Sbjct: 196 RCLC-KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC--EIGRWGDAAWLLRDMMKR 252
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
I P+ +T+ LID VG+L EA +L+ M+ + PD TY +L+N C+ G +
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLINGLCMYGLLDE 311
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A + + M G P+ V Y LI+G+C RV++ ++IF M + G+ +T
Sbjct: 312 ARQMFYLMERNGCYPN--------EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
++Y +I G C + P A E+ +M +R+ D TY+ L++
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA---------------PPDIRTYNVLLDGL 408
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM- 361
G +EKA + M + VT ++++ G+ K+ + +A + L ++F + GM
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA-FDLFCSLFSK--GMK 465
Query: 362 PAYIIYDTLIE 372
P I Y T+I
Sbjct: 466 PNVITYTTMIS 476
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 160/344 (46%), Gaps = 32/344 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A + +++ G P+ TYT LI C+ + AV++F +M G P++ TYNA++
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
G + A +LR+M +R + + +++ +I A + KL +A E+ M
Sbjct: 231 TGLCEIGRWGDAAW-LLRDMMKRRIEPNVITFTALIDAFV--KVGKLMEAKELYNVMIQM 287
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
+ PD TY LI+ LC G L EA +F ++ R G P+E Y L++ +C
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ +EM KG + + +TY LI GYC +GR A E+F M PD
Sbjct: 347 GMKIFYEMSQKGVVAN--------TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 243 VSYRQVISGLC---KIREPVKAYEL--KLEMD----------KKRSCLSLNEDTYETLME 287
+Y ++ GLC K+ + + +E K EMD + L ED ++
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 288 QLS-----DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
S + TY+++I+ + +G + +A L M DG+L +
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA ++ M G P+E YT LIH FC+ R +K+F EM +G + TY
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+IQ G +VA E+ +M R D +Y ++ L K+ KA + + M
Sbjct: 369 LIQGYCLVGRP-DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC--NGKVEKALMIFEYMR 425
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ + + VTY ++I +C +G++ +AFDLF + + G P+ TY +++ +C +G
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLI 484
Query: 181 SKAFHLHHEMVHKGFLPD 198
+A L +M GFLP+
Sbjct: 485 HEADSLFKKMKEDGFLPN 502
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 31/271 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A +L +M + + P+ T+T LI +F + + +A +++ MI P + TY ++I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
G ++ A ++ M G + V Y +I +++ ++ +M K
Sbjct: 301 NGLCMYGL-LDEARQMFYLMERNGCYPNEVIYTTLIHGFC--KSKRVEDGMKIFYEMSQK 357
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G++ +++TY VLI C VGR A ++F +M R PD TY L++ C G+ K
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEK 416
Query: 183 AFHLHHEMVHKG---------------------------FLPDFVTGFSPSLVTYNALIY 215
A + M + F F G P+++TY +I
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
G+C G + EA +F+ M E G P+ Y+
Sbjct: 477 GFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 137/348 (39%), Gaps = 44/348 (12%)
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
LP + + L+ + + R LF +M G P T +M+C CL + +A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNIVMHCVCLSSQPCRAS 138
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
+M+ GF PD LVT+ +L+ GYC R+++A+ +F + MG P+ V+
Sbjct: 139 CFLGKMMKLGFEPD--------LVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVT 190
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
Y +I LCK R A EL +M S + TY++L+
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGS---------------RPNVVTYNALVTGLCE 235
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
G A L M + +T + L++ K+ + EAK L+ V + P
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE--LYNVMIQMSVYPDV 293
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
Y +LI G + + A + + M P+ +Y LI +S
Sbjct: 294 FTYGSLIN-----------GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR-------YNEMS 465
V ++ EM G V + + LI+ GR +N+MS
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 31/364 (8%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
E+ G + + L++ FC+E S A KVF E+ R P++ ++N +I N +
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI--NGYCK 287
Query: 70 TG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G ++ + +M + D +Y +I AL E K+ A + +M +G++P+
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC--KENKMDGAHGLFDEMCKRGLIPND 345
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
V + LI G + + +++ML + G PD Y L+N +C G+ A ++
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
M+ +G PD +TY LI G+C G V+ ALEI + M + G+ D V + +
Sbjct: 405 GMIRRGLRPD--------KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
+ G+CK + A EM R+ + D+ TY+ +++ + +GD
Sbjct: 457 VCGMCKEGRVIDAERALREM--LRAGIK-------------PDDVTYTMMMDAFCKKGDA 501
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYD 368
+ ++L M DG++ VT +VLLNGL K+ + A +L +P I Y+
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD--MLLDAMLNIGVVPDDITYN 559
Query: 369 TLIE 372
TL+E
Sbjct: 560 TLLE 563
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 14/269 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A + +EM +GL P++ +T LIH + + +++M+ +G P + YN
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ N F G + A I+ M RGL D ++Y +I + + A E++K+M
Sbjct: 386 LV--NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD--VETALEIRKEM 441
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D GI D V + L+ +C GR+ +A REML R G PD+ TY +M+ +C +G+
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREML-RAGIKPDDVTYTMMMDAFCKKGD 500
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F L EM G +P S+VTYN L+ G C LG+++ A + M +G+
Sbjct: 501 AQTGFKLLKEMQSDGHVP--------SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEM 268
PD ++Y ++ G + K Y K E+
Sbjct: 553 PDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 29/346 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A++V +E+ + L P ++ LI+ +C+ + ++ +M P + TY+A
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 61 VIQTNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I NA ++ A + EM +RGL + V + +I E L K E + M
Sbjct: 316 LI--NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK--ESYQKM 371
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
KG+ PD V Y L++ C G L A ++ M+ R G PD+ TY L++ +C G+
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR-GLRPDKITYTTLIDGFCRGGD 430
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A + EM G D V GFS AL+ G C GRV +A R M G+
Sbjct: 431 VETALEIRKEMDQNGIELDRV-GFS-------ALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
PD V+Y ++ CK + ++L EM S+ TY+ L+
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV---------------TYNVLL 527
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
N G ++ A L M + G + D++T + LL G ++ A +++
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 127/314 (40%), Gaps = 36/314 (11%)
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
GF ++ +N L+ +C G + +A ++F + + L P VS+ +I+G CK+ +
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 261 AYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
+ LK +M+K R+ D + TYS+LIN + ++ A+ L M
Sbjct: 294 GFRLKHQMEKSRT----RPDVF-----------TYSALINALCKENKMDGAHGLFDEMCK 338
Query: 321 DGYLSDNVTLSVLLNGLNK---IARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSN 376
G + ++V + L++G ++ I E+ +L P ++Y+TL+ C N
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL-----QPDIVLYNTLVNGFCKN 393
Query: 377 NEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEM 436
+ + A M+ +PD Y LI R +V A + EM
Sbjct: 394 GD------------LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 437 VHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEM 496
G AL+ + +GR + + LR+ D ++ + K +
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 497 TALLDVLSEIAMDG 510
+L E+ DG
Sbjct: 502 QTGFKLLKEMQSDG 515
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +AE L EM G+ P + TYT ++ +FC++ A K+ +EM G PS+ TYN
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ N G ++ A +L M G+ D ++Y LL + + +
Sbjct: 526 LL--NGLCKLGQMKNADMLLDAMLNIGVVPDDITY-----NTLLEGHHRHANSSKRYIQK 578
Query: 120 DDKGILPDSVTYEVLIDNL 138
+ GI+ D +Y+ +++ L
Sbjct: 579 PEIGIVADLASYKSIVNEL 597
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 153/304 (50%), Gaps = 19/304 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A + +E++ GL P YT +I +C R KA + F ++ G PSL T
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G+ I A + R M GL D V+Y +++ +L K FE+ +M
Sbjct: 449 LIGACSRFGS-ISDAESVFRNMKTEGLKLDVVTYNNLMHGY--GKTHQLNKVFELIDEMR 505
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
GI PD TY +LI ++ G + EA ++ E++ RG F P + +++ + +G+F
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG-FVPSTLAFTDVIGGFSKRGDF 564
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+AF L M PD +VT +AL++GYC R+++A+ +F + + GL P
Sbjct: 565 QEAFILWFYMADLRMKPD--------VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM-----EQLSDEDTY 295
D V Y +I G C + + KA EL + + +R L NE T+ L+ ++ + +T+
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACEL-IGLMVQRGMLP-NESTHHALVLGLEGKRFVNSETH 674
Query: 296 SSLI 299
+S++
Sbjct: 675 ASML 678
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 188/454 (41%), Gaps = 47/454 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E +E M +G + + I +C + K ++ M G P + + I
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
AG ++ A +L ++ G++ D+VS VI K+GK E K +
Sbjct: 315 KLCKAGF-LKEATSVLFKLKLFGISQDSVSVSSVIDGFC-----KVGKPEEAIKLIHSFR 368
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P+ Y + N+C G + A +F+E+ G PD Y +++ YC G KA
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG-LLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCS-LGRVQEALEIFRGMPEMGLSPDT 242
F ++ +G PSL T LI G CS G + +A +FR M GL D
Sbjct: 428 FQYFGALLK--------SGNPPSLTTSTILI-GACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
V+Y ++ G K + K +EL EM + + +S D TY+ LI+
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEM--RSAGIS-------------PDVATYNILIHSM 523
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
+ +G +++A ++ + G++ + + ++ G +K EA ++LW P
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA--FILWFYMADLRMKP 581
Query: 363 AYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS 421
+ L+ C ++ AI + +L KPD +YN LI +
Sbjct: 582 DVVTCSALLHGYCKAQRMEK------------AIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 422 RSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
++ KA + MV G +P+ + AL+ L
Sbjct: 630 SVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 147/382 (38%), Gaps = 53/382 (13%)
Query: 106 EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
E K+ A ++ +D GI P L+ + V L A + ML RG +
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGR-HLNAA 272
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
+ YC G F K + L M H G PD +V + I C G ++E
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKE 324
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
A + + G+S D+VS VI G CK+ +P +A +L L + +
Sbjct: 325 ATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI-------HSFRLRPNIF--- 374
Query: 286 MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
YSS +++ + GD+ +A + + G L D V + +++G + RT +
Sbjct: 375 --------VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 346 AKWYLLWTVFFRCFGMPAYIIYDTLIENCSN----NEFKRLVGPAITFSVKVAIKAHHTM 401
A Y + + P+ LI CS ++ + + T +K+ + ++ +
Sbjct: 427 AFQY--FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 402 LHGNYK--------------------PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
+HG K PD YN+LI + +A + E++ GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 442 VPHMFSVLALIKALHYDGRYNE 463
VP + +I G + E
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQE 566
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 153/304 (50%), Gaps = 19/304 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A + +E++ GL P YT +I +C R KA + F ++ G PSL T
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTI 448
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G+ I A + R M GL D V+Y +++ +L K FE+ +M
Sbjct: 449 LIGACSRFGS-ISDAESVFRNMKTEGLKLDVVTYNNLMHGY--GKTHQLNKVFELIDEMR 505
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
GI PD TY +LI ++ G + EA ++ E++ RG F P + +++ + +G+F
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG-FVPSTLAFTDVIGGFSKRGDF 564
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+AF L M PD +VT +AL++GYC R+++A+ +F + + GL P
Sbjct: 565 QEAFILWFYMADLRMKPD--------VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM-----EQLSDEDTY 295
D V Y +I G C + + KA EL + + +R L NE T+ L+ ++ + +T+
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACEL-IGLMVQRGMLP-NESTHHALVLGLEGKRFVNSETH 674
Query: 296 SSLI 299
+S++
Sbjct: 675 ASML 678
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 188/454 (41%), Gaps = 47/454 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E +E M +G + + I +C + K ++ M G P + + I
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
AG ++ A +L ++ G++ D+VS VI K+GK E K +
Sbjct: 315 KLCKAGF-LKEATSVLFKLKLFGISQDSVSVSSVIDGFC-----KVGKPEEAIKLIHSFR 368
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P+ Y + N+C G + A +F+E+ G PD Y +++ YC G KA
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG-LLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCS-LGRVQEALEIFRGMPEMGLSPDT 242
F ++ +G PSL T LI G CS G + +A +FR M GL D
Sbjct: 428 FQYFGALLK--------SGNPPSLTTSTILI-GACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
V+Y ++ G K + K +EL EM + + +S D TY+ LI+
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEM--RSAGIS-------------PDVATYNILIHSM 523
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
+ +G +++A ++ + G++ + + ++ G +K EA ++LW P
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA--FILWFYMADLRMKP 581
Query: 363 AYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS 421
+ L+ C ++ AI + +L KPD +YN LI +
Sbjct: 582 DVVTCSALLHGYCKAQRMEK------------AIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Query: 422 RSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
++ KA + MV G +P+ + AL+ L
Sbjct: 630 SVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 147/382 (38%), Gaps = 53/382 (13%)
Query: 106 EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
E K+ A ++ +D GI P L+ + V L A + ML RG +
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGR-HLNAA 272
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
+ YC G F K + L M H G PD +V + I C G ++E
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKE 324
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
A + + G+S D+VS VI G CK+ +P +A +L L + +
Sbjct: 325 ATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI-------HSFRLRPNIF--- 374
Query: 286 MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
YSS +++ + GD+ +A + + G L D V + +++G + RT +
Sbjct: 375 --------VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 346 AKWYLLWTVFFRCFGMPAYIIYDTLIENCSN----NEFKRLVGPAITFSVKVAIKAHHTM 401
A Y + + P+ LI CS ++ + + T +K+ + ++ +
Sbjct: 427 AFQY--FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 402 LHGNYK--------------------PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
+HG K PD YN+LI + +A + E++ GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 442 VPHMFSVLALIKALHYDGRYNE 463
VP + +I G + E
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQE 566
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 214/489 (43%), Gaps = 75/489 (15%)
Query: 4 AEEVLEEMYHK---GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
AE +E Y G P + Y ++ + E+R V+R+M GF P++ TYN
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL------------------ 102
+++ ++ A ++L EM +G DAVSY VI ++
Sbjct: 187 LLKA-LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV 245
Query: 103 ----------LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR 152
L E AFE+ ++M +KGI P+ ++Y LI+ LC G++ AF
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
+ML R G P+ +T +L+ L+G A L ++M+ +GF G P++V YN
Sbjct: 306 QMLKR-GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGF------GLQPNVVAYNT 357
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
L+ G+CS G + +A+ +F M E+G SP+ +Y +I+G K A + +M
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 273 SCLSLNEDT--------------YETLMEQLSDED------TYSSLINDYLAQGDLEKAY 312
C ++ T E+L+E +S E+ T+++ I G L+ A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 313 QLDYVMGHDGYLSDN-VTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLI 371
++ M N VT + LL+GL K R EA + L +F R + Y+TL+
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA-YGLTREIFMRGVEWSSS-TYNTLL 535
Query: 372 ENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYN 431
N P I A++ M+ PD N++I + + + +A
Sbjct: 536 HGSCNAGL-----PGI------ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Query: 432 MYMEMVHYG 440
M +++V G
Sbjct: 585 M-LDLVSCG 592
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 114/270 (42%), Gaps = 34/270 (12%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IE 73
GL P+ Y L+ FC KAV VF M + G SP++ TY ++I N FA G ++
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI--NGFAKRGSLD 404
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
A+ I +M G + V Y +++ AL K +A + + M + P T+
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALC--RHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
I LC GRL A +FR+M + P+ TY L++ +A+ L E+ +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 194 GF------------------LPDF---------VTGFSPSLVTYNALIYGYCSLGRVQEA 226
G LP V G SP +T N +I YC G+ + A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 227 LEIFR--GMPEMGLSPDTVSYRQVISGLCK 254
++ PD +SY VI GLC+
Sbjct: 583 AQMLDLVSCGRRKWRPDVISYTNVIWGLCR 612
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 161/382 (42%), Gaps = 43/382 (11%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
T+ +I + + + ++M +GF S D + +VI G E A+E+
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLA-ERAVEMFYR 136
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
+ E G Y HV+ LL E ++ + + +DM G P+ TY VL+ LC
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLL--GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
++ A L EM ++G PD +Y +++ C G +V +G +
Sbjct: 195 NKVDGAKKLLVEMSNKG-CCPDAVSYTTVISSMCEVG-----------LVKEG--RELAE 240
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
F P + YNALI G C + A E+ R M E G+SP+ +SY +I+ LC + A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 262 YELKLEMDKK-------------RSCLSLNEDTYET--LMEQL-------SDEDTYSSLI 299
+ +M K+ + C L T++ L Q+ + Y++L+
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCF-LRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+ + G++ KA + M G + T L+NG K A + +W
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY--IWNKMLTSG 417
Query: 360 GMPAYIIYDTLIEN-CSNNEFK 380
P ++Y ++E C +++FK
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFK 439
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 15/206 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR-GFSPSLDTYNAV 61
EAE ++E M + P T+ I C R A KVFR+M + P++ TYN +
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMKKD 118
+ A A IE A + RE+ RG+ + +Y H C LP G A ++
Sbjct: 500 LDGLAKANR-IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP-----GIALQLVGK 553
Query: 119 MDDKGILPDSVTYEVLIDNLCWVG---RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYC 175
M G PD +T ++I C G R ++ DL R + PD +Y N++ C
Sbjct: 554 MMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS--CGRRKWRPDVISYTNVIWGLC 611
Query: 176 LQGEFSKAFHLHHEMVHKGFLPDFVT 201
L M+ G +P T
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIAT 637
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 139/268 (51%), Gaps = 18/268 (6%)
Query: 23 YTC--LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA-GTGIEVALEIL 79
YTC L++ FCQ S+ A +M+ GF P + T+ ++I N F G +E A+ ++
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI--NGFCLGNRMEEAMSMV 165
Query: 80 REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLC 139
+M E G+ D V Y +I +L + A + M++ GI PD V Y L++ LC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLC--KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
GR +A L R M R PD T+ L++ + +G+F A L++EM+
Sbjct: 224 NSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR------- 275
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
+P++ TY +LI G+C G V EA ++F M G PD V+Y +I+G CK ++
Sbjct: 276 -MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLME 287
A ++ EM +K L+ N TY TL++
Sbjct: 335 DAMKIFYEMSQKG--LTGNTITYTTLIQ 360
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 35/331 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A L +M G P T+T LI+ FC +R +A+ + +M++ G P + Y +I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ G + AL + +M G+ D V Y ++ L + A + + M +
Sbjct: 186 SLCKNGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLC--NSGRWRDADSLLRGMTKRK 242
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I PD +T+ LID G+ +A +L+ EM+ R +P+ TY +L+N +C++G +A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ + M KG PD +V Y +LI G+C +V +A++IF M + GL+ +T+
Sbjct: 302 RQMFYLMETKGCFPD--------VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKK------RS------CLSLNEDTYETLM--EQL 289
+Y +I G ++ +P A E+ M + R+ CL N + LM E +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 290 SDED---------TYSSLINDYLAQGDLEKA 311
+ TY+ L++ G LEKA
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 147/291 (50%), Gaps = 13/291 (4%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A+ +L M + + P T+ LI +F +E + A +++ EMI +P++ TY ++I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
N F G ++ A ++ M +G D V+Y +I +K+ A ++ +M
Sbjct: 290 --NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC--KCKKVDDAMKIFYEMSQ 345
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
KG+ +++TY LI VG+ + A ++F M+ RG P+ TY L++C C G+
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVK 404
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
KA + +M + + G +P++ TYN L++G C G++++AL +F M + +
Sbjct: 405 KALMIFEDMQKRE-----MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDE 292
++Y +I G+CK + A L + K + N TY T++ L E
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKG--VKPNVVTYTTMISGLFRE 508
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 199/494 (40%), Gaps = 66/494 (13%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA ++ M P +T L++ + + + + + G S L T N +
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 62 IQTNAFAGTGIE-VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ N F + +A L +M + G D V++ +I L ++ +A M M
Sbjct: 114 M--NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG--NRMEEAMSMVNQMV 169
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ GI PD V Y +ID+LC G ++ A LF +M G PD Y +L+N C G +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A L M + PD ++T+NALI + G+ +A E++ M M ++P
Sbjct: 229 RDADSLLRGMTKRKIKPD--------VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ +Y +I+G C ++ +D+ R L E D Y+SLIN
Sbjct: 281 NIFTYTSLINGFC----------MEGCVDEARQMFYLMETK-----GCFPDVVAYTSLIN 325
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
+ ++ A ++ Y M G + +T + L+ G ++ + A+ V G
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV---SRG 382
Query: 361 MPAYI-IYDTLIEN-CSNNEFKRLVGPAITF---------SVKVAIKAHHTMLHGNYKPD 409
+P I Y+ L+ C N + K+ + + F V I ++ +LHG
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKAL---MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 410 GTVYNLLIFDHSRSLE--------------------VHKAYNMYMEMVHYGFVPHMFSVL 449
L++F+ R E V A N++ + G P++ +
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 450 ALIKALHYDGRYNE 463
+I L +G +E
Sbjct: 500 TMISGLFREGLKHE 513
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 128/270 (47%), Gaps = 40/270 (14%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+AEE+ EM + P+ TYT LI+ FC E +A ++F M +G P + Y ++I
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 63 QTNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKD 118
N F ++ A++I EM ++GLT + ++Y +I ++GK A E+
Sbjct: 325 --NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF-----GQVGKPNVAQEVFSH 377
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR--GGFSPDEHTYFNLMNCYCL 176
M +G+ P+ TY VL+ LC+ G++ +A +F +M R G +P+ TY L++ C
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 177 QGEFSKAFHLHHEMVHK-------------------GFLPDFVT--------GFSPSLVT 209
G+ KA + +M + G + + V G P++VT
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
Y +I G G EA +FR M E G+S
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 168/416 (40%), Gaps = 90/416 (21%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
+ +A ++ M + LP + + L++ + + + +L + L G S D +T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLC-DHLQIMGVSHDLYTC 110
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
LMNC+C + A +M+ GF PD +VT+ +LI G+C R++EA+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPD--------IVTFTSLINGFCLGNRMEEAM 162
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCK------------------IREPVKAY------- 262
+ M EMG+ PD V Y +I LCK IR V Y
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 263 ----------ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY----------------- 295
L M K++ + + T+ L++ E +
Sbjct: 223 CNSGRWRDADSLLRGMTKRK--IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 296 -----SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
+SLIN + +G +++A Q+ Y+M G D V + L+NG K + +A
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA---- 336
Query: 351 LWTVFFRCF--GMPA-YIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYK 407
+F+ G+ I Y TLI+ F ++ P VA + M+
Sbjct: 337 -MKIFYEMSQKGLTGNTITYTTLIQG-----FGQVGKP------NVAQEVFSHMVSRGVP 384
Query: 408 PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHY---GFVPHMFSVLALIKALHYDGR 460
P+ YN+L+ + +V KA ++ +M G P++++ L+ L Y+G+
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 170/374 (45%), Gaps = 35/374 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A L +M G P T+ L++ FC+ R A+ +F +M+ G+ P++ YN
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I ++ AL++L M + G+ D V+Y +I L + A M M
Sbjct: 192 IID-GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC--SSGRWSDATRMVSCMT 248
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I PD T+ LID GR+SEA + + EM+ R PD TY L+ C+
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRL 307
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + MV KG PD +VTY+ LI GYC +V+ +++F M + G+
Sbjct: 308 DEAEEMFGFMVSKGCFPD--------VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+TV+Y +I G C+ + A E+ M + N TY L+ L D
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRM--VFCGVHPNIITYNVLLHGLCD--------- 408
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF--FRC 358
G +EKA + M +G +D VT ++++ G+ K +A W ++ C
Sbjct: 409 ----NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA-----WDIYCSLNC 459
Query: 359 FG-MPAYIIYDTLI 371
G MP Y T++
Sbjct: 460 QGLMPDIWTYTTMM 473
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 126/296 (42%), Gaps = 33/296 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
A ++L M G+ P TY LI C R S A ++ M R P + T+NA+I
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
G + A E EM R L D V+Y +I L + +L +A EM M K
Sbjct: 264 DACVKEGR-VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM--YSRLDEAEEMFGFMVSK 320
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD VTY +LI+ C ++ LF EM RG + TY L+ YC G+ +
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG-VVRNTVTYTILIQGYCRAGKLNV 379
Query: 183 AFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIY 215
A + MV G P+ +T G +VTYN +I
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK--IREPVKAYELKLEMD 269
G C G V +A +I+ + GL PD +Y ++ GL K +R A K++ D
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 124/242 (51%), Gaps = 14/242 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EAEE EEM + L P TY+ LI+ C SR +A ++F M+ +G P + TY+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 61 VIQTNAFAGT-GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N + + +E +++ EM +RG+ + V+Y +I KL A E+ + M
Sbjct: 332 LI--NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC--RAGKLNVAEEIFRRM 387
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G+ P+ +TY VL+ LC G++ +A + +M + G D TY ++ C GE
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGE 446
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+ A+ ++ + +G +PD + TY ++ G G +EA +FR M E G+
Sbjct: 447 VADAWDIYCSLNCQGLMPD--------IWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 240 PD 241
P+
Sbjct: 499 PN 500
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 134/313 (42%), Gaps = 45/313 (14%)
Query: 170 LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
L+NC+C + S A +M+ G PS+VT+ +L+ G+C RV +AL +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIK--------LGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 230 FRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
F M MG P+ V Y +I GLCK ++ A +L M+K + + TY +L+ L
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG--IGPDVVTYNSLISGL 231
Query: 290 S----------------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDN 327
D T+++LI+ + +G + +A + M D
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 328 VTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAI 387
VT S+L+ GL +R EA+ + V CF P + Y LI G
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--PDVVTYSILIN-----------GYCK 338
Query: 388 TFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFS 447
+ V+ +K M + Y +LI + R+ +++ A ++ MV G P++ +
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 448 VLALIKALHYDGR 460
L+ L +G+
Sbjct: 399 YNVLLHGLCDNGK 411
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 131/340 (38%), Gaps = 42/340 (12%)
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTG 202
+L ++ DLF M+ P + L++ ++ +L +M + G
Sbjct: 61 KLDDSLDLFFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQ--------MLG 111
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC---KIREPV 259
+L T N L+ +C ++ AL M ++G P V++ +++G C ++ + +
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 260 KAYELKLEMDKKRS-----------CLSLNEDTYETLMEQLS------DEDTYSSLINDY 302
++ + M K + C S D L+ ++ D TY+SLI+
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
+ G A ++ M D T + L++ K R +EA+ + + R P
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF--YEEMIRRSLDP 289
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
+ Y LI G + + A + M+ PD Y++LI + +
Sbjct: 290 DIVTYSLLI-----------YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYN 462
S +V ++ EM G V + + LI+ G+ N
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 29/371 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A L +M G P T+ L++ FC +R +A+ + +++ G+ P++ YN
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + G + AL++L+ M + G+ D V+Y +I L G + + DM
Sbjct: 190 IIDSLCEKGQ-VNTALDVLKHMKKMGIRPDVVTYNSLITRLF--HSGTWGVSARILSDMM 246
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
GI PD +T+ LID G+L EA + EM+ R +P+ TY +L+N C+ G
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS-VNPNIVTYNSLINGLCIHGLL 305
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + + +V KGF P+ VTYN LI GYC RV + ++I M G+
Sbjct: 306 DEAKKVLNVLVSKGFFPN--------AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
DT +Y + G C+ + A ++ + + SC ++ D Y T++ L++
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKV---LGRMVSC-GVHPDMY-----------TFNILLD 402
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
G + KA + + +T ++++ GL K A E WYL ++ +
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK-ADKVEDAWYLFCSLALKGVS 461
Query: 361 MPAYIIYDTLI 371
P I Y T++
Sbjct: 462 -PDVITYITMM 471
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 152/340 (44%), Gaps = 33/340 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +++++ G P+ Y +I S C++ + + A+ V + M G P + TYN++I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DM 119
T F V+ IL +M G++ D +++ + L+ K G+ E KK +M
Sbjct: 227 -TRLFHSGTWGVSARILSDMMRMGISPDVITF-----SALIDVYGKEGQLLEAKKQYNEM 280
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ + P+ VTY LI+ LC G L EA + ++ + GF P+ TY L+N YC
Sbjct: 281 IQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK-GFFPNAVTYNTLINGYCKAKR 339
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+ M G D TYN L GYC G+ A ++ M G+
Sbjct: 340 VDDGMKILCVMSRDGVDGD--------TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
PD ++ ++ GLC + KA ++LE D ++S + TY +++ L D
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKAL-VRLE-DLQKSKTVVGIITYNIIIKGLCKAD------ 443
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+E A+ L + G D +T ++ GL +
Sbjct: 444 -------KVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 31/298 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A +VL+ M G+ P TY LI + ++ +M+ G SP + T++A
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I G +E A + EM +R + + V+Y +I L + L +A ++ +
Sbjct: 260 LIDVYGKEGQLLE-AKKQYNEMIQRSVNPNIVTYNSLINGLCI--HGLLDEAKKVLNVLV 316
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG P++VTY LI+ C R+ + + M R G D TY L YC G+F
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM-SRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 181 SKAFHLHHEMVHKGFLPDFVT------GFSP---------------------SLVTYNAL 213
S A + MV G PD T G ++TYN +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
I G C +V++A +F + G+SPD ++Y ++ GL + R +A+EL +M K+
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 59/387 (15%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI D ++ LID C RLS A +M+ + GF P T+ +L+N +C F +
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMM-KLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L ++V G+ P++V YN +I C G+V AL++ + M +MG+ PD
Sbjct: 168 AMSLVDQIVG--------LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDV 219
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--------- 293
V+Y +I+ L ++ D R +S + T+ L++ E
Sbjct: 220 VTYNSLITRL--FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 294 -------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
TY+SLIN G L++A ++ V+ G+ + VT + L+NG K
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 341 ARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEF---KRLVGPAITFSVKVAIK 396
R + L V R Y+TL + C +F ++++G ++ V +
Sbjct: 338 KRVDDGMKIL--CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Query: 397 AHHTMLHG---------------NYKPDGTV-----YNLLIFDHSRSLEVHKAYNMYMEM 436
+ +L G + + TV YN++I ++ +V A+ ++ +
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSL 455
Query: 437 VHYGFVPHMFSVLALIKALHYDGRYNE 463
G P + + + ++ L + E
Sbjct: 456 ALKGVSPDVITYITMMIGLRRKRLWRE 482
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 142/308 (46%), Gaps = 47/308 (15%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA V E M KG+ P Y LI + +K + E+ RG +P++ TY A
Sbjct: 557 LKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGA 616
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICA-------------------- 100
+I G I+ A EM E+G+T + V+ C I
Sbjct: 617 LITGWCNIGM-IDKAYATCFEMIEKGITLN-VNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 101 --LLLPPEEKLGKAFE---------------MKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
LLLP + L + E ++ K ++P+++ Y V I LC G+
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
L +A LF ++L F PDE+TY L++ + G+ +KAF L EM KG +P+
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN----- 789
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
+VTYNALI G C LG V A + +P+ G++P+ ++Y +I GL K +A
Sbjct: 790 ---IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
Query: 264 LKLEMDKK 271
LK +M +K
Sbjct: 847 LKEKMIEK 854
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 209/474 (44%), Gaps = 54/474 (11%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A V + M + G P + L+ + ++ A+ V+ +MI SP + T + V+
Sbjct: 174 ALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVV- 232
Query: 64 TNAFAGTG-IEVALEILREMPER-GLTADAVSYCHVICA-LLLPPEEKLGKAFEMKKDMD 120
NA+ +G ++ A+ +E GL + V+Y +I ++ E + + + M
Sbjct: 233 -NAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRL---MS 288
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
++G+ + VTY LI C G + EA +F E+L D+H Y LM+ YC G+
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKLVADQHMYGVLMDGYCRTGQI 347
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A +H M+ G + N+LI GYC G++ EA +IF M + L P
Sbjct: 348 RDAVRVHDNMIE--------IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS---------- 290
D +Y ++ G C+ +A +L +M +K ++ TY L++ S
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM--TYNILLKGYSRIGAFHDVLS 457
Query: 291 ------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
DE + S+L+ GD +A +L + G L+D +TL+V+++GL
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 339 KIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAH 398
K+ + EAK L FRC PA Y L S+ +K VG ++K A
Sbjct: 518 KMEKVNEAKEILDNVNIFRC--KPAVQTYQAL----SHGYYK--VG-----NLKEAFAVK 564
Query: 399 HTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
M P +YN LI + ++K ++ +E+ G P + + ALI
Sbjct: 565 EYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 213/523 (40%), Gaps = 74/523 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EAE V E + K L + Y L+ +C+ + AV+V MI+ G + N+
Sbjct: 312 MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I +G +E A +I M + L D +Y ++ + +A ++ M
Sbjct: 372 LINGYCKSGQLVE-AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG--YVDEALKLCDQMC 428
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
K ++P +TY +L+ +G + L++ ML RG + DE + L+ G+F
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG-VNADEISCSTLLEALFKLGDF 487
Query: 181 SKAFHLHHEMVHKGFLPDFVT------GF---------------------SPSLVTYNAL 213
++A L ++ +G L D +T G P++ TY AL
Sbjct: 488 NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
+GY +G ++EA + M G+ P Y +ISG K R K +L +E+ +
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
++ TY +LI + G ++KAY + M G + S +
Sbjct: 608 TPTV---------------ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAY--------------IIYDTLIENCSNNEF 379
N L ++ + EA L V F +P Y + + E+ N+
Sbjct: 653 ANSLFRLDKIDEACLLLQKIVDFDLL-LPGYQSLKEFLEASATTCLKTQKIAESVENSTP 711
Query: 380 KRLVGP-AITFSVKVAIKAHHTMLHGNYK------------PDGTVYNLLIFDHSRSLEV 426
K+L+ P I ++V +A L K PD Y +LI + + ++
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 427 HKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIH 469
+KA+ + EM G +P++ + ALIK L G + ++H
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 135/332 (40%), Gaps = 47/332 (14%)
Query: 161 SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSL 220
SPD T ++N YC G KA E + G ++VTYN+LI GY +
Sbjct: 222 SPDVFTCSIVVNAYCRSGNVDKAMVFAKE-------TESSLGLELNVVTYNSLINGYAMI 274
Query: 221 GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
G V+ + R M E G+S + V+Y +I G C K+ + E
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYC-----------------KKGLMEEAEH 317
Query: 281 TYETLMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
+E L E+ ++D+ Y L++ Y G + A ++ M G ++ + L+NG
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 339 KIARTTEAKWYLL----WTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVA 394
K + EA+ W++ P + Y+TL++ G V A
Sbjct: 378 KSGQLVEAEQIFSRMNDWSL------KPDHHTYNTLVD-----------GYCRAGYVDEA 420
Query: 395 IKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
+K M P YN+L+ +SR H +++ M+ G S L++A
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 455 LHYDGRYNEMSWVIHNTLRSCNLSDSELLKVL 486
L G +NE + N L L+D+ L V+
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMI--DRGFSPSLDTYNAV 61
AE V K L P+ Y I C+ + A K+F +++ DR F P TY +
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR-FIPDEYTYTIL 761
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKKD 118
I A AG I A + EM +G+ + V+Y +I L KLG +A +
Sbjct: 762 IHGCAIAGD-INKAFTLRDEMALKGIIPNIVTYNALIKGLC-----KLGNVDRAQRLLHK 815
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRG 158
+ KGI P+++TY LID L G ++EA L +M+ +G
Sbjct: 816 LPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 219/497 (44%), Gaps = 65/497 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +V EEM G + + TY L+ + + R +A+KV EM+ GFSPS+ TYN++I
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKDM 119
A G ++ A+E+ +M E+G D +Y ++ E+ GK A + ++M
Sbjct: 357 SAYARDGM-LDEAMELKNQMAEKGTKPDVFTYTTLLSGF-----ERAGKVESAMSIFEEM 410
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ G P+ T+ I G+ +E +F E ++ G SPD T+ L+ + G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE-INVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
S+ + EM GF+P+ T+N LI Y G ++A+ ++R M + G++
Sbjct: 470 DSEVSGVFKEMKRAGFVPE--------RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD-------- 291
PD +Y V++ L + ++ ++ EM+ R NE TY +L+ ++
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR--CKPNELTYCSLLHAYANGKEIGLMH 579
Query: 292 ---EDTYSSLIN----------------DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
E+ YS +I D L + E+A+ + G+ D TL+
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA--ERAFS---ELKERGFSPDITTLNS 634
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
+++ + +A L + + R F P+ Y++L+ S + F
Sbjct: 635 MVSIYGRRQMVAKANGVLDY-MKERGF-TPSMATYNSLMYMHSR---------SADFGKS 683
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
I +L KPD YN +I+ + R+ + A ++ EM + G VP + + I
Sbjct: 684 EEI--LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 453 KALHYDGRYNEMSWVIH 469
+ D + E V+
Sbjct: 742 GSYAADSMFEEAIGVVR 758
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 204/504 (40%), Gaps = 73/504 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A + + G + +YT LI +F R +AV VF++M + G P+L TYN
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV 248
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-CALLLPPEEKLGKAFEMKKDM 119
++ GT ++ +M G+ DA +Y +I C ++ + FE +M
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE---EM 305
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G D VTY L+D R EA + EM+ GFSP TY +L++ Y G
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV-LNGFSPSIVTYNSLISAYARDGM 364
Query: 180 FSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNA 212
+A L ++M KG PD T G P++ T+NA
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
I Y + G+ E ++IF + GLSPD V++ +++ + + + EM KR
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM--KR 482
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
+ + + +T+++LI+ Y G E+A + M G D T +
Sbjct: 483 AGF-------------VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE------------FK 380
+L L + +++ L RC P + Y +L+ +N + +
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRC--KPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 381 RLVGP-AITFSVKVAI-----------KAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHK 428
++ P A+ V + +A + + PD T N ++ + R V K
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 429 AYNMYMEMVHYGFVPHMFSVLALI 452
A + M GF P M + +L+
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLM 671
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 27/349 (7%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+E V +EM G P T+ LI ++ + +A+ V+R M+D G +P L TYN V
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ A G E + ++L EM + + ++YC ++ A E +G + +++
Sbjct: 531 LAALARGGM-WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE--IGLMHSLAEEVYS 587
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
I P +V + L+ L EA F E+ RG FSPD T ++++ Y + +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQMVA 646
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
KA + M +GF +PS+ TYN+L+Y + ++ EI R + G+ PD
Sbjct: 647 KANGVLDYMKERGF--------TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
+SY VI C+ A + EM + S + + D TY++ I
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEM--RNSGI-------------VPDVITYNTFIGS 743
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
Y A E+A + M G + T + +++G K+ R EAK ++
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 182/431 (42%), Gaps = 43/431 (9%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMPE 84
+I +E R S A +F + + GFS LD Y+ +AFA +G A+ + ++M E
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFS--LDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 85 RGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRL 144
G ++Y +VI + K + + M GI PD+ TY LI C G L
Sbjct: 237 DGCKPTLITY-NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSL 294
Query: 145 -SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
EA +F EM GFS D+ TY L++ Y +A + +EMV + GF
Sbjct: 295 HQEAAQVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV--------LNGF 345
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
SPS+VTYN+LI Y G + EA+E+ M E G PD +Y ++SG + + A
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY 323
+ EM + C + T+++ I Y +G + ++ + G
Sbjct: 406 IFEEM-RNAGC--------------KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 324 LSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV 383
D VT + LL + +E ++ R +P ++TLI S
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSG--VFKEMKRAGFVPERETFNTLISAYSR------- 501
Query: 384 GPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
S + A+ + ML PD + YN ++ +R ++ + EM P
Sbjct: 502 ----CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 444 HMFSVLALIKA 454
+ + +L+ A
Sbjct: 558 NELTYCSLLHA 568
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 152/393 (38%), Gaps = 63/393 (16%)
Query: 111 KAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNL 170
+AF+ D + D+ ++I L GR+S A ++F L GFS D ++Y +L
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNG-LQEDGFSLDVYSYTSL 214
Query: 171 MNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT----------------------------G 202
++ + G + +A ++ +M G P +T G
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 203 FSPSLVTYNALIYGYCSLGRV-QEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
+P TYN LI C G + QEA ++F M G S D V+Y ++ K P +A
Sbjct: 275 IAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 262 YELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
++ LNE + TY+SLI+ Y G L++A +L M
Sbjct: 334 MKV------------LNEMVLNGFSPSIV---TYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF--FRCFGMPAYIIYDTLIENCSNNEF 379
G D T + LL+G + + A ++F R G I C+ N F
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESA-----MSIFEEMRNAGCKPNI--------CTFNAF 425
Query: 380 KRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHY 439
++ G F+ + I + PD +N L+ ++ + ++ EM
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVC--GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 440 GFVPHMFSVLALIKALHYDGRYNEMSWVIHNTL 472
GFVP + LI A G + + V L
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A VL+ M +G TP TY L++ + + K+ ++ RE++ +G P + +YN
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPP--EEKLGKAFEMKKD 118
VI T + A I EM G+ D ++Y I + EE +G M K
Sbjct: 705 VIYAYC-RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK- 762
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH 156
G P+ TY ++D C + R EA LF E L
Sbjct: 763 ---HGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVEDLR 796
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 181/393 (46%), Gaps = 38/393 (9%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
++Y + +E TY+ ++ C++ + AV R + PS+ ++N+++ G
Sbjct: 177 DVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
+++A + + GL S+ +I L L + +A E+ DM+ G+ PDSV
Sbjct: 237 F-VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS--IAEALELASDMNKHGVEPDSV 293
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
TY +L +G +S A+++ R+ML +G SPD TY L+ C G L +
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M+ +GF + S++ + ++ G C GR+ EAL +F M GLSPD V+Y VI
Sbjct: 353 MLSRGFELN-------SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 250 SGLCKIREPVKAYELKLEMDKKR--------SCLSLNEDTYETLMEQLSDEDT------- 294
GLCK+ + A L EM KR L L L+E S D+
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465
Query: 295 -----YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWY 349
Y+ +I+ Y G +E+A +L V+ G T + L+ G K EA+
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 350 LLWTVFFRCFGM-PAYIIYDTLIE---NCSNNE 378
L + +G+ P+ + Y TL++ NC N +
Sbjct: 526 L---DVIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 162/377 (42%), Gaps = 33/377 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA E+ +M G+ P TY L F S A +V R+M+D+G SP + TY
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G I++ L +L++M RG +++ C V+ + L ++ +A + M
Sbjct: 333 LLCGQCQLGN-IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG-RIDEALSLFNQMK 390
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ PD V Y ++I LC +G+ A L+ EM + P+ T+ L+ C +G
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR-ILPNSRTHGALLLGLCQKGML 449
Query: 181 SKAFHLHHEMVHKGFLPDFV---------------------------TGFSPSLVTYNAL 213
+A L ++ G D V TG +PS+ T+N+L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
IYGYC + EA +I + GL+P VSY ++ EL+ EM K
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM--KAE 567
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+ TY + + L + + N L + EK Q M +G D +T + +
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHEN-CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 334 LNGLNKIARTTEAKWYL 350
+ L ++ + A +L
Sbjct: 627 IQYLCRVKHLSGAFVFL 643
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 174/441 (39%), Gaps = 110/441 (24%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A EV+ +M KGL+P TYT L+ CQ + + ++M+ RGF + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKK 117
V+ + I+ AL + +M GL+ D V+Y VI L KLGK A +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC-----KLGKFDMALWLYD 422
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M DK ILP+S T+ L+ LC G L EA L ++ G + D Y +++ Y
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYAKS 481
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTY 210
G +A L ++ G P T G +PS+V+Y
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 211 NALIYGYCSLGRVQEALE-------------------IFRG------------------- 232
L+ Y + G + E IF+G
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 233 ---------MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYE 283
M G+ PD ++Y +I LC+++ A+ LE+ K R+ L + TY
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF-LEIMKSRN-LDASSATYN 659
Query: 284 TLMEQLS----------------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
L++ L + Y++LI + +GD E A +L + + H
Sbjct: 660 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Query: 322 GYLSDNVTLSVLLNGLNKIAR 342
G+ NV++ +N++ R
Sbjct: 720 GF---NVSIRDYSAVINRLCR 737
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 188/438 (42%), Gaps = 61/438 (13%)
Query: 42 VFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICAL 101
+ ++M D+ + S +YN+V+ + + ++ +E+ ++ + +Y V+ L
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVL----YHFRETDKMWDVYKEIKDK----NEHTYSTVVDGL 197
Query: 102 LLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFS 161
++KL A + + K I P V++ ++ C +G + A F +L + G
Sbjct: 198 C--RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL-KCGLV 254
Query: 162 PDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLG 221
P +++ L+N CL G ++A L +M G PD VT YN L G+ LG
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT--------YNILAKGFHLLG 306
Query: 222 RVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDT 281
+ A E+ R M + GLSPD ++Y ++ G C++ ++M L L +D
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG--------NIDMG-----LVLLKDM 353
Query: 282 YETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIA 341
E L+ S +++ G +++A L M DG D V S++++GL K+
Sbjct: 354 LSRGFE-LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 342 RTTEAKWY------------------LLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV 383
+ A W LL + + + A + D+LI S+ E +V
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI---SSGETLDIV 469
Query: 384 -------GPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEM 436
G A + ++ A++ ++ P +N LI+ + ++ + +A + +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 437 VHYGFVPHMFSVLALIKA 454
YG P + S L+ A
Sbjct: 530 KLYGLAPSVVSYTTLMDA 547
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 202/444 (45%), Gaps = 48/444 (10%)
Query: 6 EVLEEMYHK----GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+++ +YHK G++ ++T LIH FC+ SR S A+ + +M+ GF PS+ T ++
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 62 IQTNAFA-GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ N F G + A+ ++ M G + V Y VI L L A E+ M+
Sbjct: 156 L--NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC--KNRDLNNALEVFYCME 211
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KGI D+VTY LI L GR ++A L R+M+ R P+ + L++ + +G
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNL 270
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A +L+ EM+ + +P+ + TYN+LI G+C G + +A +F M G P
Sbjct: 271 LEARNLYKEMIRRSVVPN--------VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D V+Y +I+G CK + +L EM TY+ L + D TY++LI+
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEM------------TYQGL---VGDAFTYNTLIH 367
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
Y G L A ++ M G D VT ++LL+ L + +A L+ +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA---LVMVEDLQKSE 424
Query: 361 MPAYII-YDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFD 419
M II Y+ +I+ G T +K A ++ KPD Y +I
Sbjct: 425 MDVDIITYNIIIQ-----------GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 420 HSRSLEVHKAYNMYMEMVHYGFVP 443
R +A + M GF+P
Sbjct: 474 LCRKGLQREADKLCRRMKEDGFMP 497
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 144/328 (43%), Gaps = 44/328 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A EV M KG+ TY LI R + A ++ R+M+ R P++ + A
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I T G +E A + +EM R + + +Y +I + LG A M M
Sbjct: 260 LIDTFVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLINGFCI--HGCLGDAKYMFDLMV 316
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG PD VTY LI C R+ + LF EM ++G D TY L++ YC G+
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTLIHGYCQAGKL 375
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
+ A + + MV G PD VT ++TYN +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I G C +++EA +FR + G+ PD ++Y +ISGLC+ L+ E DK
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR-------KGLQREADK--L 486
Query: 274 CLSLNEDTYETLMEQLSDE---DTYSSL 298
C + ED + E++ DE D Y+SL
Sbjct: 487 CRRMKEDGFMP-SERIYDETLRDHYTSL 513
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 159/344 (46%), Gaps = 27/344 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +++ M G P+ Y +I+ C+ + A++VF M +G TYN +I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ +G + A +LR+M +R + + + + +I + E L +A + K+M +
Sbjct: 227 SGLSNSGRWTDAA-RLLRDMVKRKIDPNVIFFTALIDTFV--KEGNLLEARNLYKEMIRR 283
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
++P+ TY LI+ C G L +A +F M+ +G F PD TY L+ +C
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSKRVED 342
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
L EM ++G + D TYN LI+GYC G++ A ++F M + G+SPD
Sbjct: 343 GMKLFCEMTYQGLVGD--------AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
V+Y ++ LC + KA L + ED ++ M+ D TY+ +I
Sbjct: 395 VTYNILLDCLCNNGKIEKA-------------LVMVEDLQKSEMD--VDIITYNIIIQGL 439
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
L++A+ L + G D + +++GL + EA
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 46/389 (11%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
K AF + +M +P V + ++ + + + L+ +M G S D +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSF 117
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
L++C+C S A L +M+ GF PS+VT +L+ G+C R QEA+
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMK--------LGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ M G P+ V Y VI+GLCK R+ A E+ M+KK + + TY TL+
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG--IRADAVTYNTLIS 227
Query: 288 QLSDEDT----------------------YSSLINDYLAQGDLEKAYQLDYVMGHDGYLS 325
LS+ +++LI+ ++ +G+L +A L M +
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 326 DNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGP 385
+ T + L+NG +AK+ V CF P + Y+TLI G
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF--PDVVTYNTLI-----------TGF 334
Query: 386 AITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHM 445
+ V+ +K M + D YN LI + ++ +++ A ++ MV G P +
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 446 FSVLALIKALHYDGRYNEMSWVIHNTLRS 474
+ L+ L +G+ + ++ + +S
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKS 423
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 181/393 (46%), Gaps = 38/393 (9%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
++Y + +E TY+ ++ C++ + AV R + PS+ ++N+++ G
Sbjct: 177 DVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
+++A + + GL S+ +I L L + +A E+ DM+ G+ PDSV
Sbjct: 237 F-VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS--IAEALELASDMNKHGVEPDSV 293
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
TY +L +G +S A+++ R+ML +G SPD TY L+ C G L +
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKG-LSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M+ +GF + S++ + ++ G C GR+ EAL +F M GLSPD V+Y VI
Sbjct: 353 MLSRGFELN-------SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 250 SGLCKIREPVKAYELKLEMDKKR--------SCLSLNEDTYETLMEQLSDEDT------- 294
GLCK+ + A L EM KR L L L+E S D+
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465
Query: 295 -----YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWY 349
Y+ +I+ Y G +E+A +L V+ G T + L+ G K EA+
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 350 LLWTVFFRCFGM-PAYIIYDTLIE---NCSNNE 378
L + +G+ P+ + Y TL++ NC N +
Sbjct: 526 L---DVIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 162/377 (42%), Gaps = 33/377 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA E+ +M G+ P TY L F S A +V R+M+D+G SP + TY
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G I++ L +L++M RG +++ C V+ + L ++ +A + M
Sbjct: 333 LLCGQCQLGN-IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG-RIDEALSLFNQMK 390
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ PD V Y ++I LC +G+ A L+ EM + P+ T+ L+ C +G
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR-ILPNSRTHGALLLGLCQKGML 449
Query: 181 SKAFHLHHEMVHKGFLPDFV---------------------------TGFSPSLVTYNAL 213
+A L ++ G D V TG +PS+ T+N+L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
IYGYC + EA +I + GL+P VSY ++ EL+ EM K
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM--KAE 567
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+ TY + + L + + N L + EK Q M +G D +T + +
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHEN-CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 334 LNGLNKIARTTEAKWYL 350
+ L ++ + A +L
Sbjct: 627 IQYLCRVKHLSGAFVFL 643
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 174/441 (39%), Gaps = 110/441 (24%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A EV+ +M KGL+P TYT L+ CQ + + ++M+ RGF + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKK 117
V+ + I+ AL + +M GL+ D V+Y VI L KLGK A +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC-----KLGKFDMALWLYD 422
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M DK ILP+S T+ L+ LC G L EA L ++ G + D Y +++ Y
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYAKS 481
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTY 210
G +A L ++ G P T G +PS+V+Y
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 211 NALIYGYCSLGRVQEALE-------------------IFRG------------------- 232
L+ Y + G + E IF+G
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 233 ---------MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYE 283
M G+ PD ++Y +I LC+++ A+ LE+ K R+ L + TY
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF-LEIMKSRN-LDASSATYN 659
Query: 284 TLMEQLS----------------------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
L++ L + Y++LI + +GD E A +L + + H
Sbjct: 660 ILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Query: 322 GYLSDNVTLSVLLNGLNKIAR 342
G+ NV++ +N++ R
Sbjct: 720 GF---NVSIRDYSAVINRLCR 737
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 188/438 (42%), Gaps = 61/438 (13%)
Query: 42 VFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICAL 101
+ ++M D+ + S +YN+V+ + + ++ +E+ ++ + +Y V+ L
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVL----YHFRETDKMWDVYKEIKDK----NEHTYSTVVDGL 197
Query: 102 LLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFS 161
++KL A + + K I P V++ ++ C +G + A F +L + G
Sbjct: 198 C--RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL-KCGLV 254
Query: 162 PDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLG 221
P +++ L+N CL G ++A L +M G PD VT YN L G+ LG
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT--------YNILAKGFHLLG 306
Query: 222 RVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDT 281
+ A E+ R M + GLSPD ++Y ++ G C++ ++M L L +D
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--------IDMG-----LVLLKDM 353
Query: 282 YETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIA 341
E L+ S +++ G +++A L M DG D V S++++GL K+
Sbjct: 354 LSRGFE-LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 342 RTTEAKWY------------------LLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV 383
+ A W LL + + + A + D+LI S+ E +V
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI---SSGETLDIV 469
Query: 384 -------GPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEM 436
G A + ++ A++ ++ P +N LI+ + ++ + +A + +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 437 VHYGFVPHMFSVLALIKA 454
YG P + S L+ A
Sbjct: 530 KLYGLAPSVVSYTTLMDA 547
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 206/490 (42%), Gaps = 64/490 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +LE KG P Y C++ + + +A+KVF EM + +P+L TYN +I
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
AG ++ A E+ M + GL + + I L +KL +A M ++MD K
Sbjct: 385 DMLCRAGK-LDTAFELRDSMQKAGLFPNVRTV--NIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
PD +T+ LID L VGR+ +A+ ++ +ML + Y +L+ + G
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD-SDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 183 AFHLHHEMVHKGFLPD-----------FVTG----------------FSPSLVTYNALIY 215
++ +M+++ PD F G F P +Y+ LI+
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCL 275
G G E E+F M E G DT +Y VI G CK + KAY+L EM K
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK---- 616
Query: 276 SLNEDTYETLMEQLSDEDTYSSLINDYLAQGD-LEKAYQLDYVMGHDGYLSDNVTL-SVL 333
+E + TY S+I D LA+ D L++AY L + + NV + S L
Sbjct: 617 -----GFEPTVV------TYGSVI-DGLAKIDRLDEAYML-FEEAKSKRIELNVVIYSSL 663
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKV 393
++G K+ R EA YL+ + P +++L++ E +
Sbjct: 664 IDGFGKVGRIDEA--YLILEELMQKGLTPNLYTWNSLLDALVKAE-----------EINE 710
Query: 394 AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
A+ +M P+ Y +LI + + +KA+ + EM G P S +I
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 454 ALHYDGRYNE 463
L G E
Sbjct: 771 GLAKAGNIAE 780
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 195/456 (42%), Gaps = 40/456 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + EEM +K TP E T+ LI + R A KV+ +M+D + Y +
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I+ N F E +I ++M + + D + + E + G+A M +++
Sbjct: 488 LIK-NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA--MFEEIK 544
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ +PD+ +Y +LI L G +E ++LF M +G D Y +++ +C G+
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL-DTRAYNIVIDGFCKCGKV 603
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+KA+ L EM K GF P++VTY ++I G + R+ EA +F +
Sbjct: 604 NKAYQLLEEMKTK--------GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ V Y +I G K+ +AY + E+ +K L + Y T++SL++
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQK----GLTPNLY-----------TWNSLLD 700
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
+ ++ +A M + VT +L+NGL K+ + +A ++ W +
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA--FVFWQEMQKQGM 758
Query: 361 MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH 420
P+ I Y T+I G A ++ A PD YN +I
Sbjct: 759 KPSTISYTTMIS-----------GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 421 SRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALH 456
S A++++ E G H + + L+ LH
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLH 843
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 136/326 (41%), Gaps = 49/326 (15%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+ + EE+ + P R+Y+ LIH + A++ ++F M ++G YN VI
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ F G + A ++L EM +G V+Y VI L ++L +A+ + ++
Sbjct: 595 --DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL--AKIDRLDEAYMLFEEAKS 650
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRG----------------------- 158
K I + V Y LID VGR+ EA+ + E++ +G
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 159 -----------GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSL 207
+P++ TY L+N C +F+KAF EM +G PS
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM--------KPST 762
Query: 208 VTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLE 267
++Y +I G G + EA +F G PD+ Y +I GL + A+ L E
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Query: 268 MDKKRSCLSLNEDTYETLMEQLSDED 293
+R L ++ T L++ L D
Sbjct: 823 T--RRRGLPIHNKTCVVLLDTLHKND 846
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 172/444 (38%), Gaps = 52/444 (11%)
Query: 37 SKAVKVFREMIDRGFSPSL-DTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYC 95
++A++ FR R P ++YN+++ A + +IL EM G +V+ C
Sbjct: 79 NRAIEYFRWYERRTELPHCPESYNSLLLVMARC-RNFDALDQILGEMSVAGF-GPSVNTC 136
Query: 96 HVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREML 155
+ L KL + +++ + M P Y LI V LF++M
Sbjct: 137 -IEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM- 194
Query: 156 HRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIY 215
G+ P H + L+ + +G A L EM D +V YN I
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD--------IVLYNVCID 246
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL--KLEMDKKRS 273
+ +G+V A + F + GL PD V+Y +I LCK +A E+ LE +++
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
C TY Y+++I Y + G ++AY L G + + + +
Sbjct: 307 C------TY-----------AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 334 LNGLNKIARTTEAKWYLLWTVF--FRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFS 390
L L K+ + EA VF + P Y+ LI+ C +
Sbjct: 350 LTCLRKMGKVDEA-----LKVFEEMKKDAAPNLSTYNILIDMLCRAGK------------ 392
Query: 391 VKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
+ A + +M P+ N+++ +S ++ +A M+ EM + P + +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 451 LIKALHYDGRYNEMSWVIHNTLRS 474
LI L GR ++ V L S
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDS 476
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 158/341 (46%), Gaps = 28/341 (8%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
V +M G+ P TY L++ A +VF M P + TYN +I+
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
AG + A+E LR+M RG AD ++Y +I A + G + ++MD+KGI
Sbjct: 269 KAGQ-TQKAMEKLRDMETRGHEADKITYMTMIQACY--ADSDFGSCVALYQEMDEKGIQV 325
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+ ++I LC G+L+E + +F M+ +G P+ Y L++ Y G A L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
H M+ +GF PD +VTY+ ++ G C GRV+EAL+ F GL+ +++ Y
Sbjct: 385 LHRMIDEGFKPD--------VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQG 306
+I GL K +A L EM +K D+Y Y++LI+ +
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEK----GCTRDSY-----------CYNALIDAFTKHR 481
Query: 307 DLEKAYQLDYVMGHDGYLSDNV-TLSVLLNGLNKIARTTEA 346
+++A L M + V T ++LL+G+ K R EA
Sbjct: 482 KVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 29/345 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
AE V E M + P TY +I +C+ + KA++ R+M RG TY +IQ
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+A + + + +EM E+G+ ++ VI L E KL + + + ++M KG
Sbjct: 301 A-CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC--KEGKLNEGYTVFENMIRKG 357
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
P+ Y VLID G + +A L M+ GF PD TY ++N C G +A
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
H G + + + Y++LI G GRV EA +F M E G + D+
Sbjct: 417 LDYFHTCRF--------DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
Y +I K R+ +A L M+++ C ++ Y TY+ L++
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGC---DQTVY-----------TYTILLSGMF 514
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL---NKIARTTE 345
+ E+A +L +M G L GL K+AR +
Sbjct: 515 KEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK 559
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 30/369 (8%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
+EM KG+ ++ +I C+E + ++ VF MI +G P++ Y +I A +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G+ +E A+ +L M + G D V+Y V+ L ++ +A + G+ +S
Sbjct: 376 GS-VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC--KNGRVEEALDYFHTCRFDGLAINS 432
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
+ Y LID L GR+ EA LF EM +G + D + Y L++ + + +A L
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKG-CTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
M + G ++ TY L+ G R +EAL+++ M + G++P +R +
Sbjct: 492 RMEEE-------EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
+GLC L R+C L+E ++ + ED +IN G +
Sbjct: 545 STGLC------------LSGKVARACKILDELAPMGVILDAACED----MINTLCKAGRI 588
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL---LWTVFFRCFGMPAYI 365
++A +L + G +V++N L K+ + A + + + R + +
Sbjct: 589 KEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRV 648
Query: 366 IYDTLIENC 374
+ TL+E C
Sbjct: 649 KFTTLLETC 657
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 17/264 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E V E M KG P+ YT LI + + A+++ MID GF P + TY+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ N G +E AL+ GL +++ Y +I L ++ +A + ++M
Sbjct: 403 VV--NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG--LGKAGRVDEAERLFEEM 458
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+KG DS Y LID ++ EA LF+ M G +TY L++ +
Sbjct: 459 SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 518
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A L M+ K G +P+ + AL G C G+V A +I + MG+
Sbjct: 519 NEEALKLWDMMIDK--------GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Query: 240 PDTVSYRQVISGLCK---IREPVK 260
D +I+ LCK I+E K
Sbjct: 571 LDAAC-EDMINTLCKAGRIKEACK 593
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 135/324 (41%), Gaps = 42/324 (12%)
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
LI + +G + E ++R+M G P +TY LMN + F + E++
Sbjct: 192 ALIKSFGKLGMVEELLWVWRKM-KENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVME 249
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS-- 250
G + P +VTYN +I GYC G+ Q+A+E R M G D ++Y +I
Sbjct: 250 SGRI-------KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 251 ------GLC----------KIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
G C I+ P A+ L + K L+ +E ++ + S +
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 295 --YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
Y+ LI+ Y G +E A +L + M +G+ D VT SV++NGL K R EA Y
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY-FH 421
Query: 353 TVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTV 412
T F + + + Y +LI+ G V A + M D
Sbjct: 422 TCRFDGLAINS-MFYSSLID-----------GLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 413 YNLLIFDHSRSLEVHKAYNMYMEM 436
YN LI ++ +V +A ++ M
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRM 493
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 109/296 (36%), Gaps = 63/296 (21%)
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG------------------------- 237
F ++ NALI + LG V+E L ++R M E G
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 238 ----------LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+ PD V+Y +I G CK + KA E +M+ +
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR---------------G 287
Query: 288 QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
+D+ TY ++I A D L M G S+++ GL K + E
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG- 346
Query: 348 WYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYK 407
Y ++ R P IY LI+ G A + SV+ AI+ H M+ +K
Sbjct: 347 -YTVFENMIRKGSKPNVAIYTVLID-----------GYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 408 PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
PD Y++++ ++ V +A + + G + +LI L GR +E
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 34/334 (10%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
V E++ GL PH + T L++S ++ K+F++M+ G ++ YN ++ +
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKKDMDDKG 123
+G E A ++L EM E+G+ D +Y +I C + E A ++ M+ G
Sbjct: 215 KSGDP-EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFE-----ALSVQDRMERSG 268
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P+ VTY I GR+ EA LFRE+ + + + TY L++ YC + +A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L M +GF SP +VTYN+++ C GR++EA + M + PD +
Sbjct: 327 LRLREVMESRGF--------SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNI 378
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+ +I+ CKI + V A ++K +M + L D Y +Y +LI+ +
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIES----GLKLDMY-----------SYKALIHGFC 423
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
+LE A + + M G+ T S L++G
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 155/347 (44%), Gaps = 34/347 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+AE++L EM KG+ P TY LI +C++S +A+ V M G +P++ TYN+ I
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFI 280
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKKDM 119
+ G E A + RE+ + +TA+ V+Y +I C + + +A +++ M
Sbjct: 281 HGFSREGRMRE-ATRLFREIKD-DVTANHVTYTTLIDGYCRM-----NDIDEALRLREVM 333
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ +G P VTY ++ LC GR+ EA L EM + PD T L+N YC +
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK-KIEPDNITCNTLINAYCKIED 392
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A + +M+ G D + +Y ALI+G+C + ++ A E M E G S
Sbjct: 393 MVSAVKVKKKMIESGLKLD--------MYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P +Y ++ G + + +L E +K+ C +D Y LI
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC---------------ADVALYRGLI 489
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
++ A L M G + D+V + + + + TEA
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 117/307 (38%), Gaps = 65/307 (21%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMID-------------- 48
EA V + M G+ P+ TY IH F +E R +A ++FRE+ D
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLID 315
Query: 49 --------------------RGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLT 88
RGFSP + TYN++++ G I A +L EM + +
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGR-IREANRLLTEMSGKKIE 374
Query: 89 ADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
D ++ C+ + E+ + A ++KK M + G+ D +Y+ LI C V L A
Sbjct: 375 PDNIT-CNTLINAYCKIEDMVS-AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV-------- 200
+ M+ +G FSP TY L++ + Q + + L E +G D
Sbjct: 433 EELFSMIEKG-FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 201 -------------------TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
G V + + Y Y G+V EA +F M L +
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Query: 242 TVSYRQV 248
Y+ +
Sbjct: 552 LKLYKSI 558
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A +V ++M GL +Y LIH FC+ A + MI++GFSP TY+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMKK 117
++ E+ ++L E +RGL AD Y IC L E++ A + +
Sbjct: 453 LVDGFYNQNKQDEIT-KLLEEFEKRGLCADVALYRGLIRRICKL-----EQVDYAKVLFE 506
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR 157
M+ KG++ DSV + + G+++EA LF M +R
Sbjct: 507 SMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR 546
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A + EM P TY LI++ + + A+ + +M+ +PS TYN +I
Sbjct: 29 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 88
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+G E ALE+ ++M + G+ D V++ V+ A + KA + M
Sbjct: 89 NACGSSGNWRE-ALEVCKKMTDNGVGPDLVTHNIVLSAY--KSGRQYSKALSYFELMKGA 145
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH-RGGFSPDEHTYFNLMNCYCLQGEFS 181
+ PD+ T+ ++I L +G+ S+A DLF M R PD T+ ++M+ Y ++GE
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+ MV +G P++V+YNAL+ Y G AL + + + G+ PD
Sbjct: 206 NCRAVFEAMVAEGL--------KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 257
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
VSY +++ + R+P KA E+ L M K+R + + TY++LI+
Sbjct: 258 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKER---------------RKPNVVTYNALIDA 302
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
Y + G L +A ++ M DG + V++ LL ++
Sbjct: 303 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A VL ++ G+ P +YTCL++S+ + + KA +VF M P++ TYNA+I
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI- 300
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICA-----------LLLPPEEKLG- 110
+A+ G + A+EI R+M + G+ + VS C ++ A +L + G
Sbjct: 301 -DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 111 ---------------------KAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD 149
KA + + M K + DSVT+ +LI C + + EA
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+EM + Y +++ Y QG+ ++A + ++M G PD ++
Sbjct: 420 YLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD--------VIA 470
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
Y ++++ Y + + +A E+F M G+ PD+++ ++ K +P + L
Sbjct: 471 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 525
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 39/349 (11%)
Query: 106 EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
++ G FEM+K PD+ TY+ LI+ G+ A +L +ML R +P
Sbjct: 28 DQARGLFFEMQK----WSCKPDAETYDALINAHGRAGQWRWAMNLMDDML-RAAIAPSRS 82
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
TY NL+N G + +A + +M G PD LVT+N ++ Y S + +
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLSAYKSGRQYSK 134
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
AL F M + PDT ++ +I L K+ + +A +L M +KR+
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA------------ 182
Query: 286 MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
E D T++S+++ Y +G++E + M +G + V+ + L+ G + +
Sbjct: 183 -ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM-GAYAVHGMSG 240
Query: 346 AKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGN 405
+L + II D + C N + R P V + ++
Sbjct: 241 TALSVLGDI------KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR----- 289
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
KP+ YN LI + + + +A ++ +M G P++ SV L+ A
Sbjct: 290 -KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A + + M K + T+T LI C+ S+ +A+ +EM D + + Y++
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V+ + G E A I +M G D ++Y ++ A EK GKA E+ +M+
Sbjct: 439 VLCAYSKQGQVTE-AESIFNQMKMAGCEPDVIAYTSMLHA--YNASEKWGKACELFLEME 495
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN-CYCLQGE 179
GI PDS+ L+ G+ S F L +++ +F + + C LQ E
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLM-DLMREKEIPFTGAVFFEIFSACNTLQ-E 553
Query: 180 FSKAFH---------------LHHEMVH------------KGFLPDFVTGFSPSLVTYNA 212
+ +A L ++M+H K F +G +L TY
Sbjct: 554 WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 613
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
L+ ++G ++ +E+ M G+ P YR +IS
Sbjct: 614 LLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A + EM P TY LI++ + + A+ + +M+ +PS TYN +I
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 220
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+G E ALE+ ++M + G+ D V++ V+ A + KA + M
Sbjct: 221 NACGSSGNWRE-ALEVCKKMTDNGVGPDLVTHNIVLSAY--KSGRQYSKALSYFELMKGA 277
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH-RGGFSPDEHTYFNLMNCYCLQGEFS 181
+ PD+ T+ ++I L +G+ S+A DLF M R PD T+ ++M+ Y ++GE
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+ MV +G P++V+YNAL+ Y G AL + + + G+ PD
Sbjct: 338 NCRAVFEAMVAEGL--------KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 389
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
VSY +++ + R+P KA E+ L M K+R + + TY++LI+
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKER---------------RKPNVVTYNALIDA 434
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
Y + G L +A ++ M DG + V++ LL ++
Sbjct: 435 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A VL ++ G+ P +YTCL++S+ + + KA +VF M P++ TYNA+I
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI- 432
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICA-----------LLLPPEEKLG- 110
+A+ G + A+EI R+M + G+ + VS C ++ A +L + G
Sbjct: 433 -DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 111 ---------------------KAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD 149
KA + + M K + DSVT+ +LI C + + EA
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+EM + Y +++ Y QG+ ++A + ++M G PD ++
Sbjct: 552 YLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD--------VIA 602
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
Y ++++ Y + + +A E+F M G+ PD+++ ++ K +P + L
Sbjct: 603 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 657
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 39/349 (11%)
Query: 106 EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
++ G FEM+K PD+ TY+ LI+ G+ A +L +ML R +P
Sbjct: 160 DQARGLFFEMQK----WSCKPDAETYDALINAHGRAGQWRWAMNLMDDML-RAAIAPSRS 214
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
TY NL+N G + +A + +M G PD LVT+N ++ Y S + +
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLSAYKSGRQYSK 266
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
AL F M + PDT ++ +I L K+ + +A +L M +KR+
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA------------ 314
Query: 286 MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
E D T++S+++ Y +G++E + M +G + V+ + L+ G + +
Sbjct: 315 -ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM-GAYAVHGMSG 372
Query: 346 AKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGN 405
+L + II D + C N + R P V + ++
Sbjct: 373 TALSVLGDI------KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR----- 421
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
KP+ YN LI + + + +A ++ +M G P++ SV L+ A
Sbjct: 422 -KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 33/278 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A + + M K + T+T LI C+ S+ +A+ +EM D + + Y++
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V+ + G E A I +M G D ++Y ++ A EK GKA E+ +M+
Sbjct: 571 VLCAYSKQGQVTE-AESIFNQMKMAGCEPDVIAYTSMLHA--YNASEKWGKACELFLEME 627
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN-CYCLQGE 179
GI PDS+ L+ G+ S F L +++ +F + + C LQ E
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLM-DLMREKEIPFTGAVFFEIFSACNTLQ-E 685
Query: 180 FSKAFH---------------LHHEMVH------------KGFLPDFVTGFSPSLVTYNA 212
+ +A L ++M+H K F +G +L TY
Sbjct: 686 WKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
L+ ++G ++ +E+ M G+ P YR +IS
Sbjct: 746 LLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 151/316 (47%), Gaps = 31/316 (9%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVA 75
L P+ TYT L+ + CQ + + + R + D GF Y+ I F G + A
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH-GYFKGGALVDA 261
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
L REM E+G+ D VSY +I L E + +A + M +G+ P+ +TY +I
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDG--LSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
LC +G+L EAF LF +L G DE Y L++ C +G ++AF + +M +
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSV-GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR-- 376
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV--SYRQV--ISG 251
G PS++TYN +I G C GRV EA E+ +G+ ++ T+ SY +V I
Sbjct: 377 ------GIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 252 LCKIREPVKAYELKLEMDKKRSCLSLN-----------EDTYETL--MEQLSDEDTYSSL 298
+ +IR + E K+ MD + L + Y + M+ D TY+++
Sbjct: 431 VLEIRR--RFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 299 INDYLAQGDLEKAYQL 314
I Y G +E+A ++
Sbjct: 489 IKGYCKTGQIEEALEM 504
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 152/335 (45%), Gaps = 34/335 (10%)
Query: 18 PHERTYTCLIHSFC-QESRASKAVKVFREMI-DRGFSPSLDTYNAVIQTNAFAGTGIEVA 75
P LIH F SK + + R+ + + G PS T+ ++I G ++ A
Sbjct: 95 PRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGE-MDNA 153
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKDMDDKGIL-PDSVTY 131
+E+L M + + + + +C+ ++ K+GK A + D G+L P+ VTY
Sbjct: 154 IEVLEMMTNKNVN---YPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTY 210
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
L+ LC +G++ E DL R L GF D Y N ++ Y G A EMV
Sbjct: 211 TTLVSALCQLGKVDEVRDLVRR-LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
KG D +V+Y+ LI G G V+EAL + M + G+ P+ ++Y +I G
Sbjct: 270 EKGMNRD--------VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 252 LCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKA 311
LCK+ + +A+ L LS+ + DE Y +LI+ +G+L +A
Sbjct: 322 LCKMGKLEEAFVLF------NRILSVGIEV---------DEFLYVTLIDGICRKGNLNRA 366
Query: 312 YQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ + M G +T + ++NGL R +EA
Sbjct: 367 FSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 123/588 (20%), Positives = 216/588 (36%), Gaps = 103/588 (17%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + + G+ E Y LI C++ ++A + +M RG PS+ TYN
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
VI AG + A E+ +G+ D ++Y ++ + + + + E+++
Sbjct: 388 VINGLCMAGR-VSEADEV-----SKGVVGDVITYSTLLDSYI--KVQNIDAVLEIRRRFL 439
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I D V +L+ +G EA L+R M +PD TY ++ YC G+
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM-DLTPDTATYATMIKGYCKTGQI 498
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + +E+ + V YN +I C G + A E+ + E GL
Sbjct: 499 EEALEMFNELRKSSV---------SAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYL 549
Query: 241 DTVSYRQVISG-----------------------------------LCKIREPVKAYELK 265
D + R ++ LCK A E+
Sbjct: 550 DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY 609
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLSDEDT-------------------YSSLINDYLAQG 306
+ M +K ++ +TL++ L D Y+ +IN +G
Sbjct: 610 MIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEG 669
Query: 307 DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYII 366
L KA L G + +T + L+NGL + EA L+ +P+ +
Sbjct: 670 FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA--LRLFDSLENIGLVPSEVT 727
Query: 367 YDTLIEN-CSNNEF------------KRLVGPAITFSVKV-----------AIKAHHTML 402
Y LI+N C F K LV I ++ V A++ +
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787
Query: 403 HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYN 462
G PD + +I + + ++ +A +++ E F L LIK GR
Sbjct: 788 MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 847
Query: 463 EMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTALLDVLSEIAMDG 510
E ++ L S ++K++N +D E ++ L E+ G
Sbjct: 848 EARGLLREMLVS-----ESVVKLINRVDAELAESESIRGFLVELCEQG 890
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 120/263 (45%), Gaps = 18/263 (6%)
Query: 54 SLDTYNAVIQTNAFAGTGIEV-ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKA 112
S+D + I N G V AL + RG+T + ++Y +I L + L +A
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLC--QQGCLVEA 709
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
+ +++ G++P VTY +LIDNLC G +A L M+ +G P+ Y ++++
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG-LVPNIIIYNSIVD 768
Query: 173 CYCLQGEFSKAFHL-HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFR 231
YC G+ A + +M+ + +P T +++I GYC G ++EAL +F
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGR---------VTPDAFTVSSMIKGYCKKGDMEEALSVFT 819
Query: 232 GMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD 291
+ +S D + +I G C +A L EM S + L + +L++
Sbjct: 820 EFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKL----INRVDAELAE 875
Query: 292 EDTYSSLINDYLAQGDLEKAYQL 314
++ + + QG + +A ++
Sbjct: 876 SESIRGFLVELCEQGRVPQAIKI 898
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 130/333 (39%), Gaps = 53/333 (15%)
Query: 145 SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF---LPDFVT 201
S+ + R+ L G P T+ +L+ + +GE A + M +K +FV
Sbjct: 115 SKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC 174
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG-LSPDTVSYRQVISGLCKIREPVK 260
+A+I G+C +G+ + AL F + G L P+ V+Y ++S LC++ +
Sbjct: 175 ---------SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKV-- 223
Query: 261 AYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT------YSSLINDYLAQGDLEKAYQL 314
D L+ +L DE YS+ I+ Y G L A
Sbjct: 224 -------------------DEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 315 DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENC 374
D M G D V+ S+L++GL+K EA L + P I Y +I
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALG--LLGKMIKEGVEPNLITYTAIIR-- 320
Query: 375 SNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYM 434
G ++ A + +L + D +Y LI R +++A++M
Sbjct: 321 ---------GLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 435 EMVHYGFVPHMFSVLALIKALHYDGRYNEMSWV 467
+M G P + + +I L GR +E V
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 171/381 (44%), Gaps = 62/381 (16%)
Query: 19 HERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG-TGIEVALE 77
+R + LI S+ ++VK+F+ M G SPS+ T+N+++ G TG+ A +
Sbjct: 137 QDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGM--AHD 194
Query: 78 ILREMPER-GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
+ EM G+T D+ ++ +I + +AF + KDM+ PD VTY +ID
Sbjct: 195 LFDEMRRTYGVTPDSYTFNTLINGFC--KNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252
Query: 137 NLCWVGRLSEAFDLFREMLHRG-GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
LC G++ A ++ ML + P+ +Y L+ YC++ E +A + H+M+ +G
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312
Query: 196 LPDFVT-----------------------------GFSPSLVTYNALIYGYCSLGRVQEA 226
P+ VT F+P T+N LI +C G + A
Sbjct: 313 KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 372
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLN-------- 278
+++F+ M M L PD+ SY +I LC E +A L E+ +K L +
Sbjct: 373 MKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAA 432
Query: 279 -----------------EDTYETLMEQ-LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
E + LM++ + D +Y +LI + +G + AY+L +M
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLR 492
Query: 321 DGYLSDNVTLSVLLNGLNKIA 341
++ D T +L++GL KI
Sbjct: 493 REFVPDLETYELLIDGLLKIG 513
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 77/333 (23%)
Query: 4 AEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
A ++ +EM G+TP T+ LI+ FC+ S +A ++F++M +P + TYN +I
Sbjct: 192 AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 63 QTNAFAGTGIEVALEILREMPERG--LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
AG +++A +L M ++ + + VSY ++ + E + +A + DM
Sbjct: 252 DGLCRAGK-VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE--IDEAVLVFHDML 308
Query: 121 DKGILPDSVTYEVLIDNL-------------------------------------CWVGR 143
+G+ P++VTY LI L C G
Sbjct: 309 SRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGH 368
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL------P 197
L A +F+EML+ PD +Y L+ C++ EF +A L +E+ K L
Sbjct: 369 LDAAMKVFQEMLNMK-LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 198 DFVTGFSPSL---------------------------VTYNALIYGYCSLGRVQEALEIF 230
++P +Y LI G+C G+ + A E+
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELL 487
Query: 231 RGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
M PD +Y +I GL KI E + A++
Sbjct: 488 VLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 131/317 (41%), Gaps = 54/317 (17%)
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM 190
+ LI + G E+ LF+ M + G SP T+ +L++ +G A L EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTM-KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
G +P T+N LI G+C V EA IF+ M +PD V+Y +I
Sbjct: 200 RR-------TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252
Query: 251 GLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEK 310
GLC+ + A+ + M KK + D + ++ +Y++L+ Y + ++++
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKAT------DVHPNVV-------SYTTLVRGYCMKQEIDE 299
Query: 311 AYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTL 370
A + + M G + VT + L+ GL++ R E K D L
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK--------------------DIL 339
Query: 371 IENCSNNEFKRLVGPAITFSVKV-----------AIKAHHTMLHGNYKPDGTVYNLLIFD 419
I N+ F A TF++ + A+K ML+ PD Y++LI
Sbjct: 340 IG--GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397
Query: 420 HSRSLEVHKAYNMYMEM 436
E +A ++ E+
Sbjct: 398 LCMRNEFDRAETLFNEL 414
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
+N+LI Y + G QE++++F+ M +MG+SP +++ ++S L K A++L D
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL---FD 197
Query: 270 KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
+ R + D+Y T+++LIN + +++A+++ M D VT
Sbjct: 198 EMRRTYGVTPDSY-----------TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 330 LSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNE---------- 378
+ +++GL + + A L + P + Y TL+ C E
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 379 -FKRLVGP-AITFS--VKVAIKAHH------TMLHGN-----YKPDGTVYNLLIFDHSRS 423
R + P A+T++ +K +AH ++ GN + PD +N+LI H +
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 424 LEVHKAYNMYMEMVHYGFVPHMFSVLALIKAL 455
+ A ++ EM++ P S LI+ L
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 28/314 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF-------SPSLD 56
A +V +EM + L P +Y+ LI + C + +A +F E+ ++ P
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 431
Query: 57 TYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
YN + + G + A ++ R++ +RG+ D SY +I E K A+E+
Sbjct: 432 AYNPMFEYLCANGKTKQ-AEKVFRQLMKRGVQ-DPPSYKTLITGHC--REGKFKPAYELL 487
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
M + +PD TYE+LID L +G A D + ML R + P T+ +++
Sbjct: 488 VLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML-RSSYLPVATTFHSVLAELAK 546
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+ +++F L M+ K + S +V L++ S + ++A I R + +
Sbjct: 547 RKFANESFCLVTLMLEKRIRQNI--DLSTQVVR---LLF---SSAQKEKAFLIVRLLYDN 598
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
G V +++ LC+ R+ + A+ L L +K + + DT T++E L +S
Sbjct: 599 GY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDI--DTCNTVIEGLCKHKRHS 653
Query: 297 ---SLINDYLAQGD 307
SL N+ + G+
Sbjct: 654 EAFSLYNELVELGN 667
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 206/516 (39%), Gaps = 94/516 (18%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A E E M +G+TP R YT LIH++ +A+ R+M + G SL TY+
Sbjct: 325 MHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSV 384
Query: 61 VIQTNAFAG----------------------------------TGIEVALEILREMPERG 86
++ + AG +E A ++REM E G
Sbjct: 385 IVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG 444
Query: 87 LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSE 146
+ A Y ++ + +EK K + K + + G P VTY LI+ VG++S+
Sbjct: 445 IDAPIAIYHTMMDGYTMVADEK--KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD------FV 200
A ++ R M G + TY ++N + +++ AF + +MV +G PD +
Sbjct: 503 ALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 201 TGF---------------------SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+ F P+ T+ +I+GY G ++ +LE+F M G
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P ++ +I+GL + R+ KA E+ EM TL ++E TY+ ++
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEM---------------TLAGVSANEHTYTKIM 666
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
Y + GD KA++ + ++G D T LL K R A L T
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA---LAVTKEMSAR 723
Query: 360 GMPA-YIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIF 418
+P +Y+ LI+ G A V A M KPD Y I
Sbjct: 724 NIPRNSFVYNILID-----------GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
S++ ++++A EM G P++ + LIK
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M + EV + M G P T+ LI+ ++ + KAV++ EM G S + TY
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 61 VIQTNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++Q A G TG A E + GL D +Y ++ A ++ A + K+M
Sbjct: 665 IMQGYASVGDTG--KAFEYFTRLQNEGLDVDIFTYEALLKACC--KSGRMQSALAVTKEM 720
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ I +S Y +LID G + EA DL ++M + G PD HTY + ++ G+
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM-KKEGVKPDIHTYTSFISACSKAGD 779
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
++A EM G P++ TY LI G+ ++AL + M MG+
Sbjct: 780 MNRATQTIEEME--------ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 240 PDTVSYRQVISGLCKIREPVKAY 262
PD Y +++ L +AY
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEAY 854
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 187/455 (41%), Gaps = 52/455 (11%)
Query: 12 YHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG 71
+ K P + ++ + + +A + F M RG +P+ Y ++I A G
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA-VGRD 359
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVT- 130
++ AL +R+M E G+ V+Y ++ K G A D+ + ++
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGF-----SKAGHAEAADYWFDEAKRIHKTLNA 414
Query: 131 --YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
Y +I C + A L REM G +P Y +M+ Y + + K +
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA-IYHTMMDGYTMVADEKKGLVVFK 473
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
+ GF+P++VTY LI Y +G++ +ALE+ R M E G+ + +Y +
Sbjct: 474 RLKE--------CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
I+G K+++ A+ ++ ED + M+ D Y+++I+ + G++
Sbjct: 526 INGFVKLKDWANAF-------------AVFEDMVKEGMK--PDVILYNNIISAFCGMGNM 570
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK---IARTTEAKWYLLWTVFFRCFGMPAYI 365
++A Q M + T +++G K + R+ E ++ + RC +P
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE-----VFDMMRRCGCVPTVH 625
Query: 366 IYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLE 425
++ LI KR + A+ ++ + H Y ++ ++ +
Sbjct: 626 TFNGLINGLVE---KRQMEKAVEILDEMTLAGVSANEH--------TYTKIMQGYASVGD 674
Query: 426 VHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
KA+ + + + G +F+ AL+KA GR
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 205/488 (42%), Gaps = 83/488 (17%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREM-IDRGFS---PSLDTY 58
++E+++E+M +GL P T+ I + C+E + A ++F +M +D P+ TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 59 NAVIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK- 116
N +++ F G +E A + + E A SY + L+ + GK E +
Sbjct: 295 NLMLK--GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLV-----RHGKFIEAET 347
Query: 117 --KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
K M DKGI P +Y +L+D LC +G LS+A + ++ R G PD TY L++ Y
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNGVCPDAVTYGCLLHGY 406
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
C G+ A L EM+ LP+ T N L++ +GR+ EA E+ R M
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPN--------AYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
E G DTV+ ++ GLC E KA E+ M S N ++
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG------------NS 506
Query: 295 YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTV 354
Y L++D L + + L D +T S LLNGL K R EAK +
Sbjct: 507 YIGLVDDSLIENNC---------------LPDLITYSTLLNGLCKAGRFAEAK-----NL 546
Query: 355 FFRCFG---MPAYIIYDTLIEN-CSNNEF-----------KRLVGPAI----TFSVKVAI 395
F G P + Y+ I + C + K+ ++ + + + I
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 396 KAHHTMLHG--------NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFS 447
K +HG P+ YN I +V A N+ EM+ P++FS
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 448 VLALIKAL 455
LI+A
Sbjct: 667 FKYLIEAF 674
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 157/365 (43%), Gaps = 72/365 (19%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++A+ ++ M G+ P TY CL+H +C + A + +EM+ P+ T N
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM- 119
++ + G I A E+LR+M E+G D V+ C++I L E L KA E+ K M
Sbjct: 437 LLHSLWKMGR-ISEAEELLRKMNEKGYGLDTVT-CNIIVDGLCGSGE-LDKAIEIVKGMR 493
Query: 120 ------------------DDKGI----LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR 157
DD I LPD +TY L++ LC GR +EA +LF EM+
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 158 GGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT---------------- 201
PD Y ++ +C QG+ S AF + +M KG T
Sbjct: 554 K-LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 202 -----------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
G SP++ TYN I C +V++A + M + ++P+ S++ +I
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 251 GLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD-EDTYSSLINDYLAQGDLE 309
CK+ + + ++ +ET + E YS + N+ LA G L
Sbjct: 673 AFCKVPD-----------------FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLL 715
Query: 310 KAYQL 314
KA +L
Sbjct: 716 KATEL 720
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 193/461 (41%), Gaps = 61/461 (13%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+ +EM KG P+E T+ L+ +C+ K +++ M G P+ YN ++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ G + + +++ +M E GL D V++ I AL E K+ A + DM+
Sbjct: 226 SFCREGRN-DDSEKMVEKMREEGLVPDIVTFNSRISALC--KEGKVLDASRIFSDMELDE 282
Query: 124 IL----PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
L P+S+TY +++ C VG L +A LF + + +Y + G+
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-SLQSYNIWLQGLVRHGK 341
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F +A + +M K G PS+ +YN L+ G C LG + +A I M G+
Sbjct: 342 FIEAETVLKQMTDK--------GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
PD V+Y ++ G C + + A L EM + +CL + Y T + L+
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLP---NAY-----------TCNILL 438
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF 359
+ G + +A +L M GY D VT +++++GL + E + R
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL---CGSGELDKAIEIVKGMRVH 495
Query: 360 GMPAY---------IIYDTLIENCSNNEFKRLVGPAITFSVKV-----------AIKAHH 399
G A ++ D+LIEN + IT+S + A
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIEN-------NCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 400 TMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
M+ +PD YN+ I + ++ A+ + +M G
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 194/454 (42%), Gaps = 51/454 (11%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
++M G+ P T+ LI + C S A ++F EM ++G P+ T+ +++ A
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G + LE+L M G+ + V Y ++ + E + + +M + M ++G++PD
Sbjct: 196 GL-TDKGLELLNAMESFGVLPNKVIYNTIVSSFC--REGRNDDSEKMVEKMREEGLVPDI 252
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREML---HRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
VT+ I LC G++ +A +F +M + G P+ TY ++ +C G A
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
L + L SL +YN + G G+ EA + + M + G+ P SY
Sbjct: 313 LFESIRENDDLA--------SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQ 305
++ GLCK+ A + M + C D TY L++ Y +
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVC---------------PDAVTYGCLLHGYCSV 409
Query: 306 GDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY- 364
G ++ A L M + L + T ++LL+ L K+ R +EA+ LL + + +G+
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE-ELLRKMNEKGYGLDTVT 468
Query: 365 --IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKA-------------HHTMLHGNYKPD 409
II D L C + E + + I ++V A +++ N PD
Sbjct: 469 CNIIVDGL---CGSGELDKAI--EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 410 GTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
Y+ L+ ++ +A N++ EM+ P
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 166/402 (41%), Gaps = 60/402 (14%)
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
KDM GI P + T+ +LI LC + A +LF EM +G P+E T+ L+ YC
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKPNEFTFGILVRGYCK 194
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
G K L + M G LP+ V YN ++ +C GR ++ ++ M E
Sbjct: 195 AGLTDKGLELLNAMESFGVLPN--------KVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
GL PD V++ IS LCK E K+ +D R + D Y L + TY+
Sbjct: 247 GLVPDIVTFNSRISALCK--------EGKV-LDASRIFSDMELDEYLGLPR--PNSITYN 295
Query: 297 SLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFF 356
++ + G LE A L + + L+ + ++ L GL + + EA+ +L +
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE-TVLKQMTD 354
Query: 357 RCFGMPAY---IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVY 413
+ G Y I+ D L + ++ K +VG M PD Y
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVG---------------LMKRNGVCPDAVTY 399
Query: 414 NLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLR 473
L+ + +V A ++ EM+ +P+ ++ L+ +L GR +E
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA--------- 450
Query: 474 SCNLSDSELLKVLNEIDFSKPEMTALLDVLSEIAMDGLLLDG 515
ELL+ +NE + L V I +DGL G
Sbjct: 451 ------EELLRKMNEKGY------GLDTVTCNIIVDGLCGSG 480
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 54/274 (19%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFR----------------- 44
EA+ + EM + L P Y IH FC++ + S A +V +
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 45 ------------------EMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERG 86
EM ++G SP++ TYN IQ G +E A +L EM ++
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY-LCEGEKVEDATNLLDEMMQKN 659
Query: 87 LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL---PDSVTYEVLIDNLCWVGR 143
+ + S+ ++I A P+ F+M +++ + + Y ++ + L G+
Sbjct: 660 IAPNVFSFKYLIEAFCKVPD------FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQ 713
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
L +A +L +L R GF Y +L+ C + E A + H+M+ +G+ GF
Sbjct: 714 LLKATELLEAVLDR-GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY------GF 766
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
P+ + +I G +G +EA M EM
Sbjct: 767 DPAALM--PVIDGLGKMGNKKEANSFADKMMEMA 798
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 204/484 (42%), Gaps = 61/484 (12%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
G+ P+ +TY LI C++ KA M GF P + +Y+ VI A AG ++
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK-LDD 202
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEM-KKDMDDKGILPDSVTYEV 133
ALE+ EM ERG+ D Y +I L + K A E+ + ++D + P+ T+ +
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK--TAMELWDRLLEDSSVYPNVKTHNI 260
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
+I L GR+ + ++ E + + D +TY +L++ C G KA + +E+ +
Sbjct: 261 MISGLSKCGRVDDCLKIW-ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 194 GFLPDFVT------GF--------------------SPSLVTYNALIYGYCSLGRVQEAL 227
D VT GF S ++V+YN LI G G++ EA
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
I+R MP G + D +Y I GLC KA + E++ L D Y
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL----DVY----- 430
Query: 288 QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
Y+S+I+ + LE+A L M G ++ + L+ GL + +R EA
Sbjct: 431 ------AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 348 WYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNY 406
++L C P + Y+ LI C +F G A F ML +
Sbjct: 485 FFLREMGKNGC--RPTVVSYNILICGLCKAGKF----GEASAFV--------KEMLENGW 530
Query: 407 KPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSW 466
KPD Y++L+ R ++ A ++ + + G + LI L G+ ++
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 467 VIHN 470
V+ N
Sbjct: 591 VMAN 594
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 168/380 (44%), Gaps = 53/380 (13%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILR 80
TY+ LIH C KA VF E+ +R S + TYN ++ F G I+ +LE+ R
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML--GGFCRCGKIKESLELWR 349
Query: 81 EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
M + + + VSY +I LL K+ +A + + M KG D TY + I LC
Sbjct: 350 IMEHKN-SVNIVSYNILIKGLL--ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG------ 194
G +++A + +E+ GG D + Y ++++C C + +A +L EM G
Sbjct: 407 NGYVNKALGVMQEVESSGG-HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 195 --------------------FLPDF-VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM 233
FL + G P++V+YN LI G C G+ EA + M
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 234 PEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL-SDE 292
E G PD +Y ++ GLC+ R+ A EL ++ L L +D
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALEL----------------WHQFLQSGLETDV 569
Query: 293 DTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
++ LI+ + G L+ A + M H ++ VT + L+ G K+ + A ++W
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT--VIW 627
Query: 353 TVFFRCFGMPAYIIYDTLIE 372
++ P I Y+T+++
Sbjct: 628 GYMYKMGLQPDIISYNTIMK 647
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + M KG + TY IH C +KA+ V +E+ G + Y +
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL--LPPEEKLGKAFEMKKD 118
+I +E A +++EM + G+ ++ HV AL+ L + +LG+A ++
Sbjct: 435 IIDC-LCKKKRLEEASNLVKEMSKHGVELNS----HVCNALIGGLIRDSRLGEASFFLRE 489
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G P V+Y +LI LC G+ EA +EML G+ PD TY L+ C
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE-NGWKPDLKTYSILLCGLCRDR 548
Query: 179 EFSKAFHLHHEMVHKGFLPD------FVTGF---------------------SPSLVTYN 211
+ A L H+ + G D + G + +LVTYN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
L+ G+ +G A I+ M +MGL PD +SY ++ GLC R A E
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +++EM G+ + LI ++SR +A REM G P++ +YN
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I AG E A ++EM E G D +Y ++C L + K+ A E+
Sbjct: 505 LICGLCKAGKFGE-ASAFVKEMLENGWKPDLKTYSILLCGLC--RDRKIDLALELWHQFL 561
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ D + + +LI LC VG+L +A + M HR + + TY LM + G+
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR-NCTANLVTYNTLMEGFFKVGDS 620
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
++A V G++ + G P +++YN ++ G C V A+E F G+ P
Sbjct: 621 NRA------TVIWGYM--YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 241 DTVSYRQVISGL 252
++ ++ +
Sbjct: 673 TVYTWNILVRAV 684
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 118/241 (48%), Gaps = 17/241 (7%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P ++ Y ++ +E++ + A K ++ M + G P++ + N +I+ ++ L+
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 78 ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DMDDKGILPDSVTYEVL 134
I EMP+RG D+ +Y +I L + G+ E KK +M +K P VTY L
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLC-----RFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
I+ LC + EA EM +G P+ TY +LM+ C G +A L M+ +G
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKG-IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
P++VTY LI G C ++QEA+E+ M GL PD Y +VISG C
Sbjct: 293 C--------RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 255 I 255
I
Sbjct: 345 I 345
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 8/260 (3%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++ EM +G P TY LI C+ R +A K+F EM+++ +P++ TY ++I N
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI--N 235
Query: 66 AFAGT-GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
G+ ++ A+ L EM +G+ + +Y ++ L + + +A E+ + M +G
Sbjct: 236 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC--KDGRSLQAMELFEMMMARGC 293
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
P+ VTY LI LC ++ EA +L M + G PD Y +++ +C +F +A
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRM-NLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
+ EM+ G P+ +T ++ + T N ++ G C+ A ++ M G+S + +
Sbjct: 353 NFLDEMILGGITPNRLT-WNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVET 410
Query: 245 YRQVISGLCKIREPVKAYEL 264
++ LCK E KA +L
Sbjct: 411 LESLVKCLCKKGEFQKAVQL 430
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA LEEM KG+ P+ TY+ L+ C++ R+ +A+++F M+ RG P++ TY +I
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKKDM 119
T I+ A+E+L M +GL DA Y VI CA+ K +A +M
Sbjct: 305 -TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAI-----SKFREAANFLDEM 358
Query: 120 DDKGILPDSVTYEV-------LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
GI P+ +T+ + ++ LC S AF L+ M R G S + T +L+
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR-GISVEVETLESLVK 416
Query: 173 CYCLQGEFSKAFHLHHEMVHKGFLP 197
C C +GEF KA L E+V G +P
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 171/414 (41%), Gaps = 46/414 (11%)
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLC-WVGRLSEAFDLFREMLHRGGFS--PDEHTYFN 169
F+ +D+ + + + V E ++ ++C GR+ FD R F P + Y
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 170 LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYC-SLGRVQEALE 228
++ + + + AF + M G P++ + N LI C + G V L+
Sbjct: 127 VLAILVEENQLNLAFKFYKNMRE--------IGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ 288
IF MP+ G PD+ +Y +ISGLC+ +A +L EM +K D T++
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--------DCAPTVV-- 228
Query: 289 LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKW 348
TY+SLIN ++++A + M G + T S L++GL K R+ +A
Sbjct: 229 -----TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 349 YLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKP 408
+ C P + Y TLI + ++ A++ M KP
Sbjct: 284 LFEMMMARGC--RPNMVTYTTLITGLCKEQ-----------KIQEAVELLDRMNLQGLKP 330
Query: 409 DGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR-----YNE 463
D +Y +I + +A N EM+ G P+ + +K + R Y
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPS 390
Query: 464 MSWVIHNTLRSCNLS-DSELLKVLNEIDFSKPEMTALLDVLSEIAMDGLLLDGG 516
++ ++ ++RS +S + E L+ L + K E + ++ EI DG + G
Sbjct: 391 RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 146/382 (38%), Gaps = 81/382 (21%)
Query: 90 DAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV-GRLSEAF 148
D +V +L E +L AF+ K+M + G+ P + VLI LC G +
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLV 208
+F EM RG PD +
Sbjct: 178 KIFLEMPKRG-CDPDSY------------------------------------------- 193
Query: 209 TYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
TY LI G C GR+ EA ++F M E +P V+Y +I+GLC + +A EM
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 269 DKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
K + + + TYSSL++ G +A +L +M G + V
Sbjct: 254 KSK----GIEPNVF-----------TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 329 TLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAI 387
T + L+ GL K + EA LL + + P +Y +I C+ ++F+
Sbjct: 299 TYTTLITGLCKEQKIQEA-VELLDRMNLQGLK-PDAGLYGKVISGFCAISKFRE------ 350
Query: 388 TFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS---RSLEVH---KAYNMYMEMVHYGF 441
A M+ G P+ +N+ + + R L + +A+ +Y+ M G
Sbjct: 351 ------AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGI 404
Query: 442 VPHMFSVLALIKALHYDGRYNE 463
+ ++ +L+K L G + +
Sbjct: 405 SVEVETLESLVKCLCKKGEFQK 426
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 163/343 (47%), Gaps = 27/343 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
E VL+ M G+ ++ TYT L+ + + S A K+F EM +RG + Y ++I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
N G ++ A + E+ E+GL+ + +Y +I + E +G A + +M KG
Sbjct: 338 WNCRKGN-MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE--MGAAEILMNEMQSKG 394
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ V + LID C G + EA + +++ + GF D T + +C+ + +A
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDEA-SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
M+ G S V+Y LI YC G V+EA +F M G+ P+ +
Sbjct: 454 KQWLFRMME--------GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAI 505
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y +I CK + +A +L+ M+ ++ D+Y TY+SLI+
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEAN----GMDPDSY-----------TYTSLIHGEC 550
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
++++A +L MG G ++VT +V+++GL+K ++ EA
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 205/477 (42%), Gaps = 51/477 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E V + M KGL+ ER+ + + + R +++FR M+D G ++ + V+
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G +E + ++++E +G+ +A +Y +I A + + + K M
Sbjct: 232 EGLCRRGE-VEKSKKLIKEFSVKGIKPEAYTYNTIINAYV--KQRDFSGVEGVLKVMKKD 288
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G++ + VTY +L++ G++S+A LF EM R G D H Y +L++ C +G +
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER-GIESDVHVYTSLISWNCRKGNMKR 347
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
AF L E+ K G SPS TY ALI G C +G + A + M G++
Sbjct: 348 AFLLFDELTEK--------GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 243 VSYRQVISGLCK---IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED------ 293
V + +I G C+ + E Y++ + + + N T + +L D
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN--TIASCFNRLKRYDEAKQWL 457
Query: 294 -------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
+Y++LI+ Y +G++E+A +L M G + +T +V++ K
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 341 ARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHH 399
+ EA+ GM P Y +LI G I +V A++
Sbjct: 518 GKIKEARK---LRANMEANGMDPDSYTYTSLIH-----------GECIADNVDEAMRLFS 563
Query: 400 TMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALH 456
M + Y ++I S++ + +A+ +Y EM G+ ALI ++H
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 154/342 (45%), Gaps = 37/342 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M++AE++ +EM +G+ YT LI C++ +A +F E+ ++G SPS TY A
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 61 VIQTNAFAGTGIEVALEIL-REMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMK 116
+I + G A EIL EM +G+ V + +I C + E + +
Sbjct: 370 LI--DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASM-----IY 422
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD-LFREMLHRGGFSPDEHTYFNLMNCYC 175
M+ KG D T + + R EA LFR M GG +Y NL++ YC
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM--EGGVKLSTVSYTNLIDVYC 480
Query: 176 LQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
+G +A L EM KG P+ +TYN +IY YC G+++EA ++ M
Sbjct: 481 KEGNVEEAKRLFVEMSSKGV--------QPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Query: 236 MGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY 295
G+ PD+ +Y +I G C +A L EM K L++++ TY
Sbjct: 533 NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK----GLDQNSV-----------TY 577
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
+ +I+ G ++A+ L M GY DN + L+ +
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E + + EM ++P T+ L++ +C+ +A + +I G P TY + I
Sbjct: 138 EMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFI 197
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
T ++ A ++ +EM + G + VSY +I L +K+ +A + M D
Sbjct: 198 -TGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF--EAKKIDEALSLLVKMKDD 254
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
P+ TY VLID LC G+ SEA +LF++M G PD+ Y L+ +C +
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM-SESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L M+ G +P+ ++TYNALI G+C V +A+ + M E L PD
Sbjct: 314 ASGLLEHMLENGLMPN--------VITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDL 364
Query: 243 VSYRQVISGLCKIREPVKAYEL 264
++Y +I+G C AY L
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRL 386
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 137/343 (39%), Gaps = 52/343 (15%)
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+SV + + + C R ++F++ ++ + Y NL++ G + L
Sbjct: 91 NSVRDALFVVDFCRTMRKGDSFEIKYKLTPK--------CYNNLLSSLARFGLVEEMKRL 142
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
+ EM L D V SP + T+N L+ GYC LG V EA + + + G PD +Y
Sbjct: 143 YTEM-----LEDLV---SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYT 194
Query: 247 QVISGLCKIREPVKAYELKLEMDKK---RSCLSLNE-----------DTYETLMEQLSDE 292
I+G C+ +E A+++ EM + R+ +S + D +L+ ++ D+
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD 254
Query: 293 D------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ TY+ LI+ G +A L M G D+ +VL+ EA
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGN 405
L MP I Y+ LI+ C N K A+ ML N
Sbjct: 315 SG--LLEHMLENGLMPNVITYNALIKGFCKKNVHK-------------AMGLLSKMLEQN 359
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSV 448
PD YN LI S + AY + M G VP+ +V
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+EA + ++M G+ P + YT LI SFC +A + M++ G P++ TYNA+
Sbjct: 277 SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL 336
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I+ F + A+ +L +M E+ L D ++Y +I L A+ + M++
Sbjct: 337 IK--GFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQC--SSGNLDSAYRLLSLMEE 392
Query: 122 KGILPDSVT 130
G++P+ T
Sbjct: 393 SGLVPNQRT 401
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 38/361 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A V+E M G+ P YT L++ C+ A+++ +M D G+ + TYNA
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+++ G+ + +L+ + + ++GL +A +Y ++ A E +A ++ ++
Sbjct: 182 LVRGLCMLGS-LNQSLQFVERLMQKGLAPNAFTYSFLLEAAY--KERGTDEAVKLLDEII 238
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG P+ V+Y VL+ C GR +A LFRE+ + GF + +Y L+ C C G +
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK-GFKANVVSYNILLRCLCCDGRW 297
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG--L 238
+A L EM +PS+VTYN LI GR ++AL++ + M +
Sbjct: 298 EEANSLLAEMDGG--------DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYET-------------- 284
SY VI+ LCK + + EM +R NE TY
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRC--KPNEGTYNAIGSLCEHNSKVQEA 407
Query: 285 --LMEQLSDE------DTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
+++ LS++ D Y S+I +G+ A+QL Y M G+ D T S L+ G
Sbjct: 408 FYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRG 467
Query: 337 L 337
L
Sbjct: 468 L 468
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 178/456 (39%), Gaps = 77/456 (16%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
LE + G P+ T L++ C+ +R KA++V M+ G P
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIP-------------- 139
Query: 68 AGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
DA +Y +++ L +G A ++ + M+D G +
Sbjct: 140 ----------------------DASAYTYLVNQLC--KRGNVGYAMQLVEKMEDHGYPSN 175
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
+VTY L+ LC +G L+++ F E L + G +P+ TY L+ + +A L
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQ-FVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
E++ V G P+LV+YN L+ G+C GR +A+ +FR +P G + VSY
Sbjct: 235 DEII--------VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 248 VISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGD 307
++ LC +A L EMD S+ TY+ LIN G
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVV---------------TYNILINSLAFHGR 331
Query: 308 LEKAYQL--DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYI 365
E+A Q+ + G+ + + + ++ L K + L ++ RC P
Sbjct: 332 TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRC--KPNEG 389
Query: 366 IYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLE 425
Y+ + C +N V+ A ++ + Y +I R
Sbjct: 390 TYNAIGSLCEHNS-----------KVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 438
Query: 426 VHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRY 461
A+ + EM GF P + ALI+ L +G +
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 152/334 (45%), Gaps = 62/334 (18%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF----------- 51
EA ++L+E+ KG P+ +Y L+ FC+E R A+ +FRE+ +GF
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 52 ------------------------SPSLDTYNAVIQTNAFAGTGIEVALEILREMPERG- 86
+PS+ TYN +I + AF G E AL++L+EM +
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR-TEQALQVLKEMSKGNH 347
Query: 87 -LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD---KGILPDSVTYEVLIDNLC-WV 141
A SY VI L K GK + K +D+ + P+ TY I +LC
Sbjct: 348 QFRVTATSYNPVIARLC-----KEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHN 401
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
++ EAF + + + ++ + Y +++ C +G AF L +EM GF PD
Sbjct: 402 SKVQEAFYIIQSLSNKQKCCTHDF-YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD--- 457
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM-GLSPDTVSYRQVISGLCKIREPVK 260
TY+ALI G C G A+E+ M E P ++ +I GLCKIR
Sbjct: 458 -----AHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDL 512
Query: 261 AYEL-KLEMDKKRSCLSLNEDTYETLMEQLSDED 293
A E+ ++ ++KKR NE TY L+E ++ ED
Sbjct: 513 AMEVFEMMVEKKR---MPNETTYAILVEGIAHED 543
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 196/478 (41%), Gaps = 52/478 (10%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
E+M KG P R ++ +KA V+ MI+ G P++ T+N ++ + F
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS-CF 249
Query: 68 AGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
+E +I EM R + V+Y +I K+ +A DM G
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGF--SKNGKMEEARRFHGDMRRSGFAVT 307
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
++ LI+ C G +A+ + EML+ G P TY + C G A L
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLN-AGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
M +P +V+YN L++GY +G+ EA +F + + P V+Y
Sbjct: 367 SSMA------------APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 248 VISGLCKIREPVKAYELKLEMDK------------------KRSCLSLNEDTYETLMEQL 289
+I GLC+ A LK EM K LS+ + Y+ ++ +
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 290 SDED--TYSSLINDYLAQGDLEKAYQL-DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
D Y++ L GD +KA++L + ++ D + D +V ++GL K+ +A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGN 405
+ FR +P ++ Y T+I N +F K+A + ML
Sbjct: 535 IEF--QRKIFRVGLVPDHVTYTTVIRGYLENGQF------------KMARNLYDEMLRKR 580
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
P Y +LI+ H+++ + +A+ EM G P++ + AL+ + G +E
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 27/315 (8%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA + +++ + P TY LI C+ A ++ EM + P + TY +
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKK 117
++ F G + +A E+ EM +G+ D +Y E +LG KAF + +
Sbjct: 451 VK--GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG-----ELRLGDSDKAFRLHE 503
Query: 118 DM---DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+M D PD Y V ID LC VG L +A + F+ + R G PD TY ++ Y
Sbjct: 504 EMVATDHHA--PDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
G+F A +L+ EM+ K P S++TY LIYG+ GR+++A + M
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYP--------SVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
+ G+ P+ +++ ++ G+CK +AY +M+++ + N+ +Y L+ + D +
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE--GIPPNKYSYTMLISKNCDFEK 670
Query: 295 YSSLINDYLAQGDLE 309
+ ++ Y D E
Sbjct: 671 WEEVVKLYKEMLDKE 685
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 182/453 (40%), Gaps = 75/453 (16%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA +M G ++ LI +C++ A V EM++ G P+ TYN
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I G I+ A E+L M D VSY ++ + K+GK E D
Sbjct: 349 YICALCDFGR-IDDARELLSSMA----APDVVSYNTLMHGYI-----KMGKFVEASLLFD 398
Query: 121 D---KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
D I P VTY LID LC G L A L EM + F PD TY L+ +
Sbjct: 399 DLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKN 457
Query: 178 GEFSKAFHLHHEMVHKGFLPD---FVTG-------------------------FSPSLVT 209
G S A ++ EM+ KG PD + T +P L
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
YN I G C +G + +A+E R + +GL PD V+Y VI G + + A L EM
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 270 KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
+KR Y +++ TY LI + G LE+A+Q M G + +T
Sbjct: 578 RKR--------LYPSVI-------TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 330 LSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLI--ENCSNNEFKRLVGPAI 387
+ LL G+ K EA YL G+P T++ +NC +++ +V
Sbjct: 623 HNALLYGMCKAGNIDEAYRYL---CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV---- 675
Query: 388 TFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH 420
K + ML +PDG + L F H
Sbjct: 676 --------KLYKEMLDKEIEPDGYTHRAL-FKH 699
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A + +EM K L P TY LI+ + R +A + EM RG P++ T+NA++
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKKDMD 120
AG I+ A L +M E G+ + SY +I C EK + ++ K+M
Sbjct: 629 GMCKAGN-IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDF-----EKWEEVVKLYKEML 682
Query: 121 DKGILPDSVTYEVLIDNL 138
DK I PD T+ L +L
Sbjct: 683 DKEIEPDGYTHRALFKHL 700
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 213/482 (44%), Gaps = 47/482 (9%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++ E++L+EM G+ P+ YT I C++++ +A K+F M G P+L TY+A+
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I + + TG + A + +E+ L + V + ++ E L A + M
Sbjct: 276 I--DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE--LVTARSLFVHMV 331
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ P+ Y LI C G + EA L EM SPD TY L+N C++ +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILINGLCIEDQV 390
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
++A L +M ++ PS TYN+LI+GYC +++AL++ M G+ P
Sbjct: 391 AEANRLFQKMKNERIF--------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ +++ +I G C +R+ A L EM T+ + D TY++LI+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEM---------------TIKGIVPDVVTYTALID 487
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA-KWYLLWTVFFRCF 359
+ + ++++A +L M G ++ T + L++G K R + A +Y C+
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 360 GMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIF 418
++ + LIE C N R A + M PD Y ++
Sbjct: 548 N---HVGFTCLIEGLCQNGYILR------------ASRFFSDMRSCGITPDICSYVSMLK 592
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
H + + + +M+ G +P++ V L+ + Y + + + N+ R +S
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLL-VNQLLARFYQANGYVKSACFLTNSSRLKTVS 651
Query: 479 DS 480
+S
Sbjct: 652 NS 653
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 198/474 (41%), Gaps = 41/474 (8%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
EE L +P + +++ + R ++ MI RG P + Y + Q
Sbjct: 149 EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC 208
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
F ++L EM G+ + Y + I L L + K+ +A +M + M G+
Sbjct: 209 -CFKQGLYSKKEKLLDEMTSLGIKPNV--YIYTIYILDLCRDNKMEEAEKMFELMKKHGV 265
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
LP+ TY +ID C G + +A+ L++E+L P+ + L++ +C E A
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL-VAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
L MV G P+L YN LI+G+C G + EA+ + M + LSPD +
Sbjct: 325 SLFVHMVK--------FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
Y +I+GLC + +A L +M +R TY+SLI+ Y
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERI---------------FPSSATYNSLIHGYCK 421
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
+ ++E+A L M G + +T S L++G + R +A L + + + +P
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV-RDIKAAMGLYFEMTIKGI-VPDV 479
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
+ Y LI+ FK ++K A++ + ML P+ + L+ +
Sbjct: 480 VTYTALID----AHFKEA-------NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
+ A + Y E + LI+ L +G Y + + +RSC ++
Sbjct: 529 RLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG-YILRASRFFSDMRSCGIT 581
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 49/324 (15%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFRE--------------- 45
M EAE++ E M G+ P+ TY+ +I +C+ +A +++E
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 46 --------------------MIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
M+ G P+L YN +I + +G +E A+ +L EM
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLE-AVGLLSEMESL 368
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
L+ D +Y +I L + E+++ +A + + M ++ I P S TY LI C +
Sbjct: 369 NLSPDVFTYTILINGLCI--EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
+A DL EM G P+ T+ L++ YC + A L+ EM KG +PD
Sbjct: 427 QALDLCSEMT-ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD------- 478
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+VTY ALI + ++EAL ++ M E G+ P+ ++ ++ G K A +
Sbjct: 479 -VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 266 LEMDKKRSCLSLNEDTYETLMEQL 289
E +++RSC N + L+E L
Sbjct: 538 QENNQQRSC--WNHVGFTCLIEGL 559
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 18/273 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA +L EM L+P TYT LI+ C E + ++A ++F++M + PS TYN+
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKK 117
+I +E AL++ EM G+ + +++ +I C + + A +
Sbjct: 415 LIHGYC-KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV-----RDIKAAMGLYF 468
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M KGI+PD VTY LID + EA L+ +ML G P++HT+ L++ + +
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE-AGIHPNDHTFACLVDGFWKE 527
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
G S A + E + + V GF+ LI G C G + A F M G
Sbjct: 528 GRLSVAIDFYQENNQQRSCWNHV-GFT-------CLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDK 270
++PD SY ++ G + + L+ +M K
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)
Query: 24 TCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMP 83
T ++ C++ A +F EM ++G P++ TYN +I + +G + A ++LR M
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD-ADQLLRHMI 72
Query: 84 ERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
E+ + D V++ +I A + E K+ +A E+ K+M I P ++TY +ID C R
Sbjct: 73 EKQINPDIVTFSALINAFV--KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
+ +A + M +G SPD T+ L+N YC + EM +G + +
Sbjct: 131 VDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN----- 184
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
VTY LI+G+C +G + A ++ M G++PD +++ +++GLC +E KA+
Sbjct: 185 ---TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 264 LKLEMDK 270
+ ++ K
Sbjct: 242 ILEDLQK 248
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 14/233 (6%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A+ + EM+ KG+ P+ TY C+I SFC R S A ++ R MI++ +P + T++A+I
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI- 87
Query: 64 TNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
NAF + A EI +EM + ++Y +I ++++ A M M K
Sbjct: 88 -NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC--KQDRVDDAKRMLDSMASK 144
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD VT+ LI+ C R+ ++F EM HR G + TY L++ +C G+
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM-HRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
A L +EM+ G PD+ +T++ ++ G CS +++A I + +
Sbjct: 204 AQDLLNEMISCGVAPDY--------ITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 24/220 (10%)
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M +KGI P+ +TY +ID+ C GR S+A L R M+ + +PD T+ L+N + +
Sbjct: 35 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ-INPDIVTFSALINAFVKE 93
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
+ S+A ++ EM+ P + +TYN++I G+C RV +A + M G
Sbjct: 94 RKVSEAEEIYKEMLRWSIFP--------TTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSS 297
SPD V++ +I+G CK + E+ EM ++ +++ TY++
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI---------------VANTVTYTT 190
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
LI+ + GDL+ A L M G D +T +L GL
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 27/264 (10%)
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M I D V ++D LC G A +LF EM H G P+ TY +++ +C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEM-HEKGIFPNVLTYNCMIDSFCHSG 59
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+S A L M+ K PD +VT++ALI + +V EA EI++ M +
Sbjct: 60 RWSDADQLLRHMIEKQINPD--------IVTFSALINAFVKERKVSEAEEIYKEMLRWSI 111
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
P T++Y +I G CK ++ V + L+ + C D T+S+L
Sbjct: 112 FPTTITYNSMIDGFCK-QDRVDDAKRMLDSMASKGCSP--------------DVVTFSTL 156
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC 358
IN Y ++ ++ M G +++ VT + L++G ++ A+ L C
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL--NEMISC 214
Query: 359 FGMPAYIIYDTLIEN-CSNNEFKR 381
P YI + ++ CS E ++
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRK 238
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A+++L M K + P T++ LI++F +E + S+A ++++EM+ P+ TYN++
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I + F ++ A +L M +G + D V++ +I +++ E+ +M
Sbjct: 122 I--DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC--KAKRVDNGMEIFCEMH 177
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+GI+ ++VTY LI C VG L A DL EM+ G +PD T+ ++ C + E
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFHCMLAGLCSKKEL 236
Query: 181 SKAFHL 186
KAF +
Sbjct: 237 RKAFAI 242
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EAEE+ +EM + P TY +I FC++ R A ++ M +G SP + T++
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I A ++ +EI EM RG+ A+ V+Y +I + L A ++ +M
Sbjct: 156 LINGYCKAKR-VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD--LDAAQDLLNEMI 212
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREM 154
G+ PD +T+ ++ LC L +AF + ++
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 10/252 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A LE M G+ P+ TY C+I +C R +A+++ +M +G P +Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ +EV + + E GL D V+Y +I +L + +A KD
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI--HMLTKHDHADEALWFLKDAQ 410
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+KG D + Y ++ LC GR+SEA DL EML +G PD TY ++N +C GE
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV 470
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
KA L M G P+ V+Y AL+ G C G+ EA E+ E SP
Sbjct: 471 DKAKKLLQVM--------HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 522
Query: 241 DTVSYRQVISGL 252
++++Y ++ GL
Sbjct: 523 NSITYSVIMHGL 534
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 197/479 (41%), Gaps = 80/479 (16%)
Query: 29 SFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLT 88
CQ SR +V M RG + + ++ V+ + + AG + AL++L M G+
Sbjct: 221 KLCQGSR-----RVLVLMKRRGIYRTPEAFSRVMVSYSRAGQ-LRDALKVLTLMQRAGVE 274
Query: 89 ADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
+ + C+ + + +L KA + M GI+P+ VTY +I C + R+ EA
Sbjct: 275 PNLL-ICNTTIDVFVRAN-RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLV 208
+L +M H G PD+ +Y+ +M C + + L +M + G P V
Sbjct: 333 ELLEDM-HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE-------HGLVPDQV 384
Query: 209 TYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
TYN LI+ EAL + E G D + Y ++ LCK +A +L EM
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 269 DKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
K C D TY++++N + G+++KA +L VM G+ + V
Sbjct: 445 LSKGHC--------------PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490
Query: 329 TLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAIT 388
+ + LLNG+ + ++ EA+ + N S +
Sbjct: 491 SYTALLNGMCRTGKSLEAREMM----------------------NMSEEHW--------- 519
Query: 389 FSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSV 448
+ P+ Y++++ R ++ +A ++ EMV GF P +
Sbjct: 520 -----------------WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562
Query: 449 LALIKALHYDGRYNEMSWVIHNTL-RSCNLSDSELLKVLNEIDFSKPEMTALLDVLSEI 506
L+++L DGR +E + L + C ++ V++ E+ A L VL ++
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF-CQNDELDAALSVLDDM 620
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 166/364 (45%), Gaps = 47/364 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF-SPSLDTYNAV 61
EA L++ KG + Y+ ++H+ C+E R S+A + EM+ +G P + TY AV
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ N F G ++ A ++L+ M G + VSY ++ + + GK+ E ++ M+
Sbjct: 461 V--NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC-----RTGKSLEAREMMN 513
Query: 121 ---DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+ P+S+TY V++ L G+LSEA D+ REM+ +G F P L+ C
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG-FFPGPVEINLLLQSLCRD 572
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVT------GFSPS--------------LVTYNALIYGY 217
G +A E ++KG + V GF + L+ +A ++ Y
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 218 CSL-------GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK 270
+L GR+ EA E+ + M G+ P V+YR VI C++ + + +M
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 271 KRSCLSLNEDTYETL--MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
++ C ++ E L + +L + DT + ++ D + Y L +GYL V
Sbjct: 693 RQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYAL-----MEGYLKKGV 747
Query: 329 TLSV 332
LS
Sbjct: 748 PLSA 751
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 14/266 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E++ +P+ TY+ ++H +E + S+A V REM+ +GF P N ++
Sbjct: 507 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 566
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
Q+ G E A + + E +G + V++ VI ++L A + DM
Sbjct: 567 QSLCRDGRTHE-ARKFMEECLNKGCAINVVNFTTVIHGFC--QNDELDAALSVLDDMYLI 623
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
D TY L+D L GR++EA +L ++MLH+ G P TY +++ YC G+
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK-GIDPTPVTYRTVIHRYCQMGKVDD 682
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ +M+ + YN +I C LG+++EA + + D
Sbjct: 683 LVAILEKMISR----------QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDA 732
Query: 243 VSYRQVISGLCKIREPVKAYELKLEM 268
+ ++ G K P+ AY++ M
Sbjct: 733 KTCYALMEGYLKKGVPLSAYKVACRM 758
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA E++++M HKG+ P TY +IH +CQ + V + +MI R ++ YN
Sbjct: 645 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQ 702
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
VI+ G +E A +L ++ +DA + C+ + L L A+++ M
Sbjct: 703 VIEKLCVLGK-LEEADTLLGKVLRTASRSDAKT-CYALMEGYLKKGVPLS-AYKVACRMF 759
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP 162
++ ++PD E L L G++ EA L ++ RG SP
Sbjct: 760 NRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 159/350 (45%), Gaps = 31/350 (8%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A EVL+EM GL P E + CL+ + C+ +A KVF +M ++ F P+L + +
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTS 241
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G +E A E+L +M E GL D V + +++ K+ A+++ DM
Sbjct: 242 LLYGWCREGKLME-AKEVLVQMKEAGLEPDIVVFTNLLSG--YAHAGKMADAYDLMNDMR 298
Query: 121 DKGILPDSVTYEVLIDNLCWV-GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+G P+ Y VLI LC R+ EA +F EM R G D TY L++ +C G
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM-ERYGCEADIVTYTALISGFCKWGM 357
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
K + + +M KG + PS VTY ++ + + +E LE+ M G
Sbjct: 358 IDKGYSVLDDMRKKGVM--------PSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
PD + Y VI CK+ E +A L EM+ + DT+ +I
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGV---------------DTFVIMI 454
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNV--TLSVLLNGLNKIARTTEAK 347
N + +QG L +A M G S TL LLN L + + AK
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAK 504
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 140/347 (40%), Gaps = 58/347 (16%)
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALL----------------- 102
V+ FA ++ A+E+L EMP+ GL D + ++ AL
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 230
Query: 103 -LPP--------------EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEA 147
PP E KL +A E+ M + G+ PD V + L+ G++++A
Sbjct: 231 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 148 FDLFREMLHRGGFSPDEHTYFNLMNCYC-LQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
+DL +M R GF P+ + Y L+ C + +A + EM G D
Sbjct: 291 YDLMNDMRKR-GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD-------- 341
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
+VTY ALI G+C G + + + M + G+ P V+Y Q++ K + + EL +
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL-I 400
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
E K+R C D Y+ +I G++++A +L M +G
Sbjct: 401 EKMKRRGC--------------HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN 373
T +++NG EA + V F P Y +L+ N
Sbjct: 447 VDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNN 493
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 155/380 (40%), Gaps = 57/380 (15%)
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM 190
+ VL+ + +A ++ EM + G PDE+ + L++ C G +A + +M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEM-PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
K F P+L + +L+YG+C G++ EA E+ M E GL PD V + ++S
Sbjct: 229 REK---------FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279
Query: 251 GLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL--------------------- 289
G + AY+L +M K+ N + Y L++ L
Sbjct: 280 GYAHAGKMADAYDLMNDMRKR--GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 290 --SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
+D TY++LI+ + G ++K Y + M G + VT ++ K + E
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC- 396
Query: 348 WYLLWTVFFRCFGMPAYIIYDTLIE-NCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNY 406
L R P +IY+ +I C E VK A++ + M
Sbjct: 397 -LELIEKMKRRGCHPDLLIYNVVIRLACKLGE------------VKEAVRLWNEMEANGL 443
Query: 407 KPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF--VPHMFSVLALIKALHYDGRYNEM 464
P + ++I + + +A N + EMV G P ++ +L+ L D + EM
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL-EM 502
Query: 465 S---W-VIHNTLRSCNLSDS 480
+ W I N SC L+ S
Sbjct: 503 AKDVWSCISNKTSSCELNVS 522
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 16/268 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA V EM G TYT LI FC+ K V +M +G PS TY
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKK 117
++ + E LE++ +M RG D + Y VI C L ++ +A +
Sbjct: 383 IMVAHE-KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL-----GEVKEAVRLWN 436
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFS-PDEHTYFNLMNCYCL 176
+M+ G+ P T+ ++I+ G L EA + F+EM+ RG FS P T +L+N
Sbjct: 437 EMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVR 496
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+ A + + +K + ++ + I+ + G V+EA M EM
Sbjct: 497 DDKLEMAKDVWSCISNK------TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEM 550
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYEL 264
L P +Y +++ GL K+ A E+
Sbjct: 551 DLMPQPNTYAKLMKGLNKLYNRTIAAEI 578
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 208/502 (41%), Gaps = 64/502 (12%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
++M G P TY LIH C++ +A+++ ++M G P++ TY +I
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 68 AGTGIEVALEILREMPERGLTADAVSYCHVICALL--LPPEEKLGKAFE-----MKKDMD 120
AG ++ AL+ L M R L + + + + LPP KAFE M+KD +
Sbjct: 263 AGR-VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP----CKAFEVLVGFMEKDSN 317
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ + D+V Y + +++ E R++ RG + PD T+ M+C +
Sbjct: 318 LQRVGYDAVLYCLSNNSMA-----KETGQFLRKIGERG-YIPDSSTFNAAMSCLLKGHDL 371
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+ + V +G P GF+ LV AL+ + R E + M GL
Sbjct: 372 VETCRIFDGFVSRGVKP----GFNGYLVLVQALL----NAQRFSEGDRYLKQMGVDGLLS 423
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
SY VI LCK R A EM + +L T+++ ++
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV---------------TFNTFLS 468
Query: 301 DYLAQGDLEKAYQ-LDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA----KWYLLWTVF 355
Y +GD++K + L+ ++ H G+ D +T S+++N L + +A K L W +
Sbjct: 469 GYSVRGDVKKVHGVLEKLLVH-GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI- 526
Query: 356 FRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNL 415
P I Y+ LI +C + T ++K M PD YN
Sbjct: 527 -----EPNEITYNILIRSCCS-----------TGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSC 475
I + +V KA + M+ G P F+ LIKAL GR +E + + R
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 476 NLSDSELLKVLNEIDFSKPEMT 497
+ DS +++ E+D K ++
Sbjct: 631 CVPDSYTKRLVEELDLRKSGLS 652
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 14/289 (4%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E + L ++ +G P T+ + + + ++F + RG P + Y ++
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
Q A E L++M GL + SY VI L ++ A +M D+
Sbjct: 398 QALLNAQRFSE-GDRYLKQMGVDGLLSSVYSYNAVIDCLC--KARRIENAAMFLTEMQDR 454
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI P+ VT+ + G + + + ++L G F PD T+ ++NC C E
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG-FKPDVITFSLIINCLCRAKEIKD 513
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
AF EM+ G P+ +TYN LI CS G ++++F M E GLSPD
Sbjct: 514 AFDCFKEMLE--------WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD 291
+Y I CK+R+ KA EL M R L + TY TL++ LS+
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTM--LRIGLKPDNFTYSTLIKALSE 612
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E + + +G+ P Y L+ + R S+ + ++M G S+ +YNA
Sbjct: 371 LVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNA 430
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
VI A IE A L EM +RG++ + V++ + + + K K + + +
Sbjct: 431 VIDCLCKARR-IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK--KVHGVLEKLL 487
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G PD +T+ ++I+ LC + +AFD F+EML G P+E TY L+ C G+
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE-WGIEPNEITYNILIRSCCSTGDT 546
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
++ L +M G SP L YNA I +C + +V++A E+ + M +GL P
Sbjct: 547 DRSVKLFAKMKE--------NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598
Query: 241 DTVSYRQVISGLCKIREPVKAYEL 264
D +Y +I L + +A E+
Sbjct: 599 DNFTYSTLIKALSESGRESEAREM 622
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 162/380 (42%), Gaps = 63/380 (16%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ P + Y +ID L L A+ F++M G PD TY L++ C +G +
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQM-RSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L +M +G P++ TY LI G+ GRV EAL+ M L+P+
Sbjct: 234 AIRLVKQMEQEGN--------RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRS------------CLSLNEDTYET------ 284
+ R + G+ + P KA+E+ + +K S CLS N ET
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 285 LMEQ--LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLS-----VLLNGL 337
+ E+ + D T+++ ++ L DL + ++ DG++S V VL+ L
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRI-----FDGFVSRGVKPGFNGYLVLVQAL 400
Query: 338 NKIARTTEAKWYL-------LWTVFFRCFGMPAYIIYDTLIENCS---NNEFKRLVGPAI 387
R +E YL L + + + + IEN + R + P +
Sbjct: 401 LNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNL 460
Query: 388 T--------FSVKVAIKAHHTML-----HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYM 434
+SV+ +K H +L HG +KPD ++L+I R+ E+ A++ +
Sbjct: 461 VTFNTFLSGYSVRGDVKKVHGVLEKLLVHG-FKPDVITFSLIINCLCRAKEIKDAFDCFK 519
Query: 435 EMVHYGFVPHMFSVLALIKA 454
EM+ +G P+ + LI++
Sbjct: 520 EMLEWGIEPNEITYNILIRS 539
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 151/313 (48%), Gaps = 24/313 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +VL+E+ GL P+ TYT ++ + A +V EM+DRG+ P TY ++
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G E A ++ +M + + + V+Y +I AL E+K G+A M +M ++
Sbjct: 270 GYCKLGRFSEAA-TVMDDMEKNEIEPNEVTYGVMIRALC--KEKKSGEARNMFDEMLERS 326
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+PDS +ID LC ++ EA L+R+ML + PD L++ C +G ++A
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKML-KNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L E F G PSL+TYN LI G C G + EA ++ M E P+
Sbjct: 386 RKLFDE---------FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 244 SYRQVISGLCK---IREPVKAYELKLEMDKKRSCLSLNEDTYETLME---QLSDEDTYSS 297
+Y +I GL K ++E V+ E LE+ C N+ T+ L E +L E+
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEI----GCFP-NKTTFLILFEGLQKLGKEEDAMK 491
Query: 298 LINDYLAQGDLEK 310
+++ + G ++K
Sbjct: 492 IVSMAVMNGKVDK 504
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 116/255 (45%), Gaps = 13/255 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A+ VLEEM +G P TYT L+ +C+ R S+A V +M P+ TY
Sbjct: 242 MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I+ E A + EM ER D+ C VI AL + K+ +A + + M
Sbjct: 302 MIRALCKEKKSGE-ARNMFDEMLERSFMPDSSLCCKVIDALC--EDHKVDEACGLWRKML 358
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+PD+ LI LC GR++EA LF E G P TY L+ C +GE
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF--EKGSIPSLLTYNTLIAGMCEKGEL 416
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
++A L +M + P+ TYN LI G G V+E + + M E+G P
Sbjct: 417 TEAGRLWDDMYER--------KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
Query: 241 DTVSYRQVISGLCKI 255
+ ++ + GL K+
Sbjct: 469 NKTTFLILFEGLQKL 483
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 187/456 (41%), Gaps = 54/456 (11%)
Query: 13 HKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSP---SLDTYNAVIQTNAFAG 69
H G T + TY ++ + +RA V+ + + P + + +++ AG
Sbjct: 76 HPGFTHNYDTYHSILFKLSR-ARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAG 134
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
E ++ I +P+ G+ S ++ L+ L A K + GI P+
Sbjct: 135 R-YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM-FKNSKESFGITPNIF 192
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
T +L+ LC + A+ + E + G P+ TY ++ Y +G+ A + E
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDE-IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M+ +G+ PD TY L+ GYC LGR EA + M + + P+ V+Y +I
Sbjct: 252 MLDRGWYPD--------ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSLINDYLAQGD 307
LCK ++ +A + ++ ++E+ + D +I+
Sbjct: 304 RALCKEKKSGEA-----------------RNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 308 LEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF--FRCFGMPAYI 365
+++A L M + + DN LS L++ L K R TEA+ +F F +P+ +
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR-----KLFDEFEKGSIPSLL 401
Query: 366 IYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
Y+TLI C E A + M KP+ YN+LI S++
Sbjct: 402 TYNTLIAGMCEKGELTE------------AGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
V + + EM+ G P+ + L L + L G+
Sbjct: 450 NVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 173/398 (43%), Gaps = 69/398 (17%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQES---RASKAV------------------- 40
EA + L EM G+ P +Y LI FC+ RA V
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYY 238
Query: 41 ------KVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSY 94
+ +R+M+ GF P + T++++I G +E L +LREM E + + V+Y
Sbjct: 239 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-LLREMEEMSVYPNHVTY 297
Query: 95 CHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREM 154
++ +L + A + M +GI D V Y VL+D L G L EA F+ M
Sbjct: 298 TTLVDSLFKANIYR--HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK-M 354
Query: 155 LHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALI 214
L P+ TY L++ C G+ S A + +M+ K +P+ +VTY+++I
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN--------VVTYSSMI 406
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSC 274
GY G ++EA+ + R M + + P+ +Y VI GL K + E+ +E+ K+
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE----EMAIELSKEMRL 462
Query: 275 LSLNEDTY--ETLMEQLS----------------------DEDTYSSLINDYLAQGDLEK 310
+ + E+ Y + L+ L D+ Y+SLI+ + GD E
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 311 AYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKW 348
A M G D V+ +VL++G+ K + A W
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADW 559
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 211/508 (41%), Gaps = 67/508 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAE+ + + P+ TYT L+ C+ S A + +M+++ P++ TY++
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N + G +E A+ +LR+M ++ + + +Y VI L +E++ A E+ K+M
Sbjct: 405 MI--NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM--AIELSKEM 460
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G+ ++ + L+++L +GR+ E L ++M+ + G + D+ Y +L++ + G+
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK-GVTLDQINYTSLIDVFFKGGD 519
Query: 180 FSKAFHLHHEMVHKGFLPDFVT--------------------------GFSPSLVTYNAL 213
A EM +G D V+ G P + T+N +
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIM 579
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC---KIREPV----------- 259
+ G + L+++ M G+ P +S V+ LC K+ E +
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 260 ----KAYELKLEMDKKRSCLSLNEDTYETLME---QLSDEDTYSSLINDYLAQGDLEKAY 312
Y + L+ K T+ETL+ +LS + Y++LI G +KA
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ-VYNTLIATLCKLGMTKKAA 698
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIE 372
+ M G++ D VT + L++G + K ++V P Y+T+I
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGY--FVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 373 NCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNM 432
S+ +K K M +PD YN LI ++ + + +
Sbjct: 757 GLSDAGL-----------IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 433 YMEMVHYGFVPHMFSVLALIKALHYDGR 460
Y EM+ G VP + LI G+
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGK 833
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 12/255 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA +L +M + P+ TY + + + RA K ++ G S YN
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I T G + A+ ++ +M RG D V++ ++ + + KA M
Sbjct: 684 LIATLCKLGMTKKAAM-VMGDMEARGFIPDTVTFNSLMHGYFVGSHVR--KALSTYSVMM 740
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ GI P+ TY +I L G + E EM RG PD+ TY L++ G
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG-MRPDDFTYNALISGQAKIGNM 799
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+ ++ EM+ G +P TYN LI + ++G++ +A E+ + M + G+SP
Sbjct: 800 KGSMTIYCEMIADGLVP--------KTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 241 DTVSYRQVISGLCKI 255
+T +Y +ISGLCK+
Sbjct: 852 NTSTYCTMISGLCKL 866
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 193/497 (38%), Gaps = 88/497 (17%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY +I C+ A +A + EM+ G P +YN +I + F G V + L
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI--DGFCKVGNFVRAKAL-- 218
Query: 82 MPERGLTADAVSYCHVIC-ALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
D +S ++I +LL L E +DM G PD VT+ +I+ LC
Sbjct: 219 -------VDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
G++ E L REM + P+ TY L++ + A L+ +MV +G D
Sbjct: 272 GGKVLEGGLLLREMEEMSVY-PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD-- 328
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
LV Y L+ G G ++EA + F+ + E P+ V+Y ++ GLCK +
Sbjct: 329 ------LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 261 AYELKLEMDKKRSCLSLNEDTYE----------------TLMEQLSDED------TYSSL 298
A + +M +K + N TY +L+ ++ D++ TY ++
Sbjct: 383 AEFIITQMLEK--SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTV 440
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL-------- 350
I+ G E A +L M G +N L L+N L +I R E K +
Sbjct: 441 IDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
Query: 351 ---------LWTVFFRC---------------FGMPAYIIYDTLIENCSNNEFKRLVGPA 386
L VFF+ GMP ++ + L+
Sbjct: 501 TLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVV-----------SYNVLISGM 549
Query: 387 ITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMF 446
+ F A A+ M +PD +N+++ + + ++ +M G P +
Sbjct: 550 LKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 609
Query: 447 SVLALIKALHYDGRYNE 463
S ++ L +G+ E
Sbjct: 610 SCNIVVGMLCENGKMEE 626
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 159/377 (42%), Gaps = 39/377 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A+ + M KG+ P T+ +++S ++ + +K++ +M G PSL + N V+
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKA---FEMKKDMD 120
G +E A+ IL +M + + +Y + L K +A F+ + +
Sbjct: 617 MLCENGK-MEEAIHILNQMMLMEIHPNLTTY-----RIFLDTSSKHKRADAIFKTHETLL 670
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
GI Y LI LC +G +A + +M RG F PD T+ +LM+ Y +
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG-FIPDTVTFNSLMHGYFVGSHV 729
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
KA + M+ G P+ T G P TYNAL
Sbjct: 730 RKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 789
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I G +G ++ ++ I+ M GL P T +Y +IS + + ++A EL EM K+
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR-- 847
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
+S N TY T++ L T+ + + A E L ++ GY+ N T+ +
Sbjct: 848 GVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWI 907
Query: 334 LNGLNKIARTTEAKWYL 350
+K +A+ +L
Sbjct: 908 SAAFSKPGMKVDAERFL 924
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 157/383 (40%), Gaps = 51/383 (13%)
Query: 92 VSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLF 151
VS H + L L E G A + M G++PDS + LI G + + L
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSA-MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLI 116
Query: 152 REMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYN 211
+ G SPD L++ +C G S A L V S VTYN
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-----------ISIDTVTYN 165
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
+I G C G EA + M +MG+ PDTVSY +I G CK+ V+A
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA---------- 215
Query: 272 RSCLSLNEDTYETLMEQLSDED--TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
+ L++++S+ + T++ L++ Y +E+AY+ D VM G+ D VT
Sbjct: 216 -----------KALVDEISELNLITHTILLSSYYNLHAIEEAYR-DMVM--SGFDPDVVT 261
Query: 330 LSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITF 389
S ++N L K + E L + P ++ Y TL+++ R
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVY--PNHVTYTTLVDSLFKANIYRH------- 312
Query: 390 SVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVL 449
A+ + M+ D VY +L+ ++ ++ +A + ++ VP++ +
Sbjct: 313 ----ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 450 ALIKALHYDGRYNEMSWVIHNTL 472
AL+ L G + ++I L
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQML 391
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 200/487 (41%), Gaps = 58/487 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E+ EM KG+ P YT LI C + + S A + EM G +P + YN +
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
A G E A E L+ M RG+ V++ VI L+ E L KA + ++ K
Sbjct: 474 GGLATNGLAQE-AFETLKMMENRGVKPTYVTHNMVIEGLIDAGE--LDKAEAFYESLEHK 530
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF-S 181
D+ ++ C G L AF+ F R F + YF L C + ++ S
Sbjct: 531 SRENDAS----MVKGFCAAGCLDHAFERF----IRLEFPLPKSVYFTLFTSLCAEKDYIS 582
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
KA L M + G P Y LI +C + V++A E F + + PD
Sbjct: 583 KAQDLLDRM--------WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM--------------- 286
+Y +I+ C++ EP +AY L +M KR + + TY L+
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDM--KRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ + D Y+ +IN Y DL+K Y L M + D VT +VLL + + E
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREM 752
Query: 347 K--------WYLLWTVFFRC----FGMPAYIIYDTLIENCSNNE---FKRLVGPAITFS- 390
K +Y + ++C G A I+D +IE+ + + + L+
Sbjct: 753 KAFDVKPDVFYYTVLIDWQCKIGDLG-EAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 391 VKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
+K A M+ KPD Y LI R+ V KA + EM+ G P S
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS--- 868
Query: 451 LIKALHY 457
+ A+HY
Sbjct: 869 -LSAVHY 874
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 126/548 (22%), Positives = 210/548 (38%), Gaps = 103/548 (18%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR----------- 49
+ +AE V+ +M G+ P Y+ +I + KAV VF +M+ +
Sbjct: 307 IEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSS 366
Query: 50 ---------GFSPSLDTYNAVIQTN----------AFAGTG----IEVALEILREMPERG 86
FS + D + +TN AF G +E A+E+ REM +G
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 87 LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSE 146
+ D ++Y +I L + K AF++ +MD G PD V Y VL L G E
Sbjct: 427 IAPDVINYTTLIGGCCL--QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQE 484
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD--FVTGFS 204
AF+ + M +R G P T+ ++ GE KA + + HK D V GF
Sbjct: 485 AFETLKMMENR-GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFC 543
Query: 205 PS------------------LVTYNALIYGYCS-LGRVQEALEIFRGMPEMGLSPDTVSY 245
+ Y L C+ + +A ++ M ++G+ P+ Y
Sbjct: 544 AAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMY 603
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSLINDYL 303
++I C++ KA E +E L+ + + D TY+ +IN Y
Sbjct: 604 GKLIGAWCRVNNVRKAREF-----------------FEILVTKKIVPDLFTYTIMINTYC 646
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
+ ++AY L M D VT SVLLN ++ E + + + +P
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV---------IPD 697
Query: 364 YIIYDTLIEN-CSNNEFKR------------LVGPAITFSVKVAIKAHHT----MLHGNY 406
+ Y +I C N+ K+ +V +T++V + K M +
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDV 757
Query: 407 KPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSW 466
KPD Y +LI + ++ +A ++ +M+ G P ALI G E
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 467 VIHNTLRS 474
+ + S
Sbjct: 818 IFDRMIES 825
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 209/493 (42%), Gaps = 82/493 (16%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+ ++M +G +P+ T++ LI F + KA++ +++M G +PS+ + +IQ
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ-GW 419
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
G E AL++ E E GL V C+ I + L + K +A E+ M+ +GI P
Sbjct: 420 LKGQKHEEALKLFDESFETGLAN--VFVCNTILSWLCK-QGKTDEATELLSKMESRGIGP 476
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYF------------------ 168
+ V+Y ++ C + A +F +L +G P+ +TY
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKG-LKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 169 -----------------NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYN 211
++N C G+ SKA L M+ + L S ++YN
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL-------CVSCMSYN 588
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
++I G+ G + A+ + M G+SP+ ++Y +++GLCK +A E++ EM K
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 272 RS--------------CLSLNEDTYETLMEQLSDED------TYSSLINDYLAQGDLEKA 311
C N ++ L +L +E Y+SLI+ + G++ A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 312 YQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLI 371
L M DG D T + L++GL K A L+T +P IIY ++
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE--LYTEMQAVGLVPDEIIYTVIV 766
Query: 372 ENCSNN-EFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAY 430
S +F VKV +K M N P+ +YN +I H R + +A+
Sbjct: 767 NGLSKKGQF-----------VKV-VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 431 NMYMEMVHYGFVP 443
++ EM+ G +P
Sbjct: 815 RLHDEMLDKGILP 827
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A EEM G++P+ TYT L++ C+ +R +A+++ EM ++G + Y A
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 61 VIQTNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMK 116
+I + F + +E A + E+ E GL Y +I LG A ++
Sbjct: 660 LI--DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF-----RNLGNMVAALDLY 712
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
K M G+ D TY LID L G L A +L+ EM G PDE Y ++N
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM-QAVGLVPDEIIYTVIVNGLSK 771
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+G+F K + EM +P+++ YNA+I G+ G + EA + M +
Sbjct: 772 KGQFVKVVKMFEEMKK--------NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYEL 264
G+ PD ++ ++SG +PV+A L
Sbjct: 824 GILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 209/543 (38%), Gaps = 100/543 (18%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFS-PSLDTYNA 60
EA EVL +G P Y+ + + C+ + A + REM ++ PS +TY +
Sbjct: 250 AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTS 309
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
VI + G ++ A+ + EM G++ + V+ +I L A + M+
Sbjct: 310 VILASVKQGN-MDDAIRLKDEMLSDGISMNVVAATSLITGHC--KNNDLVSALVLFDKME 366
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP------------------ 162
+G P+SVT+ VLI+ G + +A + +++M G +P
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 163 -------DEHTYFNLMNCY---------CLQGEFSKAFHLHHEMVHKGFLPDFVT----- 201
DE L N + C QG+ +A L +M +G P+ V+
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 202 ----------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
G P+ TY+ LI G Q ALE+ M +
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEM-DKKR---SCLSLNE-----------DTYET 284
+ V Y+ +I+GLCK+ + KA EL M ++KR SC+S N D+
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 285 LMEQLSDED------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
E++ TY+SL+N +++A ++ M + G D L++G
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 339 KIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAH 398
K R+ L++ P+ IY++LI N +G + A+ +
Sbjct: 666 K--RSNMESASALFSELLEEGLNPSQPIYNSLISGFRN------LGNMVA-----ALDLY 712
Query: 399 HTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYD 458
ML + D Y LI + + A +Y EM G VP ++ L
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 459 GRY 461
G++
Sbjct: 773 GQF 775
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 189/452 (41%), Gaps = 61/452 (13%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLD----TYNAVIQTNAFAGT 70
G + R + L++++ ++ + AV + +M++ P T +A++Q N+
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTE- 216
Query: 71 GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVT 130
A E+ M G+ D V+ ++ A L EEK +A E+ ++G PDS+
Sbjct: 217 ----AKELYSRMVAIGVDGDNVTTQLLMRASL--REEKPAEALEVLSRAIERGAEPDSLL 270
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM 190
Y + + C L+ A L REM + P + TY +++ QG A L EM
Sbjct: 271 YSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEM 330
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
+ G S ++V +LI G+C + AL +F M + G SP++V++ +I
Sbjct: 331 LSD--------GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 251 GLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEK 310
K E KA LE KK L L + ++I +L E+
Sbjct: 383 WFRKNGEMEKA----LEFYKKMEVLGLTPSVFHV-----------HTIIQGWLKGQKHEE 427
Query: 311 AYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDT- 369
A +L + + L++ + +L+ L K +T EA LL + R G P + Y+
Sbjct: 428 ALKL-FDESFETGLANVFVCNTILSWLCKQGKTDEAT-ELLSKMESRGIG-PNVVSYNNV 484
Query: 370 LIENC--SNNEFKRLVGPAI----------TFSVKV-----------AIKAHHTMLHGNY 406
++ +C N + R+V I T+S+ + A++ + M N
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 407 KPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
+ +G VY +I + + KA + M+
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 139/320 (43%), Gaps = 34/320 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAV-KVFREMIDRGFSPSLDTYNAV 61
EA V M GL P+ TY +I + + K V K F EM G P T+N++
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ + G E A + EM R + D SY ++ A+ + L AFE+ M
Sbjct: 346 LAVCSRGGL-WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL--AFEILAQMPV 402
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
K I+P+ V+Y +ID GR EA +LF EM + G + D +Y L++ Y G
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSE 461
Query: 182 KAFHLHHEMVHKGFLPDFVT------GFS---------------------PSLVTYNALI 214
+A + EM G D VT G+ P+L+TY+ LI
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSC 274
GY G +EA+EIFR GL D V Y +I LCK A L EM K+
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE--G 579
Query: 275 LSLNEDTYETLMEQLSDEDT 294
+S N TY ++++ T
Sbjct: 580 ISPNVVTYNSIIDAFGRSAT 599
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 191/442 (43%), Gaps = 55/442 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+T+A +++E M PH + + L+ + + KA+ + R M+ G P TYN
Sbjct: 120 LTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNM 179
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-CALLLPPEEKLGKAFEMKKDM 119
+I G I AL +L +M G D ++Y VI C E +A KD
Sbjct: 180 IIGNLCKKGH-IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE---QAIRFWKDQ 235
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G P +TY VL++ +C + A ++ +M G + PD TY +L+N C +G
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY-PDIVTYNSLVNYNCRRGN 294
Query: 180 FSK-AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ A + H + H G + VTYN L++ CS E EI M +
Sbjct: 295 LEEVASVIQHILSH---------GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED----- 293
P ++Y +I+GLCK R +A + +M +++ CL + TY T++ +S E
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQK-CLP-DIVTYNTVLGAMSKEGMVDDA 403
Query: 294 -----------------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
TY+S+I+ +G ++KA +L + M G D++T L+ G
Sbjct: 404 IELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 337 LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAI 395
+ A E +L R G+ Y +I+ C E +++AI
Sbjct: 464 FCR-ANLVEEAGQVLKETSNRGNGIRGS-TYRLVIQGLCKKKE------------IEMAI 509
Query: 396 KAHHTMLHGNYKPDGTVYNLLI 417
+ ML G KPD T+Y ++
Sbjct: 510 EVVEIMLTGGCKPDETIYTAIV 531
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 33/347 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A ++ G P TYT L+ C+ +++A++V +M G P + TYN+++
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMKKDM 119
N G EVA +++ + GL + V+Y H +C+ E + E+ M
Sbjct: 287 NYNCRRGNLEEVA-SVIQHILSHGLELNTVTYNTLLHSLCS-----HEYWDEVEEILNIM 340
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
P +TY +LI+ LC LS A D F +ML + PD TY ++ +G
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL-PDIVTYNTVLGAMSKEGM 399
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A L G L + T P L+TYN++I G G +++ALE++ M + G+
Sbjct: 400 VDDAIEL------LGLLKN--TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
PD ++ R +I G C+ +A ++ E + + + TY +I
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR---------------GSTYRLVI 496
Query: 300 NDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ ++E A ++ +M G D + ++ G+ ++ +EA
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E V++ + GL + TY L+HS C + ++ M + P++ TYN
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I A + A++ +M E+ D V+Y V+ A + E + A E+ +
Sbjct: 355 LINGLCKARL-LSRAIDFFYQMLEQKCLPDIVTYNTVLGA--MSKEGMVDDAIELLGLLK 411
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ P +TY +ID L G + +A +L+ +ML G F PD+ T +L+ +C
Sbjct: 412 NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF-PDDITRRSLIYGFCRANLV 470
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + E ++G G S TY +I G C ++ A+E+ M G P
Sbjct: 471 EEAGQVLKETSNRG------NGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Query: 241 DTVSYRQVISGL 252
D Y ++ G+
Sbjct: 523 DETIYTAIVKGV 534
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 140/359 (38%), Gaps = 52/359 (14%)
Query: 107 EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
++L KA + + M G +PD++TY ++I NLC G + A L +M G PD T
Sbjct: 153 DQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM-SLSGSPPDVIT 211
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA 226
Y ++ C G +A + + G P ++TY L+ C A
Sbjct: 212 YNTVIRCMFDYGNAEQAIRFWKDQLQ--------NGCPPFMITYTVLVELVCRYCGSARA 263
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCK---IREPVKAYELKLEMDKKRSCLSLNEDTYE 283
+E+ M G PD V+Y +++ C+ + E + L L LN TY
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG-----LELNTVTYN 318
Query: 284 TLMEQLSDED----------------------TYSSLINDYLAQGDLEKAYQLDYVMGHD 321
TL+ L + TY+ LIN L +A Y M
Sbjct: 319 TLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKR 381
L D VT + +L ++K +A LL + C P I Y+++I+
Sbjct: 379 KCLPDIVTYNTVLGAMSKEGMVDDA-IELLGLLKNTCCP-PGLITYNSVID--------- 427
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
G A +K A++ +H ML PD LI+ R+ V +A + E + G
Sbjct: 428 --GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 12/225 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E EE+L MY P TY LI+ C+ S+A+ F +M+++ P + TYN V+
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G ++ A+E+L + ++Y VI L + + KA E+ M D
Sbjct: 392 GAMSKEGM-VDDAIELLGLLKNTCCPPGLITYNSVIDG--LAKKGLMKKALELYHQMLDA 448
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI PD +T LI C + EA + +E +RG TY ++ C + E
Sbjct: 449 GIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGN-GIRGSTYRLVIQGLCKKKEIEM 507
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
A + M+ G PD Y A++ G +G EA+
Sbjct: 508 AIEVVEIMLTGGCKPDE--------TIYTAIVKGVEEMGMGSEAV 544
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 143/369 (38%), Gaps = 48/369 (13%)
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
D T ++ NLC G+L++A L E++ R P + NL+ + KA +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLV-EVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCI 161
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
MV G +PD +TYN +I C G ++ AL + M G PD ++Y
Sbjct: 162 LRVMVMSGGVPD--------TITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYN 213
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS---------------- 290
VI C ++ D+ ++ TY L+E +
Sbjct: 214 TVIR--CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
Query: 291 ------DEDTYSSLINDYLAQGDLEK-AYQLDYVMGHDGYLSDNVTLSVLLNGLNKIART 343
D TY+SL+N +G+LE+ A + +++ H G + VT + LL+ L
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSH-GLELNTVTYNTLLHSLCSHEYW 330
Query: 344 TEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLH 403
E + L + ++ P I Y+ LI RL+ AI F + ML
Sbjct: 331 DEVEEIL--NIMYQTSYCPTVITYNILINGLCK---ARLLSRAIDF--------FYQMLE 377
Query: 404 GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
PD YN ++ S+ V A + + + P + + ++I L G +
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 464 MSWVIHNTL 472
+ H L
Sbjct: 438 ALELYHQML 446
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 45/356 (12%)
Query: 18 PHERTYTCLIHSFCQ--ESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEV 74
P T+ L+ C+ +S S +V M++ G P D I + TG ++
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEP--DQVTTDIAVRSLCETGRVDE 177
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAF--EMKKDMDDKGILPDSVTYE 132
A ++++E+ E+ D +Y ++ L + + F EM+ D D K PD V++
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK---PDLVSFT 234
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
+LIDN+C L EA L + L GF PD Y +M +C + S+A ++ +M
Sbjct: 235 ILIDNVCNSKNLREAMYLVSK-LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
+G PD +TYN LI+G GRV+EA + M + G PDT +Y +++G+
Sbjct: 294 EGVEPD--------QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 253 CKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS---------------------- 290
C+ E + A L EM+ R C + N+ TY TL+ L
Sbjct: 346 CRKGESLGALSLLEEME-ARGC-APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 291 DEDTYSSLINDYLAQGDLEKAYQL-DYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
+ + Y++L+ + G + +AY++ DY + LSD S L L + + E
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKS-LSDASAYSTLETTLKWLKKAKE 458
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA ++ ++ + G P Y ++ FC S+ S+AV V+++M + G P TYN
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + AG +E A L+ M + G D +Y ++ + E LG A + ++M+
Sbjct: 306 LIFGLSKAGR-VEEARMYLKTMVDAGYEPDTATYTSLMNGMCR-KGESLG-ALSLLEEME 362
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+G P+ TY L+ LC + + +L+ EM+ G + + Y L+ G+
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELY-EMMKSSGVKLESNGYATLVRSLVKSGKV 421
Query: 181 SKAFHLHHEMVHKGFLPD 198
++A+ + V L D
Sbjct: 422 AEAYEVFDYAVDSKSLSD 439
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 38/307 (12%)
Query: 141 VGRLSEAFDLFREMLH-RGGFSPDEHTYFNLMN--CYCLQGEFSKAFHLHHEMVHKGFLP 197
+ +++ LF+ +L + F P T+ L++ C S + + MV+ G P
Sbjct: 98 IAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEP 157
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
D VT + + C GRV EA ++ + + E PDT +Y ++ LCK ++
Sbjct: 158 D--------QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 258 PVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYV 317
YE EM D ++ + +S ++ LI++ +L +A L
Sbjct: 210 LHVVYEFVDEM----------RDDFDVKPDLVS----FTILIDNVCNSKNLREAMYLVSK 255
Query: 318 MGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNN 377
+G+ G+ D + ++ G +++ +EA ++ P I Y+TLI
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGVEPDQITYNTLI------ 307
Query: 378 EFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMV 437
G + V+ A TM+ Y+PD Y L+ R E A ++ EM
Sbjct: 308 -----FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME 362
Query: 438 HYGFVPH 444
G P+
Sbjct: 363 ARGCAPN 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA L+ M G P TYT L++ C++ + A+ + EM RG +P+ TYN ++
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
A ++ +E+ M G+ ++ Y ++ +L+ K+ +A+E+ D
Sbjct: 378 HGLCKARL-MDKGMELYEMMKSSGVKLESNGYATLVRSLV--KSGKVAEAYEVFDYAVDS 434
Query: 123 GILPDSVTYEVLIDNLCWVGRLSE 146
L D+ Y L L W+ + E
Sbjct: 435 KSLSDASAYSTLETTLKWLKKAKE 458
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 195/487 (40%), Gaps = 92/487 (18%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ--TNAFAG-TGIEVALEIL 79
Y I+ C KAV + E+IDR + D AV+ F ++ A ++
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAG-DDLRAVLGMVVRGFCNEMKMKAAESVI 306
Query: 80 REMPERGLTADAVSYCHVI---CALLLPPE------EKLGK------------------- 111
EM E G D + VI C + PE + LGK
Sbjct: 307 IEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKM 366
Query: 112 -----AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
A E K+ D I D V Y V D L +GR+ EAF+L +EM R G PD
Sbjct: 367 DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR-GIVPDVIN 425
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA 226
Y L++ YCLQG+ A L EM+ G SP L+TYN L+ G G +E
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIG--------NGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
LEI+ M G P+ V+ +I GLC R+ +A ED + +L
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA-----------------EDFFSSL- 519
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQ----LDYVMGHDGYLSDNVTLSVLLNGLNKIAR 342
EQ E+ +S + Y G +KAY+ L+Y + Y+ + S+ + G + A
Sbjct: 520 EQKCPENK-ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK--LFFSLCIEGYLEKAH 576
Query: 343 TTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITF-SVKVAIKAHHTM 401
K M AY + + +++G +V+ A TM
Sbjct: 577 DVLKK-------------MSAYRV------EPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 402 LHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI-KALHYDGR 460
+ PD Y ++I + R E+ KA +++ +M G P + + L+ + L D
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 461 YNEMSWV 467
++E V
Sbjct: 678 HHETCSV 684
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E+L+EM +G+ P YT LI +C + + A+ + EMI G SP L TYN ++
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAF----EMK-- 116
A G EV LEI M G +AV+ +I L + K + F E K
Sbjct: 466 SGLARNGHEEEV-LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Query: 117 -------KDMDDKGI--------------LPDSVTYEVLIDNLCWVGRLSEAFDLFREM- 154
K + G+ L SV Y L +LC G L +A D+ ++M
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV-YIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 155 LHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALI 214
+R P ++ +C +A L MV +G +PD L TY +I
Sbjct: 584 AYR--VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD--------LFTYTIMI 633
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIR-EPVKAYELKLEMDKKRS 273
+ YC L +Q+A +F M + G+ PD V+Y ++ K+ E + ++ E+ K+++
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKA 693
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
L E + + D Y+ LI+ +LE+A +L M G D V + L
Sbjct: 694 SEVLREFSAAGIG---LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 334 LN 335
++
Sbjct: 751 IS 752
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 121/317 (38%), Gaps = 70/317 (22%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A ++++EM G++P TY L+ + + ++++ M G P+ T +
Sbjct: 439 VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV 498
Query: 61 VIQTNAFAGTGIEV-----ALE---------ILREMPERGLTADAVS------------- 93
+I+ FA E +LE ++ E GL+ A
Sbjct: 499 IIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV 558
Query: 94 YCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFRE 153
Y + +L + E L KA ++ K M + P +I C + + EA LF
Sbjct: 559 YIKLFFSLCI--EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDT 616
Query: 154 MLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT------------ 201
M+ RG PD TY +++ YC E KA L +M +G PD VT
Sbjct: 617 MVERG-LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 202 ----------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGM 233
G +V Y LI C + +++A E+F M
Sbjct: 676 PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Query: 234 PEMGLSPDTVSYRQVIS 250
+ GL PD V+Y +IS
Sbjct: 736 IDSGLEPDMVAYTTLIS 752
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF-SPSLDTYNAV 61
+A E+L M G P TY LI FC+ + +KA ++F+++ SP + TY ++
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKD 118
I AG E A +L +M G+ V++ +L+ K G+ A E++
Sbjct: 284 ISGYCKAGKMRE-ASSLLDDMLRLGIYPTNVTF-----NVLVDGYAKAGEMLTAEEIRGK 337
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G PD VT+ LID C VG++S+ F L+ EM RG F P+ TY L+N C +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-PNAFTYSILINALCNEN 396
Query: 179 EFSKAFHLHHEMVHKGFLPD------FVTGF---------------------SPSLVTYN 211
KA L ++ K +P + GF P +T+
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
LI G+C GR+ EA+ IF M +G SPD ++ ++S L K +AY L K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516
Query: 272 RS 273
+S
Sbjct: 517 QS 518
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 185/445 (41%), Gaps = 47/445 (10%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY L S C+ A ++F M G SP+ ++ + A G + A +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK-LHFATALL-- 161
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK---GILPDSVTYEVLIDNL 138
L + V C ++ LL KL + + K D+ D+ T+ +LI L
Sbjct: 162 -----LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 139 CWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
C VG+ +A +L M G PD TY L+ +C E +KA + + V G +
Sbjct: 217 CGVGKAEKALELLGVM-SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSV-- 272
Query: 199 FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
SP +VTY ++I GYC G+++EA + M +G+ P V++ ++ G K E
Sbjct: 273 ----CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
+ A E++ +M D T++SLI+ Y G + + ++L M
Sbjct: 329 LTAEEIRGKMIS---------------FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 319 GHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE 378
G + T S+L+N L R +A+ LL + + +P +Y+ +I+
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKAR-ELLGQLASKDI-IPQPFMYNPVID------ 425
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
G V A M KPD + +LI H + +A +++ +MV
Sbjct: 426 -----GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Query: 439 YGFVPHMFSVLALIKALHYDGRYNE 463
G P +V +L+ L G E
Sbjct: 481 IGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 164/395 (41%), Gaps = 62/395 (15%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ E M G++P+ R L+ SF ++ + A + + S + +
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--------SFEVEGCCMV 173
Query: 64 TNAFAGT-----GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
N+ T +E A+++ E D ++ +I L K KA E+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC--GVGKAEKALELLGV 231
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G PD VTY LI C L++A ++F+++ SPD TY ++++ YC G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 179 EFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYN 211
+ +A L +M+ G P VT G P +VT+
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
+LI GYC +G+V + ++ M G+ P+ +Y +I+ LC +KA EL ++ K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 272 RS--------------CLSLNEDTYETLMEQLS------DEDTYSSLINDYLAQGDLEKA 311
C + + ++E++ D+ T++ LI + +G + +A
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 312 YQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ + M G D +T+S LL+ L K EA
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M AEE+ +M G P T+T LI +C+ + S+ +++ EM RG P+ TY+
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I NA + A E+L ++ + + Y VI K+ +A + ++M
Sbjct: 388 LI--NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC--KAGKVNEANVIVEEM 443
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ K PD +T+ +LI C GR+ EA +F +M+ G SPD+ T +L++C G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI-GCSPDKITVSSLLSCLLKAGM 502
Query: 180 FSKAFHLHHEMVHKG 194
+A+HL +++ KG
Sbjct: 503 AKEAYHL-NQIARKG 516
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 140/364 (38%), Gaps = 53/364 (14%)
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE--FSKAFHLH 187
TY +L +LC G A +F E + G SP+ L++ + +G+ F+ A L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 188 ---------------HEMVHKGFLPDFVTGFSPSL--------VTYNALIYGYCSLGRVQ 224
+ +V + D + F L T+N LI G C +G+ +
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYET 284
+ALE+ M G PD V+Y +I G CK E KA E+ ++ C
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP-------- 275
Query: 285 LMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTT 344
D TY+S+I+ Y G + +A L M G NVT +VL++G K
Sbjct: 276 ------DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 345 EAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHG 404
A+ + F CF P + + +LI+ G V + M
Sbjct: 330 TAEEIRGKMISFGCF--PDVVTFTSLID-----------GYCRVGQVSQGFRLWEEMNAR 376
Query: 405 NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
P+ Y++LI + KA + ++ +P F +I G+ NE
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 465 SWVI 468
+ ++
Sbjct: 437 NVIV 440
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF-SPSLDTYNAV 61
+A E+L M G P TY LI FC+ + +KA ++F+++ SP + TY ++
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKD 118
I AG E A +L +M G+ V++ +L+ K G+ A E++
Sbjct: 284 ISGYCKAGKMRE-ASSLLDDMLRLGIYPTNVTF-----NVLVDGYAKAGEMLTAEEIRGK 337
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G PD VT+ LID C VG++S+ F L+ EM RG F P+ TY L+N C +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF-PNAFTYSILINALCNEN 396
Query: 179 EFSKAFHLHHEMVHKGFLPD------FVTGF---------------------SPSLVTYN 211
KA L ++ K +P + GF P +T+
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
LI G+C GR+ EA+ IF M +G SPD ++ ++S L K +AY L K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516
Query: 272 RS 273
+S
Sbjct: 517 QS 518
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 185/445 (41%), Gaps = 47/445 (10%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY L S C+ A ++F M G SP+ ++ + A G + A +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGK-LHFATALL-- 161
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK---GILPDSVTYEVLIDNL 138
L + V C ++ LL KL + + K D+ D+ T+ +LI L
Sbjct: 162 -----LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 139 CWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
C VG+ +A +L M G PD TY L+ +C E +KA + + V G +
Sbjct: 217 CGVGKAEKALELLGVM-SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSV-- 272
Query: 199 FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
SP +VTY ++I GYC G+++EA + M +G+ P V++ ++ G K E
Sbjct: 273 ----CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
+ A E++ +M D T++SLI+ Y G + + ++L M
Sbjct: 329 LTAEEIRGKMIS---------------FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 319 GHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE 378
G + T S+L+N L R +A+ LL + + +P +Y+ +I+
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKAR-ELLGQLASKDI-IPQPFMYNPVID------ 425
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
G V A M KPD + +LI H + +A +++ +MV
Sbjct: 426 -----GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Query: 439 YGFVPHMFSVLALIKALHYDGRYNE 463
G P +V +L+ L G E
Sbjct: 481 IGCSPDKITVSSLLSCLLKAGMAKE 505
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 164/395 (41%), Gaps = 62/395 (15%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ E M G++P+ R L+ SF ++ + A + + S + +
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--------SFEVEGCCMV 173
Query: 64 TNAFAGT-----GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
N+ T +E A+++ E D ++ +I L K KA E+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC--GVGKAEKALELLGV 231
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G PD VTY LI C L++A ++F+++ SPD TY ++++ YC G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 179 EFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYN 211
+ +A L +M+ G P VT G P +VT+
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
+LI GYC +G+V + ++ M G+ P+ +Y +I+ LC +KA EL ++ K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 272 RS--------------CLSLNEDTYETLMEQLS------DEDTYSSLINDYLAQGDLEKA 311
C + + ++E++ D+ T++ LI + +G + +A
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 312 YQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ + M G D +T+S LL+ L K EA
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M AEE+ +M G P T+T LI +C+ + S+ +++ EM RG P+ TY+
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I NA + A E+L ++ + + Y VI K+ +A + ++M
Sbjct: 388 LI--NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC--KAGKVNEANVIVEEM 443
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ K PD +T+ +LI C GR+ EA +F +M+ G SPD+ T +L++C G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI-GCSPDKITVSSLLSCLLKAGM 502
Query: 180 FSKAFHLHHEMVHKG 194
+A+HL +++ KG
Sbjct: 503 AKEAYHL-NQIARKG 516
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 140/364 (38%), Gaps = 53/364 (14%)
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE--FSKAFHLH 187
TY +L +LC G A +F E + G SP+ L++ + +G+ F+ A L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMF-ECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 188 ---------------HEMVHKGFLPDFVTGFSPSL--------VTYNALIYGYCSLGRVQ 224
+ +V + D + F L T+N LI G C +G+ +
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYET 284
+ALE+ M G PD V+Y +I G CK E KA E+ ++ C
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP-------- 275
Query: 285 LMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTT 344
D TY+S+I+ Y G + +A L M G NVT +VL++G K
Sbjct: 276 ------DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 345 EAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHG 404
A+ + F CF P + + +LI+ G V + M
Sbjct: 330 TAEEIRGKMISFGCF--PDVVTFTSLID-----------GYCRVGQVSQGFRLWEEMNAR 376
Query: 405 NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
P+ Y++LI + KA + ++ +P F +I G+ NE
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 465 SWVI 468
+ ++
Sbjct: 437 NVIV 440
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 12/253 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A E+ + G+ P+ R+Y L+ +FC S A ++F +M++R P +D+Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+IQ G + A+E+L +M +G D +SY ++ +L + +L +A+++ M
Sbjct: 231 LIQGFCRKGQ-VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR--KTQLREAYKLLCRMK 287
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG PD V Y +I C R +A + +ML G SP+ +Y L+ C QG F
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS-NGCSPNSVSYRTLIGGLCDQGMF 346
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+ EM+ KGF P F N L+ G+CS G+V+EA ++ + + G +
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 241 DTVSYRQVISGLC 253
+ ++ VI +C
Sbjct: 399 HSDTWEMVIPLIC 411
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 11/249 (4%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
++VL + G +T LI + + K + F +M++ F+P N ++
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDV 163
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
++ A E+ + G+ + SY ++ A L + L A+++ M ++ +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL--NDDLSIAYQLFGKMLERDV 221
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
+PD +Y++LI C G+++ A +L +ML++G F PD +Y L+N C + + +A+
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG-FVPDRLSYTTLLNSLCRKTQLREAY 280
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
L M KG PD LV YN +I G+C R +A ++ M G SP++VS
Sbjct: 281 KLLCRMKLKGCNPD--------LVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 245 YRQVISGLC 253
YR +I GLC
Sbjct: 333 YRTLIGGLC 341
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 142 GRLSEAFDLFRE-MLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
G L +AF+LF+ LH G P+ +Y LM +CL + S A+ L +M+ + +PD
Sbjct: 169 GYLQKAFELFKSSRLH--GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD-- 224
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
+ +Y LI G+C G+V A+E+ M G PD +SY +++ LC+ + +
Sbjct: 225 ------VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE 278
Query: 261 AYELKLEMDKKRSCLSLNEDT--YETLMEQLSDEDT---YSSLINDYLAQG 306
AY+L M K + C N D Y T++ ED +++D L+ G
Sbjct: 279 AYKLLCRM-KLKGC---NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 112/294 (38%), Gaps = 45/294 (15%)
Query: 221 GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
G +Q+A E+F+ G+ P+T SY ++ C + AY+L +M L D
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM--------LERD 220
Query: 281 TYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
+ D D+Y LI + +G + A +L M + G++ D ++ + LLN L +
Sbjct: 221 V-------VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK 273
Query: 341 ARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHT 400
+ EA L C P + Y+T+I +G A K
Sbjct: 274 TQLREAYKLLCRMKLKGC--NPDLVHYNTMI-----------LGFCREDRAMDARKVLDD 320
Query: 401 MLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
ML P+ Y LI + EM+ GF PH L+K G+
Sbjct: 321 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Query: 461 YNEMSWVIHNTLRS----------------CNLSDSELLKVLNEIDFSKPEMTA 498
E V+ +++ CN +SE +K+ E D K E+T
Sbjct: 381 VEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE-DAVKEEITG 433
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 32/279 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A EVL+EM G P E + CL+ + C+ A K+F +M R F +L + +
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTS 257
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G +E A +L +M E G D V Y +++ K+ A+++ +DM
Sbjct: 258 LLYGWCRVGKMME-AKYVLVQMNEAGFEPDIVDYTNLLSG--YANAGKMADAYDLLRDMR 314
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+G P++ Y VLI LC V R+ EA +F EM R D TY L++ +C G+
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM-ERYECEADVVTYTALVSGFCKWGKI 373
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
K + + +M+ KG +P +T + P + YN +
Sbjct: 374 DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
I C LG V+EA+ ++ M E GLSP ++ +I+GL
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 158/381 (41%), Gaps = 50/381 (13%)
Query: 88 TADAVSYCHVI-----CALLLPPEEKLGKAF----EMKKDMDDKGILPDSVTYEVLIDNL 138
A YCH I +L + G + EM+K+ + + I P+ + VL+
Sbjct: 137 AAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKE-NPQLIEPE--LFVVLVQRF 193
Query: 139 CWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
+ +A ++ EM + GF PDE+ + L++ C G A L +M +
Sbjct: 194 ASADMVKKAIEVLDEM-PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR----- 247
Query: 199 FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
F +L + +L+YG+C +G++ EA + M E G PD V Y ++SG +
Sbjct: 248 ----FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
AY+L +M +R N + Y L++ L D +E+A ++ M
Sbjct: 304 ADAYDLLRDM--RRRGFEPNANCYTVLIQALCKVDR-------------MEEAMKVFVEM 348
Query: 319 GHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE 378
+D VT + L++G K + K Y++ + MP+ + Y ++ E
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKID--KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKE 406
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
S + ++ M Y PD +YN++I + EV +A ++ EM
Sbjct: 407 -----------SFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Query: 439 YGFVPHMFSVLALIKALHYDG 459
G P + + + +I L G
Sbjct: 456 NGLSPGVDTFVIMINGLASQG 476
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 41/302 (13%)
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ FA ++ A+E+L EMP+ G D + ++ AL K G + K
Sbjct: 187 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALC-----KHGSVKDAAKLF 241
Query: 120 DDKGI-LPDSVTY-EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+D + P ++ Y L+ C VG++ EA + +M + GF PD Y NL++ Y
Sbjct: 242 EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM-NEAGFEPDIVDYTNLLSGYANA 300
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
G+ + A+ L +M +GF P+ Y LI C + R++EA+++F M
Sbjct: 301 GKMADAYDLLRDMRRRGF--------EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK----------------------RSCL 275
D V+Y ++SG CK + K Y + +M KK CL
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412
Query: 276 SLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN 335
L E + +E D Y+ +I G++++A +L M +G T +++N
Sbjct: 413 ELMEKMRQ--IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMIN 470
Query: 336 GL 337
GL
Sbjct: 471 GL 472
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A ++L +M +G P+ YT LI + C+ R +A+KVF EM + TY A
Sbjct: 303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ + F G I+ +L +M ++GL ++Y H++ A +E + E+ + M
Sbjct: 363 LV--SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA--HEKKESFEECLELMEKM 418
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
PD Y V+I C +G + EA L+ EM G SP T+ ++N QG
Sbjct: 419 RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM-EENGLSPGVDTFVIMINGLASQGC 477
Query: 180 FSKAFHLHHEMVHKGFL 196
+A EMV +G
Sbjct: 478 LLEASDHFKEMVTRGLF 494
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 12/238 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA+ VL +M G P YT L+ + + + A + R+M RGF P+ + Y
Sbjct: 268 MMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTV 327
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+IQ +E A+++ EM AD V+Y ++ K+ K + + DM
Sbjct: 328 LIQALCKVDR-MEEAMKVFVEMERYECEADVVTYTALVSGFC--KWGKIDKCYIVLDDMI 384
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG++P +TY ++ E +L E + + + PD Y ++ C GE
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELM-EKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+A L +EM G SP + T+ +I G S G + EA + F+ M GL
Sbjct: 444 KEAVRLWNEMEE--------NGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 165/418 (39%), Gaps = 88/418 (21%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A+ ++ EM G +P+ +Y LI C + KA+ +F M G P+ T N
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 61 VI------------------------QTNA--------------FAGTGIEVALEILREM 82
++ Q NA F + ALE+ +EM
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 83 PERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVG 142
++ + AD+V Y +I L + A+ DM +G+ PD TY LI LC G
Sbjct: 292 SQKNVPADSVVYNVIIRGLC--SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT- 201
+ EA DL M GG +PD+ +Y ++ C+ G+ ++A M+ LP+ +
Sbjct: 350 KFDEACDLHGTM-QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 202 --------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
G P++ T NALI+GY GR+ +A + M
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 236 MGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY 295
+ PDT +Y ++ C + A++L EM +R C D TY
Sbjct: 469 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEM-LRRGC--------------QPDIITY 513
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA-----KW 348
+ L+ +G L+KA L + G D+V +L ++ R EA KW
Sbjct: 514 TELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKW 571
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 164/419 (39%), Gaps = 91/419 (21%)
Query: 106 EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
+ KL A ++K M G++P +T+ L++ LC G + +A L REM G SP+
Sbjct: 134 QGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGP-SPNCV 192
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT------------------------ 201
+Y L+ C KA +L + M G P+ VT
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 202 ------GFSPSLVTYNALIYGYC-SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
+P + ++ C G V +ALE+++ M + + D+V Y +I GLC
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
V AY +M K+ +N D + TY++LI+ +G ++A L
Sbjct: 313 SGNMVAAYGFMCDMVKR----GVNPDVF-----------TYNTLISALCKEGKFDEACDL 357
Query: 315 DYVMGHDGYLSDNVTLSVLLNGL---NKIARTTE----------AKWYLLWTVFFRCFGM 361
M + G D ++ V++ GL + R E LLW V +G
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 362 PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYK-------------- 407
DT + ++ +++ VK + ++ ++HG K
Sbjct: 418 YG----DT-------SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Query: 408 ------PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
PD T YNLL+ + A+ +Y EM+ G P + + L++ L + GR
Sbjct: 467 RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 65/357 (18%)
Query: 169 NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALE 228
++M CLQG+ A L +M++ G +P L+T+N L+ G C G +++A
Sbjct: 126 SIMRDLCLQGKLDAALWLRKKMIYSGVIP--------GLITHNHLLNGLCKAGYIEKADG 177
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK------KRSC-------- 274
+ R M EMG SP+ VSY +I GLC + KA L M+K + +C
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 275 -LSLNEDTYETLMEQLSDEDTYSS---------LINDYLAQGDLEKAYQLDYVMGHDGYL 324
+ + + L+E++ D ++ L++ G++ +A ++ M
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRL- 382
+D+V +V++ GL A Y + P Y+TLI C +F
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAA--YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355
Query: 383 ----------VGPAITFSVKVAIKAHHTMLHGNYK---------------PDGTVYNLLI 417
V P S KV I+ +HG+ P+ ++N++I
Sbjct: 356 DLHGTMQNGGVAPD-QISYKVIIQG--LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 418 FDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRS 474
+ R + A ++ M+ YG P++++ ALI GR + +W + N +RS
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID-AWWVKNEMRS 468
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 37/323 (11%)
Query: 163 DEHTYFNLMNCYCLQGEFSKAFHLHHEMVH-KGFLPDFVTGFSPSLVTYNALIYGYCSLG 221
D FN+++ Y L+ + L + K F + L +++++ C G
Sbjct: 83 DPEAIFNVLD-YILKSSLDRLASLRESVCQTKSF------DYDDCLSIHSSIMRDLCLQG 135
Query: 222 RVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDT 281
++ AL + + M G+ P +++ +++GLCK KA L EM +
Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE----------- 184
Query: 282 YETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIA 341
M + +Y++LI + +++KA L M G + VT +++++ L +
Sbjct: 185 ----MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 342 RTTEAKWYLLWTVFFRC-FGMPAYIIYDT-LIENCSNNEFKRLVGPAITFSVKVAIKAHH 399
LL + P I+ T L+++C N +V A++
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNG-----------NVVQALEVWK 289
Query: 400 TMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDG 459
M N D VYN++I S + AY +MV G P +F+ LI AL +G
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 460 RYNEMSWVIHNTLRSCNLSDSEL 482
+++E + +H T+++ ++ ++
Sbjct: 350 KFDE-ACDLHGTMQNGGVAPDQI 371
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 210/497 (42%), Gaps = 80/497 (16%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A ++ M +GL P + ++ ++ FC+ KA++ + M +PS +
Sbjct: 361 LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420
Query: 61 VIQTNAFAGTGIEVALEI----------------------------------LREMPERG 86
+IQ E ALEI L+ M ++G
Sbjct: 421 MIQ-GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG 479
Query: 87 LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSE 146
+ + V Y +++ A L ++ + +M +KG+ P++ TY +LID
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARS--IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A+D+ +M + F +E Y ++N C G+ SKA + ++ + +S S
Sbjct: 538 AWDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE-------KRYSMS 589
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK---------IRE 257
+YN++I G+ +G A+E +R M E G SP+ V++ +I+G CK +
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 258 PVKAYELKLEMDKKRS-----CLSLNEDTYETLMEQL------SDEDTYSSLINDYLAQG 306
+K+ ELKL++ + C + T TL +L + Y+SLI+ + G
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 307 DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYII 366
++ A L M +DG D T + +++GL K A L++ +P I+
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD--LYSELLDLGIVPDEIL 767
Query: 367 YDTLIENCSNN-EFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLE 425
+ L+ S +F + A K M + P+ +Y+ +I H R
Sbjct: 768 HMVLVNGLSKKGQFLK------------ASKMLEEMKKKDVTPNVLLYSTVIAGHHREGN 815
Query: 426 VHKAYNMYMEMVHYGFV 442
+++A+ ++ EM+ G V
Sbjct: 816 LNEAFRLHDEMLEKGIV 832
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 180/419 (42%), Gaps = 49/419 (11%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A L+ M KG+ P+ Y ++ + C+ A +F EM+++G P+ TY+ +I
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKKDM- 119
F + A +++ +M A+ V Y +I L K+G KA EM +++
Sbjct: 528 -GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLC-----KVGQTSKAKEMLQNLI 581
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+K +Y +ID VG A + +REM G SP+ T+ +L+N +C
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM-SENGKSPNVVTFTSLINGFCKSNR 640
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A + HEM D L Y ALI G+C ++ A +F +PE+GL
Sbjct: 641 MDLALEMTHEMKSMELKLD--------LPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEM-DKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
P+ Y +ISG + + A +L +M + SC D TY+++
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC----------------DLFTYTTM 736
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC 358
I+ L G++ A L + G + D + VL+NGL+K + +A L +
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML--EEMKKK 794
Query: 359 FGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
P ++Y T+I G ++ A + H ML D TV+NLL+
Sbjct: 795 DVTPNVLLYSTVI-----------AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/509 (22%), Positives = 208/509 (40%), Gaps = 71/509 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA+E+ +M G+ T L+ + +E + +AVK+FR ++ RG P ++ +
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281
Query: 63 QTNAFAGTGIEVALEILREMPER-GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
Q A + +AL++LREM + G+ A +Y VI A + E + +A + +M
Sbjct: 282 QA-ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFV--KEGNMEEAVRVMDEMVG 338
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
GI + L++ C L +A DLF M G +PD+ + ++ +C E
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRM-EEEGLAPDKVMFSVMVEWFCKNMEME 397
Query: 182 KAFHLHHEMVHKGFLPD------FVTG-------------FSPSLVTY-------NALIY 215
KA + M P + G F+ S ++ N +
Sbjct: 398 KAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL 457
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCL 275
+C G+V A + M + G+ P+ V Y ++ C+++ MD RS
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK----------NMDLARSIF 507
Query: 276 SLNEDTYETLMEQLSDED-TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL 334
S E L + L + TYS LI+ + D + A+ + M + ++ V + ++
Sbjct: 508 S------EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTII 561
Query: 335 NGLNKIARTTEAKWYLLWTVFFRCFGM-------------------PAYIIYDTLIENCS 375
NGL K+ +T++AK L + + + M A Y + EN
Sbjct: 562 NGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK 621
Query: 376 NNE---FKRLV-GPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYN 431
+ F L+ G + + +A++ H M K D Y LI + ++ AY
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 432 MYMEMVHYGFVPHMFSVLALIKALHYDGR 460
++ E+ G +P++ +LI G+
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGK 710
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 65/373 (17%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSF------------------------------ 30
M A + EM KGL P+ TY+ LI F
Sbjct: 500 MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNT 559
Query: 31 -----CQESRASKAVKVFREMI-DRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMP 83
C+ + SKA ++ + +I ++ +S S +YN++I + F G + A+E REM
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII--DGFVKVGDTDSAVETYREMS 617
Query: 84 ERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
E G + + V++ +I ++ A EM +M + D Y LID C
Sbjct: 618 ENGKSPNVVTFTSLINGFC--KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
+ A+ LF E L G P+ Y +L++ + G+ A L+ +MV+ G
Sbjct: 676 MKTAYTLFSE-LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND--------GI 726
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
S L TY +I G G + A +++ + ++G+ PD + + +++GL K + +KA +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY 323
+ EM KK + T L+ YS++I + +G+L +A++L M G
Sbjct: 787 MLEEMKKK-------DVTPNVLL--------YSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Query: 324 LSDNVTLSVLLNG 336
+ D+ ++L++G
Sbjct: 832 VHDDTVFNLLVSG 844
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 13/257 (5%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVA 75
LTP R + L++++ + R AV F M+DR P + N V+ + + I+ A
Sbjct: 167 LTP--RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNL-IDEA 223
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
EI +M G+ D V+ ++ A L E K +A ++ + + +G PD + + + +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLR--ERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
C L A DL REM + G + TY +++ + +G +A + EMV GF
Sbjct: 282 QAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV--GF 339
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI 255
G S++ +L+ GYC + +AL++F M E GL+PD V + ++ CK
Sbjct: 340 ------GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
Query: 256 REPVKAYELKLEMDKKR 272
E KA E + M R
Sbjct: 394 MEMEKAIEFYMRMKSVR 410
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 22/265 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E EM G +P+ T+T LI+ FC+ +R A+++ EM L Y A+I
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI- 667
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKDM 119
+ F ++ A + E+PE GL + Y +I LGK A ++ K M
Sbjct: 668 -DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF-----RNLGKMDAAIDLYKKM 721
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ GI D TY +ID L G ++ A DL+ E+L G PDE + L+N +G+
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGLSKKGQ 780
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F KA + EM K +P+++ Y+ +I G+ G + EA + M E G+
Sbjct: 781 FLKASKMLEEMKKK--------DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 240 PDTVSYRQVISGLCKIREPVKAYEL 264
D + ++SG ++ +P A ++
Sbjct: 833 HDDTVFNLLVSG--RVEKPPAASKI 855
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 12/231 (5%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY +++ +C R KA++V +EM++RG +P+L TYN +++ AG I A E E
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ-IRHAWEFFLE 255
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M +R D V+Y V+ + E K +A + +M +G+LP TY +I LC
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIK--RARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
+ A +F EM+ R G+ P+ TY L+ GEFS+ L M ++G P+F
Sbjct: 314 DNVENAVVMFEEMVRR-GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF-- 370
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
TYN +I Y V++AL +F M P+ +Y +ISG+
Sbjct: 371 ------QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 28/331 (8%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
++ M + P +T+ + + + KAVK+F M + G L ++N ++
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV-L 171
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
+E A E+ R + R + D V+Y ++ L ++ KA E+ K+M ++GI P
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI--KRTPKALEVLKEMVERGINP 228
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+ TY ++ G++ A++ F EM R D TY +++ + + GE +A ++
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-EIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
EM+ +G L PS+ TYNA+I C V+ A+ +F M G P+ +Y
Sbjct: 288 FDEMIREGVL--------PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQG 306
+I GL E + EL M+ + C E ++ TY+ +I Y
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENE-GC----EPNFQ----------TYNMMIRYYSECS 384
Query: 307 DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
++EKA L MG L + T ++L++G+
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 40/342 (11%)
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I P T+ ++ + G+ +A LF M G F D ++ +++ C KA
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ-DLASFNTILDVLCKSKRVEKA 180
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ L + + FS VTYN ++ G+C + R +ALE+ + M E G++P+
Sbjct: 181 YELFRALRGR---------FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y ++ G + + A+E LEM KKR C D TY+++++ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEM-KKRDC--------------EIDVVTYTTVVHGFG 276
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
G++++A + M +G L T + ++ L K A +++ R P
Sbjct: 277 VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA--VVMFEEMVRRGYEPN 334
Query: 364 YIIYDTLIENCSN-NEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
Y+ LI + EF R + M + +P+ YN++I +S
Sbjct: 335 VTTYNVLIRGLFHAGEFSR------------GEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
EV KA ++ +M +P++ + LI + R +M
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 424
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A EVL+EM +G+ P+ TY ++ F + + A + F EM R + TY V+
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
AG I+ A + EM G+ +Y +I L ++ + A M ++M +
Sbjct: 273 HGFGVAGE-IKRARNVFDEMIREGVLPSVATYNAMIQVLC--KKDNVENAVVMFEEMVRR 329
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G P+ TY VLI L G S +L + M + G P+ TY ++ Y E K
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC-EPNFQTYNMMIRYYSECSEVEK 388
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYG 216
A L +M LP+ L TYN LI G
Sbjct: 389 ALGLFEKMGSGDCLPN--------LDTYNILISG 414
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A V +EM +G+ P TY +I C++ AV +F EM+ RG+ P++ TYN
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-----CALLLPPEEKLGKAFEM 115
+I+ AG E+++ M G + +Y +I C+ ++ KA +
Sbjct: 341 LIRGLFHAGE-FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS-------EVEKALGL 392
Query: 116 KKDMDDKGILPDSVTYEVLIDNLCWVGRLSE 146
+ M LP+ TY +LI + +V + SE
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGM-FVRKRSE 422
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 24/327 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A + +M G P + + S + R A++ +REM SP+ T N V+
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEK--LGKAFEMKKDMDD 121
+G ++ +E+L++M G A VSY +I EK L A ++K M
Sbjct: 247 GYCRSGK-LDKGIELLQDMERLGFRATDVSYNTLIAGHC----EKGLLSSALKLKNMMGK 301
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G+ P+ VT+ LI C +L EA +F EM +P+ TY L+N Y QG+
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM-KAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
AF + +MV G D ++TYNALI+G C + ++A + + + + L P+
Sbjct: 361 MAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL---SDEDTYSSL 298
+ ++ +I G C + + +EL M RS NE T+ L+ D D S +
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSM--IRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 299 INDYLAQG---DLEKAYQLDYVMGHDG 322
+ + + + D +Q+ + H G
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 155/355 (43%), Gaps = 39/355 (10%)
Query: 107 EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+K A + M D G LP + + +L GR+ A +REM R SP+ +T
Sbjct: 182 KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM-RRCKISPNPYT 240
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA 226
+M+ YC G+ K L +M GF + V+YN LI G+C G + A
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMER--------LGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
L++ M + GL P+ V++ +I G C+ + +A ++ EM +++ +T
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM----KAVNVAPNTV---- 344
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
TY++LIN Y QGD E A++ M +G D +T + L+ GL K A+T +A
Sbjct: 345 -------TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV-GPAITFSVKVAIKAHHTMLHGN 405
++ + + L+ N S F L+ G + + + + +M+
Sbjct: 398 AQFV------------KELDKENLVPNSST--FSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
P+ +N+L+ R+ + A + EMV +V + L + G+
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 69/365 (18%)
Query: 17 TPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVA 75
TP R + L +F + A F +M D GF P++++ NA + ++ G G +++A
Sbjct: 167 TP--RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM--SSLLGQGRVDIA 222
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
L REM C I P+ T +++
Sbjct: 223 LRFYREMRR--------------CK-----------------------ISPNPYTLNMVM 245
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
C G+L + +L ++M R GF + +Y L+ +C +G S A L + M
Sbjct: 246 SGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK--- 301
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI 255
+G P++VT+N LI+G+C ++QEA ++F M + ++P+TV+Y +I+G +
Sbjct: 302 -----SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 256 REPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLD 315
+ A+ +M C + D TY++LI Q KA Q
Sbjct: 357 GDHEMAFRFYEDM----VCNGIQRDIL-----------TYNALIFGLCKQAKTRKAAQFV 401
Query: 316 YVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-C 374
+ + + ++ T S L+ G + R + + L+ R P ++ L+ C
Sbjct: 402 KELDKENLVPNSSTFSALIMG--QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 375 SNNEF 379
N +F
Sbjct: 460 RNEDF 464
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A ++ M GL P+ T+ LIH FC+ + +A KVF EM +P+ TYN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 61 VIQTNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N ++ G E+A +M G+ D ++Y +I L + K KA + K++
Sbjct: 349 LI--NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC--KQAKTRKAAQFVKEL 404
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D + ++P+S T+ LI C F+L++ M+ R G P+E T+ L++ +C +
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI-RSGCHPNEQTFNMLVSAFCRNED 463
Query: 180 FSKAFHLHHEMVHKGFLPDFVT 201
F A + EMV + D T
Sbjct: 464 FDGASQVLREMVRRSIPLDSRT 485
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 12/267 (4%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E+L++M G + +Y LI C++ S A+K+ M G P++ T+N +I
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A ++ A ++ EM + + V+Y +I + ++ AF +DM GI
Sbjct: 319 CRA-MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM--AFRFYEDMVCNGIQ 375
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
D +TY LI LC + +A +E L + P+ T+ L+ C++ + F
Sbjct: 376 RDILTYNALIFGLCKQAKTRKAAQFVKE-LDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
L+ M+ +G P+ T+N L+ +C A ++ R M + D+ +
Sbjct: 435 LYKSMIR--------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 486
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKR 272
QV +GL + +L EM+ K+
Sbjct: 487 HQVCNGLKHQGKDQLVKKLLQEMEGKK 513
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 24/327 (7%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A + +M G P + + S + R A++ +REM SP+ T N V+
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEK--LGKAFEMKKDMDD 121
+G ++ +E+L++M G A VSY +I EK L A ++K M
Sbjct: 247 GYCRSGK-LDKGIELLQDMERLGFRATDVSYNTLIAGHC----EKGLLSSALKLKNMMGK 301
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G+ P+ VT+ LI C +L EA +F EM +P+ TY L+N Y QG+
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM-KAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
AF + +MV G D ++TYNALI+G C + ++A + + + + L P+
Sbjct: 361 MAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL---SDEDTYSSL 298
+ ++ +I G C + + +EL M RS NE T+ L+ D D S +
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSM--IRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 299 INDYLAQG---DLEKAYQLDYVMGHDG 322
+ + + + D +Q+ + H G
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 155/355 (43%), Gaps = 39/355 (10%)
Query: 107 EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+K A + M D G LP + + +L GR+ A +REM R SP+ +T
Sbjct: 182 KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM-RRCKISPNPYT 240
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA 226
+M+ YC G+ K L +M GF + V+YN LI G+C G + A
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMER--------LGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
L++ M + GL P+ V++ +I G C+ + +A ++ EM +++ +T
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM----KAVNVAPNTV---- 344
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
TY++LIN Y QGD E A++ M +G D +T + L+ GL K A+T +A
Sbjct: 345 -------TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV-GPAITFSVKVAIKAHHTMLHGN 405
++ + + L+ N S F L+ G + + + + +M+
Sbjct: 398 AQFV------------KELDKENLVPNSST--FSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
P+ +N+L+ R+ + A + EMV +V + L + G+
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 69/365 (18%)
Query: 17 TPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVA 75
TP R + L +F + A F +M D GF P++++ NA + ++ G G +++A
Sbjct: 167 TP--RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM--SSLLGQGRVDIA 222
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
L REM C I P+ T +++
Sbjct: 223 LRFYREMRR--------------CK-----------------------ISPNPYTLNMVM 245
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
C G+L + +L ++M R GF + +Y L+ +C +G S A L + M
Sbjct: 246 SGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK--- 301
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI 255
+G P++VT+N LI+G+C ++QEA ++F M + ++P+TV+Y +I+G +
Sbjct: 302 -----SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 256 REPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLD 315
+ A+ +M C + D TY++LI Q KA Q
Sbjct: 357 GDHEMAFRFYEDM----VCNGIQRDIL-----------TYNALIFGLCKQAKTRKAAQFV 401
Query: 316 YVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-C 374
+ + + ++ T S L+ G + R + + L+ R P ++ L+ C
Sbjct: 402 KELDKENLVPNSSTFSALIMG--QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 375 SNNEF 379
N +F
Sbjct: 460 RNEDF 464
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ A ++ M GL P+ T+ LIH FC+ + +A KVF EM +P+ TYN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 61 VIQTNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I N ++ G E+A +M G+ D ++Y +I L + K KA + K++
Sbjct: 349 LI--NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC--KQAKTRKAAQFVKEL 404
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D + ++P+S T+ LI C F+L++ M+ R G P+E T+ L++ +C +
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI-RSGCHPNEQTFNMLVSAFCRNED 463
Query: 180 FSKAFHLHHEMVHKGFLPDFVT 201
F A + EMV + D T
Sbjct: 464 FDGASQVLREMVRRSIPLDSRT 485
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 12/267 (4%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E+L++M G + +Y LI C++ S A+K+ M G P++ T+N +I
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A ++ A ++ EM + + V+Y +I + ++ AF +DM GI
Sbjct: 319 CRA-MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM--AFRFYEDMVCNGIQ 375
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
D +TY LI LC + +A +E L + P+ T+ L+ C++ + F
Sbjct: 376 RDILTYNALIFGLCKQAKTRKAAQFVKE-LDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
L+ M+ +G P+ T+N L+ +C A ++ R M + D+ +
Sbjct: 435 LYKSMIR--------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTV 486
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKR 272
QV +GL + +L EM+ K+
Sbjct: 487 HQVCNGLKHQGKDQLVKKLLQEMEGKK 513
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 200/486 (41%), Gaps = 85/486 (17%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
G++P+ T I S C+ +RA+ A + +++ +NA++ + G +++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALL---SCLGRNMDI 310
Query: 75 AL--EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEM------KKDMDDKGILP 126
+ +++ +M E + D V+ +I L ++ +A E+ K+ D I
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLC--KSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
DS+ + LID LC VGRL EA +L M +P+ TY L++ YC G+ A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 187 HHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYGYCS 219
M P+ VT G ++VTY LI+ CS
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 220 LGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNE 279
+ V++A+ + M E G SPD Y +ISGLC++R + D R L E
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR---------DHDAIRVVEKLKE 539
Query: 280 DTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+ D Y+ LI + + + EK Y++ M +G D++T + L++ K
Sbjct: 540 GGFSL------DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 340 ------IARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSV 391
+ R E R G+ P Y +I+ CS E
Sbjct: 594 HKDFESVERMMEQ---------MREDGLDPTVTTYGAVIDAYCSVGELDE---------- 634
Query: 392 KVAIKAHHTM-LHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
A+K M LH P+ +YN+LI S+ +A ++ EM P++ + A
Sbjct: 635 --ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 451 LIKALH 456
L K L+
Sbjct: 693 LFKCLN 698
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 159/387 (41%), Gaps = 83/387 (21%)
Query: 1 MTEAEEVLEEM-YHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
+ EAEE+L M + P+ TY CLI +C+ + A +V M + P++ T N
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMK 116
++ G+ +A+ +M + G+ + V+Y H C++ + KA
Sbjct: 446 TIV-GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV-----SNVEKAMYWY 499
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
+ M + G PD+ Y LI LC V R +A + E L GGFS D Y L+ +C
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV-EKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVT 209
+ K + + +M +G PD +T G P++ T
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGL----SPDTVSYRQVISGLCKIREPVKAYELK 265
Y A+I YCS+G + EAL++F+ +MGL +P+TV Y +I+ K+ +A LK
Sbjct: 619 YGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 266 LEMDKK----------------------------------RSCLSLNEDTYETLMEQLSD 291
EM K +SC N+ T E LME+LS
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC-EPNQITMEILMERLSG 734
Query: 292 EDTYSSL---INDYLAQGDLEKAYQLD 315
D L + Y EKA D
Sbjct: 735 SDELVKLRKFMQGYSVASPTEKASPFD 761
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 163/373 (43%), Gaps = 38/373 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREM----IDRGFSPSLD 56
++ +++ +M + P T LI++ C+ R +A++VF +M D G D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKAD 369
Query: 57 T--YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE 114
+ +N +I G E ++R E +AV+Y +I KL A E
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAG--KLETAKE 427
Query: 115 MKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+ M + I P+ VT ++ +C L+ A F +M + G + TY L++
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-EKEGVKGNVVTYMTLIHAC 486
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
C KA + + +M+ G SP Y ALI G C + R +A+ + +
Sbjct: 487 CSVSNVEKAMYWYEKMLE--------AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD---KKRSCLSLNE-----------D 280
E G S D ++Y +I C K YE+ +M+ KK ++ N +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 TYETLMEQLSDE------DTYSSLINDYLAQGDLEKAYQLDYVMG-HDGYLSDNVTLSVL 333
+ E +MEQ+ ++ TY ++I+ Y + G+L++A +L MG H + V ++L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 334 LNGLNKIARTTEA 346
+N +K+ +A
Sbjct: 659 INAFSKLGNFGQA 671
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 182/440 (41%), Gaps = 46/440 (10%)
Query: 6 EVLEEMYHKG-LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
EV EM ++G P TY+ LI S+ + R A+++F EM D P+ Y ++
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
F +E AL++ EM G + +Y +I L ++ +A+ KDM G+
Sbjct: 278 -YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL--GKAGRVDEAYGFYKDMLRDGL 334
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREM-LHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
PD V L++ L VGR+ E ++F EM + R +P +Y + ++ F
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR--CTPTVVSYNTV-----IKALFESK 387
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
H+ V F SPS TY+ LI GYC RV++AL + M E G P
Sbjct: 388 AHVSE--VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y +I+ L K + A EL E+ + +S Y+ +I +
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVS---------------SRVYAVMIKHFG 490
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
G L +A L M + G D + L++G+ K EA L C
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA--- 547
Query: 364 YIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI--FDHS 421
D N N F R P + AI+ T+ H KPDG YN L+ F H+
Sbjct: 548 ----DINSHNIILNGFARTGVP------RRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 422 RSLEVHKAYNMYMEMVHYGF 441
E +A M EM GF
Sbjct: 598 GMFE--EAARMMREMKDKGF 615
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 14/256 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++E ++M ++P E TY+ LI +C+ +R KA+ + EM ++GF P Y +
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 61 VIQTNAFA-GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I NA E A E+ +E+ E + S + + KL +A ++ +M
Sbjct: 450 LI--NALGKAKRYEAANELFKELKEN--FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
++G PD Y L+ + G ++EA L R+M G D +++ ++N + G
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM-EENGCRADINSHNIILNGFARTGV 564
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A + + H G PD VTYN L+ + G +EA + R M + G
Sbjct: 565 PRRAIEMFETIKHSGIKPDG--------VTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 240 PDTVSYRQVISGLCKI 255
D ++Y ++ + +
Sbjct: 617 YDAITYSSILDAVGNV 632
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 38/337 (11%)
Query: 128 SVTYEVLIDNLCWVGR---LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
SV+ VL + + +GR +S+A +F + R P TY +++ +G+ K
Sbjct: 159 SVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK-CKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
++ EM ++G P +TY+ALI Y LGR A+ +F M + + P
Sbjct: 218 EVYTEMCNEG-------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI 270
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
Y ++ K+ + KA +L EM K+ C + Y TY+ LI
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEM-KRAGC---SPTVY-----------TYTELIKGLGK 315
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
G +++AY M DG D V L+ L+N L K+ R E +RC P
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC--TPTV 373
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
+ Y+T+I+ E K V ++ K M + P Y++LI + ++
Sbjct: 374 VSYNTVIKALF--ESKAHVSEVSSWFDK--------MKADSVSPSEFTYSILIDGYCKTN 423
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRY 461
V KA + EM GF P + +LI AL RY
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 220/523 (42%), Gaps = 90/523 (17%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VL+EM KGL E T + ++ + +E +A + F E+ G+ P TYNA++Q
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
AG E AL +L+EM E AD+V+Y ++ A + K +A + + M KG++P
Sbjct: 328 KAGVYTE-ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK--EAAGVIEMMTKKGVMP 384
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+++TY +ID G+ EA LF M G P+ TY +++ L G+ S++
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLS---LLGKKSRS--- 437
Query: 187 HHEMVHKGFLPDFVT-GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
+EM+ L D + G SP+ T+N ++ + G + +FR M G PD ++
Sbjct: 438 -NEMIK--MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 246 RQVISGLCKIREPVKAYELKLEMDKK--RSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+IS + V A ++ EM + +C++ TY++L+N
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVT-----------------TYNALLNALA 537
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN---------GLNKIA-RTTEAK----WY 349
+GD + M G+ + S++L G+ +I R E + W
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 350 LLWTVF---FRCFGM----------------PAYIIYDTLIEN-CSNNEFKRLVG----- 384
LL T+ F+C + P +I+++++ NN + + G
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 385 -------PAITFSVKVAI--------KAHH---TMLHGNYKPDGTVYNLLIFDHSRSLEV 426
+T++ + + KA T+ KPD YN +I R +
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 427 HKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIH 469
+A M EM G P +F+ + G + E+ VI
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE 760
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 199/487 (40%), Gaps = 79/487 (16%)
Query: 21 RTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILR 80
R YT ++H++ + + KA+ +F M + G SP+L TYN ++ G L +L
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 81 EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
EM +GL D + V+ A E L +A E ++ G P +VTY L+
Sbjct: 271 EMRSKGLKFDEFTCSTVLSA--CAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
G +EA + +EM D TY L+ Y G +A + M KG +P+
Sbjct: 329 AGVYTEALSVLKEM-EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN-- 385
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
+TY +I Y G+ EAL++F M E G P+T +Y V+S L K +
Sbjct: 386 ------AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 261 AYELKLEMDKKRSCLSLNEDTYETLMEQLS----------------------DEDTYSSL 298
+K+ D K + S N T+ T++ D DT+++L
Sbjct: 440 M--IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL-----------------NKIA 341
I+ Y G A ++ M G+ + T + LLN L +K
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 342 RTTEAKWYLLWTVFFRC---FGM-------------PAYIIYDTLIENCSNNEFKRLVGP 385
+ TE + L+ + + G+ P++++ TL+ +N + + L G
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL--LANFKCRALAGS 615
Query: 386 AITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHM 445
F++ K H YKPD ++N ++ +R+ +A + + G P +
Sbjct: 616 ERAFTL---FKKH------GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666
Query: 446 FSVLALI 452
+ +L+
Sbjct: 667 VTYNSLM 673
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 162/379 (42%), Gaps = 68/379 (17%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAV-KVFREMIDRGFSPSLDTYNAVIQT 64
++L +M G +P+ T+ ++ + C K V +VFREM GF P DT+N +I
Sbjct: 442 KMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI-- 498
Query: 65 NAFAGTGIEV-ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+A+ G EV A ++ EM G A +Y ++ AL + + G+ + DM KG
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE--NVISDMKSKG 556
Query: 124 ILPDSVTYEVL---------------IDNLCWVGRLSEAFDLFREML------------- 155
P +Y ++ I+N G++ ++ L R +L
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 156 ------HRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+ G+ PD + ++++ + + +A E + + D G SP LVT
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA-----EGILESIRED---GLSPDLVT 668
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
YN+L+ Y G +A EI + + + L PD VSY VI G C+ +A + EM
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 270 KK--RSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDN 327
++ R C+ TY++ ++ Y A G + + M + +
Sbjct: 729 ERGIRPCIF-----------------TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771
Query: 328 VTLSVLLNGLNKIARTTEA 346
+T ++++G + + +EA
Sbjct: 772 LTFKMVVDGYCRAGKYSEA 790
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 165/398 (41%), Gaps = 40/398 (10%)
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
VA ++L ++P + D +Y ++ A K KA ++ + M + G P VTY V
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAY--SRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 134 LIDNLCWVGR-LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
++D +GR + + EM +G DE T +++ +G +A E+
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKG-LKFDEFTCSTVLSACAREGLLREAKEFFAELKS 309
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
G+ P VTYNAL+ + G EAL + + M E D+V+Y ++++
Sbjct: 310 --------CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 253 CKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAY 312
+ +A + +EM K+ + + TY+++I+ Y G ++A
Sbjct: 362 VRAGFSKEAAGV-IEMMTKKGVMP--------------NAITYTTVIDAYGKAGKEDEAL 406
Query: 313 QLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIE 372
+L Y M G + + T + +L+ L K +R+ E L C P ++T++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC--SPNRATWNTMLA 464
Query: 373 NCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNM 432
C N + V + M ++PD +N LI + R A M
Sbjct: 465 LCGNKGMDKFVN-----------RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 433 YMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
Y EM GF + + AL+ AL G + VI +
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 14/245 (5%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
TEA VL+EM TY L+ ++ + + +A V M +G P+ TY V
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I AG E AL++ M E G + +Y V+ LL + + + +M DM
Sbjct: 393 IDAYGKAGKEDE-ALKLFYSMKEAGCVPNTCTYNAVLS--LLGKKSRSNEMIKMLCDMKS 449
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFD-LFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G P+ T+ ++ LC + + + +FREM GF PD T+ L++ Y G
Sbjct: 450 NGCSPNRATWNTML-ALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A ++ EM GF+ + TYNAL+ G + + M G P
Sbjct: 508 VDASKMYGEMTR--------AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 241 DTVSY 245
SY
Sbjct: 560 TETSY 564
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 158/365 (43%), Gaps = 34/365 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA V+E M KG+ P+ TYT +I ++ + + +A+K+F M + G P+ TYNAV+
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEK-LGKAFEMKKDMDD 121
E+ +++L +M G + + ++ ++ +K + + F ++M
Sbjct: 429 SLLGKKSRSNEM-IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF---REMKS 484
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G PD T+ LI G +A ++ EM R GF+ TY L+N +G++
Sbjct: 485 CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM-TRAGFNACVTTYNALLNALARKGDWR 543
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
++ +M K GF P+ +Y+ ++ Y G I + E + P
Sbjct: 544 SGENVISDMKSK--------GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 242 TVSYRQVISGLCKIREPV---------KAYELKLEMDKKRSCLSLNE-----DTYETLME 287
+ R ++ K R K + K +M S LS+ D E ++E
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 288 QLSDED------TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIA 341
+ ++ TY+SL++ Y+ +G+ KA ++ + D V+ + ++ G +
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 342 RTTEA 346
EA
Sbjct: 716 LMQEA 720
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQ----------ESR------------------ 35
E V+ +M KG P E +Y+ ++ + + E+R
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 36 ----------ASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGI-EVALEILREMPE 84
+ +A +F++ G+ P + +N+++ + F + + A IL + E
Sbjct: 605 ANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSML--SIFTRNNMYDQAEGILESIRE 659
Query: 85 RGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRL 144
GL+ D V+Y ++ + E KA E+ K ++ + PD V+Y +I C G +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGE--CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 145 SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS 204
EA + EM RG P TY ++ Y G F++ + M
Sbjct: 718 QEAVRMLSEMTERG-IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK--------NDCR 768
Query: 205 PSLVTYNALIYGYCSLGRVQEALE 228
P+ +T+ ++ GYC G+ EA++
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMD 792
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 154/364 (42%), Gaps = 43/364 (11%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT 70
M L+P+ T+TCLI +C+ AV +++EM S ++ TY A+I + F
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI--DGFCKK 246
Query: 71 G-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
G ++ A E+ M E + +++ Y +I + F K M ++G+ D
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK--MLNQGMRLDIT 304
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
Y V+I LC G+L EA ++ +M + PD + +MN Y G A +++H+
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDM-EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 190 MVHKGFLPDFVT------GFSPSL----------------VTYNALIYGYCSLGRVQEAL 227
++ +GF PD V G + + V Y LI C G E
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVE 423
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+F + E GL PD Y I+GLCK V A++LK M E L
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM------------VQEGL-- 469
Query: 288 QLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
L D Y++LI ++G + +A Q+ M + G D+ +L+ K A
Sbjct: 470 -LLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 348 WYLL 351
LL
Sbjct: 529 DLLL 532
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 208/539 (38%), Gaps = 76/539 (14%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
L + +G TPH ++ ++ C+ + A + M G P + +YN++I +
Sbjct: 44 LAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCR 103
Query: 68 AG--TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD---- 121
G + LE LR D VS+ L F K +D+
Sbjct: 104 NGDIRSASLVLESLRASHGFICKPDIVSF------------NSLFNGFSKMKMLDEVFVY 151
Query: 122 -----KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
K P+ VTY ID C G L A F M R SP+ T+ L++ YC
Sbjct: 152 MGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCK 210
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
G+ A L+ EM S ++VTY ALI G+C G +Q A E++ M E
Sbjct: 211 AGDLEVAVSLYKEMRR--------VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 237 GLSPDTVSYRQVISGLCK------------------IREPVKAYELKLE----MDKKRSC 274
+ P+++ Y +I G + +R + AY + + K +
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 275 LSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL 334
+ ED ++ + + D +++++N Y G ++ A + + + G+ D V LS ++
Sbjct: 323 TEIVEDMEKS--DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 335 NGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKV 393
+G+ K + EA Y C ++Y LI+ C +F ++V
Sbjct: 381 DGIAKNGQLHEAIVYF-------CIEKANDVMYTVLIDALCKEGDF-----------IEV 422
Query: 394 AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIK 453
+ + PD +Y I + + A+ + MV G + + + LI
Sbjct: 423 E-RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 454 ALHYDGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTALLDVLSEIAMDGLL 512
L G E V L S DS + +L + M A D+L ++ GL+
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 125/302 (41%), Gaps = 44/302 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M AEE+ M + P+ YT +I F Q + A+K +M+++G + Y
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I + G G ++ A EI+ +M + L D V + ++ A ++ A M +
Sbjct: 309 II--SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF--KSGRMKAAVNMYHKL 364
Query: 120 DDKGILPD------------------------------SVTYEVLIDNLCWVGRLSEAFD 149
++G PD V Y VLID LC G E
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVER 424
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
LF + + G PD+ Y + + C QG AF L MV +G L D L+
Sbjct: 425 LFSK-ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD--------LLA 475
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
Y LIYG S G + EA ++F M G+SPD+ + +I K A +L L+M
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQ 535
Query: 270 KK 271
++
Sbjct: 536 RR 537
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 183/439 (41%), Gaps = 62/439 (14%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + L + P T IH + ++K ++ RG++P ++N+V+
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI----------CALLLPPEEKLGKA 112
G ++ A +I+ MP G D +SY +I A L+ +
Sbjct: 64 SFVCKLGQ-VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
F K PD V++ L + + L E F ML SP+ TY ++
Sbjct: 123 FICK---------PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWID 171
Query: 173 CYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRG 232
+C GE A H M SP++VT+ LI GYC G ++ A+ +++
Sbjct: 172 TFCKSGELQLALKSFHSMKRDAL--------SPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 233 MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDE 292
M + +S + V+Y +I G CK E +A E+ Y ++E +
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRA-----------------EEMYSRMVEDRVEP 266
Query: 293 DT--YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
++ Y+++I+ + +GD + A + M + G D V+++GL + EA
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE-- 324
Query: 351 LWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDG 410
+ + +P +I+ T++ N FK + +K A+ +H ++ ++PD
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMM----NAYFK-------SGRMKAAVNMYHKLIERGFEPDV 373
Query: 411 TVYNLLIFDHSRSLEVHKA 429
+ +I +++ ++H+A
Sbjct: 374 VALSTMIDGIAKNGQLHEA 392
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 160/361 (44%), Gaps = 31/361 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+L+ + + GL P TY L+ + ++S AVKVF +M P L TYNA+I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G E A + E+ +G DAV+Y ++ A E K E+ + M G
Sbjct: 341 VYGRCGLAAE-AERLFMELELKGFFPDAVTYNSLLYAF--ARERNTEKVKEVYQQMQKMG 397
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
D +TY +I G+L A L+++M G +PD TY L++ +A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L EM+ G P+L TY+ALI GY G+ +EA + F M G PD +
Sbjct: 458 AALMSEMLD--------VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 244 SYRQVISGLCKIREPVKAYELKLEM--DKKRSCLSLNEDTYETLMEQLSDEDTYSSL--- 298
+Y ++ L + E KA+ L +M D +L E LM++ +D ++
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 299 ----------INDYLAQG---DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
I+ L +G DL A QL + +GY +N TL +L + R +E
Sbjct: 570 EELCGMNPLEISSVLVKGECFDL-AARQLKVAI-TNGYELENDTLLSILGSYSSSGRHSE 627
Query: 346 A 346
A
Sbjct: 628 A 628
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 156/382 (40%), Gaps = 40/382 (10%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSE--AFDLFREMLHRGGFSPDEH 165
K KA E+ M +G +PD +++ LI+ G L+ A +L +M+ G PD
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-DMVRNSGLRPDAI 298
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
TY L++ A + +M PD L TYNA+I Y G E
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD--------LWTYNAMISVYGRCGLAAE 350
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
A +F + G PD V+Y ++ + R K E+ +M K
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK--------------- 395
Query: 286 MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM-GHDGYLSDNVTLSVLLNGLNKIARTT 344
M DE TY+++I+ Y QG L+ A QL M G G D +T +VL++ L K RT
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 345 EAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHG 404
EA L + P Y LI C + + TFS ML
Sbjct: 456 EAA--ALMSEMLDVGIKPTLQTYSALI--CGYAKAGKREEAEDTFSC---------MLRS 502
Query: 405 NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
KPD Y++++ R E KA+ +Y +M+ G P +I L + R +++
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDI 562
Query: 465 SWVIHNTLRSCNLSDSELLKVL 486
I + C ++ E+ VL
Sbjct: 563 QKTIRDMEELCGMNPLEISSVL 584
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 159/356 (44%), Gaps = 36/356 (10%)
Query: 21 RTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN-AFAGTGIEVALEIL 79
+ Y ++ + + + SKA ++ M RG P L ++N +I G +A+E+L
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 80 REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLC 139
+ GL DA++Y ++ A + L A ++ +DM+ PD TY +I
Sbjct: 286 DMVRNSGLRPDAITYNTLLSA--CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
G +EA LF E L GF PD TY +L+ + + K ++ +M GF D
Sbjct: 344 RCGLAAEAERLFME-LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM-GLSPDTVSYRQVISGLCKIREP 258
+TYN +I+ Y G++ AL++++ M + G +PD ++Y +I L K
Sbjct: 403 --------MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
V+A L EM L+ TL TYS+LI Y G E+A M
Sbjct: 455 VEAAALMSEM--------LDVGIKPTL-------QTYSALICGYAKAGKREEAEDTFSCM 499
Query: 319 GHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG---MPAYIIYDTLI 371
G DN+ SV+L+ L + T +A W ++ P+Y +Y+ +I
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKA-----WGLYRDMISDGHTPSYTLYELMI 550
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 172/382 (45%), Gaps = 40/382 (10%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EAE + E+ KG P TY L+++F +E K +V+++M GF TYN +
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 62 IQTNAFAGTGIEVALEILREMPE-RGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I G +++AL++ ++M G DA++Y +I + L + +A + +M
Sbjct: 409 IHMYGKQGQ-LDLALQLYKDMKGLSGRNPDAITYTVLIDS--LGKANRTVEAAALMSEML 465
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
D GI P TY LI G+ EA D F ML R G PD Y +++ E
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML-RSGTKPDNLAYSVMLDVLLRGNET 524
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM-GLS 239
KA+ L+ +M+ G +PS Y +I G R + + R M E+ G++
Sbjct: 525 RKAWGLYRDMISD--------GHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMN 576
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
P +S ++ G C + A +LK+ + + YE + DT S++
Sbjct: 577 PLEIS-SVLVKGECF---DLAARQLKVAIT----------NGYEL------ENDTLLSIL 616
Query: 300 NDYLAQGDLEKAYQ-LDYVMGHDGYLSDNVT--LSVLLNGLNKIARTTEAKWYLLWTVFF 356
Y + G +A++ L+++ H +T L VL +N ++ + +++ V
Sbjct: 617 GSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALD-EYFADPCVHG 675
Query: 357 RCFGMPAYIIYDTLIENCSNNE 378
CFG + +Y+TL+ C NE
Sbjct: 676 WCFG--SSTMYETLLHCCVANE 695
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 20/297 (6%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+AE V+ + G TP +T+ L+ ++ Q +A +F M+ G SP++++ N ++
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DM 119
G +E ++ E+ + G +S ++ L+L + G FE+KK M
Sbjct: 830 HALCVDGR-LEELYVVVEELQDMGFK---ISKSSIL--LMLDAFARAGNIFEVKKIYSSM 883
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G LP Y ++I+ LC R+ +A + EM F + + +++ Y +
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLKMYTAIED 942
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+ K ++ + TG P TYN LI YC R +E + + M +GL
Sbjct: 943 YKKTVQVYQRIKE--------TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
P +Y+ +IS K + +A +L E+ K L L+ Y T+M+ D + S
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSK--GLKLDRSFYHTMMKISRDSGSDS 1049
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 18/272 (6%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E +++ M G P R Y +I C+ R A + EM + F L +N+++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 63 QTNAFAGTGIE---VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+ T IE +++ + + E GL D +Y +I ++ + + + + + + M
Sbjct: 935 KMY----TAIEDYKKTVQVYQRIKETGLEPDETTYNTLI--IMYCRDRRPEEGYLLMQQM 988
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ G+ P TY+ LI L +A LF E+L +G D Y +M G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGS 1047
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
SKA L M + G P+L T + L+ Y S G QEA ++ + + +
Sbjct: 1048 DSKAEKLLQMMKN--------AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
T+ Y VI + ++ E LEM K+
Sbjct: 1100 LTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+V + + GL P E TY LI +C++ R + + ++M + G P LDTY ++I +
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI--S 1005
Query: 66 AFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
AF +E A ++ E+ +GL D S+ H + + KA ++ + M + GI
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDR-SFYHTMMKISRDSGSD-SKAEKLLQMMKNAGI 1063
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
P T +L+ + G EA + L Y ++++ Y +++
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSN-LKDTEVELTTLPYSSVIDAYLRSKDYNSGI 1122
Query: 185 HLHHEMVHKGFLPD 198
EM +G PD
Sbjct: 1123 ERLLEMKKEGLEPD 1136
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 199/486 (40%), Gaps = 85/486 (17%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
G++P+ T I S C+ +RA+ A + +++ +NA++ + G +++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL---SCLGRNMDI 310
Query: 75 AL--EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEM------KKDMDDKGILP 126
+ +++ +M E + D V+ +I L ++ +A E+ K+ D I
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLC--KSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
DS+ + LID LC VGRL EA +L M P+ TY L++ YC G+ A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 187 HHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYGYCS 219
M P+ VT G ++VTY LI+ CS
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 220 LGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNE 279
+ V++A+ + M E G SPD Y +ISGLC++R + D R L E
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR---------DHDAIRVVEKLKE 539
Query: 280 DTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+ D Y+ LI + + + EK Y++ M +G D++T + L++ K
Sbjct: 540 GGFSL------DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 340 ------IARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSV 391
+ R E R G+ P Y +I+ CS E
Sbjct: 594 HKDFESVERMMEQ---------MREDGLDPTVTTYGAVIDAYCSVGELDE---------- 634
Query: 392 KVAIKAHHTM-LHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
A+K M LH P+ +YN+LI S+ +A ++ EM P++ + A
Sbjct: 635 --ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 451 LIKALH 456
L K L+
Sbjct: 693 LFKCLN 698
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 159/387 (41%), Gaps = 83/387 (21%)
Query: 1 MTEAEEVLEEM-YHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
+ EAEE+L M + P+ TY CLI +C+ + A +V M + P++ T N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMK 116
++ G+ +A+ +M + G+ + V+Y H C++ + KA
Sbjct: 446 TIV-GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV-----SNVEKAMYWY 499
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
+ M + G PD+ Y LI LC V R +A + E L GGFS D Y L+ +C
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV-EKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVT 209
+ K + + +M +G PD +T G P++ T
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGL----SPDTVSYRQVISGLCKIREPVKAYELK 265
Y A+I YCS+G + EAL++F+ +MGL +P+TV Y +I+ K+ +A LK
Sbjct: 619 YGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 266 LEMDKK----------------------------------RSCLSLNEDTYETLMEQLSD 291
EM K +SC N+ T E LME+LS
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC-EPNQITMEILMERLSG 734
Query: 292 EDTYSSL---INDYLAQGDLEKAYQLD 315
D L + Y EKA D
Sbjct: 735 SDELVKLRKFMQGYSVASPTEKASPFD 761
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 163/373 (43%), Gaps = 38/373 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREM----IDRGFSPSLD 56
++ +++ +M + P T LI++ C+ R +A++VF +M D G D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 57 T--YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE 114
+ +N +I G E ++R E +AV+Y +I KL A E
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG--KLETAKE 427
Query: 115 MKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+ M + I P+ VT ++ +C L+ A F +M + G + TY L++
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-EKEGVKGNVVTYMTLIHAC 486
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
C KA + + +M+ G SP Y ALI G C + R +A+ + +
Sbjct: 487 CSVSNVEKAMYWYEKMLE--------AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD---KKRSCLSLNE-----------D 280
E G S D ++Y +I C K YE+ +M+ KK ++ N +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 TYETLMEQLSDE------DTYSSLINDYLAQGDLEKAYQLDYVMG-HDGYLSDNVTLSVL 333
+ E +MEQ+ ++ TY ++I+ Y + G+L++A +L MG H + V ++L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 334 LNGLNKIARTTEA 346
+N +K+ +A
Sbjct: 659 INAFSKLGNFGQA 671
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 199/486 (40%), Gaps = 85/486 (17%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
G++P+ T I S C+ +RA+ A + +++ +NA++ + G +++
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL---SCLGRNMDI 310
Query: 75 AL--EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEM------KKDMDDKGILP 126
+ +++ +M E + D V+ +I L ++ +A E+ K+ D I
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLC--KSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
DS+ + LID LC VGRL EA +L M P+ TY L++ YC G+ A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 187 HHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYGYCS 219
M P+ VT G ++VTY LI+ CS
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 220 LGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNE 279
+ V++A+ + M E G SPD Y +ISGLC++R + D R L E
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR---------DHDAIRVVEKLKE 539
Query: 280 DTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+ D Y+ LI + + + EK Y++ M +G D++T + L++ K
Sbjct: 540 GGFSL------DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 340 ------IARTTEAKWYLLWTVFFRCFGM-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSV 391
+ R E R G+ P Y +I+ CS E
Sbjct: 594 HKDFESVERMMEQ---------MREDGLDPTVTTYGAVIDAYCSVGELDE---------- 634
Query: 392 KVAIKAHHTM-LHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLA 450
A+K M LH P+ +YN+LI S+ +A ++ EM P++ + A
Sbjct: 635 --ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 451 LIKALH 456
L K L+
Sbjct: 693 LFKCLN 698
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 163/373 (43%), Gaps = 38/373 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREM----IDRGFSPSLD 56
++ +++ +M + P T LI++ C+ R +A++VF +M D G D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 57 T--YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE 114
+ +N +I G E ++R E +AV+Y +I KL A E
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG--KLETAKE 427
Query: 115 MKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+ M + I P+ VT ++ +C L+ A F +M + G + TY L++
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-EKEGVKGNVVTYMTLIHAC 486
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
C KA + + +M+ G SP Y ALI G C + R +A+ + +
Sbjct: 487 CSVSNVEKAMYWYEKMLE--------AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD---KKRSCLSLNE-----------D 280
E G S D ++Y +I C K YE+ +M+ KK ++ N +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 281 TYETLMEQLSDE------DTYSSLINDYLAQGDLEKAYQLDYVMG-HDGYLSDNVTLSVL 333
+ E +MEQ+ ++ TY ++I+ Y + G+L++A +L MG H + V ++L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 334 LNGLNKIARTTEA 346
+N +K+ +A
Sbjct: 659 INAFSKLGNFGQA 671
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI-----Q 63
E+M G +P + Y LI CQ R A++V ++ + GFS L YN +I +
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
NA E E+L +M + G D+++Y +I + M + M + G
Sbjct: 560 NNA------EKVYEMLTDMEKEGKKPDSITYNTLIS--FFGKHKDFESVERMMEQMREDG 611
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P TY +ID C VG L EA LF++M +P+ Y L+N + G F +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNAL 213
L EM K P++ TYNAL
Sbjct: 672 LSLKEEMKMK--------MVRPNVETYNAL 693
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 221/502 (44%), Gaps = 50/502 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA+ V + + G P +YT L+ + + + + E+ G +NAVI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPE-EKLGKAFEMKKDMD 120
NAF+ +G +E A++ L +M E GL +Y +I + + E+ + ++ +
Sbjct: 123 --NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG 180
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ + P+ T+ VL+ C ++ EA+++ ++M G PD TY + CY +GE
Sbjct: 181 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGET 239
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A E+V K + + P+ T ++ GYC GRV++ L R M EM +
Sbjct: 240 VRA---ESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 241 DTVSYRQVISGLCKI--REPVKAYELKLEMDKKRSCLSLNEDT-----------YETLME 287
+ V + +I+G ++ R+ + L L + +S NE+ TLM+
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVTLTLLL------MSFNEEVELVGNQKMKVQVLTLMK 347
Query: 288 QL---SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTT 344
+ +D TYS+++N + + G +EKA Q+ M G D S+L G +
Sbjct: 348 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
Query: 345 EAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLH 403
+A+ LL T+ P +I+ T+I CSN S+ A++ + M
Sbjct: 408 KAE-ELLETLIVE--SRPNVVIFTTVISGWCSNG------------SMDDAMRVFNKMCK 452
Query: 404 GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
P+ + L++ + + KA + M G P + L L +A G +E
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Query: 464 MSWVIHNTLRSCNLSDSELLKV 485
+ I N L+ ++ ++L K+
Sbjct: 513 SNKAI-NALKCKDIEIAKLEKL 533
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 45/322 (13%)
Query: 6 EVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
EV+E+M K P+ RT ++ +C+E R ++ R M + +L +N++I
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI-- 302
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEE-KLGKAFEMKKD----M 119
N F +EV + D + + L+ EE +L +MK M
Sbjct: 303 NGF----VEV------------MDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLM 346
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ + D +TY +++ G + +A +F+EM+ + G PD H Y L Y E
Sbjct: 347 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-KAGVKPDAHAYSILAKGYVRAKE 405
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
KA L L + P++V + +I G+CS G + +A+ +F M + G+S
Sbjct: 406 PKKAEEL---------LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVS 456
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ------LSDED 293
P+ ++ ++ G ++++P KA E+ L+M R C E++ L+ + L+DE
Sbjct: 457 PNIKTFETLMWGYLEVKQPWKAEEV-LQM--MRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Query: 294 TYS--SLINDYLAQGDLEKAYQ 313
+ +L + LEK YQ
Sbjct: 514 NKAINALKCKDIEIAKLEKLYQ 535
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 154/367 (41%), Gaps = 60/367 (16%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRG---FSPSLDT 57
M +A + L +M GL P TY LI + + ++ ++ M++ G P++ T
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 58 YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSY-----CHVICALLLPPEEKLGKA 112
+N ++Q +E A E++++M E G+ D V+Y C+V + E ++ +
Sbjct: 191 FNVLVQAWC-KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR-------------------- 152
MK+ P+ T +++ C GR+ + R
Sbjct: 250 MVMKEKAK-----PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 153 --EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTY 210
E++ R G DE T L+ + + E + +++ + + ++TY
Sbjct: 305 FVEVMDRDGI--DEVTLTLLLMSFNEEVELVGNQKMKVQVLT--LMKE--CNVKADVITY 358
Query: 211 NALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK 270
+ ++ + S G +++A ++F+ M + G+ PD +Y + G + +EP KA EL
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL------ 412
Query: 271 KRSCLSLNEDTYETLM-EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
ETL+ E + ++++I+ + + G ++ A ++ M G + T
Sbjct: 413 -----------LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
Query: 330 LSVLLNG 336
L+ G
Sbjct: 462 FETLMWG 468
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 16/277 (5%)
Query: 25 CLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVAL-EILREMP 83
CLI + C S+ ++ ++ + +G P Y +I + F G + E+L M
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLI--SGFCEIGNYACMSEVLHTMI 275
Query: 84 ERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
Y +I L + +K +A+ + K++ DKG PD V Y +I C G
Sbjct: 276 AWNHFPSMYIYQKIIKGLCM--NKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 144 LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGF 203
L A L+ EM+ +G P+E Y +++ + +GE S ++EM+ G+
Sbjct: 334 LGSARKLWFEMIKKG-MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR--------NGY 384
Query: 204 SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE 263
++++ N +I G+CS G+ EA EIF+ M E G++P+ ++Y +I G CK + K
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG-- 442
Query: 264 LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
LKL + K L + Y L+ L D+ ++ +N
Sbjct: 443 LKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLN 479
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + + + KG P YT +I FC++ A K++ EMI +G P+ YN +I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ F I + EM G +S +I K +AFE+ K+M +
Sbjct: 361 HGH-FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC--SHGKSDEAFEIFKNMSET 417
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLM 171
G+ P+++TY LI C ++ + L++E L G P Y L+
Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKE-LKALGLKPSGMAYAALV 465
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 109/295 (36%), Gaps = 43/295 (14%)
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
TGF P + G V+EA+E++ + +MG+S V+ V+ G K R+
Sbjct: 138 TTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLD 197
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMG 319
+ +EL EM +E D + LI GD+ + Y+L
Sbjct: 198 RFWELHKEM-----------------VESEFDSERIRCLIRALCDGGDVSEGYELLKQGL 240
Query: 320 HDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNE 378
G + L++G +I L + + F P+ IY +I+ C N +
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF--PSMYIYQKIIKGLCMNKK 298
Query: 379 -------FKRLVGPA-----ITFSVKV-----------AIKAHHTMLHGNYKPDGTVYNL 415
FK L + ++ + A K M+ +P+ YN+
Sbjct: 299 QLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
+I H + E+ Y EM+ G+ M S +IK G+ +E + N
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E+ + M G+TP+ TY LI FC+E++ K +K+++E+ G PS Y A++
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Query: 63 QT 64
+
Sbjct: 466 RN 467
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ AE +L + G+ P TY LI + + +A V R M + G P + TYN+
Sbjct: 29 LERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNS 88
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-CALLLPPEEKLGKAFE-MKKD 118
+I + A + L++ EM GL+ D SY ++ C L + G+AF+ + +D
Sbjct: 89 LI-SGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG---RHGEAFKILHED 144
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+ G++P TY +L+D LC G A +LF+ + R P+ TY L+N C
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR--VKPELMTYNILINGLCKSR 202
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ E+ +G++P+ VTY ++ Y R+++ L++F M + G
Sbjct: 203 RVGSVDWMMRELKK--------SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
+ D + V+S L K +AYE E+ + + + D +Y++L
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT--------------RSQDIVSYNTL 300
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC 358
+N Y G+L+ L + G D+ T ++++NGL I T A+ +L C
Sbjct: 301 LNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL------AC 354
Query: 359 FG----MPAYIIYDTLIE 372
G P+ + + LI+
Sbjct: 355 IGEMGMQPSVVTCNCLID 372
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 34/314 (10%)
Query: 3 EAEEVLEEMYH-KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA ++L E H GL P TY L+ + C+ A+++F+ + R P L TYN +
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNIL 194
Query: 62 IQTNAFAGTGIEVALE-ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
I N + +++ ++RE+ + G T +AV+Y ++ + +++ K ++ M
Sbjct: 195 I--NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML--KMYFKTKRIEKGLQLFLKMK 250
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+G D ++ L GR EA++ E++ G S D +Y L+N Y G
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
L E+ KG PD T + ++ G ++G A + + EMG+ P
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYT--------HTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
V+ +I GLCK +A L M ++ DE TY+S+++
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASM-------------------EVRDEFTYTSVVH 403
Query: 301 DYLAQGDLEKAYQL 314
+ G L A +L
Sbjct: 404 NLCKDGRLVCASKL 417
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 130/337 (38%), Gaps = 42/337 (12%)
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
G S L+ N + C ++ A + +G+ PD ++Y +I G + +A
Sbjct: 10 GISTKLL--NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 262 YELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
Y + M E +E D TY+SLI+ L + QL M H
Sbjct: 68 YAVTRRMR-------------EAGIE--PDVTTYNSLISGAAKNLMLNRVLQLFDEMLHS 112
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCF--GMPAY-IIYDTLIENCSNNE 378
G D + + L++ K+ R EA L + G+ Y I+ D L ++ +
Sbjct: 113 GLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDN 172
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHG--------------------NYKPDGTVYNLLIF 418
L + VK + ++ +++G Y P+ Y ++
Sbjct: 173 AIELF-KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
+ ++ + K ++++M G+ F+ A++ AL GR E +H +RS S
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 479 -DSELLKVLNEIDFSKPEMTALLDVLSEIAMDGLLLD 514
D L + F + A+ D+L EI M GL D
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 147/370 (39%), Gaps = 52/370 (14%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EAE + EE+ G+ P R Y L+ + + A + EM RG SP TY+ +I
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
AG E A +L+EM + ++ + ++ E + K F++ K+M
Sbjct: 382 DAYVNAGRW-ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ--KTFQVLKEMKSI 438
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ PD Y V+ID L A F ML G PD T+ L++C+C G
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 183 AFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIY 215
A + M +G LP T G P++VT+ L+
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK---IREPVKAYELKLEMDKKR 272
Y GR +A+E M +GL P + Y +I+ + + V A+ + K
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
S L+LN SLIN + +A+ + M +G D VT +
Sbjct: 618 SLLALN------------------SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 333 LLNGLNKIAR 342
L+ L ++ +
Sbjct: 660 LMKALIRVDK 669
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 139/332 (41%), Gaps = 47/332 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +AE ++ EM +G++P E TY+ LI ++ R A V +EM P+ ++
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK------AF 113
++ F G + ++L+EM G+ D Y VI + GK A
Sbjct: 415 LLA--GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI--------DTFGKFNCLDHAM 464
Query: 114 EMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNC 173
M +GI PD VT+ LID C GR A ++F M RG P TY ++N
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL-PCATTYNIMINS 523
Query: 174 YCLQGEFSKAFHLHHEMVHKGFLPDFVT---------------------------GFSPS 206
Y Q + L +M +G LP+ VT G PS
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
YNALI Y G ++A+ FR M GL P ++ +I+ + R +A+ +
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
M K + + + TY TLM+ L D + +
Sbjct: 644 YM--KENGVKPDVVTYTTLMKALIRVDKFQKV 673
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 205/509 (40%), Gaps = 72/509 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKA--VKVFREMIDRGFSPSLDTY 58
+ +A ++ +M G Y+ +I S + ++ +++++E+ +
Sbjct: 213 IEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLV 272
Query: 59 NAVIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK- 116
N +I FA +G AL++L GL+A + +I AL G+ E +
Sbjct: 273 NDIIM--GFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL-----ADSGRTLEAEA 325
Query: 117 --KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+++ GI P + Y L+ G L +A + EM RG SPDEHTY L++ Y
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAY 384
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
G + A + EM P+ ++ L+ G+ G Q+ ++ + M
Sbjct: 385 VNAGRWESARIVLKEME--------AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED- 293
+G+ PD Y VI K +CL T++ ++ + + D
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKF-----------------NCLDHAMTTFDRMLSEGIEPDR 479
Query: 294 -TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
T+++LI+ + G A ++ M G L T ++++N R W
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER---------W 530
Query: 353 TVFFRCFG-------MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGN 405
R G +P + + TL++ + G + F+ AI+ M
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVD---------VYGKSGRFND--AIECLEEMKSVG 579
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE-- 463
KP T+YN LI +++ +A N + M G P + ++ +LI A D R E
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 464 --MSWVIHNTLRSCNLSDSELLKVLNEID 490
+ ++ N ++ ++ + L+K L +D
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+VL+EM G+ P + Y +I +F + + A+ F M+ G P T+N +I +
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
G I VA E+ M RG A +Y +I + +E+ + M +GIL
Sbjct: 490 CKHGRHI-VAEEMFEAMERRGCLPCATTYNIMINSY--GDQERWDDMKRLLGKMKSQGIL 546
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
P+ VT+ L+D GR ++A + EM G P Y L+N Y +G +A +
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 186 LHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALIYGYC 218
M G P + G P +VTY L+
Sbjct: 606 AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
+ + Q+ ++ M G PD + + S L +++ ++A
Sbjct: 666 RVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
+ +L +M +G+ P+ T+T L+ + + R + A++ EM G PS YNA+I
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI-- 591
Query: 65 NAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
NA+A G+ E A+ R M GL ++ +I A + + +AF + + M + G
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF--GEDRRDAEAFAVLQYMKENG 649
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+ PD VTY L+ L V + + ++ EM+ G PD
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM-SGCKPDRKA 691
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
AEE+ E M +G P TY +I+S+ + R ++ +M +G P++ T+ ++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPP-EEKLGKAFEMKKDMDDK 122
+G A+E L EM GL + Y +I A E+ AF + M
Sbjct: 558 VYGKSGR-FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV---MTSD 613
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ P + LI+ R +EAF + + M G PD TY LM +F K
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYM-KENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 183 AFHLHHEMVHKGFLPD 198
++ EM+ G PD
Sbjct: 673 VPVVYEEMIMSGCKPD 688
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A E LEEM GL P Y LI+++ Q + +AV FR M G PSL N++I
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 63 QTNAFAGTGIEV-ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
NAF + A +L+ M E G+ D V+Y ++ AL+ +K K + ++M
Sbjct: 627 --NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV--DKFQKVPVVYEEMIM 682
Query: 122 KGILPDSVTYEVL 134
G PD +L
Sbjct: 683 SGCKPDRKARSML 695
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
EV +EM +G++ +YT LI+++ + R ++++ M + SPS+ TYN VI
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK-KDMDDKGI 124
A G E L + EM G+ D V+Y ++ A + LG EM + M+D GI
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI---RGLGDEAEMVFRTMNDGGI 278
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
+PD TY L++ + RL + DL EM GG PD +Y L+ Y G +A
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS-GGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
+ H+M G +P+ TY+ L+ + GR + ++F M PD +
Sbjct: 338 GVFHQMQ--------AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 389
Query: 245 YRQVI 249
Y +I
Sbjct: 390 YNILI 394
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 203/487 (41%), Gaps = 60/487 (12%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVAL 76
P+E YT +I +E K ++VF EM +G S S+ +Y A+I NA+ G E +L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI--NAYGRNGRYETSL 196
Query: 77 EILREMPERGLTADAVSYCHVICALL---LPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
E+L M ++ ++Y VI A L E LG EM+ + GI PD VTY
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE----GIQPDIVTYNT 252
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
L+ G EA +FR M + GG PD TY +L+ + K L EM
Sbjct: 253 LLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG 311
Query: 194 GFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC 253
G LPD + +YN L+ Y G ++EA+ +F M G +P+ +Y +++
Sbjct: 312 GSLPD--------ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 254 KIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS---SLINDYLAQG---D 307
+ +L LEM K S + TY L+E + + +L +D + + D
Sbjct: 364 QSGRYDDVRQLFLEM--KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 308 LEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIY 367
+E + + G G D + + N I +++A +T FG A +Y
Sbjct: 422 METYEGIIFACGKGGLHEDARKILQYMTA-NDIVPSSKA-----YTGVIEAFGQAA--LY 473
Query: 368 DTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVH 427
+ A+ A +TM P ++ L++ +R V
Sbjct: 474 EE------------------------ALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 428 KAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRS-CNLSDSELLKVL 486
++ + +V G + + A I+A G++ E + +S C+ + L VL
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Query: 487 NEIDFSK 493
+ F++
Sbjct: 570 SVYSFAR 576
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 161/409 (39%), Gaps = 43/409 (10%)
Query: 67 FAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
FAG G + +L + + M +R + + + I LL E L K E+ +M +G+
Sbjct: 115 FAGRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVS 173
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG--EFSKA 183
+Y LI+ GR + +L M + SP TY ++N C +G ++
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEK-ISPSILTYNTVINA-CARGGLDWEGL 231
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L EM H+G PD +VTYN L+ G EA +FR M + G+ PD
Sbjct: 232 LGLFAEMRHEGIQPD--------IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLT 283
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y ++ K+R K +L EM S L D +Y+ L+ Y
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGS---------------LPDITSYNVLLEAYA 328
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPA 363
G +++A + + M G + T SVLLN + R + + L P
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT--DPD 386
Query: 364 YIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRS 423
Y+ LIE + G F K + H M+ N +PD Y +IF +
Sbjct: 387 AATYNILIE---------VFGEGGYF--KEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 424 LEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTL 472
A + M VP + +I+A Y E + V NT+
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE-ALVAFNTM 483
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 33/317 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EAE V M G+ P TY+ L+ +F + R K + EM G P + +YN ++
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DM 119
+ A +G+ I+ A+ + +M G T +A +Y ++LL + G+ ++++ +M
Sbjct: 325 EAYAKSGS-IKEAMGVFHQMQAAGCTPNANTY-----SVLLNLFGQSGRYDDVRQLFLEM 378
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
PD+ TY +LI+ G E LF +M+ PD TY ++ C +G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFA-CGKGG 436
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
HE K PS Y +I + +EAL F M E+G +
Sbjct: 437 L-------HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 240 PDTVSYRQVI-----SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
P ++ ++ GL K E + L +D S + N DT+ +E
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAI----LSRLVD---SGIPRNRDTFNAQIEAYKQGGK 542
Query: 295 YSSLINDYLAQGDLEKA 311
+ + Y+ D+EK+
Sbjct: 543 FEEAVKTYV---DMEKS 556
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 43/278 (15%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++L+EM G P+ TY LIHS+ + + ++A+ VF +M + G P TY +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALL----LPPEEKL------------ 109
A AG +++A+++ + M GL+ D +Y +I L LP KL
Sbjct: 445 AKAGF-LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 110 -----------------GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR 152
A ++ +DM + G PD VTY ++++ L G L EA +F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
EM + + PDE Y L++ + G KA+ + M+H G P++ T N+
Sbjct: 564 EMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH--------AGLRPNVPTCNS 614
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
L+ + + ++ EA E+ + M +GL P +Y ++S
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 148/361 (40%), Gaps = 38/361 (10%)
Query: 77 EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
++L EM G + V+Y +I + L +A + M + G PD VTY LID
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGR--ANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
G L A D+++ M GG SPD TY ++NC G A L EMV +G
Sbjct: 443 IHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC- 500
Query: 197 PDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS--GLCK 254
+P+LVTYN ++ + Q AL+++R M G PD V+Y V+ G C
Sbjct: 501 -------TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
E +A + EM +K + DE Y L++ + G++EKA+Q
Sbjct: 554 YLEEAEA--VFTEMQQK---------------NWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 315 DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENC 374
M H G + T + LL+ ++ + EA Y L P+ Y L+ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA--YELLQNMLALGLRPSLQTYTLLLSCC 654
Query: 375 SNNEFKRLVGPAITFSVKVAIKAHHTMLH-GNYKPDGT-----VYNLLIFDHSRSLEVHK 428
++ K +G AH +L PDG N L HS E +
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKR 714
Query: 429 A 429
Sbjct: 715 G 715
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TYT ++ + + + K+ EM+ G P+ TYN +I + A + A+ + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY-LNEAMNVFNQ 424
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M E G D V+YC +I + L A +M + M G+ PD+ TY V+I+ L
Sbjct: 425 MQEAGCKPDRVTYCTLI--DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
G L A LF EM+ + G +P+ TY +M+ + + A L+ +M + GF PD VT
Sbjct: 483 GHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 202 ---------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
+ P Y L+ + G V++A + ++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
GL P+ + ++S ++ + +AYEL M
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ + M GL+P TY+ +I+ + A K+F EM+D+G +P+L TYN ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-----CALLLPPEEKLGKAFEMKKD 118
+A A + AL++ R+M G D V+Y V+ C L EE A + +
Sbjct: 513 LHAKA-RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL---EE----AEAVFTE 564
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M K +PD Y +L+D G + +A+ ++ MLH G P+ T +L++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGLRPNVPTCNSLLSTFLRVN 623
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
+ ++A+ L M+ G PSL TY L+ C+ GR
Sbjct: 624 KIAEAYELLQNML--------ALGLRPSLQTY-TLLLSCCTDGR 658
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A F + + GF D HTY ++ +F L EMV G P+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD--------GCQPN 398
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
VTYN LI+ Y + EA+ +F M E G PD V+Y +I I ++ +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID----IHAKAGFLDIAM 454
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
+M ++ L+ DT+ TYS +IN G L A++L M G +
Sbjct: 455 DMYQRMQAGGLSPDTF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPA 386
VT +++++ L+ AR + L + F P + Y ++E + +
Sbjct: 504 LVTYNIMMD-LHAKARNYQNALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGY------- 554
Query: 387 ITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMF 446
++ A M N+ PD VY LL+ ++ V KA+ Y M+H G P++
Sbjct: 555 ----LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 447 SVLALIKALHYDGRYNEMSWVIHNTL 472
+ +L+ + E ++ N L
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 145/338 (42%), Gaps = 38/338 (11%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G D TY ++ NL + L EM+ R G P+ TY L++ Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A ++ ++M G PD VTY LI + G + A+++++ M GLSPDT
Sbjct: 418 AMNVFNQMQEAGCKPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+Y +I+ L K A++L EM + C + N TY +M+ + Y
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEM-VDQGC-TPNLVTYNIMMDLHAKARNY------- 520
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
+ A +L M + G+ D VT S+++ L EA+ ++T + +P
Sbjct: 521 ------QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE--AVFTEMQQKNWIP 572
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
+Y L++ L G A +V+ A + + MLH +P+ N L+ R
Sbjct: 573 DEPVYGLLVD---------LWGKA--GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
++ +AY + M+ G P + L+ + DGR
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSL-QTYTLLLSCCTDGR 658
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 43/278 (15%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++L+EM G P+ TY LIHS+ + + ++A+ VF +M + G P TY +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALL----LPPEEKL------------ 109
A AG +++A+++ + M GL+ D +Y +I L LP KL
Sbjct: 445 AKAGF-LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 110 -----------------GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR 152
A ++ +DM + G PD VTY ++++ L G L EA +F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
EM + + PDE Y L++ + G KA+ + M+H G P++ T N+
Sbjct: 564 EMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH--------AGLRPNVPTCNS 614
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
L+ + + ++ EA E+ + M +GL P +Y ++S
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 148/361 (40%), Gaps = 38/361 (10%)
Query: 77 EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
++L EM G + V+Y +I + L +A + M + G PD VTY LID
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGR--ANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
G L A D+++ M GG SPD TY ++NC G A L EMV +G
Sbjct: 443 IHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC- 500
Query: 197 PDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS--GLCK 254
+P+LVTYN ++ + Q AL+++R M G PD V+Y V+ G C
Sbjct: 501 -------TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
E +A + EM +K + DE Y L++ + G++EKA+Q
Sbjct: 554 YLEEAEA--VFTEMQQK---------------NWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 315 DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENC 374
M H G + T + LL+ ++ + EA Y L P+ Y L+ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA--YELLQNMLALGLRPSLQTYTLLLSCC 654
Query: 375 SNNEFKRLVGPAITFSVKVAIKAHHTMLH-GNYKPDGT-----VYNLLIFDHSRSLEVHK 428
++ K +G AH +L PDG N L HS E +
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKR 714
Query: 429 A 429
Sbjct: 715 G 715
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TYT ++ + + + K+ EM+ G P+ TYN +I + A + A+ + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY-LNEAMNVFNQ 424
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M E G D V+YC +I + L A +M + M G+ PD+ TY V+I+ L
Sbjct: 425 MQEAGCKPDRVTYCTLI--DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
G L A LF EM+ + G +P+ TY +M+ + + A L+ +M + GF PD VT
Sbjct: 483 GHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 202 ---------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
+ P Y L+ + G V++A + ++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
GL P+ + ++S ++ + +AYEL M
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ + M GL+P TY+ +I+ + A K+F EM+D+G +P+L TYN ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-----CALLLPPEEKLGKAFEMKKD 118
+A A + AL++ R+M G D V+Y V+ C L EE A + +
Sbjct: 513 LHAKA-RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL---EE----AEAVFTE 564
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M K +PD Y +L+D G + +A+ ++ MLH G P+ T +L++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGLRPNVPTCNSLLSTFLRVN 623
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
+ ++A+ L M+ G PSL TY L+ C+ GR
Sbjct: 624 KIAEAYELLQNML--------ALGLRPSLQTY-TLLLSCCTDGR 658
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A F + + GF D HTY ++ +F L EMV G P+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD--------GCQPN 398
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
VTYN LI+ Y + EA+ +F M E G PD V+Y +I I ++ +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID----IHAKAGFLDIAM 454
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
+M ++ L+ DT+ TYS +IN G L A++L M G +
Sbjct: 455 DMYQRMQAGGLSPDTF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPA 386
VT +++++ L+ AR + L + F P + Y ++E + +
Sbjct: 504 LVTYNIMMD-LHAKARNYQNALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGY------- 554
Query: 387 ITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMF 446
++ A M N+ PD VY LL+ ++ V KA+ Y M+H G P++
Sbjct: 555 ----LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 447 SVLALIKALHYDGRYNEMSWVIHNTL 472
+ +L+ + E ++ N L
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 38/338 (11%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G D TY ++ NL + L EM+ R G P+ TY L++ Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A ++ ++M G PD VTY LI + G + A+++++ M GLSPDT
Sbjct: 418 AMNVFNQMQEAGCKPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+Y +I+ L K A++L EM + C + N TY +M+ + Y + + Y
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEM-VDQGC-TPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
D++ A G+ D VT S+++ L EA+ ++T + +P
Sbjct: 528 R---DMQNA----------GFEPDKVTYSIVMEVLGHCGYLEEAE--AVFTEMQQKNWIP 572
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
+Y L++ L G A +V+ A + + MLH +P+ N L+ R
Sbjct: 573 DEPVYGLLVD---------LWGKA--GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
++ +AY + M+ G P + L+ + DGR
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSL-QTYTLLLSCCTDGR 658
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 43/278 (15%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++L+EM G P+ TY LIHS+ + + ++A+ VF +M + G P TY +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALL----LPPEEKL------------ 109
A AG +++A+++ + M GL+ D +Y +I L LP KL
Sbjct: 445 AKAGF-LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 110 -----------------GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR 152
A ++ +DM + G PD VTY ++++ L G L EA +F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
EM + + PDE Y L++ + G KA+ + M+H G P++ T N+
Sbjct: 564 EMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH--------AGLRPNVPTCNS 614
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
L+ + + ++ EA E+ + M +GL P +Y ++S
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 148/361 (40%), Gaps = 38/361 (10%)
Query: 77 EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
++L EM G + V+Y +I + L +A + M + G PD VTY LID
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGR--ANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
G L A D+++ M GG SPD TY ++NC G A L EMV +G
Sbjct: 443 IHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC- 500
Query: 197 PDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS--GLCK 254
+P+LVTYN ++ + Q AL+++R M G PD V+Y V+ G C
Sbjct: 501 -------TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
E +A + EM +K + DE Y L++ + G++EKA+Q
Sbjct: 554 YLEEAEA--VFTEMQQK---------------NWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 315 DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENC 374
M H G + T + LL+ ++ + EA Y L P+ Y L+ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA--YELLQNMLALGLRPSLQTYTLLLSCC 654
Query: 375 SNNEFKRLVGPAITFSVKVAIKAHHTMLH-GNYKPDGT-----VYNLLIFDHSRSLEVHK 428
++ K +G AH +L PDG N L HS E +
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKR 714
Query: 429 A 429
Sbjct: 715 G 715
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TYT ++ + + + K+ EM+ G P+ TYN +I + A + A+ + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY-LNEAMNVFNQ 424
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M E G D V+YC +I + L A +M + M G+ PD+ TY V+I+ L
Sbjct: 425 MQEAGCKPDRVTYCTLI--DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
G L A LF EM+ + G +P+ TY +M+ + + A L+ +M + GF PD VT
Sbjct: 483 GHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 202 ---------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
+ P Y L+ + G V++A + ++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
GL P+ + ++S ++ + +AYEL M
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ + M GL+P TY+ +I+ + A K+F EM+D+G +P+L TYN ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVI-----CALLLPPEEKLGKAFEMKKD 118
+A A + AL++ R+M G D V+Y V+ C L EE A + +
Sbjct: 513 LHAKA-RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL---EE----AEAVFTE 564
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M K +PD Y +L+D G + +A+ ++ MLH G P+ T +L++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGLRPNVPTCNSLLSTFLRVN 623
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
+ ++A+ L M+ G PSL TY L+ C+ GR
Sbjct: 624 KIAEAYELLQNML--------ALGLRPSLQTY-TLLLSCCTDGR 658
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 36/326 (11%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A F + + GF D HTY ++ +F L EMV G P+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD--------GCQPN 398
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
VTYN LI+ Y + EA+ +F M E G PD V+Y +I I ++ +
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID----IHAKAGFLDIAM 454
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
+M ++ L+ DT+ TYS +IN G L A++L M G +
Sbjct: 455 DMYQRMQAGGLSPDTF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPA 386
VT +++++ L+ AR + L + F P + Y ++E + +
Sbjct: 504 LVTYNIMMD-LHAKARNYQNALKLYRDMQNAGF-EPDKVTYSIVMEVLGHCGY------- 554
Query: 387 ITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMF 446
++ A M N+ PD VY LL+ ++ V KA+ Y M+H G P++
Sbjct: 555 ----LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 447 SVLALIKALHYDGRYNEMSWVIHNTL 472
+ +L+ + E ++ N L
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 38/338 (11%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G D TY ++ NL + L EM+ R G P+ TY L++ Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV-RDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A ++ ++M G PD VTY LI + G + A+++++ M GLSPDT
Sbjct: 418 AMNVFNQMQEAGCKPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+Y +I+ L K A++L EM + C + N TY +M+ + Y + + Y
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEM-VDQGC-TPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
D++ A G+ D VT S+++ L EA+ ++T + +P
Sbjct: 528 R---DMQNA----------GFEPDKVTYSIVMEVLGHCGYLEEAE--AVFTEMQQKNWIP 572
Query: 363 AYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
+Y L++ L G A +V+ A + + MLH +P+ N L+ R
Sbjct: 573 DEPVYGLLVD---------LWGKA--GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
++ +AY + M+ G P + L+ + DGR
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSL-QTYTLLLSCCTDGR 658
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 43/281 (15%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E ++L+EM G P+ TY LIHS+ + + +A+ VF +M + G P TY +I
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL----LPPEEKL-----GK-- 111
+A AG +++A+++ + M E GL+ D +Y +I L LP +L G+
Sbjct: 437 DIHAKAGF-LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 112 ----------------------AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD 149
A ++ +DM + G PD VTY ++++ L G L EA
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG 555
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+F EM R + PDE Y L++ + G KA+ + M+ G P++ T
Sbjct: 556 VFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ--------AGLRPNVPT 606
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
N+L+ + + R+ EA + + M +GL P +Y ++S
Sbjct: 607 CNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TYT ++ + + + + K+ EM+ G P+ TYN +I + A ++ A+ + +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY-LKEAMNVFNQ 419
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M E G D V+YC +I + L A +M + M + G+ PD+ TY V+I+ L
Sbjct: 420 MQEAGCEPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
G L A LF EM+ + G +P+ T+ ++ + + A L+ +M + GF PD VT
Sbjct: 478 GHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 202 -----------GF----------------SPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
GF P Y L+ + G V +A + ++ M
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAML 596
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
+ GL P+ + ++S ++ +AY L M
Sbjct: 597 QAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 36/308 (11%)
Query: 145 SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS 204
+ A F + + GF D HTY ++ +F + L EMV G
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC--------K 391
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
P+ VTYN LI+ Y ++EA+ +F M E G PD V+Y +I I ++
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLID----IHAKAGFLDI 447
Query: 265 KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
++M ++ L+ DT+ TYS +IN G L A++L M G
Sbjct: 448 AMDMYQRMQEAGLSPDTF-----------TYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVG 384
+ VT ++++ L+ AR E L + F P + Y ++E + F
Sbjct: 497 PNLVTFNIMI-ALHAKARNYETALKLYRDMQNAGF-QPDKVTYSIVMEVLGHCGF----- 549
Query: 385 PAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH 444
++ A M N+ PD VY LL+ ++ V KA+ Y M+ G P+
Sbjct: 550 ------LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPN 603
Query: 445 MFSVLALI 452
+ + +L+
Sbjct: 604 VPTCNSLL 611
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 211/488 (43%), Gaps = 47/488 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA+ V + + G P +YT L+ + + + + E+ G +NAVI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPE-EKLGKAFEMKKDMDD 121
+ +G +E A++ L +M E GL +Y +I + + E+ + ++ + +
Sbjct: 123 NAFSESGN-MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+ P+ T+ VL+ C ++ EA+++ ++M G PD TY + CY +GE
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGETV 240
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A E+V K + + P+ T ++ GYC GRV++ L R M EM + +
Sbjct: 241 RA---ESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN 294
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL---SDEDTYSSL 298
V + +I+G ++ MD+ D TLM++ +D TYS++
Sbjct: 295 LVVFNSLINGFVEV------------MDRD------GIDEVLTLMKECNVKADVITYSTV 336
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC 358
+N + + G +EKA Q+ M G D S+L G + +A+ LL T+
Sbjct: 337 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE-ELLETLIVE- 394
Query: 359 FGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
P +I+ T+I CSN S+ A++ + M P+ + L+
Sbjct: 395 -SRPNVVIFTTVISGWCSNG------------SMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Query: 418 FDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNL 477
+ + + KA + M G P + L L +A G +E + I N L+ ++
Sbjct: 442 WGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI-NALKCKDI 500
Query: 478 SDSELLKV 485
++L K+
Sbjct: 501 EIAKLEKL 508
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 158/389 (40%), Gaps = 85/389 (21%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRG---FSPSLDT 57
M +A + L +M GL P TY LI + + ++ ++ M++ G P++ T
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 58 YNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSY-----CHVICALLLPPEEKLGKA 112
+N ++Q +E A E++++M E G+ D V+Y C+V + E ++ +
Sbjct: 191 FNVLVQAWC-KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR-------------------- 152
MK+ P+ T +++ C GR+ + R
Sbjct: 250 MVMKEKAK-----PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 153 --EMLHRGGF------------SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
E++ R G D TY +MN + G KA + EMV G PD
Sbjct: 305 FVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 364
Query: 199 --------------------------FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRG 232
+ P++V + +I G+CS G + +A+ +F
Sbjct: 365 AHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 233 MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ---- 288
M + G+SP+ ++ ++ G ++++P KA E+ L+M R C E++ L+ +
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV-LQM--MRGCGVKPENSTFLLLAEAWRV 481
Query: 289 --LSDEDTYS--SLINDYLAQGDLEKAYQ 313
L+DE + +L + LEK YQ
Sbjct: 482 AGLTDESNKAINALKCKDIEIAKLEKLYQ 510
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 34/343 (9%)
Query: 6 EVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
++L+EM GL P + + +I F + + + V + G PSL +N+++
Sbjct: 97 QLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSIL-- 154
Query: 65 NAFAGTGIEVALEIL-REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ I++A E R+M G+ D +Y ++ L L ++G F++ + M G
Sbjct: 155 DVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSL--TNRIGDGFKLLQIMKTSG 212
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ P++V Y L+ LC G++ A L EM P++ T+ L++ YC + + ++
Sbjct: 213 VAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE-----PNDVTFNILISAYCNEQKLIQS 267
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L + GF+PD +VT ++ C+ GRV EALE+ + G D V
Sbjct: 268 MVLLEKCFSLGFVPD--------VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVV 319
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+ ++ G C + + A +EM++K L + +TY+ LI Y
Sbjct: 320 ACNTLVKGYCALGKMRVAQRFFIEMERK---------------GYLPNVETYNLLIAGYC 364
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
G L+ A M D + T + L+ GL+ RT +
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 161/401 (40%), Gaps = 89/401 (22%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
A ++ EM P++ T+ LI ++C E + +++ + + GF P + T V+
Sbjct: 235 RARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVM 290
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DM 119
+ G + ALE+L + +G D V+ C L+ LGK ++ +M
Sbjct: 291 EVLCNEGR-VSEALEVLERVESKGGKVDVVA-----CNTLVKGYCALGKMRVAQRFFIEM 344
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREM------------------LHRGGFS 161
+ KG LP+ TY +LI C VG L A D F +M L GG +
Sbjct: 345 ERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRT 404
Query: 162 PDEHTYFNLM--------------NC----------------YCLQGE--FSKAFHLHHE 189
D +M NC + L+ E F +A +
Sbjct: 405 DDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFK 464
Query: 190 MV---HKGFLPDFVTGFS--------PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
++ KG + D T + PS++ + LI+ Y G+++E+LE+ M G
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
P + ++ VI G CK DK + + ED E + D ++Y+ L
Sbjct: 525 LPRSSTFNAVIIGFCK-------------QDKVMNGIKFVEDMAER--GCVPDTESYNPL 569
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+ + +GD++KA+ L M + D S L+ L++
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQ 610
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 115/273 (42%), Gaps = 16/273 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M A+ EM KG P+ TY LI +C A+ F +M + T+N
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAV--SYCHVICALLLPPEEKLGKAFEMKKD 118
+I+ + G + L+IL M + A Y VI E + A E
Sbjct: 394 LIRGLSIGGR-TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFY--KENRWEDALEFLLK 450
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M+ + P +V + +LC G + + + +M+ GG P L++ Y G
Sbjct: 451 MEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV-PSIIVSHCLIHRYSQHG 507
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ ++ L ++MV +G+LP T+NA+I G+C +V ++ M E G
Sbjct: 508 KIEESLELINDMVTRGYLP--------RSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
PDT SY ++ LC + KA+ L M +K
Sbjct: 560 VPDTESYNPLLEELCVKGDIQKAWLLFSRMVEK 592
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 126/286 (44%), Gaps = 47/286 (16%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A+EV E M + TP +TY+ L+ + +E KA +VFREMID G P + TY+ ++
Sbjct: 221 KAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Query: 63 QTNAFAG----------------------------------TGIEVALEILREMPERGLT 88
AG +E A++ EM G+
Sbjct: 280 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMK 339
Query: 89 ADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
AD + +I A ++ + + K+M KG+ P+S + +++ +L G EAF
Sbjct: 340 ADVAVFNSLIGAFC--KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLV 208
D+FR+M+ PD TY ++ +C + E A + M KG P S+
Sbjct: 398 DVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP--------SMH 447
Query: 209 TYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
T++ LI G C Q+A + M EMG+ P V++ ++ L K
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK 493
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 36/333 (10%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
T+ ++ + + + +A+ F M P+L +N ++ + + A E+
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLL-SALCKSKNVRKAQEVFEN 228
Query: 82 MPERGLTADAVSYCHVICALLLP---PEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNL 138
M +R T D+ +Y ++LL E L KA E+ ++M D G PD VTY +++D L
Sbjct: 229 MRDR-FTPDSKTY-----SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDIL 282
Query: 139 CWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
C GR+ EA + R M P Y L++ Y + +A EM G D
Sbjct: 283 CKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341
Query: 199 FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
+ +N+LI +C R++ + + M G++P++ S ++ L + E
Sbjct: 342 --------VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEK 393
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVM 318
+A+++ +M K C D DTY+ +I + + ++E A ++ M
Sbjct: 394 DEAFDVFRKMIK--VC--------------EPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 319 GHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLL 351
G T SVL+NGL + RTT+ LL
Sbjct: 438 RKKGVFPSMHTFSVLINGLCE-ERTTQKACVLL 469
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 40/201 (19%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + EM G+ + LI +FC+ +R +V +EM +G +P+ + N
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
ILR + ERG EK +AF++ + M
Sbjct: 383 -----------------ILRHLIERG--------------------EK-DEAFDVFRKM- 403
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
K PD+ TY ++I C + A +++ M +G F P HT+ L+N C +
Sbjct: 404 IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF-PSMHTFSVLINGLCEERTT 462
Query: 181 SKAFHLHHEMVHKGFLPDFVT 201
KA L EM+ G P VT
Sbjct: 463 QKACVLLEEMIEMGIRPSGVT 483
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVF---REMIDRGFSPSLDTYNAVIQTNAFAGT 70
K P R YT L+ + + R + ++ R DR P TY V+ +AF
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVV--SAFVNA 465
Query: 71 GI-EVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFEMKKDM-DDKGIL 125
G+ + A ++L EM G+ A+ ++Y ++ C L ++ +A ++ ++M +D GI
Sbjct: 466 GLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQL-----QIDRAEDLLREMTEDAGIE 520
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD V+Y ++ID + + A F EM RG +P + +Y LM + + G+ A
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRG-IAPTKISYTTLMKAFAMSGQPKLANR 579
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
+ EM++ + L+ +N L+ GYC LG +++A + M E G P+ +Y
Sbjct: 580 VFDEMMNDPRV-------KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 246 RQVISGLCKIREPVKAYELKLEMDKK 271
+ +G+ + R+P A L E+ ++
Sbjct: 633 GSLANGVSQARKPGDALLLWKEIKER 658
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMI-DRGFSPSLDTYN 59
M A +VL EM G+ + TY L+ +C++ + +A + REM D G P + +YN
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 60 AVIQ----TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG-KAFE 114
+I + AG AL EM RG+ +SY ++ A + + KL + F+
Sbjct: 528 IIIDGCILIDDSAG-----ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFD 582
Query: 115 MKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+ M+D + D + + +L++ C +G + +A + M GF P+ TY +L N
Sbjct: 583 --EMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRM-KENGFYPNVATYGSLANGV 639
Query: 175 CLQGEFSKAFHLHHEM-----VHKGFLP-DFVTGFSPSLVTYNA----LIYGYCSLGR-V 223
+ A L E+ V K P D + +P ++ + + C
Sbjct: 640 SQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFF 699
Query: 224 QEALEIFRGMPEMGLSPDTVSYRQV 248
++ALEI M E G+ P+ Y+++
Sbjct: 700 KKALEIIACMEENGIPPNKTKYKKI 724
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 159/417 (38%), Gaps = 78/417 (18%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++ EEM P TY +I + R V V +ID+G + T ++++
Sbjct: 257 KLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVA-- 314
Query: 66 AFAGTG-IEVALEILREMPE-RGLTADAVSYCHVICALLLP------------------- 104
A+ G G + A I++ M E R + C+
Sbjct: 315 AYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGY 374
Query: 105 ------PEEKLGKAFE--MKKDMDDKG---ILP-----DSVTYEVLIDNLCWVGRLSEAF 148
EE + F+ + +D G +LP DS Y L+ GR+++
Sbjct: 375 SARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTA 434
Query: 149 DLFREMLHRGGFS--PDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
+ M + + PDE TY +++ + G +A + EM G +
Sbjct: 435 RMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR--------MGVPAN 486
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPE-MGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+TYN L+ GYC ++ A ++ R M E G+ PD VSY +I G I + A
Sbjct: 487 RITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFF 546
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLS-----------------------DEDTYSSLINDY 302
EM + ++ + +Y TLM+ + D ++ L+ Y
Sbjct: 547 NEM--RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGY 604
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWT-VFFRC 358
G +E A ++ M +G+ + T L NG+++ + +A LLW + RC
Sbjct: 605 CRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA--LLLWKEIKERC 659
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 206/498 (41%), Gaps = 55/498 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + + +G P TYT L+ + ++ + + ++ G P +NA+I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD-- 120
++ +G ++ A++I +M E G A ++ +I K+GK E + +D
Sbjct: 397 NASSESGN-LDQAMKIFEKMKESGCKPTASTFNTLIKGY-----GKIGKLEESSRLLDMM 450
Query: 121 --DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
D+ + P+ T +L+ C ++ EA+++ +M G PD T+ L Y G
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM-QSYGVKPDVVTFNTLAKAYARIG 509
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
A +M+ L + V P++ T ++ GYC G+++EAL F M E+G+
Sbjct: 510 STCTA----EDMIIPRMLHNKV---KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
P+ + +I G I +MD + L E+ D T+S+L
Sbjct: 563 HPNLFVFNSLIKGFLNIN----------DMDGVGEVVDLMEE-----FGVKPDVVTFSTL 607
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC 358
+N + + GD+++ ++ M G D S+L G + +A+ L R
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ---MRK 664
Query: 359 FGM-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLH-GNYKPDGTVYNL 415
FG+ P +IY +I CS E K+ A++ + M P+ T Y
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKK------------AMQVYKKMCGIVGLSPNLTTYET 712
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSC 475
LI+ + + KA + +M VP ++ + G N NTL S
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSND---ANTLGS- 768
Query: 476 NLSDSELLKVLNEIDFSK 493
+ S S L + N I S+
Sbjct: 769 SFSTSSKLNIPNNIASSR 786
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 62/307 (20%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
T + ++ M H + P+ RT +++ +C+E + +A++ F M + G P+L +N++
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 62 IQ----TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK 117
I+ N G G E++ M E G
Sbjct: 573 IKGFLNINDMDGVG-----EVVDLMEEFG------------------------------- 596
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+ PD VT+ L++ VG + +++ +ML GG PD H + L Y
Sbjct: 597 ------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE-GGIDPDIHAFSILAKGYARA 649
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM- 236
GE KA + ++M + F G P++V Y +I G+CS G +++A+++++ M +
Sbjct: 650 GEPEKAEQILNQM--RKF------GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK-----RSCLSLNEDTYETL-MEQLS 290
GLSP+ +Y +I G + ++P KA EL +M+ K R + L D ++++ + +
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSN 761
Query: 291 DEDTYSS 297
D +T S
Sbjct: 762 DANTLGS 768
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 199/455 (43%), Gaps = 48/455 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +V +EM H Y I +ESR A ++ +M GFS TY+ I
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFI- 86
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ ++ +L +M G D ++ + LL E K+G A + M +G
Sbjct: 87 SGLCKVKKFDLIDALLSDMETLGFIPDIWAF--NVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
PD V+Y +LI+ L G++++A +++ M+ R G SPD L+ C ++
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMI-RSGVSPDNKACAALVVGLC----HARK 199
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L +EMV + V S V YNALI G+C GR+++A + M ++G PD V
Sbjct: 200 VDLAYEMVAEEIKSARV---KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLV 256
Query: 244 SYRQVI-----SGLCKIREPVKAYELK--LEMDK-------KRSC-LSLNEDTYETLMEQ 288
+Y ++ + + K E V A ++ +++D KR C +S + Y ++++
Sbjct: 257 TYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE 316
Query: 289 LS-----DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIART 343
+ D +YS+LI + + KAY+L M G + + VT + L+ + +
Sbjct: 317 MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 344 TEAKWYLLWTVFFRCFGM-PAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTM 401
+ AK L G+ P I Y T++++ C + + G + M
Sbjct: 377 SVAKKLLDQMTE---LGLSPDRIFYTTILDHLCKSGNVDKAYG------------VFNDM 421
Query: 402 LHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEM 436
+ PD YN LI RS V +A ++ +M
Sbjct: 422 IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 138/326 (42%), Gaps = 35/326 (10%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
E V EE+ + Y LI FC+ R KA + M G P L TYN V+
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN-VLLN 263
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVI---CALLLPPEEKLGKAFE-MKKDMD 120
+ ++ A ++ EM G+ DA SY ++ C + P K + M K+M+
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD-----KCYNFMVKEME 318
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+G D V+Y LI+ C +A+ LF EM +G + TY +L+ + +G
Sbjct: 319 PRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKG-MVMNVVTYTSLIKAFLREGNS 376
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
S A L +M G SP + Y ++ C G V +A +F M E ++P
Sbjct: 377 SVAKKLLDQMTE--------LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D +SY +ISGLC+ +A +L +M K C DE T+ +I
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC---------------PDELTFKFIIG 473
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSD 326
+ L AY++ M G+ D
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 14/285 (4%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+AE + M G P TY L++ + + +A V EM+ G +YN ++
Sbjct: 238 KAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ + + +++EM RG D VSY +I + KA+ + ++M K
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTR--KAYRLFEEMRQK 354
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G++ + VTY LI G S A L +M G SPD Y +++ C G K
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL-GLSPDRIFYTTILDHLCKSGNVDK 413
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A+ + ++M+ PD ++YN+LI G C GRV EA+++F M PD
Sbjct: 414 AYGVFNDMIEHEITPD--------AISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDE 465
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
++++ +I GL + ++ AY++ +M K +L+ D +TL++
Sbjct: 466 LTFKFIIGGLIRGKKLSAAYKVWDQMMDKG--FTLDRDVSDTLIK 508
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A + EEM KG+ + TYT LI +F +E +S A K+ +M + G SP Y ++
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+G ++ A + +M E +T DA+SY +I L ++ +A ++ +DM K
Sbjct: 403 DHLCKSGN-VDKAYGVFNDMIEHEITPDAISYNSLISGLC--RSGRVTEAIKLFEDMKGK 459
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYC 175
PD +T++ +I L +LS A+ ++ +M+ + GF+ D L+ C
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK-GFTLDRDVSDTLIKASC 511
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 130/277 (46%), Gaps = 43/277 (15%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREM 82
Y+ L+ + + S+A ++F +M D+Y +++++ AG IE A+E+L ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE-AIEMLSKI 433
Query: 83 PERGLTADAVSYCHVICAL-LLPPEEKLGKAFE-MKKDMDDKGILPDSVTYEVLIDNLCW 140
E+G+ D + Y V AL L + FE MKKD G PD TY +LI +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD----GPSPDIFTYNILIASFGR 489
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
VG + EA ++F E L R PD +Y +L+NC G+ +A EM KG PD V
Sbjct: 490 VGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 201 T---------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGM 233
T G P++VTYN L+ GR EA++++ M
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Query: 234 PEMGLSPDTVSY------RQVISGLCKIRE--PVKAY 262
+ GL+PD+++Y + V G +IR P+ +
Sbjct: 609 KQQGLTPDSITYTVLERLQSVSHGKSRIRRKNPITGW 645
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 51/372 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A +V E+M + E TYT +I + + + +AV +F EMI G + ++ YN ++
Sbjct: 253 KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLM 312
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPE-EKLGKAFEMKKDMDD 121
Q A G ++ A+++ M E G + +Y ++ L+ + +L E+ K
Sbjct: 313 QVLA-KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMT 371
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+GI Y L+ L +G +SEA LF +M + +Y +++ C G+
Sbjct: 372 QGI------YSYLVRTLSKLGHVSEAHRLFCDMWS-FPVKGERDSYMSMLESLCGAGKTI 424
Query: 182 KAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNALI 214
+A + ++ KG + D + G SP + TYN LI
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSC 274
+ +G V EA+ IF + PD +SY +I+ L K + +A+ EM +K
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK--- 541
Query: 275 LSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL 334
LN D TYS+L+ + +E AY L M G + VT ++LL
Sbjct: 542 -GLNPDVV-----------TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 335 NGLNKIARTTEA 346
+ L K RT EA
Sbjct: 590 DCLEKNGRTAEA 601
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++ E+M G +P TY LI SF + +A+ +F E+ P + +YN++I N
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI--N 520
Query: 66 AFAGTG-IEVALEILREMPERGLTADAVSYCHVI-CALLLPPEEKLGKAFEMKKDMDDKG 123
G ++ A +EM E+GL D V+Y ++ C E++ A+ + ++M KG
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC---FGKTERVEMAYSLFEEMLVKG 577
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
P+ VTY +L+D L GR +EA DL+ +M + G +PD TY
Sbjct: 578 CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ-GLTPDSITY 620
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 196/483 (40%), Gaps = 76/483 (15%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY CL+ ++ + SKA V+ E+ G + YN ++ +A A E A ++ +
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLL--DALAKD--EKACQVFED 260
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKDMDDKGILPDSVTYEVLIDNL 138
M +R D +Y +++ ++GK A + +M +G+ + V Y L+ L
Sbjct: 261 MKKRHCRRDEYTY-----TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVL 315
Query: 139 CWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG---------EFSKAFHL--- 186
+ +A +F M+ G P+E+TY L+N +G E SK +
Sbjct: 316 AKGKMVDKAIQVFSRMVE-TGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI 374
Query: 187 ------------HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
H H+ F + +Y +++ C G+ EA+E+ +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED- 293
E G+ DT+ Y V S L K+++ +S D +E + + D
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQ-----------------ISHIHDLFEKMKKDGPSPDI 477
Query: 294 -TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
TY+ LI + G++++A + + D ++ + L+N L K EA ++ +
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA--HVRF 535
Query: 353 TVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTV 412
P + Y TL+E E V++A ML +P+
Sbjct: 536 KEMQEKGLNPDVVTYSTLMECFGKTE-----------RVEMAYSLFEEMLVKGCQPNIVT 584
Query: 413 YNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPH--MFSVLALIKALHYDG----RYNEMS- 465
YN+L+ ++ +A ++Y +M G P ++VL ++++ + R N ++
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRRKNPITG 644
Query: 466 WVI 468
WV+
Sbjct: 645 WVV 647
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + EE+ P +Y LI+ + +A F+EM ++G +P + TY+ ++
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 63 QTNAFAGT-GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKD 118
+ F T +E+A + EM +G + V+Y +LL EK G+ A ++
Sbjct: 555 E--CFGKTERVEMAYSLFEEMLVKGCQPNIVTY-----NILLDCLEKNGRTAEAVDLYSK 607
Query: 119 MDDKGILPDSVTYEVL 134
M +G+ PDS+TY VL
Sbjct: 608 MKQQGLTPDSITYTVL 623
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 13/238 (5%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P TY LIH Q A+K+F EM+ + P+ T+ +I + ++ AL+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIH-GLCKDSRVKEALK 208
Query: 78 ILREMPER-GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
+ +M + G+ Y +I AL E L AF++K + + I D+ Y LI
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGE--LSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
+L GR +E + EM +G PD TY L+N +C++ + A + EMV KG
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKG-CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLK 325
Query: 197 PDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
PD +++YN ++ + + + +EA +F MP G SPDT+SYR V GLC+
Sbjct: 326 PD--------VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 152/362 (41%), Gaps = 45/362 (12%)
Query: 162 PDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLG 221
PD TY L++ G F A L EMV K P TG VT+ LI+G C
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP---TG-----VTFGTLIHGLCKDS 201
Query: 222 RVQEALEIFRGMPEM-GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
RV+EAL++ M ++ G+ P Y +I LC+I E A++LK ++
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK-------------DE 248
Query: 281 TYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
YE ++ D YS+LI+ + G + + M G D VT +VL+NG +
Sbjct: 249 AYEGKIK--VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC-V 305
Query: 341 ARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHH- 399
+E+ +L + + P I Y+ ++ + F +K +A +
Sbjct: 306 ENDSESANRVLDEMVEKGLK-PDVISYNMIL--------------GVFFRIKKWEEATYL 350
Query: 400 --TMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
M PD Y ++ L+ +A + EM+ G+ P + ++ L
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Query: 458 DGRYNEMSWVIHNTLRSCNLSDSELLKVLNEIDFSKPEMTALLD-VLSEIAMDGLLLDGG 516
G+ +S VI + R D+++ V+ +P ++ +D +L+ + DG L
Sbjct: 411 SGKLEILSKVISSLHRGIA-GDADVWSVMIPTMCKEPVISDSIDLLLNTVKEDGPLSAMP 469
Query: 517 KC 518
+C
Sbjct: 470 QC 471
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
E +LEEM KG P TY LI+ FC E+ + A +V EM+++G P + +YN +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHV---ICALLLPPEEKLGKAFEMKKD 118
+ F E A + +MP RG + D +SY V +C L + +A + +
Sbjct: 335 LGV-FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGL-----QFEEAAVILDE 388
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M KG P E + LC G+L E LHR G + D + ++ C +
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKL-EILSKVISSLHR-GIAGDADVWSVMIPTMCKEP 446
Query: 179 EFSKAFHL 186
S + L
Sbjct: 447 VISDSIDL 454
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P + +Y +++S + V+++M++ GFSP + TYN ++ TN G ++
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK-MDRFDR 275
Query: 78 ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
+ EM G + D SY + I +L K A M + GI P + Y LID
Sbjct: 276 LFDEMARDGFSPD--SYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
L G L EA F + + + G PD Y ++ Y + GE KA + EM KG LP
Sbjct: 334 LSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
+ + TYN++I G C G +EA + + M G +P+ V Y ++S L K +
Sbjct: 393 N--------VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 258 PVKAYELKLEMDKK 271
+A ++ EM KK
Sbjct: 445 LSEARKVIREMVKK 458
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
E V ++M G +P TY L+ + + + + ++F EM GFSP TYN ++
Sbjct: 239 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 298
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
G AL L M E G+ + Y +I L + K F +M G
Sbjct: 299 LG-KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYF--LDEMVKAGC 355
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
PD V Y V+I G L +A ++FREM +G P+ TY +++ C+ GEF +A
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEFREAC 414
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG----LSP 240
L EM +G P+F V Y+ L+ G++ EA ++ R M + G L P
Sbjct: 415 WLLKEMESRGCNPNF--------VVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVP 466
Query: 241 DTVSYRQ 247
+ YR+
Sbjct: 467 KMMKYRR 473
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 122/288 (42%), Gaps = 22/288 (7%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+++EM G RT+ LI S + A +AV F + + P +YNA++ N
Sbjct: 170 RLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAIL--N 227
Query: 66 AFAGTGIEVALE-ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DMDD 121
+ G +E + ++M E G + D ++Y +LL +LGK + +M
Sbjct: 228 SLLGVKQYKLIEWVYKQMLEDGFSPDVLTY-----NILLWTNYRLGKMDRFDRLFDEMAR 282
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G PDS TY +L+ L + A M G P Y L++ G
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHM-KEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+ EMV G PD +V Y +I GY G + +A E+FR M G P+
Sbjct: 342 ACKYFLDEMVKAGCRPD--------VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN 393
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
+Y +I GLC E +A L EM+ R C + N Y TL+ L
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEME-SRGC-NPNFVVYSTLVSYL 439
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 27/326 (8%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
+Y L+ F + ++ EM+ GF + T+N +I + AG + ++ ++
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
SY ++ +LL + KL + + K M + G PD +TY +L+ +
Sbjct: 211 -KTFNYRPFKHSYNAILNSLLGVKQYKLIEW--VYKQMLEDGFSPDVLTYNILLWTNYRL 267
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT 201
G++ LF EM R GFSPD +TY L++ + G+ +K + H
Sbjct: 268 GKMDRFDRLFDEM-ARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMK-----EV 318
Query: 202 GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
G PS++ Y LI G G ++ M + G PD V Y +I+G E KA
Sbjct: 319 GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Query: 262 YELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
E+ EM T+ QL + TY+S+I G+ +A L M
Sbjct: 379 KEMFREM---------------TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAK 347
G + V S L++ L K + +EA+
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEAR 449
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 38/193 (19%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M + + +EM G +P TY L+H + ++ A+ M + G PS+ Y
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + AG +E L EM + G D V Y +I ++ E L KA EM ++M
Sbjct: 330 LIDGLSRAGN-LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE--LDKAKEMFREMT 386
Query: 121 DKGILPDSVTYEVLIDNLC---------WV--------------------------GRLS 145
KG LP+ TY +I LC W+ G+LS
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
Query: 146 EAFDLFREMLHRG 158
EA + REM+ +G
Sbjct: 447 EARKVIREMVKKG 459
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 136/325 (41%), Gaps = 37/325 (11%)
Query: 51 FSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG 110
F ++++Y+ +++ A G + ++ EM + G A ++ +IC+ E L
Sbjct: 145 FRHTVNSYHLLMKIFAECGE-YKAMWRLVDEMVQDGFPTTARTFNLLICSC---GEAGLA 200
Query: 111 KA----FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
K F K + + P +Y ++++L V + ++++ML GFSPD T
Sbjct: 201 KQAVVQFMKSKTFNYR---PFKHSYNAILNSLLGVKQYKLIEWVYKQMLE-DGFSPDVLT 256
Query: 167 YFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA 226
Y L+ G+ + L EM GF SP TYN L++ + A
Sbjct: 257 YNILLWTNYRLGKMDRFDRLFDEMARDGF--------SPDSYTYNILLHILGKGNKPLAA 308
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
L M E+G+ P + Y +I GL + ++A + L+ K C
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN-LEACKYFLDEMVKAGCRP---------- 357
Query: 287 EQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
D Y+ +I Y+ G+L+KA ++ M G L + T + ++ GL EA
Sbjct: 358 ----DVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 347 KWYLLWTVFFRCFGMPAYIIYDTLI 371
W L C P +++Y TL+
Sbjct: 414 CWLLKEMESRGC--NPNFVVYSTLV 436
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 37/248 (14%)
Query: 112 AFEMKKDMDDKGI-LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNL 170
AF + ++M GI P+S+TY L+D L R EA +LF +M+ + G SPD T+ +
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVM 274
Query: 171 MNCYCLQGEFSKAFHLHHEMVHKGFLPDFV--TGFSPSLVTYNALIYGYCSLGRVQEALE 228
+N +C GE +A K L DF+ G +P++ Y+AL+ G+C +G++QEA +
Sbjct: 275 INGFCRAGEVERA---------KKIL-DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQ 324
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ 288
F + + GL DTV Y +++ C+ E +A +L EM R C + + TY ++
Sbjct: 325 TFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR-CRA-DTLTYNVILRG 382
Query: 289 LSDE----------------------DTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
LS E +Y ++N G+LEKA + VM G
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPH 442
Query: 327 NVTLSVLL 334
+ T + L+
Sbjct: 443 HATWNELV 450
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 15/264 (5%)
Query: 3 EAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA E+ E+M K G++P T+ +I+ FC+ +A K+ M G +P++ Y+A+
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ N F G I+ A + E+ + GL D V Y ++ E +A ++ +M
Sbjct: 310 M--NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETD--EAMKLLGEMK 365
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
D++TY V++ L GR EA + + G ++ +Y ++N C GE
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQML-DQWGSEGVHLNKGSYRIILNALCCNGEL 424
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
KA M +G P T +N L+ C G + + + G +GL P
Sbjct: 425 EKAVKFLSVMSERGIWPHHAT--------WNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Query: 241 DTVSYRQVISGLCKIREPVKAYEL 264
S+ V+ +CK R+ V +EL
Sbjct: 477 GPKSWGAVVESICKERKLVHVFEL 500
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 24/225 (10%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ P++ + +L+ + C G ++ AF + EM G P+ TY LM+C +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L +M+ K G SP VT+N +I G+C G V+ A +I M + G +P+
Sbjct: 251 AVELFEDMISK-------EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDK-KRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
+Y +++G CK+ K E K D+ K++ L L D Y++L+N
Sbjct: 304 YNYSALMNGFCKVG---KIQEAKQTFDEVKKTGLKL-------------DTVGYTTLMNC 347
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ G+ ++A +L M +D +T +V+L GL+ R+ EA
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 54/274 (19%)
Query: 115 MKKDMDDKGILP-------------DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFS 161
MK++ D +G+L ++ TY VL+DNL + F +LH+ +
Sbjct: 63 MKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLV----RHKKFLAVDAILHQMKYE 118
Query: 162 P---DEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYC 218
E + NLM FS++ LH +++ L + PSL + +
Sbjct: 119 TCRFQESLFLNLMR------HFSRS-DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171
Query: 219 SLGRVQEALEIFR-GMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSL 277
G V + ++ +GL P+T + ++ CK + A+ + EM KRS +S
Sbjct: 172 DSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEM--KRSGISY 229
Query: 278 -NEDTYETLMEQL-----------------------SDEDTYSSLINDYLAQGDLEKAYQ 313
N TY TLM+ L D T++ +IN + G++E+A +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 314 LDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
+ M +G + S L+NG K+ + EAK
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 17/241 (7%)
Query: 18 PHERTYTCLIHSFCQ--ESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEV 74
P T+ L+ C+ +S S +V M++ G P D I + TG ++
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEP--DQVTTDIAVRSLCETGRVDE 177
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM-DDKGILPDSVTYEV 133
A ++++E+ E+ D +Y ++ L + L +E +M DD + PD V++ +
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCK--CKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
LIDN+C L EA L + L GF PD Y +M +C + S+A ++ +M +
Sbjct: 236 LIDNVCNSKNLREAMYLVSK-LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 194 GFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC 253
G PD +TYN LI+G GRV+EA + M + G PDT +Y +++G+C
Sbjct: 295 GVEPD--------QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 254 K 254
+
Sbjct: 347 R 347
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 105 PEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDE 164
P+ + + M + G+ PD VT ++ + +LC GR+ EA DL +E+ + PD
Sbjct: 136 PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDT 194
Query: 165 HTYFNLMN--CYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
+TY L+ C C K H+ +E V + DF P LV++ LI C+
Sbjct: 195 YTYNFLLKHLCKC------KDLHVVYEFVDE-MRDDF--DVKPDLVSFTILIDNVCNSKN 245
Query: 223 VQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTY 282
++EA+ + + G PD Y ++ G C + + +A + +M E+
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM---------KEEGV 296
Query: 283 ETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
E D+ TY++LI G +E+A M GY D T + L+NG+
Sbjct: 297 E------PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 38/280 (13%)
Query: 141 VGRLSEAFDLFREMLH-RGGFSPDEHTYFNLMN--CYCLQGEFSKAFHLHHEMVHKGFLP 197
+ +++ LF+ +L + F P T+ L++ C S + + MV+ G P
Sbjct: 98 IAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEP 157
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
D VT + + C GRV EA ++ + + E PDT +Y ++ LCK ++
Sbjct: 158 D--------QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 258 PVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYV 317
YE EM D ++ + +S ++ LI++ +L +A L
Sbjct: 210 LHVVYEFVDEM----------RDDFDVKPDLVS----FTILIDNVCNSKNLREAMYLVSK 255
Query: 318 MGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNN 377
+G+ G+ D + ++ G +++ +EA ++ P I Y+TLI
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGVEPDQITYNTLI------ 307
Query: 378 EFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
G + V+ A TM+ Y+PD Y L+
Sbjct: 308 -----FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 131/301 (43%), Gaps = 60/301 (19%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT-NAFA 68
EM +G + T+ +I + + + A++ F+EM D G PS T+ +I
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 69 GTGIEVALEILREM------PERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
G +E A REM P+R L D Y +C ++G + K +D
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQD---YLGCLC--------EVGNTKDAKSCLDSL 811
Query: 123 GIL--PDSVTYEVLIDNLCWVGRLSEA------FDLFREMLHRGGFSPDEHTYFNLMNCY 174
G + P +V Y + I LC +G+L EA F+ R +L D++TY ++++
Sbjct: 812 GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL-------DQYTYGSIVHGL 864
Query: 175 CLQGEFSKAFHLHHEMVHKGFLP------DFVTGF---------------------SPSL 207
+G+ KA + M G P + F PS+
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
Query: 208 VTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLE 267
VTY A+I GY SLG+V+EA FR M E G SPD +Y + I+ LC+ + A +L E
Sbjct: 925 VTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSE 984
Query: 268 M 268
M
Sbjct: 985 M 985
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
+E++ EM G RT+T LI + + + K + VF +M GF YN +I++
Sbjct: 209 DELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRS 268
Query: 65 NAFAGTGIEVALEILREMPERGLT--------------------------ADAVSYC--- 95
AG G ++ALE +EM E+G+T D V C
Sbjct: 269 LCIAGRG-DLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 96 -HVICALLLPP---EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLF 151
H LL K+ +A E+ +++ +K + D+ +E+L+ LC R+ +A ++
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV 387
Query: 152 REMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYN 211
M R D + Y +++ Y Q + SKA E++ K +G P + TY
Sbjct: 388 DIMKRRK--LDDSNVYGIIISGYLRQNDVSKALE-QFEVIKK-------SGRPPRVSTYT 437
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
++ L + ++ +F M E G+ PD+V+ V++G +A+++ M++K
Sbjct: 438 EIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEK 497
Query: 272 RSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ +Y +++L Y +I
Sbjct: 498 --GIKPTWKSYSIFVKELCRSSRYDEIIK 524
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 163/415 (39%), Gaps = 76/415 (18%)
Query: 50 GFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKL 109
GFS + YN ++ A +++ E++ EM + G D ++ +I + +K+
Sbjct: 184 GFSHRVGIYNTMLSI-AGEARNLDMVDELVSEMEKNGCDKDIRTWTILIS--VYGKAKKI 240
Query: 110 GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFN 169
GK + + M G D+ Y ++I +LC GR A + ++EM+ +G + TY
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG-ITFGLRTYKM 299
Query: 170 LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
L++C + + +MV + + + L+ +C G+++EALE+
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDA--------FGYLLKSFCVSGKIKEALEL 351
Query: 230 FRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
R + + D + ++ GLC+ V A E+ +++ K+R +L
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI-VDIMKRR---------------KL 395
Query: 290 SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWY 349
D + Y +I+ YL Q D+ KA + V+ G T + ++ L K+ + +
Sbjct: 396 DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKG--- 452
Query: 350 LLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPD 409
C +++ +IEN +PD
Sbjct: 453 --------CN------LFNEMIEN-------------------------------GIEPD 467
Query: 410 GTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEM 464
++ H V +A+ ++ M G P S +K L RY+E+
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEI 522
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E +EM KG+T RTY L+ + + + +M+ D + +++
Sbjct: 278 ALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLK 337
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ +G I+ ALE++RE+ + + DA Y ++ L ++ A E+ D+ +
Sbjct: 338 SFCVSGK-IKEALELIRELKNKEMCLDA-KYFEILVKGLCRA-NRMVDALEI-VDIMKRR 393
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
L DS Y ++I +S+A + F E++ + G P TY +M +F K
Sbjct: 394 KLDDSNVYGIIISGYLRQNDVSKALEQF-EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKG 452
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+L +EM+ G PD V A++ G+ RV EA ++F M E G+ P
Sbjct: 453 CNLFNEMIENGIEPDS--------VAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWK 504
Query: 244 SYRQVISGLCK 254
SY + LC+
Sbjct: 505 SYSIFVKELCR 515
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLD--TYNAVIQTNAFAGTGIEVA 75
P Y+ I + C+ + +A+ G LD TY +++ G ++ A
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASF--EGERSLLDQYTYGSIVHGLLQRGD-LQKA 873
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
L+ + M E G Y +I E++L K E + M+ + P VTY +I
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFF--KEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
+G++ EA++ FR M RG SPD TY +NC C + A L EM+ K
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGT-SPDFKTYSKFINCLCQACKSEDALKLLSEMLDK-- 988
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGR 222
G +PS + + + YG G+
Sbjct: 989 ------GIAPSTINFRTVFYGLNREGK 1009
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 44/258 (17%)
Query: 117 KDMDDKGILPDSVTYEVLIDNLC-WVGR-LSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
K+M D G++P S T++ LI LC GR + EA FREM+ R GF PD + + C
Sbjct: 737 KEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMI-RSGFVPDRELVQDYLGCL 795
Query: 175 CLQGEFSKAFHLHHEMVHKGF------------------LPDFVTGFSP-----SLV--- 208
C G A + GF L + ++ + SL+
Sbjct: 796 CEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY 855
Query: 209 TYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
TY ++++G G +Q+AL+ M E+G P Y +I K ++ K E
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE----- 910
Query: 269 DKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV 328
+C + ++ E + TY+++I Y++ G +E+A+ M G D
Sbjct: 911 ----TCQKMEGESCEPSVV------TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 329 TLSVLLNGLNKIARTTEA 346
T S +N L + ++ +A
Sbjct: 961 TYSKFINCLCQACKSEDA 978
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 37/261 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A E+++ M + L Y +I + +++ SKA++ F + G P + TY
Sbjct: 380 MVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTE 438
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++Q + F E + EM E G+ D+V+ V+ L + ++ +A+++ M+
Sbjct: 439 IMQ-HLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL--GQNRVAEAWKVFSSME 495
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREM------------------LHRGGFSP 162
+KGI P +Y + + LC R E +F +M + + G
Sbjct: 496 EKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKE 555
Query: 163 DEHTYFNLM---NCYC--LQGEFSKAFHLHHEMVHKGFLPDFV--TGFSPSLVTYNAL-I 214
H + N YC L G F E+V P V + P+L + + +
Sbjct: 556 KIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDV 615
Query: 215 YGYCSL-------GRVQEALE 228
C + R QEALE
Sbjct: 616 QEICRVLSSSRDWERTQEALE 636
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 7/157 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A + + M G P YT LI F +E + K ++ ++M PS+ TY A
Sbjct: 870 LQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTA 929
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I G +E A R M ERG + D +Y I L + + A ++ +M
Sbjct: 930 MICGYMSLGK-VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSE--DALKLLSEML 986
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR 157
DKGI P ++ + + L G+ DL R L +
Sbjct: 987 DKGIAPSTINFRTVFYGLNREGK----HDLARIALQK 1019
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P++ +Y ++HS + V+ +M++ GF+P + TYN V+ N G +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK-TDRLYR 278
Query: 78 ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
+L EM + G + D +Y +++ L + L A + M + G+ P + + LID
Sbjct: 279 LLDEMVKDGFSPDLYTY-NILLHHLATGNKPLA-ALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
L G+L EA F + + G +PD Y ++ Y GE KA + EM KG LP
Sbjct: 337 LSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
+ + TYN++I G+C G+ +EA + + M G +P+ V Y +++ L +
Sbjct: 396 N--------VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 258 PVKAYELKLEMDKK 271
++A+E+ +M +K
Sbjct: 448 VLEAHEVVKDMVEK 461
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
V E+M G TP TY ++ + + + + ++ EM+ GFSP L TYN ++ A
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK---G 123
G AL +L M E G+ + + +I L + GK K MD+ G
Sbjct: 304 -TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL-----SRAGKLEACKYFMDETVKVG 357
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
PD V Y V+I G L +A ++F+EM +G P+ TY +++ +C+ G+F +A
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL-PNVFTYNSMIRGFCMAGKFKEA 416
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
L EM +G P+FV Y+ L+ + G+V EA E+ + M E G
Sbjct: 417 CALLKEMESRGCNPNFVV--------YSTLVNNLKNAGKVLEAHEVVKDMVEKG------ 462
Query: 244 SYRQVISGLCKIRE 257
Y +IS L K R
Sbjct: 463 HYVHLISKLKKYRR 476
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 20/289 (6%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+++EM G T+ LI + + A V+ F + + P +YNA++ +
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS- 231
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKA---FEMKKDMDDK 122
++ + +M E G T D ++Y V+ A +LGK + + +M
Sbjct: 232 LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF-----RLGKTDRLYRLLDEMVKD 286
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD TY +L+ +L + A +L M G P + L++ G+
Sbjct: 287 GFSPDLYTYNILLHHLATGNKPLAALNLLNHM-REVGVEPGVIHFTTLIDGLSRAGKLEA 345
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ E V G PD +V Y +I GY S G +++A E+F+ M E G P+
Sbjct: 346 CKYFMDETVKVGCTPD--------VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD 291
+Y +I G C + +A L EM+ R C + N Y TL+ L +
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEME-SRGC-NPNFVVYSTLVNNLKN 444
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 29/320 (9%)
Query: 27 IHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERG 86
I + C E +A ++ EMI G+ + T+N +I T AG +V + ++
Sbjct: 161 IFAECGEYKA--MCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS-KTFN 217
Query: 87 LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSE 146
SY ++ +LL + KL + + M + G PD +TY +++ +G+
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDW--VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDR 275
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
+ L EM+ + GFSPD +TY L++ + A +L + M G P
Sbjct: 276 LYRLLDEMV-KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE--------VGVEPG 326
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
++ + LI G G+++ ++G +PD V Y +I+G E KA E+
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
EM +K QL + TY+S+I + G ++A L M G +
Sbjct: 387 EMTEK---------------GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 327 NVTLSVLLNGLNKIARTTEA 346
V S L+N L + EA
Sbjct: 432 FVVYSTLVNNLKNAGKVLEA 451
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASK--AVKVFR-EMIDRGFSPSLDTYNA 60
A +L M G+ P +T LI SRA K A K F E + G +P + Y
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGL---SRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I T +G +E A E+ +EM E+G + +Y +I + K +A + K+M+
Sbjct: 368 MI-TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAG--KFKEACALLKEME 424
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRG 158
+G P+ V Y L++NL G++ EA ++ ++M+ +G
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +AEE+ +EM KG P+ TY +I FC + +A + +EM RG +P+ Y+
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICAL 101
++ AG +E A E++++M E+G Y H+I L
Sbjct: 438 LVNNLKNAGKVLE-AHEVVKDMVEKG------HYVHLISKL 471
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 200/498 (40%), Gaps = 100/498 (20%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+V +EM G + T+ +I+SFC+ES+ +A+ VF M+ G P++ ++N +I
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
G + AL++L +M G+ M +
Sbjct: 264 CKTGD-MRFALQLLGKM---GM-------------------------------MSGNFVS 288
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
P++VTY +I+ C GRL A + +M+ + G +E TY L++ Y G +A
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMV-KSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
L EM KG + + V YN+++Y G ++ A+ + R M + D +
Sbjct: 348 LCDEMTSKGLVVN--------TVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ 399
Query: 246 RQVISGLCKIREPVKAYELKLEM---------------------DKKRSCLSLNEDTYET 284
V+ GLC+ +A E + ++ DKK +C ++
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLAC--ADQILGSM 457
Query: 285 LMEQLS-DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIART 343
L++ LS D ++ +LI+ YL +G LE+A ++ M S+ V + ++NGL+K
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 344 TEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSN-----------NEFKRLVGPAITFSVK 392
A+ + + Y+TL+ ++ ++ G V
Sbjct: 518 GAAE------AVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVT 571
Query: 393 VAIKAHHTMLHGNYK---------------PDGTVYNLLIFDHSRSLEVHKAYNMYMEMV 437
I +H G+Y+ PD Y LI S+ K ++ ++
Sbjct: 572 FNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLI 631
Query: 438 HYGFVPHMFSVLALIKAL 455
G PH L++++ L
Sbjct: 632 LQGVTPHEHIYLSIVRPL 649
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 148/336 (44%), Gaps = 29/336 (8%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
AE + +M G+ +ERTY L+ ++ + + +A+++ EM +G + YN+++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
F IE A+ +LR+M + + D + V+ L K +A E ++ + +K
Sbjct: 370 W-LFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK--EAVEFQRQISEKK 426
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
++ D V + L+ + +L+ A + ML + G S D ++ L++ Y +G+ +A
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ-GLSLDAISFGTLIDGYLKEGKLERA 485
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
++ M+ + +LV YN+++ G G A + M D V
Sbjct: 486 LEIYDGMIK--------MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIV 533
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYL 303
+Y +++ K +A ++ +M K+ E+ T++ +IN
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDG-------------EKSVSLVTFNIMINHLC 580
Query: 304 AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
G EKA ++ M G + D++T L+ +K
Sbjct: 581 KFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + +EM KGL + Y +++ E A+ V R+M + +D + I
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ--IDRFTQAI 401
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
G ++ A+E R++ E+ L D V CH ++KL A ++ M
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIV--CHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREM------------------LHRGGFS-- 161
+G+ D++++ LID G+L A +++ M L + G +
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGA 519
Query: 162 ----------PDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYN 211
D TY L+N G +A + +M + S SLVT+N
Sbjct: 520 AEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEK------SVSLVTFN 573
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
+I C G ++A E+ + M E G+ PD+++Y +I+ K R K EL
Sbjct: 574 IMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 37/338 (10%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSP--SLDTYNAVIQTNAFAGT--G 71
L +R + L H F +V RE SP +L+ YN V+++N A +
Sbjct: 38 LNLRQRRWNTL-HQFSSSLTNPLISRVLREFRS---SPKLALEFYNWVLRSNTVAKSENR 93
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK---KDMDDKGILPDS 128
E + ++ + DA+S ++ L+ EKL + + G PD
Sbjct: 94 FEASCVMIHLLVGSRRFDDALS---IMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPD- 149
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
++ L+ G A+++ E GF H N M C E + + ++
Sbjct: 150 -VFDSLVRACTQNGDAQGAYEVI-EQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYK 207
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
EM G++ + + T+N +IY +C ++ EAL +F M + G+ P+ VS+ +
Sbjct: 208 EMDSLGYVEN--------VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
I G CK + L++ K +S N + + TY+S+IN + G L
Sbjct: 260 IDGACKTGD----MRFALQLLGKMGMMSGNFVSPNAV--------TYNSVINGFCKAGRL 307
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+ A ++ M G + T L++ + + EA
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 18/272 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A+E + G+ P +TY+ L+ + + AS A KVF EM++R L YNA
Sbjct: 189 VNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ +A +G ++ ++ +EM GL DA S+ I A + + A+++ M
Sbjct: 249 LL--DALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD--VHSAYKVLDRM 304
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
++P+ T+ +I LC ++ +A+ L EM+ +G +PD TY ++M +C E
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA-NPDTWTYNSIMAYHCDHCE 363
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
++A L M LPD TYN ++ +GR A EI+ GM E
Sbjct: 364 VNRATKLLSRMDRTKCLPD--------RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 240 PDTVSYRQVISGLC----KIREPVKAYELKLE 267
P +Y +I GL K+ E + +E+ ++
Sbjct: 416 PTVATYTVMIHGLVRKKGKLEEACRYFEMMID 447
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 28/337 (8%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+EA M G+ P L+HS C + + A + F + G PS TY+ +
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
++ A A ++ EM ER D ++Y ++ AL + G ++M ++M +
Sbjct: 215 VRGWARIRDA-SGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG--YKMFQEMGN 271
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G+ PD+ ++ + I C G + A+ + M R P+ +T+ +++ C +
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM-KRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
A+ L EM+ KG PD TYN+++ +C V A ++ M PD
Sbjct: 331 DAYLLLDEMIQKGANPD--------TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
+Y V+ L +I +A E+ M +++ Y T+ TY+ +I+
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERK--------FYPTVA-------TYTVMIHG 427
Query: 302 YL-AQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGL 337
+ +G LE+A + +M +G + T+ +L N L
Sbjct: 428 LVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRL 464
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI+P + TY +L+ + S A +F EML R D Y L++ C G+
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVV-DLLAYNALLDALCKSGDVDG 261
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ + EM + G PD ++ I+ YC G V A ++ M L P+
Sbjct: 262 GYKMFQEMGNLGLKPD--------AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
++ +I LCK + AY L EM +K + N DT+ TY+S++ +
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA----NPDTW-----------TYNSIMAYH 358
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
++ +A +L M L D T +++L L +I R A
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRA 402
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 124/336 (36%), Gaps = 36/336 (10%)
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
+Y +L++ L + + +D E F ++ + Y S+A +
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
MV G P + + L++ C V A E F G+ P +Y ++
Sbjct: 164 MVE--------FGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLE 309
G +IR+ A ++ EM +R+C + D Y++L++ GD++
Sbjct: 216 RGWARIRDASGARKVFDEM-LERNC--------------VVDLLAYNALLDALCKSGDVD 260
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDT 369
Y++ MG+ G D + ++ ++ A Y + R +P ++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA--YKVLDRMKRYDLVPNVYTFNH 318
Query: 370 LIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKA 429
+I+ NE V A M+ PD YN ++ H EV++A
Sbjct: 319 IIKTLCKNE-----------KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 430 YNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMS 465
+ M +P + ++K L GR++ +
Sbjct: 368 TKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRAT 403
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 17/283 (6%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVA 75
+TP+ T+ IH +C+ +R +A+ +EM GF P + +Y +I+ I+V
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV- 278
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
E+L EM G ++++Y ++ +L +++ +A + M G PDS+ Y LI
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
L GRL EA +FR + G S + TY +++ YC E KA L EM
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMGLSPDTVSYRQVISGLCK 254
+P + TY L+ G V E ++ + M + LS D +Y +I LC+
Sbjct: 397 C-------NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 255 IREPVKAYELKLEM------DKKRSCLSLNEDTYETLMEQLSD 291
AY L EM + R+CL L E+ + M + ++
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAE 492
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E+L EM G P+ TYT ++ S + +A++V M G P YN +I T
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 66 AFAGTGIEVALEILR-EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
A AG +E A + R EMPE G++ + +Y +I EE KA E+ K+M+ +
Sbjct: 340 ARAGR-LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE--DKAIELLKEMESSNL 396
Query: 125 L-PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
PD TY+ L+ + G + E L +EM+ + S DE TY L+ C A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWA 456
Query: 184 FHLHHEMVHKGFLPDFVT 201
+ L EM+ + P T
Sbjct: 457 YCLFEEMISQDITPRHRT 474
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
G EA +F + L G + + L++ C + +A + L
Sbjct: 168 AGEWEEAVGIF-DRLGEFGLEKNTESMNLLLDTLCKEKRVEQA---------RVVLLQLK 217
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
+ +P+ T+N I+G+C RV+EAL + M G P +SY +I C+ E +K
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 261 AYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
YE+ EM+ S N TY T+M L+ AQ + E+A ++ M
Sbjct: 278 VYEMLSEMEANGS--PPNSITYTTIMSSLN-------------AQKEFEEALRVATRMKR 322
Query: 321 DGYLSDNVTLSVLLNGLNKIARTTEAK 347
G D++ + L++ L + R EA+
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAE 349
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 17/283 (6%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVA 75
+TP+ T+ IH +C+ +R +A+ +EM GF P + +Y +I+ I+V
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV- 278
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
E+L EM G ++++Y ++ +L +++ +A + M G PDS+ Y LI
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSL--NAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 136 DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF 195
L GRL EA +FR + G S + TY +++ YC E KA L EM
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 196 LPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMGLSPDTVSYRQVISGLCK 254
+P + TY L+ G V E ++ + M + LS D +Y +I LC+
Sbjct: 397 C-------NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 255 IREPVKAYELKLEM------DKKRSCLSLNEDTYETLMEQLSD 291
AY L EM + R+CL L E+ + M + ++
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAE 492
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E+L EM G P+ TYT ++ S + +A++V M G P YN +I T
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 66 AFAGTGIEVALEILR-EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
A AG +E A + R EMPE G++ + +Y +I EE KA E+ K+M+ +
Sbjct: 340 ARAGR-LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE--DKAIELLKEMESSNL 396
Query: 125 L-PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
PD TY+ L+ + G + E L +EM+ + S DE TY L+ C A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWA 456
Query: 184 FHLHHEMVHKGFLPDFVT 201
+ L EM+ + P T
Sbjct: 457 YCLFEEMISQDITPRHRT 474
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
G EA +F + L G + + L++ C + +A + L
Sbjct: 168 AGEWEEAVGIF-DRLGEFGLEKNTESMNLLLDTLCKEKRVEQA---------RVVLLQLK 217
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
+ +P+ T+N I+G+C RV+EAL + M G P +SY +I C+ E +K
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 261 AYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
YE+ EM+ S N TY T+M L+ AQ + E+A ++ M
Sbjct: 278 VYEMLSEMEANGS--PPNSITYTTIMSSLN-------------AQKEFEEALRVATRMKR 322
Query: 321 DGYLSDNVTLSVLLNGLNKIARTTEAK 347
G D++ + L++ L + R EA+
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAE 349
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 27/346 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A V +M G+ T LI + C+ A++V + M DRG SP++ TY++
Sbjct: 29 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 88
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I +G + A L EM + + + +++ +I A KL K + K M
Sbjct: 89 LITGLCKSGR-LADAERRLHEMDSKKINPNVITFSALIDA--YAKRGKLSKVDSVYKMMI 145
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
I P+ TY LI LC R+ EA + M+ + G +P+ TY L N +
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK-GCTPNVVTYSTLANGFFKSSRV 204
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
L +M + G + + V+ N LI GY G++ AL +F M GL P
Sbjct: 205 DDGIKLLDDMPQR--------GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 256
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ SY V++GL E KA M K R+ L D TY+ +I+
Sbjct: 257 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL---------------DIITYTIMIH 301
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+++AY L Y + D ++++ LN+ TEA
Sbjct: 302 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 122/302 (40%), Gaps = 38/302 (12%)
Query: 159 GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYC 218
G PD T +L+N +CL A ++ +M G D V LI C
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVD--------TILIDTLC 59
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLN 278
V ALE+ + M + G+SP+ V+Y +I+GLCK A EMD K+ +N
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK----IN 115
Query: 279 EDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNV-TLSVLLNGL 337
+ T+S+LI+ Y +G L K + Y M + NV T S L+ GL
Sbjct: 116 PNVI-----------TFSALIDAYAKRGKLSKVDSV-YKMMIQMSIDPNVFTYSSLIYGL 163
Query: 338 NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKA 397
R EA L + C P + Y TL +N FK + V IK
Sbjct: 164 CMHNRVDEAIKMLDLMISKGC--TPNVVTYSTL----ANGFFK-------SSRVDDGIKL 210
Query: 398 HHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHY 457
M + N LI + ++ ++ A ++ M G +P++ S ++ L
Sbjct: 211 LDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Query: 458 DG 459
+G
Sbjct: 271 NG 272
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 198/497 (39%), Gaps = 62/497 (12%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVF-REMIDRGFSPSLDTYN 59
+ E E V+ EM + E + ++ + E +A +F R +D S + T
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST--TLA 483
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKL-GKAFEMKKD 118
AVI A G +E + G D + Y +I A + KL KA + K
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAY---GKAKLHEKALSLFKG 540
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M ++G PD TY L L V + EA + EML G P TY ++ Y G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD-SGCKPGCKTYAAMIASYVRLG 599
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
S A L+ M TG P+ V Y +LI G+ G V+EA++ FR M E G+
Sbjct: 600 LLSDAVDLYEAMEK--------TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 239 SPDTVSYRQVISGLCKIR---------EPVKAYELKLEMDKKRSCLSLNED-----TYET 284
+ + +I K+ + +K E ++ S LSL D E+
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 285 LMEQLSDEDT-----YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+ L ++ T +++++ Y G L++A ++ M G LSD + + ++
Sbjct: 712 IFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 340 IARTTEA-----------KWYLLWTVFFRCF------GMPAYIIYDTLIENCSNNEFKRL 382
+ +E K L W F F G+P+ + + NE K L
Sbjct: 772 DGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQL---QTAYNEAKPL 828
Query: 383 VGPAITFSV-------KVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYME 435
PAIT ++ A+++ + G + YN +I+ +S S ++ A YM
Sbjct: 829 ATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMR 888
Query: 436 MVHYGFVPHMFSVLALI 452
M G P + + L+
Sbjct: 889 MQEKGLEPDIVTQAYLV 905
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 40/371 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A + EM G+ T+ +IH+ S+A + ++M ++G SP TYN
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSY---CHVICALLLPPEEKLGKAFEMKK 117
++ +A AG IE ALE R++ + GL D V++ H++C + E + A
Sbjct: 381 LLSLHADAGD-IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA----- 434
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+MD I D + V++ G + +A LF S T +++ Y +
Sbjct: 435 EMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS--STTLAAVIDVYAEK 492
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
G + +A E V G ++G ++ YN +I Y ++AL +F+GM G
Sbjct: 493 GLWVEA-----ETVFYG--KRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 238 LSPDTVSYR---QVISGLCKIREPVKAYELKLEMDKKRSC---------------LSLNE 279
PD +Y Q+++G+ + E + L+ K C LS
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 280 DTYETLMEQLS---DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
D YE ME+ +E Y SLIN + G +E+A Q +M G S+++ L+ L+
Sbjct: 606 DLYEA-MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKA 664
Query: 337 LNKIARTTEAK 347
+K+ EA+
Sbjct: 665 YSKVGCLEEAR 675
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 195/495 (39%), Gaps = 67/495 (13%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT----- 64
EM H G+ P TY L+ + + +A+ + M R P T V++
Sbjct: 170 EMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSG 229
Query: 65 ---------NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLP--PEEKLGKAF 113
+ +++ L+ + + P+ G V+ + L + K+
Sbjct: 230 EFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSL 289
Query: 114 EMKKDMDDKGILPD-SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
D P + T+ LID GRL++A +LF EML G P + FN M
Sbjct: 290 HFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSG--VPIDTVTFNTMI 347
Query: 173 CYC-LQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFR 231
C G S+A L +M KG PD TYN L+ + G ++ ALE +R
Sbjct: 348 HTCGTHGHLSEAESLLKKMEEKGISPD--------TKTYNILLSLHADAGDIEAALEYYR 399
Query: 232 GMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD 291
+ ++GL PDTV++R V+ LC+ + + + EMD R+ + ++E + +M+ +
Sbjct: 400 KIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD--RNSIRIDEHSVPVIMQMYVN 457
Query: 292 ED---------------------TYSSLINDYLAQGDLEKAYQLDYVMGH-DGYLSDNVT 329
E T +++I+ Y +G +A + Y + G +D +
Sbjct: 458 EGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE 517
Query: 330 LSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCS-NNEFKRLVGPAIT 388
+V++ K AK + F+ GM T + C+ N+ F+ L G +
Sbjct: 518 YNVMIKAYGK------AKLHEKALSLFK--GMKN---QGTWPDECTYNSLFQMLAGVDL- 565
Query: 389 FSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSV 448
V A + ML KP Y +I + R + A ++Y M G P+
Sbjct: 566 --VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623
Query: 449 LALIKALHYDGRYNE 463
+LI G E
Sbjct: 624 GSLINGFAESGMVEE 638
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 151/343 (44%), Gaps = 33/343 (9%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
L+ + + + +VFRE++D GFS S+ T N ++ +E ++ M
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLL-KLDLMEDCWQVYSVMCRV 230
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
G+ + +Y I + + + + + M+++G PD VTY L+ + C GRL
Sbjct: 231 GIHPN--TYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
EAF L++ +++R PD TY +L+ C G +A H MV +G PD
Sbjct: 289 EAFYLYK-IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD------- 340
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
++YN LIY YC G +Q++ ++ M + PD + + ++ G + + A
Sbjct: 341 -CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 266 LEMDKKRS--------------CLSLNEDTYETLMEQLSDE-------DTYSSLINDYLA 304
+E+ + + C + L++++ +E +TY++LI
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
+E+A L + + + D T L+ L +I R EA+
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 152/358 (42%), Gaps = 32/358 (8%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E ++ LE+M +G P TY L+ S+C+ R +A +++ M R P L TY ++I
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G + A + M +RG+ D +SY +I A E + ++ ++ +M
Sbjct: 314 KGLCKDGR-VREAHQTFHRMVDRGIKPDCMSYNTLIYAYC--KEGMMQQSKKLLHEMLGN 370
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
++PD T +V+++ GRL A + E+ P E F L+ C +G+
Sbjct: 371 SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDF-LIVSLCQEGKPFA 429
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A HL ++ + G TYN LI ++EAL + + D
Sbjct: 430 AKHLLDRIIEE-------EGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDA 482
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRS--------------CLSLNEDTYETLME- 287
+YR +I LC+I +A L EM C L+ D E L+
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSL 542
Query: 288 -----QLSDEDTYSSLINDYLAQG-DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
++ D ++Y+SL+ G +KA +L M G++ + +T L+ L +
Sbjct: 543 FAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVLEQ 600
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 63/257 (24%)
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRG---------------------------- 158
D V +++L+ +G + E F +FRE+L G
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 159 ------GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
G P+ +T+ L N +C F + +M +GF PD LVTYN
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPD--------LVTYNT 276
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK---IREPVKAYELKLEMD 269
L+ YC GR++EA +++ M + PD V+Y +I GLCK +RE + + ++
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 270 KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
K C+S Y++LI Y +G ++++ +L + M + + D T
Sbjct: 337 IKPDCMS------------------YNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT 378
Query: 330 LSVLLNGLNKIARTTEA 346
V++ G + R A
Sbjct: 379 CKVIVEGFVREGRLLSA 395
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 28/253 (11%)
Query: 208 VTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLE 267
V ++ L+ GY LG V+E +FR + + G S V+ +++GL K+ +++
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 268 MDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDN 327
M + + ++ +TY T++ L N + + + M +G+ D
Sbjct: 227 MCR----VGIHPNTY-----------TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDL 271
Query: 328 VTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAI 387
VT + L++ + R EA + L+ + +R +P + Y +LI+ G
Sbjct: 272 VTYNTLVSSYCRRGRLKEA--FYLYKIMYRRRVVPDLVTYTSLIK-----------GLCK 318
Query: 388 TFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFS 447
V+ A + H M+ KPD YN LI+ + + + ++ + EM+ VP F+
Sbjct: 319 DGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT 378
Query: 448 VLALIKALHYDGR 460
+++ +GR
Sbjct: 379 CKVIVEGFVREGR 391
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 12/269 (4%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E+ ++L EM G+ P + T C+ + A+ + ++M GF P + ++
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ G ++ A + L ++ G V+ I L+ E + + E+ +D+
Sbjct: 552 KKLCENGRAVD-ACKYLDDVAGEGFLGHMVASTAAIDGLI--KNEGVDRGLELFRDICAN 608
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD + Y VLI LC R EA LF EM+ + G P TY ++++ +C +GE +
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK-GLKPTVATYNSMIDGWCKEGEIDR 667
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
M PD ++TY +LI+G C+ GR EA+ + M P+
Sbjct: 668 GLSCIVRMYEDEKNPD--------VITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKK 271
+++ +I GLCK +A EM++K
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREMEEK 748
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 194/495 (39%), Gaps = 73/495 (14%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A E++E + + + + +TY LIH F +ESR KA ++F +M G + + Y+ +I
Sbjct: 266 KAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLI 325
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE-MKKDMDD 121
+E+AL + E+ G+ D ++C+ E +L + E + D+D
Sbjct: 326 -GGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCS--FSEESELSRITEVIIGDIDK 382
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREML-----------------HRGGFSPDE 164
K ++ + Y+ L + + EA+ + ++ H PD
Sbjct: 383 KSVM---LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 165 HTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQ 224
+ ++NC + A L H++V G +P P + YN +I G C GR +
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIP------GPMM--YNNIIEGMCKEGRSE 491
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD--------------- 269
E+L++ M + G+ P + + L + + V A +L +M
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 270 KK--------RSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
KK +C L++ E + + ++ I+ + +++ +L + +
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMV---ASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFK 380
G+ D + VL+ L K RT EA +L+ P Y+++I+ C E
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEAD--ILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 381 RLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
R + M PD Y LI S +A + EM
Sbjct: 667 R------------GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 441 FVPHMFSVLALIKAL 455
P+ + +ALI+ L
Sbjct: 715 CYPNRITFMALIQGL 729
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 184/477 (38%), Gaps = 75/477 (15%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR------------GFSPSLDT 57
E+ G+ P L+ SF +ES S+ +V ID+ GF +
Sbjct: 343 EIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLV 402
Query: 58 YNA--VIQT--NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAF 113
+ A IQ + G+ +++L++ + + D+ S VI L+ K+ A
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDH-NKAILPDSDSLSIVINCLV--KANKVDMAV 459
Query: 114 EMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNC 173
+ D+ G++P + Y +I+ +C GR E+ L EM G P + T + C
Sbjct: 460 TLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM-KDAGVEPSQFTLNCIYGC 518
Query: 174 YCLQGEFSKAFHLHHEMVHKGFLP-------------------------DFVTG--FSPS 206
+ +F A L +M GF P D V G F
Sbjct: 519 LAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGH 578
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
+V A I G V LE+FR + G PD ++Y +I LCK ++A L
Sbjct: 579 MVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL-- 636
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
NE + L ++ TY+S+I+ + +G++++ M D D
Sbjct: 637 ----------FNEMVSKGLKPTVA---TYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPD 683
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPA 386
+T + L++GL R +EA + C+ P I + LI+ + G A
Sbjct: 684 VITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY--PNRITFMALIQGLCKCGWS---GEA 738
Query: 387 ITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
+ + M +PD VY L+ S ++ + ++ EMVH G P
Sbjct: 739 LVY--------FREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 152/382 (39%), Gaps = 63/382 (16%)
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
K+M D G D T ++ C G+ A +F E+L RG DEH L+ +C
Sbjct: 203 KEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL--DEHISTILVVSFCK 260
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
G+ KAF L + + ++ T Y LI+G+ R+ +A ++F M M
Sbjct: 261 WGQVDKAFELIEMLEERDIRLNYKT--------YCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT-- 294
G++ D Y +I GLCK ++ A L LE+ KRS + + L+ S+E
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEI--KRSGIPPDRGILGKLLCSFSEESELS 370
Query: 295 ------------------YSSLINDYLAQGDLEKAYQ-LDYVMGH---DGY--------- 323
Y SL ++ + +AY + +MG+ DG
Sbjct: 371 RITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD 430
Query: 324 -----LSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE 378
L D+ +LS+++N L K A + LL + +P ++Y+ +IE
Sbjct: 431 HNKAILPDSDSLSIVINCLVK-ANKVDMAVTLLHDIVQNGL-IPGPMMYNNIIE------ 482
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
G + ++K M +P N + + + A ++ +M
Sbjct: 483 -----GMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 439 YGFVPHMFSVLALIKALHYDGR 460
YGF P + L+K L +GR
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGR 559
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 145/356 (40%), Gaps = 33/356 (9%)
Query: 3 EAEEVLEEMYHKGL-TPHERTYTCLIHSFCQESRASKAV--KVFREMIDRGFSPSLDTYN 59
EA V + + GL P+ TY CL+ + + + +S + +EM D GF T
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLT 218
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+Q G E AL + E+ RG + +S I + ++ KAFE+ + +
Sbjct: 219 PVLQVYCNTGKS-ERALSVFNEILSRGWLDEHIS---TILVVSFCKWGQVDKAFELIEML 274
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+++ I + TY VLI R+ +AF LF +M R G + D Y L+ C +
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKM-RRMGMNADIALYDVLIGGLCKHKD 333
Query: 180 FSKAFHLHHEMVHKGFLPD------FVTGFS--PSLVTYNALIYGYCSLGRVQEALE-IF 230
A L+ E+ G PD + FS L +I G V + +F
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLF 393
Query: 231 RGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS 290
G L + S+ Q + G E D + L +D + + L
Sbjct: 394 EGFIRNDLVHEAYSFIQNLMG-------------NYESDGVSEIVKLLKDHNKAI---LP 437
Query: 291 DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
D D+ S +IN + ++ A L + + +G + + + ++ G+ K R+ E+
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 39/195 (20%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA+ + EM KGL P TY +I +C+E + + M + +P + TY ++I
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
H +CA P E A +M K
Sbjct: 692 ---------------------------------HGLCASGRPSE-----AIFRWNEMKGK 713
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
P+ +T+ LI LC G EA FREM + PD Y +L++ + +
Sbjct: 714 DCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK-EMEPDSAVYLSLVSSFLSSENINA 772
Query: 183 AFHLHHEMVHKGFLP 197
F + EMVHKG P
Sbjct: 773 GFGIFREMVHKGRFP 787
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/517 (20%), Positives = 206/517 (39%), Gaps = 52/517 (10%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A+++ E M +G P E+ + LI R + V+ +M GF P + YN ++
Sbjct: 177 ADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIM- 235
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+A G ++AL + + E GL ++ ++ ++ L ++ + E+ + M +
Sbjct: 236 -DALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC--KAGRIEEMLEILQRMREN 292
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
PD Y +I L G L + ++ EM R PD Y L+ C G +
Sbjct: 293 LCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM-RRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ L EM K L D Y LI G+ + G+V+ A ++ + + G D
Sbjct: 352 GYELFMEMKGKQILID--------REIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADI 403
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLIN 300
Y VI GLC + + KAY+L ++ +E+ + D T S ++
Sbjct: 404 GIYNAVIKGLCSVNQVDKAYKL-----------------FQVAIEEELEPDFETLSPIMV 446
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFF--RC 358
Y+ L + +G GY +S L K+ E K + VF+ +
Sbjct: 447 AYVVMNRLSDFSNVLERIGELGY-----PVSDYLTQFFKLLCADEEKNAMALDVFYILKT 501
Query: 359 FGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIF 418
G + +Y+ L+E ++ ++ + M ++PD + Y++ I
Sbjct: 502 KGHGSVSVYNILMEALYK-----------MGDIQKSLSLFYEMRKLGFEPDSSSYSIAIC 550
Query: 419 DHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNLS 478
+V A + + +++ VP + + L+L K L G + + ++ L +
Sbjct: 551 CFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG 610
Query: 479 DSELLKVLNEIDFSK-PEMTALLDVLSEIAMDGLLLD 514
E L K ++ V+ E+ +G+ ++
Sbjct: 611 PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFIN 647
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 30/275 (10%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E E+L+ M P YT +I + E +++V+ EM P + Y
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ G +E E+ EM + + D Y +I + + K+ A + +D+
Sbjct: 339 LVVGLCKDGR-VERGYELFMEMKGKQILIDREIYRVLIEGFV--ADGKVRSACNLWEDLV 395
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
D G + D Y +I LC V ++ +A+ LF+ + PD T +M Y +
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE-ELEPDFETLSPIMVAYVVMNRL 454
Query: 181 SKAFHLHHEMVHKGF-LPDFVTGF-------------------------SPSLVTYNALI 214
S ++ + G+ + D++T F S+ YN L+
Sbjct: 455 SDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILM 514
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
+G +Q++L +F M ++G PD+ SY I
Sbjct: 515 EALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI 549
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 20/289 (6%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
E++ G Y +I C ++ KA K+F+ I+ P +T + ++
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVM 451
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
+ + +L + E G Y LL EEK A ++ + KG S
Sbjct: 452 NRLSDFS-NVLERIGELGYPVS--DYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS 508
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
V Y +L++ L +G + ++ LF EM + GF PD +Y + C+ +G+ A H
Sbjct: 509 V-YNILMEALYKMGDIQKSLSLFYEM-RKLGFEPDSSSYSIAICCFVEKGDVKAACSFHE 566
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFR---GMPEMGLSPDTVSY 245
+++ + PS+ Y +L G C +G + + + R G E G P Y
Sbjct: 567 KIIEMSCV--------PSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKY 616
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
+ +CK K ++ EM+++ + +NE Y ++ +S T
Sbjct: 617 ALTVCHVCKGSNAEKVMKVVDEMNQE--GVFINEVIYCAIISGMSKHGT 663
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 123/328 (37%), Gaps = 46/328 (14%)
Query: 147 AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
A D E++ G P E + L+ + + ++++ +M K F GF P
Sbjct: 176 AADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKM--KKF------GFKPR 227
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
+ YN ++ G AL ++ E GL ++ ++ ++ GLCK + E+
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI-- 285
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
+ + E L D Y+++I +++G+L+ + ++ M D
Sbjct: 286 ---------------LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYI---IYDTLIENCSNNEFKR 381
D + L+ GL K R + +F G I IY LIE
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERG-----YELFMEMKGKQILIDREIYRVLIE--------- 376
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
G V+ A ++ Y D +YN +I +V KAY ++ +
Sbjct: 377 --GFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Query: 442 VPHMFSVLALIKALHYDGRYNEMSWVIH 469
P ++ ++ A R ++ S V+
Sbjct: 435 EPDFETLSPIMVAYVVMNRLSDFSNVLE 462
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 15/238 (6%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+ +E ++M +G+T +Y+ + C+ + KAVK+++EM R + YN VI
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ A G+E + + REM ERG + ++ +I LL + ++ A+ M +M +
Sbjct: 267 RAIG-ASQGVEFGIRVFREMRERGCEPNVATHNTII--KLLCEDGRMRDAYRMLDEMPKR 323
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PDS+TY L L + SE LF M+ R G P TY LM + G
Sbjct: 324 GCQPDSITYMCLFSRL---EKPSEILSLFGRMI-RSGVRPKMDTYVMLMRKFERWGFLQP 379
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
++ M G PD YNA+I G + A E M E GLSP
Sbjct: 380 VLYVWKTMKESGDTPD--------SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 110 GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFN 169
GK E K MD +G+ D +Y + +D +C G+ +A L++EM R D Y
Sbjct: 206 GKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR-MKLDVVAYNT 264
Query: 170 LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
++ + EM +G P++ T+N +I C GR+++A +
Sbjct: 265 VIRAIGASQGVEFGIRVFREMRERGC--------EPNVATHNTIIKLLCEDGRMRDAYRM 316
Query: 230 FRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
MP+ G PD+++Y + S L K E + + + RS + DTY LM +
Sbjct: 317 LDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMI-----RSGVRPKMDTYVMLMRKF 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A +L+EM +G P TY CL F + + S+ + +F MI G P +DTY
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTY-- 364
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ F G ++ L + + M E G T D+ +Y VI AL+ + L A E +++M
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI--QKGMLDMAREYEEEM 422
Query: 120 DDKGILP 126
++G+ P
Sbjct: 423 IERGLSP 429
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A++V ++M K P ++YT L+ + QE + +V REM D GF P + Y +I
Sbjct: 215 DAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIII 274
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL--LPPEEKLGKAFEMKKDMD 120
+ A E A+ EM +R H+ C+L+ L E+KL A E +
Sbjct: 275 NAHCKA-KKYEEAIRFFNEMEQRNCKPSP----HIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G ++ TY L+ CW R+ +A+ EM + G P+ TY +++
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK-GVGPNARTYDIILHHLIRMQRS 388
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A+ ++ M P++ TY ++ +C+ R+ A++I+ M G+ P
Sbjct: 389 KEAYEVYQTM-----------SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP 437
Query: 241 DTVSYRQVISGLC 253
+ +I+ LC
Sbjct: 438 GMHMFSSLITALC 450
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
+EV EM +G P Y +I++ C+ + +A++ F EM R PS + ++I
Sbjct: 252 DEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLIN- 310
Query: 65 NAFAGTGIEV----ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
G G E ALE G +A +Y ++ A +++ A++ +M
Sbjct: 311 ----GLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS--QRMEDAYKTVDEMR 364
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG+ P++ TY++++ +L + R EA+++++ M P TY ++ +C +
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM----SCEPTVSTYEIMVRMFCNKERL 420
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A + EM KG L P + +++LI C ++ EA E F M ++G+ P
Sbjct: 421 DMAIKIWDEMKGKGVL--------PGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
+ ++ L K +L ++MD+ R
Sbjct: 473 PGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLR 504
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 7/186 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A E E G TY L+ ++C R A K EM +G P+ TY+
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ E A E+ + M + + + I + +E+L A ++ +M
Sbjct: 378 ILHHLIRMQRSKE-AYEVYQTM-----SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMK 431
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG+LP + LI LC +L EA + F EML G P H + L +G
Sbjct: 432 GKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLD-VGIRPPGHMFSRLKQTLLDEGRK 490
Query: 181 SKAFHL 186
K L
Sbjct: 491 DKVTDL 496
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 150/387 (38%), Gaps = 56/387 (14%)
Query: 107 EKLGKAFEMK------KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGF 160
E LGK + K DM K +L T+ ++ ++ EA F +M GF
Sbjct: 136 ESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKM-EEFGF 193
Query: 161 SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSL 220
+ + +++ A + +M K F PD + +Y L+ G+
Sbjct: 194 KMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPD--------IKSYTILLEGWGQE 245
Query: 221 GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS------- 273
+ E+ R M + G PD V+Y +I+ CK ++ +A EM+++
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 274 CLSLN--------EDTYETLMEQLS-----DEDTYSSLINDYLAQGDLEKAYQLDYVMGH 320
C +N D E S + TY++L+ Y +E AY+ M
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 321 DGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFK 380
G + T ++L+ L ++ R+ EA + V+ P Y+ ++ N E
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEA-----YEVYQTMSCEPTVSTYEIMVRMFCNKE-- 418
Query: 381 RLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYG 440
+ +AIK M P +++ LI ++ +A + EM+ G
Sbjct: 419 ---------RLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 441 FVP--HMFSVLALIKALHYDGRYNEMS 465
P HMFS L + L +GR ++++
Sbjct: 470 IRPPGHMFSRLK--QTLLDEGRKDKVT 494
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 158/374 (42%), Gaps = 49/374 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E E+ E+M KG+ + + L+ SFC E +A+ + EM +G + YN ++
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+A+ + IE + EM ++GL A +Y ++ A + + + + ++M+D
Sbjct: 387 --DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET--LLREMED 442
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSE-AFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ P+ +Y LI ++S+ A D F M + G P H+Y L++ Y + G
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM-KKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 181 SKAFHLHHEMVHKGFLPDFVT---------------------------GFSPSLVTYNAL 213
KA+ EM +G P T + +TYN L
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
+ G+ G EA ++ +MGL P ++Y +++ + + K +L EM +
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM----A 617
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
L+L D+ TYS++I ++ D ++A+ +M G + D + L
Sbjct: 618 ALNLKPDSI-----------TYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Query: 334 LNGLNKIARTTEAK 347
L A+T K
Sbjct: 667 RAILEDKAKTKNRK 680
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 165/415 (39%), Gaps = 61/415 (14%)
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
L +L +P++ D Y I L ++ A+E+ + MD + PD+VT +LI
Sbjct: 258 LLLLSNLPDKEEFRDVRLYNAAISGL--SASQRYDDAWEVYEAMDKINVYPDNVTCAILI 315
Query: 136 DNLCWVGRLS-EAFDLFREMLHRG-GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
L GR + E +++F +M +G +S D + L+ +C +G +A + EM K
Sbjct: 316 TTLRKAGRSAKEVWEIFEKMSEKGVKWSQD--VFGGLVKSFCDEGLKEEALVIQTEMEKK 373
Query: 194 GFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC 253
G + + YN L+ Y ++E +F M + GL P +Y ++
Sbjct: 374 GIRSN--------TIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 254 KIREPVKAYELKLEMD--------KKRSCLSLNEDTYETLMEQLSD-------------E 292
+ +P L EM+ K +CL + + + +D
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 293 DTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
+Y++LI+ Y G EKAY M +G T + +L+ + T K +W
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT--GKLMEIW 543
Query: 353 TVFFRCFGMPAYIIYDTLIENCSNN----EFKRLVGPAITFSVKVAIKAHHTMLHG---- 404
+ R I Y+TL++ + E + +V ++ ++ ++ +++
Sbjct: 544 KLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 405 ----------------NYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
N KPD Y+ +I+ R + +A+ + MV G VP
Sbjct: 604 GQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Query: 3 EAEEVLEEMYHKG---LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
EAEEV E + + L P ++ Y +I+ + + KA KVF M+ +G S TYN
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+++ +F + EV+ +I +M + D VSY +I A E+ +A + ++M
Sbjct: 287 SLM---SFETSYKEVS-KIYDQMQRSDIQPDVVSYALLIKAYGRARREE--EALSVFEEM 340
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D G+ P Y +L+D G + +A +F+ M R PD +Y +++ Y +
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASD 399
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
E K F V GF P++VTY LI GY V++ +E++ M G+
Sbjct: 400 M--------EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 240 PDTVSYRQVI--SGLCK 254
+ ++ SG CK
Sbjct: 452 ANQTILTTIMDASGRCK 468
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E ++ ++M + P +Y LI ++ + R +A+ VF EM+D G P+ YN ++
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+AFA +G +E A + + M + D SY ++ A + + + + F + +D
Sbjct: 357 --DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD- 413
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G P+ VTY LI + + +++ E + G ++ +M+ F
Sbjct: 414 -GFEPNIVTYGTLIKGYAKANDVEKMMEVY-EKMRLSGIKANQTILTTIMDASGRCKNFG 471
Query: 182 KAFHLHHEMVHKGFLPD 198
A + EM G PD
Sbjct: 472 SALGWYKEMESCGVPPD 488
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Query: 3 EAEEVLEEMYHKG---LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
EAEEV E + + L P ++ Y +I+ + + KA KVF M+ +G S TYN
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+++ +F + EV+ +I +M + D VSY +I A E+ +A + ++M
Sbjct: 294 SLM---SFETSYKEVS-KIYDQMQRSDIQPDVVSYALLIKAYGRARREE--EALSVFEEM 347
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D G+ P Y +L+D G + +A +F+ M R PD +Y +++ Y +
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASD 406
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A K F V GF P++VTY LI GY V++ +E++ M G+
Sbjct: 407 MEGA--------EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 240 PDTVSYRQVI--SGLCK 254
+ ++ SG CK
Sbjct: 459 ANQTILTTIMDASGRCK 475
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E ++ ++M + P +Y LI ++ + R +A+ VF EM+D G P+ YN ++
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+AFA +G +E A + + M + D SY ++ A + + + + F + +D
Sbjct: 364 --DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD- 420
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G P+ VTY LI + + +++ E + G ++ +M+ F
Sbjct: 421 -GFEPNIVTYGTLIKGYAKANDVEKMMEVY-EKMRLSGIKANQTILTTIMDASGRCKNFG 478
Query: 182 KAFHLHHEMVHKGFLPD 198
A + EM G PD
Sbjct: 479 SALGWYKEMESCGVPPD 495
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E E +L M H+ + P T+ L +C+ KA+K+ EMI+ G P TY A
Sbjct: 250 VKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCA 308
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADA-VSYCHVICALLLPPEEKLGKAFEMKKDM 119
I T AG ++ A ++ M +G A + + + L +K + FE+ M
Sbjct: 309 AIDTFCQAGM-VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRM 367
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
G LPD TY+ +I+ +C ++ EA+ EM ++ G+ PD TY + C +
Sbjct: 368 ISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK-GYPPDIVTYNCFLRVLCENRK 426
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A L+ MV + +PS+ TYN LI + + A + M +
Sbjct: 427 TDEALKLYGRMVE--------SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCV 478
Query: 240 PDTVSYRQVISGL 252
D +Y +I+GL
Sbjct: 479 QDVETYCAMINGL 491
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 119/303 (39%), Gaps = 51/303 (16%)
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
++V LEILR+ ER LT HV + F +K + K P+ +
Sbjct: 199 VDVLLEILRKYCERYLT-------HV-------------QKFAKRKRIRVK-TQPEINAF 237
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
+L+D LC G + E L R M HR PD +T+ L +C + KA L EM+
Sbjct: 238 NMLLDALCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS---PDTVSYRQV 248
G P TY A I +C G V EA ++F M G + P ++ +
Sbjct: 296 E--------AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
I L K DK C L T L D TY +I +
Sbjct: 348 IVALAK-------------NDKAEECFELIGRMISTGC--LPDVSTYKDVIEGMCMAEKV 392
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYD 368
++AY+ M + GY D VT + L L + +T EA V RC P+ Y+
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC--APSVQTYN 450
Query: 369 TLI 371
LI
Sbjct: 451 MLI 453
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + L+EM +KG P TY C + C+ + +A+K++ M++ +PS+ TYN +I
Sbjct: 394 EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL 102
+ F + A EM +R D +YC +I L
Sbjct: 454 -SMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 492
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E E++ M G P TY +I C + +A K EM ++G+ P + TYN +
Sbjct: 359 ECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFL 418
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ + AL++ M E +Y +++ ++ ++ G AF +MD +
Sbjct: 419 RV-LCENRKTDEALKLYGRMVESRCAPSVQTY-NMLISMFFEMDDPDG-AFNTWTEMDKR 475
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRG 158
+ D TY +I+ L R EA L E++++G
Sbjct: 476 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 23/291 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E++EE+ L P TYT LI F + K + +M++ G SP++ Y A+I
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
F G + + + M E + D ++Y ++ L K K ++ +
Sbjct: 695 --GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARK--KKRQVIVEPGK 750
Query: 122 KGILPDSVTYEVLI---DNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+ +L + + L+ +L G S A ++ ++ + P+ + + ++ YC G
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV--KKSIIPNLYLHNTIITGYCAAG 808
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+A++ H E + K G P+LVTY L+ + G ++ A+++F G
Sbjct: 809 RLDEAYN-HLESMQK-------EGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNC 857
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
PD V Y ++ GLC + P+ A L LEM K S ++ N+D+YE L++ L
Sbjct: 858 EPDQVMYSTLLKGLCDFKRPLDALALMLEMQK--SGINPNKDSYEKLLQCL 906
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 156/401 (38%), Gaps = 72/401 (17%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
+E+M + G TP +Y +I QE+ + + + F P +DTY V+
Sbjct: 500 IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN-ELC 558
Query: 68 AGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
+ A I+ M E GL Y +I +L + ++ +A E M + GI PD
Sbjct: 559 KKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSL--GKQGRVVEAEETFAKMLESGIQPD 616
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
+ Y ++I+ GR+ EA +L E++ + P TY L++ + G K
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVV-KHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
+M+ G SP++V Y ALI + G + + +F M E + D ++Y
Sbjct: 676 DKMLEDGL--------SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYIT 727
Query: 248 VISGLCK----------IREP--------------------------VKAYELKLEMDKK 271
++SGL + I EP K++ +++ K
Sbjct: 728 LLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK 787
Query: 272 RS---------------CLSLNEDTYETLMEQLSDED------TYSSLINDYLAQGDLEK 310
+S C + D +E + E TY+ L+ ++ GD+E
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 311 AYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLL 351
A +D G + D V S LL GL R +A +L
Sbjct: 848 A--IDLFEGTNCE-PDQVMYSTLLKGLCDFKRPLDALALML 885
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 192/488 (39%), Gaps = 77/488 (15%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFS---PSLDT 57
M +A ++L M G+ P TY L+ + A+ + + ++D G P +D
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 58 YNAVIQTNAFAGTGIEVALE-ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
IEV +E +L E+ + AV V AL + A
Sbjct: 454 LG-----------NIEVKVESLLGEIARKDANLAAVGLAVVTTALC--SQRNYIAALSRI 500
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
+ M + G P +Y +I L + + E ++ F PD TY ++N C
Sbjct: 501 EKMVNLGCTPLPFSYNSVIKCL-FQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCK 559
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+ + AF + M G P++ Y+++I GRV EA E F M E
Sbjct: 560 KNDRDAAFAIIDAMEE--------LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES 611
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDK---KRSC------------LSLNEDT 281
G+ PD ++Y +I+ + +A EL E+ K + S + + E
Sbjct: 612 GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671
Query: 282 YETLMEQLSDEDT-----YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
+ L + L D + Y++LI +L +GD + ++ L +MG + D++ LL+G
Sbjct: 672 CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSG 731
Query: 337 L-NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAI 395
L +AR + + ++E +RL+ S+ ++
Sbjct: 732 LWRAMARKKKRQ---------------------VIVEPGKEKLLQRLIRTKPLVSIPSSL 770
Query: 396 -----KAHHTMLHGNYK----PDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMF 446
K+ + G K P+ ++N +I + + + +AYN M G VP++
Sbjct: 771 GNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLV 830
Query: 447 SVLALIKA 454
+ L+K+
Sbjct: 831 TYTILMKS 838
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 180/474 (37%), Gaps = 87/474 (18%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EAE + + M G + YTCL+ +C+++ + A++++ M++R F +N +
Sbjct: 254 AEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTL 313
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I + F G+ L K M M
Sbjct: 314 I--HGFMKLGM------------------------------------LDKGRVMFSQMIK 335
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
KG+ + TY ++I + C G + A LF S + H Y NL+ + +G
Sbjct: 336 KGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMD 395
Query: 182 KAFHLHHEMVHKGFLPDFVTGF------------SPSLVTYNALIYGYCS--------LG 221
KA L M+ G +PD +T F ++V +++ C LG
Sbjct: 396 KAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLG 455
Query: 222 RVQEALEIFRG-MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
++ +E G + + V V + LC R + A ++E C L
Sbjct: 456 NIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALS-RIEKMVNLGCTPL-PF 513
Query: 281 TYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKI 340
+Y ++++ L E+ +I D + ++ + +LD+V D YL +++N L K
Sbjct: 514 SYNSVIKCLFQEN----IIEDLASLVNIIQ--ELDFVPDVDTYL-------IVVNELCK- 559
Query: 341 ARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHT 400
+ + + P IY ++I + R+V TF+
Sbjct: 560 -KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQ--GRVVEAEETFA---------K 607
Query: 401 MLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
ML +PD Y ++I ++R+ + +A + E+V + P F+ LI
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 198/509 (38%), Gaps = 105/509 (20%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA L+ + G P + + ++ C + R +A F ++ +RG
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERG------------ 196
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+G + + + + G +A+ +C + P
Sbjct: 197 -----SGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMP----------------- 234
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
LP ++ Y+ L C G +EA LF M G+ D+ Y LM YC +
Sbjct: 235 --LPVNL-YKSLFYCFCKRGCAAEAEALFDHM-EVDGYYVDKVMYTCLMKEYCKDNNMTM 290
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L+ MV + F D P + +N LI+G+ LG + + +F M + G+ +
Sbjct: 291 AMRLYLRMVERSFELD------PCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNV 342
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+Y +I CK E Y L+L ++ S ED + Y++LI +
Sbjct: 343 FTYHIMIGSYCK--EGNVDYALRLFVNNTGS-----EDISRNV-------HCYTNLIFGF 388
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
+G ++KA L M +G + D++T VLL L K E K+
Sbjct: 389 YKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK---CHELKY-------------- 431
Query: 363 AYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS 421
A +I ++++N C N P I + +K ++L + D + + + +
Sbjct: 432 AMVILQSILDNGCGINP------PVIDDLGNIEVKV-ESLLGEIARKDANLAAVGLAVVT 484
Query: 422 RSLEVHKAYNMYM----EMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRSCNL 477
+L + Y + +MV+ G P FS ++IK L + ++
Sbjct: 485 TALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDL------------- 531
Query: 478 SDSELLKVLNEIDFSKPEMTALLDVLSEI 506
+ L+ ++ E+DF P++ L V++E+
Sbjct: 532 --ASLVNIIQELDFV-PDVDTYLIVVNEL 557
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 13/251 (5%)
Query: 15 GLTPHER-TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIE 73
GL H+R T+ +I + S+ + A + +M ++G D + +I++ AG ++
Sbjct: 144 GLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGI-VQ 202
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
+++I ++M + G+ SY + +L + K + K M +G+ P TY +
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK--MVSEGVEPTRHTYNL 260
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
++ RL A F +M RG SPD+ T+ ++N +C + +A L EM K
Sbjct: 261 MLWGFFLSLRLETALRFFEDMKTRG-ISPDDATFNTMINGFCRFKKMDEAEKLFVEM--K 317
Query: 194 GFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC 253
G PS+V+Y +I GY ++ RV + L IF M G+ P+ +Y ++ GLC
Sbjct: 318 G------NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLC 371
Query: 254 KIREPVKAYEL 264
+ V+A +
Sbjct: 372 DAGKMVEAKNI 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 182/467 (38%), Gaps = 42/467 (8%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+L +M KG+ E + LI S+ + ++VK+F++M D G ++ +YN++ +
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
G + +A +M G+ +Y ++ L +L A +DM +GI P
Sbjct: 232 RRGRYM-MAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL--RLETALRFFEDMKTRGISP 288
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
D T+ +I+ C ++ EA LF EM P +Y ++ Y +
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEM-KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP-DTVSY 245
EM +G P+ TY+ L+ G C G++ EA I + M ++P D +
Sbjct: 348 FEEMRS--------SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDT--YETLMEQLSDEDTYSSLIN--D 301
+++ K + A E+ M + L++ + Y L+E Y+ I D
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAM----ATLNVPAEAGHYGVLIENQCKASAYNRAIKLLD 455
Query: 302 YLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGM 361
L + ++ +Q M Y N + L N +T +A+ V FR
Sbjct: 456 TLIEKEIILRHQDTLEMEPSAY---NPIIEYLCNN----GQTAKAE------VLFRQLMK 502
Query: 362 PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHS 421
D L NN + G A + + + M + Y LLI +
Sbjct: 503 RGVQDQDAL-----NNLIR---GHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYM 554
Query: 422 RSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVI 468
E A MV G VP ++I++L DGR S V+
Sbjct: 555 SKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVM 601
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 152/385 (39%), Gaps = 58/385 (15%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A+ +M +G+ P TY ++ F R A++ F +M RG SP T+N +I
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMI- 297
Query: 64 TNAFAG-TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
N F ++ A ++ EM + VSY +I L +++ + ++M
Sbjct: 298 -NGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL--AVDRVDDGLRIFEEMRSS 354
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYF-------------- 168
GI P++ TY L+ LC G++ EA ++ + M+ + +P +++ F
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK-HIAPKDNSIFLKLLVSQSKAGDMA 413
Query: 169 ----------------------NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPS 206
L+ C +++A L ++ K +
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEME 473
Query: 207 LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKL 266
YN +I C+ G+ +A +FR + + G+ D + +I G K P +YE+ L
Sbjct: 474 PSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI-L 531
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
++ +R + + Y LI Y+++G+ A M DG++ D
Sbjct: 532 KIMSRRGV--------------PRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPD 577
Query: 327 NVTLSVLLNGLNKIARTTEAKWYLL 351
+ ++ L + R A ++
Sbjct: 578 SSLFRSVIESLFEDGRVQTASRVMM 602
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 25/279 (8%)
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
+E AL+ R GL H+ +L KL A + DM +KG+ D +
Sbjct: 130 LEHALQFFRWTERSGLIRHDRD-THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
VLI++ G + E+ +F++M G +Y +L +G + A ++MV
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLG-VERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
+G P+ TYN +++G+ R++ AL F M G+SPD ++ +I+G
Sbjct: 248 SEGV--------EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 252 LCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKA 311
C+ ++ +A +L +EM + S+ +Y+++I YLA ++
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVV---------------SYTTMIKGYLAVDRVDDG 344
Query: 312 YQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
++ M G + T S LL GL + EAK L
Sbjct: 345 LRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 130/328 (39%), Gaps = 39/328 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EAE++ EM + P +YT +I + R +++F EM G P+ TY+
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKK 117
++ AG +E A IL+ M + + S I LL + K G A E+ K
Sbjct: 366 LLPGLCDAGKMVE-AKNILKNMMAKHIAPKDNS----IFLKLLVSQSKAGDMAAATEVLK 420
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREML-------HRGGFSPDEHTYFNL 170
M + ++ Y VLI+N C + A L ++ H+ + Y +
Sbjct: 421 AMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPI 480
Query: 171 MNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIF 230
+ C G+ +KA L +++ +G N LI G+ G + EI
Sbjct: 481 IEYLCNNGQTAKAEVLFRQLMKRGV---------QDQDALNNLIRGHAKEGNPDSSYEIL 531
Query: 231 RGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS 290
+ M G+ ++ +Y +I EP D K + S+ ED + +
Sbjct: 532 KIMSRRGVPRESNAYELLIKSYMSKGEP---------GDAKTALDSMVEDGH------VP 576
Query: 291 DEDTYSSLINDYLAQGDLEKAYQLDYVM 318
D + S+I G ++ A ++ +M
Sbjct: 577 DSSLFRSVIESLFEDGRVQTASRVMMIM 604
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 15/240 (6%)
Query: 46 MIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPP 105
M R S++T+ +I+ AG E A+ M + G D +++ VI L
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASE-AVHCFNRMEDYGCVPDKIAFSIVISNL--SR 233
Query: 106 EEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
+ + +A + D+ PD + Y L+ C G +SEA +F+EM G P+ +
Sbjct: 234 KRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEM-KLAGIEPNVY 291
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
TY +++ C G+ S+A H F +G +P+ +T+N L+ + GR ++
Sbjct: 292 TYSIVIDALCRCGQISRA--------HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
L+++ M ++G PDT++Y +I C+ A ++ M KK+ +N T+ T+
Sbjct: 344 VLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC--EVNASTFNTI 401
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 13/272 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EAE+V +EM G+ P+ TY+ +I + C+ + S+A VF +M+D G +P+ T+N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+++ + AG E L++ +M + G D ++Y +I A +E L A ++ M
Sbjct: 331 LMRVHVKAGR-TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR--DENLENAVKVLNTMI 387
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
K ++ T+ + + ++ A ++ +M+ P+ TY LM +
Sbjct: 388 KKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME-AKCEPNTVTYNILMRMFVGSKST 446
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMGLS 239
+ EM K P++ TY L+ +C +G A ++F+ M E L+
Sbjct: 447 DMVLKMKKEMDDK--------EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
P Y V++ L + + K EL +M +K
Sbjct: 499 PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+EA+ + + + P YT L+ +C+ S+A KVF+EM G P++ TY+ V
Sbjct: 238 SEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I G I A ++ +M + G +A+++ +++ + + K ++ M
Sbjct: 297 IDALCRCGQ-ISRAHDVFADMLDSGCAPNAITFNNLMRVHV--KAGRTEKVLQVYNQMKK 353
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G PD++TY LI+ C L A + M+ + + T+ + + + +
Sbjct: 354 LGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKRDVN 412
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
A ++ +M+ P+ VTYN L+ + L++ + M + + P+
Sbjct: 413 GAHRMYSKMME--------AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
+YR +++ C + AY+L EM +++ CL+ + YE ++ QL
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK-CLTPSLSLYEMVLAQL 511
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+V +M G P TY LI + C++ AVKV MI + + T+N + +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY- 404
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
+ A + +M E + V+Y I + + +MKK+MDDK +
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYN--ILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
P+ TY +L+ C +G + A+ LF+EM+ +P Y ++ G+ K
Sbjct: 463 PNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEE 522
Query: 186 LHHEMVHKGFL 196
L +M+ KG +
Sbjct: 523 LVEKMIQKGLV 533
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
T+ +LI G SEA F M G PD+ + +++ + S+A
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCV-PDKIAFSIVISNLSRKRRASEA------ 240
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
+ F F P ++ Y L+ G+C G + EA ++F+ M G+ P+ +Y VI
Sbjct: 241 ---QSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLE 309
LC+ + +A+++ +M L+ + T+++L+ ++ G E
Sbjct: 298 DALCRCGQISRAHDVFADM--------LDSGCAPNAI-------TFNNLMRVHVKAGRTE 342
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNG 336
K Q+ M G D +T + L+
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEA 369
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 15/256 (5%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
++VL + G +T LI + + K + F +M++ F+P N ++
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDV 163
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
++ A E+ + G+ + SY ++ A L + L A+++ M ++ +
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL--NDDLSIAYQLFGKMLERDV 221
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
+PD +Y++LI C G+++ A +L +ML++G F PD L+ C QG F +
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG-FVPDR----TLIGGLCDQGMFDEGK 276
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
EM+ KGF P F N L+ G+CS G+V+EA ++ + + G + + +
Sbjct: 277 KYLEEMISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 328
Query: 245 YRQVISGLCKIREPVK 260
+ VI +C E K
Sbjct: 329 WEMVIPLICNEDESEK 344
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 109 LGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYF 168
L KAFE+ K G++P++ +Y +L+ C LS A+ LF +ML R PD +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD-VVPDVDSYK 229
Query: 169 NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALE 228
L+ +C +G+ + A L +M++KGF+PD LI G C G E +
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPD------------RTLIGGLCDQGMFDEGKK 277
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLC---KIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
M G SP ++ G C K+ E E+ + ++ +L+ DT+E +
Sbjct: 278 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM-----KNGETLHSDTWEMV 332
Query: 286 MEQLSDED 293
+ + +ED
Sbjct: 333 IPLICNED 340
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 44/323 (13%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++EA +V+ M G++ ++ L+ F + KAV +F +MI G SP+L TY +
Sbjct: 228 VSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTS 287
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK-- 117
+I+ F G ++ A +L ++ GL D V+C L++ +LG+ E +K
Sbjct: 288 LIK--GFVDLGMVDEAFTVLSKVQSEGLAPDI-----VLCNLMIHTYTRLGRFEEARKVF 340
Query: 118 -DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
++ + ++PD T+ ++ +LC LS FDL + H G D T L NC+
Sbjct: 341 TSLEKRKLVPDQYTFASILSSLC----LSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK 396
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVT----------GFSPSLVT----------------- 209
G S A + M +K F D T G +P
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
++A+I LG+ A+ +F+ D VSY I GL + + +AY L +M
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDM- 515
Query: 270 KKRSCLSLNEDTYETLMEQLSDE 292
K + N TY T++ L E
Sbjct: 516 -KEGGIYPNRRTYRTIISGLCKE 537
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 151/342 (44%), Gaps = 31/342 (9%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
+ ++E + G R + L+ F + KA++V+ M GF P+ N ++
Sbjct: 93 DRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDV 152
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
N F + ALEI + R + ++ H C+ + +G +K+ M +G
Sbjct: 153 N-FKLNVVNGALEIFEGIRFRNFFSFDIALSH-FCSRG-GRGDLVGVKIVLKR-MIGEGF 208
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
P+ + ++ C G +SEAF + M+ G S + + L++ + GE KA
Sbjct: 209 YPNRERFGQILRLCCRTGCVSEAFQVVGLMIC-SGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
L ++M+ G SP+LVTY +LI G+ LG V EA + + GL+PD V
Sbjct: 268 DLFNKMIQ--------IGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
+I ++ +A ++ ++K++ + D+ T++S+++
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRK---------------LVPDQYTFASILSSLCL 364
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
G + ++ + +G D D VT ++L N +KI + A
Sbjct: 365 SGKFDLVPRITHGIGTD---FDLVTGNLLSNCFSKIGYNSYA 403
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 153/364 (42%), Gaps = 31/364 (8%)
Query: 20 ERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEIL 79
E Y +I S C+ R A ++ M +G P +YNA+I G G A ++L
Sbjct: 307 EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDG-GCMRAYQLL 365
Query: 80 REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLC 139
E E +Y ++ +L E GKA + + M K + Y + + LC
Sbjct: 366 EEGSEFEFFPSEYTYKLLMESLC--KELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC 423
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
+ +E ++ ML G PDE+T ++N C G A + +M+ F
Sbjct: 424 VMDNPTEILNVLVSMLQ-GDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC--- 479
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIF-RGMPEMGLSPDTVSYRQVISGLCKIREP 258
+P VT N ++ G + GR +EAL++ R MPE + P V+Y VI GL K+ +
Sbjct: 480 ----APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKG 535
Query: 259 VKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL-DYV 317
+A + +++K +D TY+ +I+ ++ A + D V
Sbjct: 536 DEAMSVFGQLEKA---------------SVTADSTTYAIIIDGLCVTNKVDMAKKFWDDV 580
Query: 318 MGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNN 377
+ G D + L GL + ++A +L +P + Y+T+I CS +
Sbjct: 581 IWPSGR-HDAFVYAAFLKGLCQSGYLSDACHFLY--DLADSGAIPNVVCYNTVIAECSRS 637
Query: 378 EFKR 381
KR
Sbjct: 638 GLKR 641
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 14/247 (5%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF-SPSLDTYNA 60
TE VL M P E T +I+ C+ R A+KV +M+ F +P T N
Sbjct: 429 TEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNT 488
Query: 61 VIQTNAFAGTGIEVALEIL-REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
V+ A E AL++L R MPE + V+Y VI L K +A + +
Sbjct: 489 VM-CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLF--KLHKGDEAMSVFGQL 545
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ + DS TY ++ID LC ++ A + +++ G D Y + C G
Sbjct: 546 EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSG-RHDAFVYAAFLKGLCQSGY 604
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
S A H +++ G +P+ +V YN +I G +EA +I M + G +
Sbjct: 605 LSDACHFLYDLADSGAIPN--------VVCYNTVIAECSRSGLKREAYQILEEMRKNGQA 656
Query: 240 PDTVSYR 246
PD V++R
Sbjct: 657 PDAVTWR 663
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 14/252 (5%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ M KGL P +Y +IH C++ +A ++ E + F PS TY +++
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLME 385
Query: 64 T--NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ LE++ T Y +C + P E + M
Sbjct: 386 SLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE-----ILNVLVSMLQ 440
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
PD T +I+ LC +GR+ +A + +M+ +PD T +M QG
Sbjct: 441 GDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAE 500
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A + + + +P+ P +V YNA+I G L + EA+ +F + + ++ D
Sbjct: 501 EALDVLNRV-----MPE--NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 242 TVSYRQVISGLC 253
+ +Y +I GLC
Sbjct: 554 STTYAIIIDGLC 565
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 96 HVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREML 155
H ICA+ P+E A + + +G PDS+ +I +LC GR EA F L
Sbjct: 62 HSICAVRRNPDE----ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFL 117
Query: 156 HRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK--GFLPDFVTGFSPSLVTYNAL 213
GF PDE T N + +S++ ++H+ GF +FV PSL YN L
Sbjct: 118 A-SGFIPDERT----CNVIIARLLYSRSPVSTLGVIHRLIGFKKEFV----PSLTNYNRL 168
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
+ C++ RV +A ++ M G PD V++ +I G C+IRE A+++ D+ R
Sbjct: 169 MNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV---FDEMRV 225
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
C + ++ T S LI +L D+E +L
Sbjct: 226 C-GIRPNSL-----------TLSVLIGGFLKMRDVETGRKL 254
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 160/432 (37%), Gaps = 90/432 (20%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +L+ + +G P + +IHS C R +A + F + GF P T N +I
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 63 QTNAFAGTGIEVALEILREMP-ERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
++ + + I R + ++ +Y ++ L ++ A ++ DM +
Sbjct: 133 ARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTI--YRVIDAHKLVFDMRN 190
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREM-------------LHRGGF-------- 160
+G LPD VT+ LI C + L A +F EM + GGF
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVET 250
Query: 161 ------------------SPDEHTYFNLMNCYCLQGEFSKAFHLHHEM---------VHK 193
S + NL++ C +G F+ F + M
Sbjct: 251 GRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAY 310
Query: 194 GFLPDFV------------------TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
G + D + G P +YNA+I+G C G A ++ E
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSE 370
Query: 236 MGLSPDTVSYRQVISGLCKIREPVKAYEL------KLEMDKKR------SCLSLNEDTYE 283
P +Y+ ++ LCK + KA + K D+ R L + ++ E
Sbjct: 371 FEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 284 TLMEQLS--------DEDTYSSLINDYLAQGDLEKAYQ-LDYVMGHDGYLSDNVTLSVLL 334
L +S DE T +++IN G ++ A + LD +M D VTL+ ++
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 335 NGLNKIARTTEA 346
GL R EA
Sbjct: 491 CGLLAQGRAEEA 502
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 56/362 (15%)
Query: 2 TEAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
EA +V+ + K G++ R ++ + + A K FR M +R + +N+
Sbjct: 197 VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNS 252
Query: 61 VIQTNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMK 116
V+ A+ G E A+E+++EM + G++ V++ +L+ +LGK A ++
Sbjct: 253 VLL--AYCQNGKHEEAVELVKEMEKEGISPGLVTW-----NILIGGYNQLGKCDAAMDLM 305
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN-CYC 175
+ M+ GI D T+ +I L G +A D+FR+M G P+ T + ++ C C
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF-LAGVVPNAVTIMSAVSACSC 364
Query: 176 LQGEFSKAFHLHHEMVHKGFLPDFVTGFS-----------------------PSLVTYNA 212
L+ ++ +H V GF+ D + G S + T+N+
Sbjct: 365 LK-VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNS 423
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
+I GYC G +A E+F M + L P+ +++ +ISG K + +A +L M+K
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
+ T++ +I Y+ G ++A +L M ++ ++VT+
Sbjct: 484 KV--------------QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 333 LL 334
LL
Sbjct: 530 LL 531
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 203/499 (40%), Gaps = 107/499 (21%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREM-------------- 46
+ +A +V + M + L T++ +I ++ +E+R + K+FR M
Sbjct: 131 IADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 47 ---------------------IDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
I G S L N+++ A G ++ A + R M ER
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE-LDFATKFFRRMRER 245
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
D +++ V+ A K +A E+ K+M+ +GI P VT+ +LI +G+
Sbjct: 246 ----DVIAWNSVLLAYC--QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT---- 201
A DL ++M G + D T+ +++ G +A + +M G +P+ VT
Sbjct: 300 AAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 202 -----------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
GF ++ N+L+ Y G++++A ++F +
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK---- 414
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
+ D ++ +I+G C+ KAYEL M +L + T++++
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA----NLRPNII-----------TWNTM 459
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDN-VTLSVLLNGLNKIARTTEAKWYLLWTVFFR 357
I+ Y+ GD +A L M DG + N T ++++ G + + EA L + F
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA-LELFRKMQFS 518
Query: 358 CFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLI 417
F MP + +L+ C+N L+G K+ + H +L N V N L
Sbjct: 519 RF-MPNSVTILSLLPACAN-----LLG------AKMVREIHGCVLRRNLDAIHAVKNALT 566
Query: 418 FDHSRSLEVHKAYNMYMEM 436
+++S ++ + +++ M
Sbjct: 567 DTYAKSGDIEYSRTIFLGM 585
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 160/383 (41%), Gaps = 58/383 (15%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E+++EM +G++P T+ LI + Q + A+ + ++M G + + T+ A+I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI--CALLLPPEEKLGKAFEMKKDMD 120
G + AL++ R+M G+ +AV+ + C+ L + + + E+
Sbjct: 325 SGLIHNGMRYQ-ALDMFRKMFLAGVVPNAVTIMSAVSACSCL----KVINQGSEVHSIAV 379
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G + D + L+D G+L +A +F + ++ D +T+ +++ YC G
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-----DVYTWNSMITGYCQAGYC 434
Query: 181 SKAFHLHHEMVHKGFLPDFVT------GF----------------------SPSLVTYNA 212
KA+ L M P+ +T G+ + T+N
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC-----KIREPVKAYELKLE 267
+I GY G+ EALE+FR M P++V+ ++ K+ + L+
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 268 MDKKRSCLSLNEDTY---------ETLMEQLSDED--TYSSLINDYLAQGDLEKAYQLDY 316
+D + + DTY T+ + +D T++SLI Y+ G A L
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 317 VMGHDGYLSDNVTLS--VLLNGL 337
M G + TLS +L +GL
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGL 637
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 199/510 (39%), Gaps = 94/510 (18%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAE+ L+ ++ +G TY L+ S C +S + ++ P +
Sbjct: 62 LLEAEKALDSLFQQGSKVKRSTYLKLLES-CIDSGSIHLGRILHARFGLFTEPDVFVETK 120
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ A G I A ++ M ER L ++ +I A E + + ++ + M
Sbjct: 121 LLSMYAKCGC-IADARKVFDSMRERNL----FTWSAMIGA--YSRENRWREVAKLFRLMM 173
Query: 121 DKGILPD--------------------SVTYEVLID---NLCW------------VGRLS 145
G+LPD V + V+I + C G L
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
A FR M R D + +++ YC G+ +A L EM + G SP
Sbjct: 234 FATKFFRRMRER-----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKE--------GISP 280
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
LVT+N LI GY LG+ A+++ + M G++ D ++ +ISGL +A ++
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 266 LEM---------------DKKRSCLSLNEDTYE-----TLMEQLSDEDTYSSLINDYLAQ 305
+M SCL + E M + D +SL++ Y
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 306 GDLEKAYQL-DYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
G LE A ++ D V D Y T + ++ G + +A Y L+T P
Sbjct: 401 GKLEDARKVFDSVKNKDVY-----TWNSMITGYCQAGYCGKA--YELFTRMQDANLRPNI 453
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
I ++T+I N + G A+ ++ G + + +NL+I + ++
Sbjct: 454 ITWNTMISGYIKNGDE---GEAMDLFQRME-------KDGKVQRNTATWNLIIAGYIQNG 503
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
+ +A ++ +M F+P+ ++L+L+ A
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPA 533
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 12/258 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + +M +GL P + ++ + + S A+K+F M +G P++ +Y
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I+ + + +E A+E +M + GL DA Y +I ++KL +E+ K+M
Sbjct: 374 MIR-DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG--FGTQKKLDTVYELLKEMQ 430
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+KG PD TY LI + A ++ +M+ P HT+ +M Y + +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ-NEIEPSIHTFNMIMKSYFMARNY 489
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+ EM+ KG PD +Y LI G G+ +EA M + G+
Sbjct: 490 EMGRAVWEEMIKKGICPD--------DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Query: 241 DTVSYRQVISGLCKIREP 258
+ Y + + + +P
Sbjct: 542 PLIDYNKFAADFHRGGQP 559
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 15/277 (5%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+VL + + TP+ TYT L++ +C+ +A +++ +MID+G P + +N +++
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLE-G 342
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A+++ M +G + SY +I + + A E DM D G+
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC--KQSSMETAIEYFDDMVDSGLQ 400
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD+ Y LI +L ++L +EM + G PD TY L+ Q A
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
++++M+ PS+ T+N ++ Y + ++ M + G+ PD SY
Sbjct: 460 IYNKMIQ--------NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSY 511
Query: 246 RQVISGLC---KIREPVKAYELKLEMDKKRSCLSLNE 279
+I GL K RE + E L+ K + N+
Sbjct: 512 TVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 151/366 (41%), Gaps = 73/366 (19%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VLEEM KGL E T+T + +F KAV +F M F ++T N ++ +
Sbjct: 217 VLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
A KLGK ++ D + P
Sbjct: 276 RA---------------------------------------KLGKEAQVLFDKLKERFTP 296
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+ +TY VL++ C V L EA ++ +M+ +G PD + ++ + S A L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQG-LKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
H M KG P+ + +Y +I +C ++ A+E F M + GL PD Y
Sbjct: 356 FHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLINDYLA 304
+I+G ++ YEL EM +K + TY L++ ++++ +++ I + +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 305 QGDLE----------KAYQL--DYVMGH--------DGYLSDNVTLSVLLNGLNKIARTT 344
Q ++E K+Y + +Y MG G D+ + +VL+ GL ++
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSR 525
Query: 345 EAKWYL 350
EA YL
Sbjct: 526 EACRYL 531
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A ++ M KG P+ R+YT +I FC++S A++ F +M+D G P Y +
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I T ++ E+L+EM E+G D +Y +I L+ ++ A + M
Sbjct: 410 I-TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI--KLMANQKMPEHATRIYNKMIQ 466
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
I P T+ +++ + ++ EM+ + G PD+++Y L+ +G+
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK-GICPDDNSYTVLIRGLIGEGKSR 525
Query: 182 KAFHLHHEMVHKG----------FLPDFVTGFSPSL 207
+A EM+ KG F DF G P +
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
F+P+++TY L+ G+C + + EA I+ M + GL PD V++ ++ GL + R+ A
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDG 322
+L M K C ++ +Y+ +I D+ Q +E A + M G
Sbjct: 354 KLFHVMKSKGPCPNVR---------------SYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 323 YLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRL 382
D + L+ G + Y L P Y+ LI+ +N +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTV--YELLKEMQEKGHPPDGKTYNALIKLMANQKMP-- 454
Query: 383 VGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH--SRSLEVHKAYNMYMEMVHYG 440
+ A + ++ M+ +P +N+++ + +R+ E+ +A ++ EM+ G
Sbjct: 455 ---------EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA--VWEEMIKKG 503
Query: 441 FVPHMFSVLALIKALHYDGRYNE 463
P S LI+ L +G+ E
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSRE 526
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
AL +LR+ PE + AD V+Y VI L + L A + K+MD G+ PD +TY +
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVI--RLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
I+ C G++ +A+ L +EM + + TY ++ C G+ +A L EM +
Sbjct: 207 INGYCNAGKIDDAWRLAKEM-SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKE- 264
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
D SP+ VTY +I +C RV+EAL + M G P+ V+ +I G+ +
Sbjct: 265 ---DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLE 321
Query: 255 IREPVKAYELKLEMDKKRSCLSLNE 279
E VKA ++ K +SL+E
Sbjct: 322 NDEDVKALSKLIDKLVKLGGVSLSE 346
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 126/294 (42%), Gaps = 37/294 (12%)
Query: 26 LIHSFC-QESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMP 83
++ + C Q + A +A+ V R+ + YN VI+ FA G + +A +++EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRL--FADKGDLNIADMLIKEMD 192
Query: 84 ERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGR 143
GL D ++Y +I K+ A+ + K+M + +SVTY +++ +C G
Sbjct: 193 CVGLYPDVITYTSMINGYC--NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGD 250
Query: 144 LSEAFDLFREMLHRGG---FSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
+ A +L EM G SP+ TY ++ +C + +A + M ++G +P+ V
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRV 310
Query: 201 TG-------------------FSPSLVTYNALIYGYC---------SLGRVQEALEIFRG 232
T LV + C + R +EA +IFR
Sbjct: 311 TACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL 370
Query: 233 MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
M G+ PD ++ V LC + + + L E++KK +++ D + L+
Sbjct: 371 MLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLL 424
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 29/204 (14%)
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
L D WV R F++ D Y ++ + +G+ + A L EM
Sbjct: 145 LADEALWVLRKFPEFNV----------CADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 194 GFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC 253
G PD ++TY ++I GYC+ G++ +A + + M + ++V+Y +++ G+C
Sbjct: 195 GLYPD--------VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 254 KIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQ 313
K + +A EL EM+K+ ++ + TY+ +I + + +E+A
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAV-----------TYTLVIQAFCEKRRVEEALL 295
Query: 314 LDYVMGHDGYLSDNVTLSVLLNGL 337
+ MG+ G + + VT VL+ G+
Sbjct: 296 VLDRMGNRGCMPNRVTACVLIQGV 319
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Query: 1 MTEAEEVLEEMYHKG----LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLD 56
M A E+L EM + ++P+ TYT +I +FC++ R +A+ V M +RG P+
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRV 310
Query: 57 TYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
T +IQ ++ +++ ++ + G ++S C + L ++ +A ++
Sbjct: 311 TACVLIQGVLENDEDVKALSKLIDKLVKLG--GVSLSECFSSATVSLIRMKRWEEAEKIF 368
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP-DEHTYFNLMNCYC 175
+ M +G+ PD + + LC + R + F L++E+ + S D + L+ C
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Query: 176 LQGEFSKAFHLHHEMVHK 193
QG +A L M+ K
Sbjct: 429 QQGNSWEAAKLAKSMLDK 446
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 186/460 (40%), Gaps = 51/460 (11%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A + +EM + L P TY+ LI SF +E A+ ++M S L Y+ +I+
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ A+ I + G+T D V+Y +I + + +A + K+M++ G
Sbjct: 234 LSRRL-CDYSKAISIFSRLKRSGITPDLVAYNSMIN--VYGKAKLFREARLLIKEMNEAG 290
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+LP++V+Y L+ + EA +F EM + + +L C + + +
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEM-------KEVNCALDLTTCNIMIDVYGQL 343
Query: 184 FHLHHEMVHKG---FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+MV + F P++V+YN ++ Y EA+ +FR M +
Sbjct: 344 -----DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQ 398
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME---QLSDEDTYSS 297
+ V+Y +I K E KA L EM + + N TY T++ + D ++
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSR--GIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 298 LINDYLAQG-DLEK--------AYQLDYVMG------HDGYLSDNVTLSVLLNGLNKIAR 342
L + G ++++ AY+ +MG H+ L DN+ + L K R
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGR 516
Query: 343 TTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTML 402
T EA W VF + F + D + C N + R I+ M
Sbjct: 517 TEEATW-----VFRQAFESGE--VKDISVFGCMINLYSR------NQRYVNVIEVFEKMR 563
Query: 403 HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFV 442
Y PD V +++ + + E KA +Y EM G V
Sbjct: 564 TAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 603
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 17/245 (6%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA + M K + + TY +I + + KA + +EM RG P+ TY+ +I
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
AG ++ A + +++ G+ D V Y +I A E++G K+ + +
Sbjct: 443 SIWGKAGK-LDRAATLFQKLRSSGVEIDQVLYQTMIVAY-----ERVGLMGHAKRLLHEL 496
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
LPD++ E I L GR EA +FR+ G D + ++N Y +
Sbjct: 497 K-LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK-DISVFGCMINLYSRNQRYVN 554
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG-LSPD 241
+ +M G+ PD +++ ++ Y ++A ++R M E G + PD
Sbjct: 555 VIEVFEKMRTAGYFPD------SNVIA--MVLNAYGKQREFEKADTVYREMQEEGCVFPD 606
Query: 242 TVSYR 246
V ++
Sbjct: 607 EVHFQ 611
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 16/256 (6%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A + + G+TP Y +I+ + + +A + +EM + G P+ +Y+ +
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL--LPPEEKLGKAFEMKKDM 119
+ +E AL + EM E D ++ C+++ + L ++ + F + M
Sbjct: 302 LSVYVENHKFLE-ALSVFAEMKEVNCALD-LTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D I P+ V+Y ++ EA LFR ++ R + TY ++ Y E
Sbjct: 360 D---IEPNVVSYNTILRVYGEAELFGEAIHLFR-LMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
KA +L EM + G P+ +TY+ +I + G++ A +F+ + G+
Sbjct: 416 HEKATNLVQEMQSR--------GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 240 PDTVSYRQVISGLCKI 255
D V Y+ +I ++
Sbjct: 468 IDQVLYQTMIVAYERV 483
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 60/245 (24%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREM 82
Y +IH C+ + +A +F ++ G P + TYN +I+ ++
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS---------------- 60
Query: 83 PERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVG 142
LG+A ++ +M +G++PD++TY +I LC
Sbjct: 61 --------------------------LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQN 94
Query: 143 RLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTG 202
+L++A + S T+ L+N YC +L EM +G + +
Sbjct: 95 KLAQARKV----------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVAN---- 140
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
++TY LI+G+ +G AL+IF+ M G+ ++++R ++ LC +E KA
Sbjct: 141 ----VITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAV 196
Query: 263 ELKLE 267
+ L+
Sbjct: 197 AMLLQ 201
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 115 MKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
M K M + + D+ Y ++I LC G+ EA ++F +L G PD TY N+M +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLI-SGLQPDVQTY-NMMIRF 58
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
+A L+ EM+ +G + P +TYN++I+G C ++ +A ++
Sbjct: 59 ---SSLGRAEKLYAEMIRRGLV--------PDTITYNSMIHGLCKQNKLAQARKV----- 102
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
S ++ +I+G CK L EM ++ +++ T
Sbjct: 103 ----SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRR---------------GIVANVIT 143
Query: 295 YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL 334
Y++LI+ + GD A + M +G S ++T +L
Sbjct: 144 YTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
AE++ EM +GL P TY +IH C++++ ++A KV S S T+N +I
Sbjct: 63 RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLI 113
Query: 63 QTNAFA-GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
N + T ++ + + EM RG+ A+ ++Y +I + A ++ ++M
Sbjct: 114 --NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGD--FNTALDIFQEMVS 169
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLF 151
G+ S+T+ ++ LC L +A +
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKAVAML 199
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 143/351 (40%), Gaps = 62/351 (17%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A + M + P T+ LI+ +C+ S+ A+ +FREM ++G P++ ++N
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I+ F +G K+ + +M +M
Sbjct: 269 LIR--GFLSSG------------------------------------KIEEGVKMAYEMI 290
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ G T E+L+D LC GR+ +A L ++L++ P E Y +L+ C + +
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL-PSEFDYGSLVEKLCGENKA 349
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + E+ KG P F + L+ G GR ++A M G+ P
Sbjct: 350 VRAMEMMEELWKKGQTPCF--------IACTTLVEGLRKSGRTEKASGFMEKMMNAGILP 401
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D+V++ ++ LC A L+L K YE DE TY L++
Sbjct: 402 DSVTFNLLLRDLCSSDHSTDANRLRLLASSK---------GYE------PDETTYHVLVS 446
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLL 351
+ +G ++ L M L D T + L++GL+ + + + +L
Sbjct: 447 GFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRML 497
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 145/360 (40%), Gaps = 55/360 (15%)
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM 190
+ ID C ++ A F M P+ Y ++N Y G+ KA + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
+ PD + T+N LI GYC + AL++FR M E G P+ VS+ +I
Sbjct: 220 GKERAKPD--------VCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 251 GLC---KIREPVK-AYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT------------ 294
G KI E VK AYE+ +E+ + +E T E L++ L E
Sbjct: 272 GFLSSGKIEEGVKMAYEM-IELGCR-----FSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 295 ----------YSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTT 344
Y SL+ + +A ++ + G + + L+ GL K RT
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 345 EAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLH 403
+A ++ +P + ++ L+ + CS++ T + ++ + A
Sbjct: 386 KASGFM--EKMMNAGILPDSVTFNLLLRDLCSSDH--------STDANRLRLLASSK--- 432
Query: 404 GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNE 463
Y+PD T Y++L+ ++ + + EM+ +P +F+ L+ L G+++
Sbjct: 433 -GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 114 EMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNC 173
E+ ++M +G++ ++VTY LI L G A ++F+EM+ G PD TY L++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPDIMTYNILLDG 60
Query: 174 YCLQGEFSKAFHLHHEMVHKG---FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIF 230
C G+ KA L V G F + G P++VTY +I G+C G +EA +F
Sbjct: 61 LCKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 231 RGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS 290
R M E G PD+ +Y +I + + + EL EM RSC
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM---RSC------------RFAG 163
Query: 291 DEDTYSSLINDYLAQGDLEKAY 312
D TY L+ D L G L+K +
Sbjct: 164 DASTY-GLVTDMLHDGRLDKGF 184
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 76 LEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLI 135
+E+ REM +RGL + V+Y +I L + + A E+ K+M G+ PD +TY +L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM--AQEIFKEMVSDGVPPDIMTYNILL 58
Query: 136 DNLCWVGRLSEA---------FDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
D LC G+L +A +DLF + + G P+ TY +++ +C +G +A+ L
Sbjct: 59 DGLCKNGKLEKALVAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
+M G LPD +G TYN LI + G + E+ + M + D +Y
Sbjct: 118 FRKMKEDGPLPD--SG------TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Query: 247 QV 248
V
Sbjct: 170 LV 171
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 79/197 (40%), Gaps = 32/197 (16%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E+ EM +GL + TYT LI Q A ++F+EM+ G P + TYN ++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 66 AFAGTGIEVALEILREMPERGLTADAV-SYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
G E+ L A V + C+L L KG+
Sbjct: 62 CKNGK------------LEKALVAGKVEDGWDLFCSLSL------------------KGV 91
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
P+ VTY +I C G EA+ LFR+M G PD TY L+ + G+ + +
Sbjct: 92 KPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASA 150
Query: 185 HLHHEMVHKGFLPDFVT 201
L EM F D T
Sbjct: 151 ELIKEMRSCRFAGDAST 167
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 33/175 (18%)
Query: 149 DLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLV 208
+LFREM RG + TY L+ G+ A + EMV G PD ++
Sbjct: 2 ELFREMSQRG-LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPD--------IM 52
Query: 209 TYNALIYGYCSLGRVQEAL---------EIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
TYN L+ G C G++++AL ++F + G+ P+ V+Y +ISG CK
Sbjct: 53 TYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKE 112
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
+AY L +M ED L D TY++LI +L GD + +L
Sbjct: 113 EAYTLFRKM---------KEDG------PLPDSGTYNTLIRAHLRDGDKAASAEL 152
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
L EM +G + + VTY LI G G A EIF+ M G+ PD ++
Sbjct: 2 ELFREMSQRGLVGN--------TVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMT 53
Query: 245 YRQVISGLCKIREPVKA-YELKLEMDKKRSC-LSLNEDTYETLMEQLSDEDTYSSLINDY 302
Y ++ GLCK + KA K+E C LSL + TY+++I+ +
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVV--------TYTTMISGF 105
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL 334
+G E+AY L M DG L D+ T + L+
Sbjct: 106 CKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 5 EEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
E + EM + G +P+ +Y L+ ++C S+A KV+ EM RG + YN +I
Sbjct: 265 ERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI- 323
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ + A E+ R+M +G+ ++Y H++ + G + ++M KG
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSG--LVVYREMKRKG 381
Query: 124 ILPDSVTYEVLIDNLCW---VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
D +T E L++ LC R+ EA D+ ++ + F P + Y L+ C G+
Sbjct: 382 FEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKM 441
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLG 221
+A ++ EMV K GF PS TY A I GY +G
Sbjct: 442 DRALNIQAEMVGK--------GFKPSQETYRAFIDGYGIVG 474
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDR-GFSPSLDTYNAVIQTNAFAGTGI-E 73
+ P+ T+ ++ SF +E +++REM + G SP++ +YN +++ A+ G+
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLME--AYCARGLMS 298
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
A ++ EM RG+ D V+Y +I L E + KA E+ +DM KGI +TYE
Sbjct: 299 EAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE--VVKAKELFRDMGLKGIECTCLTYEH 356
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK---AFHLHHEM 190
L++ C G + ++REM R GF D T L+ C + + A + +
Sbjct: 357 LVNGYCKAGDVDSGLVVYREM-KRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDA 415
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
V + F PS Y L+ C G++ AL I M G P +YR I
Sbjct: 416 VREAM-------FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFID 468
Query: 251 GLCKIREPVKAYELKLEM 268
G + + + L +EM
Sbjct: 469 GYGIVGDEETSALLAIEM 486
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 168/420 (40%), Gaps = 100/420 (23%)
Query: 38 KAVKVFREMIDR----GFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVS 93
+ +KVFR +I G +P + ++ +I++ I+ A+ ++R++ RG+ A +S
Sbjct: 143 RVLKVFRSLIKSYNRCGSAPFV--FDLLIKS-CLDSKEIDGAVMVMRKLRSRGINAQ-IS 198
Query: 94 YCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFRE 153
C+ AL+ + G + K + G+ SV D ++
Sbjct: 199 TCN---ALITEVSRRRGASNGYKMYREVFGLDDVSV-------------------DEAKK 236
Query: 154 MLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNAL 213
M+ G P+ T+ ++M + +GE + EM + G SP++ +YN L
Sbjct: 237 MI--GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEE-------VGCSPNVYSYNVL 287
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD-KKR 272
+ YC+ G + EA +++ M G+ D V+Y +I GLC E VKA EL +M K
Sbjct: 288 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 347
Query: 273 SCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSV 332
C L TY L+N Y GD++ + M G+ +D +T+
Sbjct: 348 ECTCL----------------TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEA 391
Query: 333 LLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVK 392
L+ GL C + + +R+V A VK
Sbjct: 392 LVEGL------------------------------------CDDRDGQRVVEAADI--VK 413
Query: 393 VAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
A++ + P Y LL+ ++ +A N+ EMV GF P + A I
Sbjct: 414 DAVR------EAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M+EAE+V EEM +G+ Y +I C KA ++FR+M +G + TY
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPE-EKLGKAFEMKKDM 119
++ AG ++ L + REM +G AD ++ ++ L + +++ +A ++ KD
Sbjct: 357 LVNGYCKAGD-VDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDA 415
Query: 120 DDKGIL-PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+ + P YE+L+ LC G++ A ++ EM+ + GF P + TY ++ Y + G
Sbjct: 416 VREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK-GFKPSQETYRAFIDGYGIVG 474
Query: 179 EFSKAFHLHHEMVH 192
+ + L EM
Sbjct: 475 DEETSALLAIEMAE 488
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 35/267 (13%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
LI S AV V R++ RG + + T NA+I T G ++ RE+
Sbjct: 168 LIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALI-TEVSRRRGASNGYKMYREV--- 223
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
D VS + ++ +GK I P++ T+ ++ + G
Sbjct: 224 -FGLDDVS--------VDEAKKMIGK------------IKPNATTFNSMMVSFYREGETE 262
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
++REM G SP+ ++Y LM YC +G S+A + EM +G + D
Sbjct: 263 MVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD------- 315
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+V YN +I G CS V +A E+FR M G+ ++Y +++G CK + +
Sbjct: 316 -IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVY 374
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLSDE 292
EM KR + T E L+E L D+
Sbjct: 375 REM--KRKGFEADGLTIEALVEGLCDD 399
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 21 RTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILR 80
++ LI+ KA F D P+ ++N +I+ E A ++
Sbjct: 152 QSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK-GFLDKCDWEAACKVFD 210
Query: 81 EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
EM E + V+Y +I L + +GKA + +DM K I P++VT+ +L+ LC
Sbjct: 211 EMLEMEVQPSVVTYNSLIG--FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
G +EA L +M +RG P Y LM+ +G +A L EM + PD
Sbjct: 269 KGEYNEAKKLMFDMEYRG-CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD-- 325
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
+V YN L+ C+ RV EA + M G P+ +YR +I G C+I +
Sbjct: 326 ------VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIED 376
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 20/281 (7%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ---TNAFAGTGI 72
L P+ ++ LI F + A KVF EM++ PS+ TYN++I N G
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK-- 239
Query: 73 EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYE 132
A +L +M ++ + +AV++ ++ L E +A ++ DM+ +G P V Y
Sbjct: 240 --AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE--YNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
+L+ +L GR+ EA L EM R PD Y L+N C + +A+ + EM
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRR-IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGL 252
KG P+ TY +I G+C + L + M P ++ +++GL
Sbjct: 355 KGC--------KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Query: 253 CKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED 293
K A + M KK LS ++ L+ L +D
Sbjct: 407 IKGGNLDHACFVLEVMGKKN--LSFGSGAWQNLLSDLCIKD 445
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 21/306 (6%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
+++L + ++ + E + LI + + KA+ VF ++ ++ + N +I
Sbjct: 100 VDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLI- 158
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPE-EKLGKAFEMKKDMDD 121
N G +E A + L ++VS+ +I L + E K F+ +M+
Sbjct: 159 -NVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME- 216
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+ P VTY LI LC + +A L +M+ + P+ T+ LM C +GE++
Sbjct: 217 --VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR-IRPNAVTFGLLMKGLCCKGEYN 273
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+A L +M ++G P LV Y L+ GR+ EA + M + + PD
Sbjct: 274 EAKKLMFDMEYRGC--------KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME---QLSDEDTYSSL 298
V Y +++ LC +AY + EM K C N TY +++ ++ D D+ ++
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMK-GC-KPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 299 INDYLA 304
+N LA
Sbjct: 384 LNAMLA 389
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 30/267 (11%)
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
P+ V++N LI G+ + A ++F M EM + P V+Y +I LC+ + KA
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDG 322
L +M KKR + N T+ LM+ L +G+ +A +L + M + G
Sbjct: 242 SLLEDMIKKR--IRPNAVTFGLLMKGLC-------------CKGEYNEAKKLMFDMEYRG 286
Query: 323 YLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKR 381
V +L++ L K R EAK LL + P +IY+ L+ + C+
Sbjct: 287 CKPGLVNYGILMSDLGKRGRIDEAK--LLLGEMKKRRIKPDVVIYNILVNHLCTE----- 339
Query: 382 LVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
V A + M KP+ Y ++I R + N+ M+
Sbjct: 340 -------CRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 442 VPHMFSVLALIKALHYDGRYNEMSWVI 468
P + + ++ L G + +V+
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVL 419
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 12/249 (4%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++ M KGL P +RTY L++ +C + +A + EM RGF+P + +I+
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
AG +E A E++ +M + G D ++ +I A+ E + EM G
Sbjct: 261 GLLNAGY-LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF--CIEMYYTACKLG 317
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ D TY+ LI + +G++ EAF L + G P Y ++ C G F A
Sbjct: 318 LCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVE-DGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
F +M V P+ Y LI G+ +A M EMGL P +
Sbjct: 377 FSFFSDMK--------VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISR 428
Query: 244 SYRQVISGL 252
+ V GL
Sbjct: 429 CFDMVTDGL 437
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA+E L+EM +G P R LI A ++ +M GF P + T+N
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNI 292
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKK 117
+I+ + +G +E +E+ + GL D +Y L+P K+GK AF +
Sbjct: 293 LIEAISKSGE-VEFCIEMYYTACKLGLCVDIDTY-----KTLIPAVSKIGKIDEAFRLLN 346
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+ + G P Y +I +C G +AF F +M + P+ Y L+
Sbjct: 347 NCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK-AHPPNRPVYTMLITMCGRG 405
Query: 178 GEFSKAFHLHHEMVHKGFLP 197
G+F A + EM G +P
Sbjct: 406 GKFVDAANYLVEMTEMGLVP 425
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 130/342 (38%), Gaps = 38/342 (11%)
Query: 103 LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP 162
L +K +++ K M D + T +I+ G + +A +LF + G
Sbjct: 121 LASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQ 180
Query: 163 DEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
Y +L++ C F A+ L M+ KG PD TY L+ G+CS G+
Sbjct: 181 TVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPD--------KRTYAILVNGWCSAGK 232
Query: 223 VQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTY 282
++EA E M G +P +I GL A E+ +M K
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF--------- 283
Query: 283 ETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIAR 342
+ D T++ LI G++E ++ Y G D T L+ ++KI +
Sbjct: 284 ------VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 343 TTEAKWYLLWTVFFRCFGMPAYIIYDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTM 401
EA + L P +Y +I+ C N F A +F + +KAH
Sbjct: 338 IDEA--FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFD----DAFSFFSDMKVKAH--- 388
Query: 402 LHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
P+ VY +LI R + A N +EM G VP
Sbjct: 389 -----PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 120/283 (42%), Gaps = 27/283 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E + VL++ G+ P Y I R ++A +V ++ F D +A+I
Sbjct: 276 ERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI 335
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEK--LGKAFEMKKDMD 120
+ + + A+E L M G A+ + L ++ L KA+E+ +
Sbjct: 336 --GSVSAVDPDSAVEFLVYMVSTG-KLPAIRTLSKLSKNLCRHDKSDHLIKAYEL---LS 389
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
KG + +Y ++I LC GR+ E++ +EM + G +PD Y L+ C
Sbjct: 390 SKGYFSELQSYSLMISFLCKAGRVRESYTALQEM-KKEGLAPDVSLYNALIEACCKAEMI 448
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A L EM FV G +L TYN LI G +E+L +F M E G+ P
Sbjct: 449 RPAKKLWDEM--------FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP 500
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLE--MDKKRSCLSLNEDT 281
D Y +I GLCK E K+E M+ R C+ + T
Sbjct: 501 DETIYMSLIEGLCK--------ETKIEAAMEVFRKCMERDHKT 535
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 21/298 (7%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+VL+ M +G+ P T + SF + +A+++F E G S +++NA+++
Sbjct: 172 DVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRC- 230
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DMDDK 122
+ + A + + + D+ SY +++ KLG+ EM+K +M +
Sbjct: 231 LCERSHVSAAKSVF-NAKKGNIPFDSCSY-----NIMISGWSKLGEVEEMEKVLKEMVES 284
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD ++Y LI+ L GR++++ ++F + H+G PD + Y ++ + +F +
Sbjct: 285 GFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV-PDANVYNAMICNFISARDFDE 343
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ + M+ + P+L TY+ L+ G +V +ALEIF M G+ P T
Sbjct: 344 SMRYYRRMLDEEC--------EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTT 395
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
+ LC P A + + +K C ++E Y+ L+++LS L+N
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVI-YQKSRKAGC-RISESAYKLLLKRLSRFGKCGMLLN 451
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 12/231 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ ++ E+ + + HKG P Y +I +F ++++ +R M+D P+L+TY+
Sbjct: 306 INDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSK 365
Query: 61 VIQTNAFAGTGIEVALEILREMPERGL---TADAVSYCHVICALLLPPEEKLGKAFEMKK 117
++ + G + ALEI EM RG+ T S+ +C+ PP A + +
Sbjct: 366 LV-SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYG-PPH----AAMVIYQ 419
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
G Y++L+ L G+ +++ EM G+ D Y +++ C+
Sbjct: 420 KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM-QESGYPSDVEVYEYIVDGLCII 478
Query: 178 GEFSKAFHLHHEMVHKGFLPD-FV-TGFSPSLVTYNALIYGYCSLGRVQEA 226
G A + E + KGF P+ FV + S L+ N Y ++++A
Sbjct: 479 GHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKA 529
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 133/317 (41%), Gaps = 31/317 (9%)
Query: 30 FCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTA 89
F Q+ + A++ + + G S+D V+ +G + + P G+T
Sbjct: 94 FLQKLKGKSAIQ--KSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREP--GVTK 149
Query: 90 DAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFD 149
D SY ++ AL + ++ K M +G+ PD + +D+ V + A +
Sbjct: 150 DVGSYSVILRAL--GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIE 207
Query: 150 LFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
LF E G ++ L+ C C + S A + + KG +P F +
Sbjct: 208 LFEES-ESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIP-----FDS--CS 257
Query: 210 YNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
YN +I G+ LG V+E ++ + M E G PD +SY +I GL + + E+ +
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 270 KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
K + D + Y+++I ++++ D +++ + M + + T
Sbjct: 318 HK---------------GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Query: 330 LSVLLNGLNKIARTTEA 346
S L++GL K + ++A
Sbjct: 363 YSKLVSGLIKGRKVSDA 379
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 46/270 (17%)
Query: 73 EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK-GILPDSVTY 131
E A ++ EMPE S+ ++ A + +KL +A + K++ +K GI PD VTY
Sbjct: 139 EHAHKLFDEMPELNCERTVKSFNALLSAYV--NSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
+I LC G + + +F E L + GF PD ++ L+ + + F + + M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEE-LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 192 HKGFLPDFVT---------------------------GFSPSLVTYNALIYGYCSLGRVQ 224
K P+ + G SP + TYNALI Y ++
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYET 284
E ++ + M E GL+PDTV+Y +I LCK + +A E+ E K +
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK------------ 363
Query: 285 LMEQLSDEDTYSSLINDYLAQGDLEKAYQL 314
LS + Y ++ + G +++A QL
Sbjct: 364 ---LLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR-GFSPSLDTYNAVI 62
A ++ +EM +++ L+ ++ + +A+K F+E+ ++ G +P L TYN +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD---- 118
+ G+ ++ L I E+ + G D +S+ ++ EE + ++ D
Sbjct: 201 KALCRKGSMDDI-LSIFEELEKNGFEPDLISFNTLL-------EEFYRRELFVEGDRIWD 252
Query: 119 -MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
M K + P+ +Y + L + ++A +L +++ G SPD HTY L+ Y +
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALITAYRVD 311
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
+ ++EM KG PD VTY LI C G + A+E+
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPD--------TVTYCMLIPLLCKKGDLDRAVEV 355
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 22/271 (8%)
Query: 1 MTEAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
+ EA + +E+ K G+TP TY +I + C++ + +F E+ GF P L ++N
Sbjct: 173 LDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFN 232
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+++ +E I M + L+ + SY + L +K A + M
Sbjct: 233 TLLEEFYRRELFVE-GDRIWDLMKSKNLSPNIRSYNSRVRGLTR--NKKFTDALNLIDVM 289
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+GI PD TY LI L E + EM + G +PD TY L+ C +G+
Sbjct: 290 KTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK-GLTPDTVTYCMLIPLLCKKGD 348
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI---------F 230
+A + E + L P++ Y ++ G++ EA ++ F
Sbjct: 349 LDRAVEVSEEAIKHKLLS------RPNM--YKPVVERLMGAGKIDEATQLVKNGKLQSYF 400
Query: 231 RGMPEMGLSPDTVSYRQVISGLCKIREPVKA 261
R +P++ + V S PV +
Sbjct: 401 RYLPDLSAGKKKTTSSPVSSSAKTTSTPVSS 431
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 15/277 (5%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+VL + + TP+ TYT L++ +C+ +A +++ +MID G P + +N +++
Sbjct: 283 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE-G 341
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A+++ M +G + SY +I + + A E DM D G+
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC--KQSSMETAIEYFDDMVDSGLQ 399
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD+ Y LI +L ++L +EM + G PD TY L+ Q
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHGTR 458
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
++++M+ PS+ T+N ++ Y + ++ M + G+ PD SY
Sbjct: 459 IYNKMIQ--------NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 510
Query: 246 RQVISGLC---KIREPVKAYELKLEMDKKRSCLSLNE 279
+I GL K RE + E L+ K + N+
Sbjct: 511 TVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 148/366 (40%), Gaps = 73/366 (19%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VLEEM KGL E T+T + +F KAV +F M F ++T N ++ +
Sbjct: 216 VLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 274
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
A KLGK ++ D + P
Sbjct: 275 RA---------------------------------------KLGKEAQVLFDKLKERFTP 295
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+ +TY VL++ C V L EA ++ +M+ G PD + ++ + S A L
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG-LKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
H M KG P+ + +Y +I +C ++ A+E F M + GL PD Y
Sbjct: 355 FHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLINDYLA 304
+I+G ++ YEL EM +K + TY L++ ++++ + + I + +
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 305 QGDLE----------KAY--QLDYVMGH--------DGYLSDNVTLSVLLNGLNKIARTT 344
Q ++E K+Y +Y MG G D+ + +VL+ GL ++
Sbjct: 465 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 524
Query: 345 EAKWYL 350
EA YL
Sbjct: 525 EACRYL 530
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 34/194 (17%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A ++ M KG P+ R+YT +I FC++S A++ F +M+D G P Y +
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI--CALLLPPEEK----------- 108
I T ++ E+L+EM E+G D +Y +I A PE
Sbjct: 409 I-TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 467
Query: 109 ----------------LGKAFEMKK----DMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
+ + +EM + +M KGI PD +Y VLI L G+ EA
Sbjct: 468 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREAC 527
Query: 149 DLFREMLHRGGFSP 162
EML +G +P
Sbjct: 528 RYLEEMLDKGMKTP 541
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
F+P+++TY L+ G+C + + EA I+ M + GL PD V++ ++ GL + + A
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDG 322
+L M K C ++ +Y+ +I D+ Q +E A + M G
Sbjct: 353 KLFHVMKSKGPCPNVR---------------SYTIMIRDFCKQSSMETAIEYFDDMVDSG 397
Query: 323 YLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRL 382
D + L+ G + Y L P Y+ LI+ +N +
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTV--YELLKEMQEKGHPPDGKTYNALIKLMANQKMP-- 453
Query: 383 VGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH--SRSLEVHKAYNMYMEMVHYG 440
+ + ++ M+ +P +N+++ + +R+ E+ +A ++ EM+ G
Sbjct: 454 ---------EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA--VWDEMIKKG 502
Query: 441 FVPHMFSVLALIKALHYDGRYNE 463
P S LI+ L +G+ E
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSRE 525
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 15/277 (5%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+VL + + TP+ TYT L++ +C+ +A +++ +MID G P + +N +++
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE-G 342
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A+++ M +G + SY +I + + A E DM D G+
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC--KQSSMETAIEYFDDMVDSGLQ 400
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD+ Y LI +L ++L +EM + G PD TY L+ Q
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHGTR 459
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
++++M+ PS+ T+N ++ Y + ++ M + G+ PD SY
Sbjct: 460 IYNKMIQ--------NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 511
Query: 246 RQVISGLC---KIREPVKAYELKLEMDKKRSCLSLNE 279
+I GL K RE + E L+ K + N+
Sbjct: 512 TVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 148/366 (40%), Gaps = 73/366 (19%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
VLEEM KGL E T+T + +F KAV +F M F ++T N ++ +
Sbjct: 217 VLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
A KLGK ++ D + P
Sbjct: 276 RA---------------------------------------KLGKEAQVLFDKLKERFTP 296
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+ +TY VL++ C V L EA ++ +M+ G PD + ++ + S A L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHG-LKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
H M KG P+ + +Y +I +C ++ A+E F M + GL PD Y
Sbjct: 356 FHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED--TYSSLINDYLA 304
+I+G ++ YEL EM +K + TY L++ ++++ + + I + +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 305 QGDLE----------KAY--QLDYVMGH--------DGYLSDNVTLSVLLNGLNKIARTT 344
Q ++E K+Y +Y MG G D+ + +VL+ GL ++
Sbjct: 466 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 525
Query: 345 EAKWYL 350
EA YL
Sbjct: 526 EACRYL 531
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 34/194 (17%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++A ++ M KG P+ R+YT +I FC++S A++ F +M+D G P Y +
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVI--CALLLPPEEK----------- 108
I T ++ E+L+EM E+G D +Y +I A PE
Sbjct: 410 I-TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE 468
Query: 109 ----------------LGKAFEMKK----DMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
+ + +EM + +M KGI PD +Y VLI L G+ EA
Sbjct: 469 IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREAC 528
Query: 149 DLFREMLHRGGFSP 162
EML +G +P
Sbjct: 529 RYLEEMLDKGMKTP 542
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 203 FSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAY 262
F+P+++TY L+ G+C + + EA I+ M + GL PD V++ ++ GL + + A
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 263 ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDG 322
+L M K C ++ +Y+ +I D+ Q +E A + M G
Sbjct: 354 KLFHVMKSKGPCPNVR---------------SYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 323 YLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRL 382
D + L+ G + Y L P Y+ LI+ +N +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTV--YELLKEMQEKGHPPDGKTYNALIKLMANQKMP-- 454
Query: 383 VGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH--SRSLEVHKAYNMYMEMVHYG 440
+ + ++ M+ +P +N+++ + +R+ E+ +A ++ EM+ G
Sbjct: 455 ---------EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA--VWDEMIKKG 503
Query: 441 FVPHMFSVLALIKALHYDGRYNE 463
P S LI+ L +G+ E
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSRE 526
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 32/329 (9%)
Query: 41 KVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICA 100
+VF EM R + TY ++ A A ++ A+ + E G+ D V++ ++
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYA-AAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMW 222
Query: 101 LLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGF 160
L + + + + D ++++ C +G + EA +++++
Sbjct: 223 LCRYKHVEFAETLFCSRRRE---FGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIA-SKC 278
Query: 161 SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSL 220
PD +Y ++N +G+ KA L+ M + T +P + N +I C
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAM--------WDTRRNPDVKICNNVIDALCFK 330
Query: 221 GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
R+ EALE+FR + E G P+ V+Y ++ LCKIR K +EL EM+ K S N+
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390
Query: 281 TYETLME--QLSDE-----------------DTYSSLINDYLAQGDLEKAYQLDYVMGHD 321
T+ L++ Q S + D Y+ + Y+ EK ++ M
Sbjct: 391 TFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERS 450
Query: 322 GYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
G D T ++ ++GL+ + EA Y
Sbjct: 451 GLGPDQRTYTIRIHGLHTKGKIGEALSYF 479
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMPE 84
+++ +C +A + ++++I P + +Y +I NA G + A+E+ R M +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI--NALTKKGKLGKAMELYRAMWD 310
Query: 85 RGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRL 144
D +VI AL ++++ +A E+ +++ +KG P+ VTY L+ +LC + R
Sbjct: 311 TRRNPDVKICNNVIDALCF--KKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRT 368
Query: 145 SEAFDLFREMLHRGGF-SPDEHTYFNLMN-------------------CYCLQGEFSKAF 184
+ ++L EM +GG SP++ T+ L+ C ++ F
Sbjct: 369 EKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMF 428
Query: 185 HLH-----HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
L+ E V + + +G P TY I+G + G++ EAL F+ M G+
Sbjct: 429 RLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Query: 240 PD 241
P+
Sbjct: 489 PE 490
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A E+ M+ P + +I + C + R +A++VFRE+ ++G P++ TYN+
Sbjct: 298 LGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNS 357
Query: 61 VIQTNAFAGTGIEVALEILREMPERG--------------------------LTADAVSY 94
+++ + E E++ EM +G L A +
Sbjct: 358 LLK-HLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNK 416
Query: 95 CHVICAL------LLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF 148
C + L L +K K E+ +M+ G+ PD TY + I L G++ EA
Sbjct: 417 CEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEAL 476
Query: 149 DLFREMLHRG 158
F+EM+ +G
Sbjct: 477 SYFQEMMSKG 486
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I P ++TY +ID C R+ +A + M +G SPD T+ L+N YC
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNG 64
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ EM +G + + VTY LI+G+C +G + A ++ M G++PD +
Sbjct: 65 MEIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 116
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDK 270
++ +++GLC +E KA+ + ++ K
Sbjct: 117 TFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
P+ +TYN++I G+C RV +A + M G SPD V++ +I+G CK + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 265 KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
EM ++ +++ TY++LI+ + GDL+ A L M G
Sbjct: 68 FCEMHRRGI---------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 325 SDNVTLSVLLNGL 337
D +T +L GL
Sbjct: 113 PDYITFHCMLAGL 125
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT 70
M + P TY +I FC++ R A ++ M +G SP + T++ +I A
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 71 GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVT 130
++ +EI EM RG+ A+ V+Y +I + L A ++ +M G+ PD +T
Sbjct: 61 -VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD--LDAAQDLLNEMISCGVAPDYIT 117
Query: 131 YEVLIDNLCWVGRLSEAFDLFREM 154
+ ++ LC L +AF + ++
Sbjct: 118 FHCMLAGLCSKKELRKAFAILEDL 141
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 157 RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYG 216
R P TY ++++ +C Q A + M KG SP +VT++ LI G
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC--------SPDVVTFSTLING 54
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
YC RV +EIF M G+ +TV+Y +I G C++ + A +L EM
Sbjct: 55 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A+ +L+ M KG +P T++ LI+ +C+ R +++F EM RG + TY +I
Sbjct: 28 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 87
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+ F G ++ A ++L EM G+ D +++ H + A L +E L KAF + +D+
Sbjct: 88 --HGFCQVGDLDAAQDLLNEMISCGVAPDYITF-HCMLAGLCSKKE-LRKAFAILEDL 141
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 147/397 (37%), Gaps = 94/397 (23%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSP---SLDTYNAVIQTNAFAGTGIEV 74
P + Y L Q +F EM+ S S + YN VIQ A A +EV
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKA-EKLEV 261
Query: 75 ALEILREMPERGLTADAVSYCHVICALL---LPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
A ++ E G D +Y +++ L LP KAFE+ + M+ L D TY
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLP-----YKAFEIYESMEKTDSLLDGSTY 316
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRG--------------------------------- 158
E++I +L GRL AF LF++M R
Sbjct: 317 ELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQG 376
Query: 159 -GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF------------------ 199
G P + +L++ Y G+ A L EM GF P+F
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 200 ---------VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
GF P+ TY+ L+ + G+V A++I+ M GL P SY +++
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLT 496
Query: 251 GLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEK 310
L R A ++ LEM K S++ + LM Y+ ++
Sbjct: 497 LLANKRLVDVAGKILLEM--KAMGYSVDVCASDVLM--------------IYIKDASVDL 540
Query: 311 AYQLDYVMGHDGYLSDNVTL-----SVLLNGLNKIAR 342
A + MG G ++N + S + NGL AR
Sbjct: 541 ALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSAR 577
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A E+ E M TY +I S + R A K+F++M +R PS +++++
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ AG ++ ++++ EM G A + +I + KL A + +M
Sbjct: 356 DSMGKAGR-LDTSMKVYMEMQGFGHRPSATMFVSLIDS--YAKAGKLDTALRLWDEMKKS 412
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G P+ Y ++I++ G+L A +F++M + GF P TY L+ + G+
Sbjct: 413 GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDM-EKAGFLPTPSTYSCLLEMHAGSGQVDS 471
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A +++ M + G P L +Y +L+ + V A +I M MG S D
Sbjct: 472 AMKIYNSMTN--------AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 129/332 (38%), Gaps = 40/332 (12%)
Query: 114 EMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNC 173
E++ +D +P+ V + +L V + A LFR + + P + Y L +
Sbjct: 158 ELETQLDKLQFVPNMVH---ITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDG 214
Query: 174 YCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM 233
+F L EMV D + S YN +I +++ A F+
Sbjct: 215 LNQGRDFVGIQSLFEEMVQ-----DSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKA 269
Query: 234 PEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED 293
E G DT +Y ++ P KA+E+ M+K S L D
Sbjct: 270 QESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL---------------DGS 314
Query: 294 TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIAR-TTEAKWYLLW 352
TY +I G L+ A++L M S L++ + K R T K Y+
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME- 373
Query: 353 TVFFRCFG-MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGT 411
+ FG P+ ++ +LI++ A + A++ M ++P+
Sbjct: 374 ---MQGFGHRPSATMFVSLIDSY-----------AKAGKLDTALRLWDEMKKSGFRPNFG 419
Query: 412 VYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
+Y ++I H++S ++ A ++ +M GF+P
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 136/321 (42%), Gaps = 36/321 (11%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIE 73
K + P+E T +I C+E R + V + + + PS+ N + IE
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSV-IVNTSLVFRVLEEMRIE 286
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
++ +L+ + + + D + Y V+ A E L A ++ +M +G +S Y V
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAK--AKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHK 193
+ C G + EA L EM G SP + T+ L+ + G K MV +
Sbjct: 345 FVRVCCEKGDVKEAERLLSEM-EESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 194 GFLP----------------------DFVT-----GFSPSLVTYNALIYGYCSLGRVQEA 226
G +P + +T GF P TY+ LI G+ + +A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 227 LEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLM 286
L++F M +SP +R +I GLC + V+A E L++ KKR + N D Y+ L+
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGK-VEAGEKYLKIMKKR-LIEPNADIYDALI 521
Query: 287 ---EQLSDEDTYSSLINDYLA 304
+++ D+ + N+ ++
Sbjct: 522 KAFQKIGDKTNADRVYNEMIS 542
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAE +L EM G++P++ T+ CLI F + K ++ M+ RG PS +N
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++++ + + A EIL + ++G D +Y H+I + + +A ++ +M+
Sbjct: 415 MVKSVS-KIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFI--EGNDIDQALKLFYEME 471
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ + P + LI LC G++ EA + + +++ + P+ Y L+ + G+
Sbjct: 472 YRKMSPGFEVFRSLIVGLCTCGKV-EAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDK 530
Query: 181 SKAFHLHHEMV 191
+ A +++EM+
Sbjct: 531 TNADRVYNEMI 541
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 145/364 (39%), Gaps = 60/364 (16%)
Query: 42 VFREMIDRGFSPSLDTYNAVIQTNAFAGTG-----------------IEVALEILRE-MP 83
VF+ + D GF+ S+ T N +I ++ + E+ + I+ + +
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLC 245
Query: 84 ERGLTADAVSYCHVICALLLPP--------------EEKLGKAFEMKKDMDDKGILPDSV 129
+ G + V IC P E ++ ++ + K + K ++ D++
Sbjct: 246 KEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTI 305
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
Y +++ G L A +F EML R GFS + Y + C +G+ +A L E
Sbjct: 306 GYSIVVYAKAKEGDLVSARKVFDEMLQR-GFSANSFVYTVFVRVCCEKGDVKEAERLLSE 364
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M +G SP T+N LI G+ G ++ LE M GL P ++ +++
Sbjct: 365 MEE--------SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMV 416
Query: 250 SGLCKIREPVKAYE-LKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
+ KI +A E L +DK + DE TYS LI ++ D+
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGF----------------VPDEHTYSHLIRGFIEGNDI 460
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYD 368
++A +L Y M + L+ GL + + YL + + P IYD
Sbjct: 461 DQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL--KIMKKRLIEPNADIYD 518
Query: 369 TLIE 372
LI+
Sbjct: 519 ALIK 522
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 14/234 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A +V +EM +G + + YT + C++ +A ++ EM + G SP +T+N
Sbjct: 320 LVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNC 379
Query: 61 VIQTNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I FA G E LE M RGL ++ ++ + + E + +A E+
Sbjct: 380 LI--GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS--VSKIENVNRANEILTKS 435
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
DKG +PD TY LI + +A LF EM +R SP + +L+ C G+
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR-KMSPGFEVFRSLIVGLCTCGK 494
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM 233
+A + +++ K + P+ Y+ALI + +G A ++ M
Sbjct: 495 V-EAGEKYLKIMKKRLI-------EPNADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 3 EAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA+ V EM G+ P TY +I FC+ AS + + EM +G P+ ++ +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I + +A + ++L M +RG+ +Y I +L + K KA + M
Sbjct: 229 I-SGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKA--LLDGMLS 285
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G+ P++VTY LI C EA LF+ M++RG PD YF L+ C G+F
Sbjct: 286 AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC-KPDSECYFTLIYYLCKGGDFE 344
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
A L E + K ++P F +L+ G +V+EA E+ + E
Sbjct: 345 TALSLCKESMEKNWVPSF--------SIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 20/244 (8%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDR-GFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
+ CL+ +E++ +V+ EM G P L+TYN +I+ + I+ E
Sbjct: 159 FACLVAKDYKEAK-----RVYIEMPKMYGIEPDLETYNRMIKVFC-ESGSASSSYSIVAE 212
Query: 82 MPERGLTADAVSYCHVICALLLPPE-EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
M +G+ ++ S+ +I + +++GK M M D+G+ TY + I +LC
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM---MKDRGVNIGVSTYNIRIQSLCK 269
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
+ EA L ML G P+ TY +L++ +C + +F +A L MV++G PD
Sbjct: 270 RKKSKEAKALLDGMLS-AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
F+ LIY C G + AL + + E P + +++GL K + +
Sbjct: 329 CYFT--------LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEE 380
Query: 261 AYEL 264
A EL
Sbjct: 381 AKEL 384
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 16/270 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E +VL EM +G+ P E T+ L+H + + S +++ MI +G P+ + AV
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAV- 985
Query: 63 QTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
T++ G ++ AL++ + M +G + I L+ E + KA + +
Sbjct: 986 -TSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGE-IPKAEDFLTRVTR 1043
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
G++ + Y+ +I L G L A L ML P +Y +++N +
Sbjct: 1044 NGMMAPN--YDNIIKKLSDRGNLDIAVHLLNTMLKNQSI-PGSSSYDSVINGLLRYNQLD 1100
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
KA H EMV G SPS+ T++ L++ +C +V E+ + + M +G SP
Sbjct: 1101 KAMDFHTEMVE--------LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPS 1152
Query: 242 TVSYRQVISGLCKIREPVKAYELKLEMDKK 271
++ VI + VKA E+ +EM +K
Sbjct: 1153 QEMFKTVIDRFRVEKNTVKASEM-MEMMQK 1181
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 172/476 (36%), Gaps = 100/476 (21%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI- 62
A V++ + +G + Y LI C E + S A + EM+D+ PSL + +I
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 63 ---QTNAFAGTGIEVALEI---------LREMPERGLTADAVSYCHVICALLLPPEEKL- 109
+ N AGT +A +I ++ + G DA + ++ + L K+
Sbjct: 783 RLCRANK-AGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIY 841
Query: 110 -------------GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH 156
K E+ M K I+ +Y + +C + A L +E L
Sbjct: 842 NVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISL-KEFLL 900
Query: 157 RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYG 216
G +P +N++ Y + + +H V+K L G P T+N L++G
Sbjct: 901 LGESNPGGVIIYNMLIFYMFRAK-------NHLEVNKVLLEMQGRGVLPDETTFNFLVHG 953
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLS 276
Y S +L M G+ P+ S R V S LC + KA +L M+ K
Sbjct: 954 YSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGW--- 1010
Query: 277 LNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
L + ++ +++G++ KA + +G ++ N
Sbjct: 1011 -----------NLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN--------- 1050
Query: 337 LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIK 396
YD +I+ S+ ++ +A+
Sbjct: 1051 ------------------------------YDNIIKKLSDRG-----------NLDIAVH 1069
Query: 397 AHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
+TML P + Y+ +I R ++ KA + + EMV G P + + L+
Sbjct: 1070 LLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLV 1125
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 34/258 (13%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFS---PSLDTYNAVIQTNAF 67
M KGL P Y LI + R A ++ + ++ ++D+ VI+
Sbjct: 209 MRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCL 268
Query: 68 AGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
++ A + R++ G ++ Y K+ + K+D +D
Sbjct: 269 -DQKVQEARVLARKLVALGCILNSSIY------------SKITIGYNEKQDFEDLLSFIG 315
Query: 128 SVTYE--VLIDN-----LCWVGRL-SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
V YE V + N LC R SE ++ E L GF DE T+ L+ C +G+
Sbjct: 316 EVKYEPDVFVGNRILHSLC--RRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGD 373
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
+A E++ KG+ PD + +YNA++ G G Q I M E G+
Sbjct: 374 IKRAVLYLSEIMSKGYKPD--------VYSYNAILSGLFRKGLWQHTHCILDEMKENGMM 425
Query: 240 PDTVSYRQVISGLCKIRE 257
+++ +++G CK R+
Sbjct: 426 LSLSTFKIMVTGYCKARQ 443
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 113/297 (38%), Gaps = 35/297 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +AE L M GL+ + + Y + +C+ + K +V M+ + S+ +Y
Sbjct: 819 MLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYRE 878
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK--- 117
++ + + E L ++ +I +L+ + E+ K
Sbjct: 879 YVRKMCLEPQSLSAI-----SLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLL 933
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M +G+LPD T+ L+ S + M+ + G P+ + + + C
Sbjct: 934 EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISK-GMKPNNRSLRAVTSSLCDN 992
Query: 178 GEFSKAFHLHHEM--------------------VHKGFLP---DFVTGFSPSLV---TYN 211
G+ KA L M + KG +P DF+T + + + Y+
Sbjct: 993 GDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYD 1052
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
+I G + A+ + M + P + SY VI+GL + + KA + EM
Sbjct: 1053 NIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEM 1109
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 5/207 (2%)
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGK-AFEMKKDMDDKGILPD 127
G + + LR++ R + V+ + C + EE K A M + PD
Sbjct: 140 GNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPD 199
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRG-GFSPDEHTYFNLMNCYC---LQGEFSKA 183
Y +I+ LC VG +A L +M G + PD +TY L++ YC +Q KA
Sbjct: 200 VYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKA 259
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
++ F GF P +VTYN LI G C R+ ALE+F M G P+ V
Sbjct: 260 IRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQV 319
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDK 270
+Y I E A E+ M K
Sbjct: 320 TYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 26/243 (10%)
Query: 24 TCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREM 82
TCL+ +E +A+ F M + P + YN +I NA G + A +L +M
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTII--NALCRVGNFKKARFLLDQM 226
Query: 83 PERGLTADAVSYCHVI-------------CALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
G +Y + I C + ++ +A M ++M +G +PD V
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAI--RRRMWEANRMFREMLFRGFVPDVV 284
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
TY LID C R+ A +LF +M +G P++ TY + + Y + E A +
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCV-PNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M G P TY LI+ R EA ++ M E GL P +Y+ V
Sbjct: 344 MKKLGH-------GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 250 SGL 252
L
Sbjct: 397 DAL 399
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 161 SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSL 220
PD + Y ++N C G F KA L +M GF + P TY LI YC
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFR------YPPDTYTYTILISSYCRY 250
Query: 221 G-----------RVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMD 269
G R+ EA +FR M G PD V+Y +I G CK +A EL +M
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDM- 309
Query: 270 KKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY-LSDNV 328
K + C + ++ TY+S I Y ++E A ++ M G+ + +
Sbjct: 310 KTKGC--------------VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSS 355
Query: 329 TLSVLLNGLNKIARTTEAK 347
T + L++ L + R EA+
Sbjct: 356 TYTPLIHALVETRRAAEAR 374
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA + EM +G P TY CLI C+ +R +A+++F +M +G P+ TYN+
Sbjct: 264 MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNS 323
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVS-YCHVICALLLPPEEKLGKAFEMKKDM 119
I+ + IE A+E++R M + G S Y +I AL+ + +A ++ +M
Sbjct: 324 FIRYYSVTNE-IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALV--ETRRAAEARDLVVEM 380
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
+ G++P TY+++ D L G L+ D E LH+ + Y +M
Sbjct: 381 VEAGLVPREYTYKLVCDALSSEG-LASTLD---EELHKRMREGIQQRYSRVMK 429
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 14/192 (7%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV--- 74
P Y +I++ C+ KA + +M GF DTY I +++ G++
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 75 ---------ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A + REM RG D V+Y +I ++G+A E+ +DM KG +
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC--KTNRIGRALELFEDMKTKGCV 315
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
P+ VTY I + A ++ R M G P TY L++ ++A
Sbjct: 316 PNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARD 375
Query: 186 LHHEMVHKGFLP 197
L EMV G +P
Sbjct: 376 LVVEMVEAGLVP 387
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 221 GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
G V+EAL F M E PD +Y +I+ LC++ KA L +M + D
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM--QLPGFRYPPD 236
Query: 281 TYETLMEQLSDEDTYSSLINDYLAQG-----------DLEKAYQLDYVMGHDGYLSDNVT 329
TY TY+ LI+ Y G + +A ++ M G++ D VT
Sbjct: 237 TY-----------TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 330 LSVLLNGL---NKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPA 386
+ L++G N+I R E L+ +P + Y++ I S
Sbjct: 286 YNCLIDGCCKTNRIGRALE-----LFEDMKTKGCVPNQVTYNSFIRYYS----------- 329
Query: 387 ITFSVKVAIKAHHTMLH-GNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHM 445
+T ++ AI+ TM G+ P + Y LI + +A ++ +EMV G VP
Sbjct: 330 VTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPRE 389
Query: 446 FSVLALIKALHYDGRYNEMSWVIHNTLR 473
++ + AL +G + + +H +R
Sbjct: 390 YTYKLVCDALSSEGLASTLDEELHKRMR 417
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +V + M P TY +I+ + + S++ + K++ EM P++ TY A++
Sbjct: 269 EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALV 328
Query: 63 QTNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKKD 118
NAFA G+ E A EI ++ E GL D Y L+ + G A E+
Sbjct: 329 --NAFAREGLCEKAEEIFEQLQEDGLEPDVYVY-----NALMESYSRAGYPYGAAEIFSL 381
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G PD +Y +++D G S+A +F EM R G +P ++ L++ Y
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKAR 440
Query: 179 EFSKAFHLHHEMVHKGFLPD-FVTG--------------------------FSPSLVTYN 211
+ +K + EM G PD FV + + TYN
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
LI Y G ++ E+F + E PD V++ I + + VK E+ EM
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 139/356 (39%), Gaps = 42/356 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSP---SLDTYN 59
EAE + ++ P E TY LI ++C +A V EM + SP + YN
Sbjct: 195 EAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYN 254
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
A I+ E A+++ + M +Y +I L K ++++ +M
Sbjct: 255 AYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN--LYGKASKSYMSWKLYCEM 312
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
P+ TY L++ G +A ++F E L G PD + Y LM Y G
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIF-EQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A + M H G PD +YN ++ Y G +A +F M +G++
Sbjct: 372 PYGAAEIFSLMQHMGCEPD--------RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA 423
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYE--------------TL 285
P S+ ++S K R+ K + EM + + DT+ T
Sbjct: 424 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN----GVEPDTFVLNSMLNLYGRLGQFTK 479
Query: 286 MEQL----------SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLS 331
ME++ +D TY+ LIN Y G LE+ +L + + D VT +
Sbjct: 480 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 44/284 (15%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
EM P+ TYT L+++F +E KA ++F ++ + G P + YNA++++ + AG
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 70 TGIEVALEILREMPERGLTADAVSY-----------CHVICALLLPPEEKLGKAFEMK-- 116
A EI M G D SY H + ++LG A MK
Sbjct: 371 YPYGAA-EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 117 --------------------KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH 156
K+M + G+ PD+ +++ +G+ ++ + EM
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM-E 488
Query: 157 RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYG 216
G + D TY L+N Y G + L E+ K F PD +VT+ + I
Sbjct: 489 NGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD--------VVTWTSRIGA 540
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
Y + LE+F M + G +PD + + ++S C E V+
Sbjct: 541 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSEEQVE 583
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 70/330 (21%)
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD + + +LID + EA L+ ++L + P E TY L+ YC+ G +A
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLE-SRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSL-GRVQEALEIFRGMPEMGLSPDTVS 244
+ EM + P + + YNA I G G +EA+++F+ M P T +
Sbjct: 234 VLVEMQNHHVSPKTI-----GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
Y +I+ K + +++L EM + ++ TY++L+N +
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC---------------TYTALVNAFAR 333
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
+G EKA ++ + DG P
Sbjct: 334 EGLCEKAEEIFEQLQEDGL-------------------------------------EPDV 356
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
+Y+ L+E+ S + G A FS+ M H +PD YN+++ + R+
Sbjct: 357 YVYNALMESYSRAGYP--YGAAEIFSL---------MQHMGCEPDRASYNIMVDAYGRAG 405
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
A ++ EM G P M S + L+ A
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++AE V EEM G+ P +++ L+ ++ + +K + +EM + G P N++
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 62 IQTNAFAGTGIEVALE-ILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKK 117
+ N + G +E IL EM TAD +Y +L+ K G + E+
Sbjct: 468 L--NLYGRLGQFTKMEKILAEMENGPCTADISTY-----NILINIYGKAGFLERIEELFV 520
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
++ +K PD VT+ I + ++F EM+ G +PD T L++ +
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMID-SGCAPDGGTAKVLLSACSSE 579
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+ + + M HKG V+ P L+
Sbjct: 580 EQVEQVTSVLRTM-HKGVT---VSSLVPKLMA 607
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 36/326 (11%)
Query: 18 PHERT----YTC--LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG 71
P E T Y C ++ + + +K+F +M G P + TYN ++ G
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 72 IEVALEILREMPERGLTADAVSYCHV--ICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
A+E++ E+P G+ D+V Y V ICA EE A + M +G P+
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEE----AENFIQQMKVEGHSPNIY 273
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
Y L+++ W G +A +L EM G P++ L+ Y G F ++ L E
Sbjct: 274 HYSSLLNSYSWKGDYKKADELMTEM-KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE 332
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
+ G++ + + Y L+ G G+++EA IF M G+ D + +I
Sbjct: 333 LES--------AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMI 384
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLE 309
S LC+ + +A EL + +E TYE D ++++ Y G++E
Sbjct: 385 SALCRSKRFKEAKELSRD----------SETTYEK-----CDLVMLNTMLCAYCRAGEME 429
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLN 335
++ M D T +L+
Sbjct: 430 SVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 124/273 (45%), Gaps = 20/273 (7%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A E++ E+ H G+ Y ++ R+ +A ++M G SP++ Y++++
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKKDM 119
+ ++ G + A E++ EM GL + V+ LL K G ++ E+ ++
Sbjct: 280 NSYSWKGD-YKKADELMTEMKSIGLVPN-----KVMMTTLLKVYIKGGLFDRSRELLSEL 333
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ G + + Y +L+D L G+L EA +F +M +G S D + +++ C
Sbjct: 334 ESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS-DGYANSIMISALCRSKR 392
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSP-SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
F +A L D T + LV N ++ YC G ++ + + + M E +
Sbjct: 393 FKEAKELSR---------DSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAV 443
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
SPD ++ +I K + + AY+ L+M K
Sbjct: 444 SPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSK 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 25/242 (10%)
Query: 107 EKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+ + KA E+ + + D+ + ++ L G+L LF +M R G PD T
Sbjct: 145 KNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQM-KRDGLKPDVVT 203
Query: 167 YFNLM-NCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
Y L+ C ++ + KA L E+ H G D V Y ++ S GR +E
Sbjct: 204 YNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVM--------YGTVLAICASNGRSEE 255
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETL 285
A + M G SP+ Y +++ + KA EL EM S+ + +
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK------SIGLVPNKVM 309
Query: 286 MEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTE 345
M ++L+ Y+ G +++ +L + GY + + +L++GL+K + E
Sbjct: 310 M---------TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 346 AK 347
A+
Sbjct: 361 AR 362
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 23/239 (9%)
Query: 3 EAEEVLEEMYHK-GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA V EM G+ P TY +I C+ S + + EM + P+ ++ +
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I + + +++R M E G+ +Y +I L K K+ E K +D
Sbjct: 224 ID-GFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC-----KRKKSAEAKALID- 276
Query: 122 KGIL-----PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
G++ P+SVTY +LI C L EA +LF E++ G+ PD YF L++C C
Sbjct: 277 -GVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLF-EVMVCNGYKPDSECYFTLIHCLCK 334
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
G+F A L E + K ++P F S++ + L+ G S +V EA E+ + E
Sbjct: 335 GGDFETALILCRESMEKNWVPSF------SVMKW--LVNGLASRSKVDEAKELIAVVKE 385
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 13/218 (5%)
Query: 38 KAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER-GLTADAVSYCH 96
++++ FR + ++ + NA++ A E A + EMP+ G+ D +Y
Sbjct: 129 RSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKE-ANRVYLEMPKMYGIEPDLETYNR 187
Query: 97 VICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH 156
+I +L ++ + +M+ K I P + ++ ++ID + E + R M+
Sbjct: 188 MI--RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR-MMD 244
Query: 157 RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYG 216
G TY ++ C C + + ++A L ++ P+ VTY+ LI+G
Sbjct: 245 EFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS--------CRMRPNSVTYSLLIHG 296
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
+CS + EA+ +F M G PD+ Y +I LCK
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
EA ++ EM G PD TY ++ C G S ++ + EM K P
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWI--------KP 215
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+ ++ +I G+ + E ++ R M E G+ +Y +I LCK + K+ E K
Sbjct: 216 TAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRK---KSAEAK 272
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLS 325
+D SC + TYS LI+ + ++ +L++A L VM +GY
Sbjct: 273 ALIDGVMSC------------RMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKP 320
Query: 326 DNVTLSVLLNGLNK 339
D+ L++ L K
Sbjct: 321 DSECYFTLIHCLCK 334
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA +V + M P TY +I+ + + S++ + K++ EM P++ TY A++
Sbjct: 247 EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALV 306
Query: 63 QTNAFAGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKKD 118
NAFA G+ E A EI ++ E GL D Y L+ + G A E+
Sbjct: 307 --NAFAREGLCEKAEEIFEQLQEDGLEPDVYVY-----NALMESYSRAGYPYGAAEIFSL 359
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M G PD +Y +++D G S+A +F EM R G +P ++ L++ Y
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKAR 418
Query: 179 EFSKAFHLHHEMVHKGFLPD-FVTG--------------------------FSPSLVTYN 211
+ +K + EM G PD FV + + TYN
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 478
Query: 212 ALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEM 268
LI Y G ++ E+F + E PD V++ I + + VK E+ EM
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 139/356 (39%), Gaps = 42/356 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSP---SLDTYN 59
EAE + ++ P E TY LI ++C +A V EM + SP + YN
Sbjct: 173 EAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYN 232
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
A I+ E A+++ + M +Y +I L K ++++ +M
Sbjct: 233 AYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN--LYGKASKSYMSWKLYCEM 290
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
P+ TY L++ G +A ++F E L G PD + Y LM Y G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIF-EQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A + M H G PD +YN ++ Y G +A +F M +G++
Sbjct: 350 PYGAAEIFSLMQHMGCEPD--------RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA 401
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYE--------------TL 285
P S+ ++S K R+ K + EM + + DT+ T
Sbjct: 402 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN----GVEPDTFVLNSMLNLYGRLGQFTK 457
Query: 286 MEQL----------SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLS 331
ME++ +D TY+ LIN Y G LE+ +L + + D VT +
Sbjct: 458 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 44/284 (15%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
EM P+ TYT L+++F +E KA ++F ++ + G P + YNA++++ + AG
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 70 TGIEVALEILREMPERGLTADAVSY-----------CHVICALLLPPEEKLGKAFEMK-- 116
A EI M G D SY H + ++LG A MK
Sbjct: 349 YPYGAA-EIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
Query: 117 --------------------KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH 156
K+M + G+ PD+ +++ +G+ ++ + EM
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM-E 466
Query: 157 RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYG 216
G + D TY L+N Y G + L E+ K F PD +VT+ + I
Sbjct: 467 NGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD--------VVTWTSRIGA 518
Query: 217 YCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
Y + LE+F M + G +PD + + ++S C E V+
Sbjct: 519 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSEEQVE 561
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 70/330 (21%)
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD + + +LID + EA L+ ++L + P E TY L+ YC+ G +A
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLE-SRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSL-GRVQEALEIFRGMPEMGLSPDTVS 244
+ EM + P + + YNA I G G +EA+++F+ M P T +
Sbjct: 212 VLVEMQNHHVSPKTI-----GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
Y +I+ K + +++L EM + ++ TY++L+N +
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC---------------TYTALVNAFAR 311
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAY 364
+G EKA ++ + DG P
Sbjct: 312 EGLCEKAEEIFEQLQEDGL-------------------------------------EPDV 334
Query: 365 IIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSL 424
+Y+ L+E+ S + G A FS+ M H +PD YN+++ + R+
Sbjct: 335 YVYNALMESYSRAGYP--YGAAEIFSL---------MQHMGCEPDRASYNIMVDAYGRAG 383
Query: 425 EVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
A ++ EM G P M S + L+ A
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++AE V EEM G+ P +++ L+ ++ + +K + +EM + G P N++
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 62 IQTNAFAGTGIEVALE-ILREMPERGLTADAVSYCHVICALLLPPEEKLG---KAFEMKK 117
+ N + G +E IL EM TAD +Y +L+ K G + E+
Sbjct: 446 L--NLYGRLGQFTKMEKILAEMENGPCTADISTY-----NILINIYGKAGFLERIEELFV 498
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
++ +K PD VT+ I + ++F EM+ G +PD T L++ +
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMID-SGCAPDGGTAKVLLSACSSE 557
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVT 209
+ + + M HKG V+ P L+
Sbjct: 558 EQVEQVTSVLRTM-HKGVT---VSSLVPKLMA 585
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+ EEM G+ P+ Y LI S + R +A +++++I GF+P+ TY A+++
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD-KGIL 125
A G + AL I REM E+GL+ + Y ++ + + +AFE+ +DM + +
Sbjct: 362 RARYGDD-ALAIYREMKEKGLSLTVILYNTLLS--MCADNRYVDEAFEIFQDMKNCETCD 418
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PDS T+ LI GR+SEA +M GF P +++ CY +
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQM-REAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 186 LHHEMVHKGFLPD 198
+++ G PD
Sbjct: 478 TFDQVLELGITPD 490
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 15/252 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ ++E++ +EM +G+ P T+T +I Q +AV+ F +M G P T A
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I AG +++AL + DAV++ +I + + ++M
Sbjct: 251 MIDAYGRAGN-VDMALSLYDRARTEKWRIDAVTFSTLI--RIYGVSGNYDGCLNIYEEMK 307
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
G+ P+ V Y LID++ R +A ++++++ GF+P+ TY L+ Y
Sbjct: 308 ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRARYG 366
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR-VQEALEIFRGMPEM-GL 238
A ++ EM K G S +++ YN L+ C+ R V EA EIF+ M
Sbjct: 367 DDALAIYREMKEK--------GLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETC 417
Query: 239 SPDTVSYRQVIS 250
PD+ ++ +I+
Sbjct: 418 DPDSWTFSSLIT 429
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
+E + ++ EM ERG+ D ++ +I K +A E + M G PD+VT
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPK--RAVEWFEKMSSFGCEPDNVTM 248
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
+ID G + A L+ + + D T+ L+ Y + G + +++ EM
Sbjct: 249 AAMIDAYGRAGNVDMALSLY-DRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMK 307
Query: 192 HKGFLPDFV---------------------------TGFSPSLVTYNALIYGYCSLGRVQ 224
G P+ V GF+P+ TY AL+ Y
Sbjct: 308 ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGD 367
Query: 225 EALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYET 284
+AL I+R M E GLS + Y ++S R +A+E+ +M ++C + + D++
Sbjct: 368 DALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM---KNCETCDPDSW-- 422
Query: 285 LMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGY 323
T+SSLI Y G + +A M G+
Sbjct: 423 ---------TFSSLITVYACSGRVSEAEAALLQMREAGF 452
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 12/279 (4%)
Query: 13 HKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRG-FSPSLDTYNAVIQTNAFAGTG 71
G+ P+ TY + ++ + A++ ++ ID +PS+ T+ +++ +
Sbjct: 158 QAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVK-GLVSNDN 216
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK--GILPDSV 129
+E A+EI +M +G D V Y +++ + ++ +++ +K G + D V
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV--KNSDADGVLKLYQELKEKLGGFVDDGV 274
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFN-LMNCYCLQGEFSKAFHLHH 188
Y L+ EA + + E + +N ++ G+F +A L
Sbjct: 275 VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF- 333
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
+ V K P + +L T+N ++ GYC+ G+ +EA+E+FR M + SPDT+S+ +
Sbjct: 334 DAVKKEHNPP--RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
++ LC +A +L EM++K + +E TY LM+
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKN--VKPDEYTYGLLMD 428
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 136/302 (45%), Gaps = 28/302 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR--GFSPSLDTY 58
+ +A E+ E+M KG Y+ L+ + S A +K+++E+ ++ GF Y
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVY 276
Query: 59 NAVIQTNAFAGTGIEVALEILREM--PERGLTADAVSYCHVICALLLPPEEKLGKAFEM- 115
+++ F + A+E E + A++Y +V+ A L K +A ++
Sbjct: 277 GQLMK-GYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEA--LSENGKFDEALKLF 333
Query: 116 ---KKDMDDKGILPDSV-TYEVLIDNLCWVGRLSEAFDLFREMLHRGGF--SPDEHTYFN 169
KK+ + L ++ T+ V+++ C G+ EA ++FR+M G F SPD ++ N
Sbjct: 334 DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM---GDFKCSPDTLSFNN 390
Query: 170 LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEI 229
LMN C ++A L+ EM K PD TY L+ G++ E
Sbjct: 391 LMNQLCDNELLAEAEKLYGEMEEKNVKPD--------EYTYGLLMDTCFKEGKIDEGAAY 442
Query: 230 FRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
++ M E L P+ Y ++ L K K + K D S L ++++ Y+ +M L
Sbjct: 443 YKTMVESNLRPNLAVYNRLQDQLIKAG---KLDDAKSFFDMMVSKLKMDDEAYKFIMRAL 499
Query: 290 SD 291
S+
Sbjct: 500 SE 501
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 1 MTEAEEVLEEMYHKGLTPHER------TYTCLIHSFCQESRASKAVKVFREMIDRGFSP- 53
M E E+ E Y + + + + Y ++ + + + +A+K+F + + + +P
Sbjct: 285 MKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-DAVKKEHNPP 343
Query: 54 -----SLDTYNAVIQTNAF-AGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEE 107
+L T+N ++ N + AG E A+E+ R+M + + D +S+ +++ L E
Sbjct: 344 RHLAVNLGTFNVMV--NGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLC--DNE 399
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
L +A ++ +M++K + PD TY +L+D G++ E ++ M+ P+ Y
Sbjct: 400 LLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE-SNLRPNLAVY 458
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
L + G+ A MV K + D Y ++ GR+ E L
Sbjct: 459 NRLQDQLIKAGKLDDAKSFFDMMVSKLKMDD---------EAYKFIMRALSEAGRLDEML 509
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCK 254
+I M L DTV + + K
Sbjct: 510 KIVDEM----LDDDTVRVSEELQEFVK 532
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 170/457 (37%), Gaps = 91/457 (19%)
Query: 50 GFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKL 109
G +P++ TYN + Q E+ALE + + +++ ++ L+ + L
Sbjct: 160 GIAPNIITYNLIFQA-YLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVS-NDNL 217
Query: 110 GKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR-GGFSPDEHTYF 168
KA E+K+DM KG + D V Y L+ L++E+ + GGF D Y
Sbjct: 218 EKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYG 277
Query: 169 NLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALE 228
LM Y ++ +A + E V + + S + YN ++ G+ EAL+
Sbjct: 278 QLMKGYFMKEMEKEAMECYEEAVGEN------SKVRMSAMAYNYVLEALSENGKFDEALK 331
Query: 229 IFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ 288
+F D V K P + + L
Sbjct: 332 LF----------DAVK---------KEHNPPRHLAVNL---------------------- 350
Query: 289 LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKW 348
T++ ++N Y A G E+A ++ MG D ++ + L+N L EA+
Sbjct: 351 ----GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 349 YLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKP 408
L+ P Y L++ C FK + + TM+ N +P
Sbjct: 407 --LYGEMEEKNVKPDEYTYGLLMDTC----FKE-------GKIDEGAAYYKTMVESNLRP 453
Query: 409 DGTVYNLL--------IFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGR 460
+ VYN L D ++S + M+ Y F+ ++AL GR
Sbjct: 454 NLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFI---------MRALSEAGR 504
Query: 461 YNEMSWVIHNTLRSCNLSDSELLKVLNEI-DFSKPEM 496
+EM ++ L D + ++V E+ +F K E+
Sbjct: 505 LDEMLKIVDEML------DDDTVRVSEELQEFVKEEL 535
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 18/243 (7%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREM 82
Y ++ +E+ + EM+ RG SP+ T NA + AG ++ ALE+ R
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF-VDEALELYRSR 418
Query: 83 PERGLTADAVSY---CHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLC 139
E G A+SY H +CA E + +A+++ K D+G T+ L + LC
Sbjct: 419 SEIGFAPTAMSYNYLIHTLCA-----NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALC 473
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
W G+ A +L R P +++ C G+ A ++ E+ +K
Sbjct: 474 WKGKPDMARELVIAAAERD-LLPKRIAGCKIISALCDVGKVEDALMIN-ELFNK------ 525
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
+G S + +LIYG +L R A ++ M E G +P YR VI +C++
Sbjct: 526 -SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGE 584
Query: 260 KAY 262
K +
Sbjct: 585 KNF 587
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/517 (20%), Positives = 206/517 (39%), Gaps = 109/517 (21%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
++L EM +G++P+++T + FC+ +A++++R + GF+P+ +YN +I T
Sbjct: 378 DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHT- 436
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
A +E A ++L+ +RG ++ + AL + + + E+ ++ +L
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR--ELVIAAAERDLL 494
Query: 126 PDSVTYEVLIDNLCWVGRLSEA---------------FDLFREMLH------RG------ 158
P + +I LC VG++ +A F +F +++ RG
Sbjct: 495 PKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKL 554
Query: 159 -------GFSPDEHTYFNLMNCYC-------------LQGEFS------KAFHLHHEMVH 192
G++P Y N++ C C L+ + S +A++L E
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAG 614
Query: 193 KGFLPDFVT---------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
P G +P++ + ++ Y ++ +AL F + E G + +
Sbjct: 615 FAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL 674
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS---SLIN 300
Y+ +I GLCK + A EM K L + + YE +++L +E+ Y L+N
Sbjct: 675 -YQVMIVGLCKANKLDDAMHFLEEM--KGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVN 731
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
++ G A+ + V+ H+ S V Y WT
Sbjct: 732 EFRKSGRRITAF-IGNVLLHNAMKSKGV--------------------YEAWTRMRN--- 767
Query: 361 MPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDH 420
I D + E S E L I ++V +K ++ Y D YN+L+
Sbjct: 768 -----IEDKIPEMKSLGELIGLFSGRI--DMEVELKRLDEVIEKCYPLDMYTYNMLL--- 817
Query: 421 SRSL---EVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
R + + AY M + G+VP+ + + L +A
Sbjct: 818 -RMIVMNQAEDAYEMVERIARRGYVPNERTDMILERA 853
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 123/311 (39%), Gaps = 72/311 (23%)
Query: 28 HSFCQESRASKAVKVFREMIDR--GFSP---SLDTYNAVIQTNAFAGTGIEVALEILREM 82
H+ + R +K V + + +DR GF SL +A++ A AG ++AL+ M
Sbjct: 150 HAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGR-TDIALQHFGNM 208
Query: 83 PERGLTADAVSYCHVICALLLPPEEK-------------------------LGKAFEMKK 117
RGL D+ Y HV+ L+ EEK L K F +
Sbjct: 209 RFRGLDLDSFGY-HVLLNALV--EEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQG 265
Query: 118 DMDD-----KGILPDSVT-----YEVLIDNLCWVGRLSEAFDLFREM------------- 154
+D+ + +LP+ +L+D LC + EA L E+
Sbjct: 266 KLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYN 325
Query: 155 -----LHRGGFSPDEHTYFN----LMNCYCLQGEF-SKAFHLHHEM----VHKGFLPDFV 200
L + GF + + L C + S F L E V+ V
Sbjct: 326 IWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMV 385
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
G SP+ T NA + +C G V EALE++R E+G +P +SY +I LC +
Sbjct: 386 RGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQ 445
Query: 261 AYE-LKLEMDK 270
AY+ LK +D+
Sbjct: 446 AYDVLKGAIDR 456
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD TY LI LC G+ +A ++ E L G PD TY L+ C A
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDE-LKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
++ EM + GF+PD + YN L+ G +V EA ++F M + G+ +Y
Sbjct: 346 IYGEMQYNGFVPD--------TIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTY 397
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQ 305
+I GL + + L ++ KK Q D T+S + +
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKK---------------GQFVDAITFSIVGLQLCRE 442
Query: 306 GDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIAR 342
G LE A +L M G+ D VT+S LL G +K R
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 12/235 (5%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT 70
+Y P TY LIH C +A A+ V+ E+ G P TY +IQ
Sbjct: 280 VYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ-GCCKSY 338
Query: 71 GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVT 130
++ A+ I EM G D + Y ++ L K+ +A ++ + M +G+ T
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL--KARKVTEACQLFEKMVQEGVRASCWT 396
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM 190
Y +LID L GR F LF ++ +G F D T+ + C +G+ A L EM
Sbjct: 397 YNILIDGLFRNGRAEAGFTLFCDLKKKGQFV-DAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
+ GFS LVT ++L+ G+ GR ++ + + E L P+ + +
Sbjct: 456 ETR--------GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 185/486 (38%), Gaps = 75/486 (15%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
V +E+ G P TY LI C+ R A++++ EM GF P YN ++
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLD-GT 369
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
+ A ++ +M + G+ A +Y +I L + G F + D+ KG
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG--FTLFCDLKKKGQFV 427
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
D++T+ ++ LC G+L A L EM R GFS D T +L+ + QG + L
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETR-GFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMGL------- 238
+ +P+ ++ +NA + SL R Q + + M P G
Sbjct: 487 MKHIREGNLVPN--------VLRWNAGVEA--SLKRPQSKDKDYTPMFPSKGSFLDIMSM 536
Query: 239 --SPDTVSYRQVISGLCKIREPVKAY--ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT 294
S D + + +S + Y +L + ++ + L D D
Sbjct: 537 VGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDM 596
Query: 295 YSSLINDYLAQGDLEKAYQLDYV---MG-----------------HDGYL---------- 324
++ ++ YL++GDL A +L + MG GY
Sbjct: 597 MNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQM 656
Query: 325 ------SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNE 378
+D T +V++ GL K+ R A L + G ++Y+TLI
Sbjct: 657 FENFCAADIATYNVIIQGLGKMGRADLASAVL--DRLTKQGGYLDIVMYNTLIN------ 708
Query: 379 FKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVH 438
+G A + H M PD YN +I +S++ ++ +AY M+
Sbjct: 709 ---ALGKATRLDEATQLFDH--MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 439 YGFVPH 444
G +P+
Sbjct: 764 AGCLPN 769
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 137/336 (40%), Gaps = 33/336 (9%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILR 80
Y+ + + C+ + + M + G + LD A I ++ +G E AL +L
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVN--LDQTMAKILLDSLIRSGKFESALGVLD 151
Query: 81 EMPERGLTADAVSYCHVICALLLPPEEKLG-----KAFEMKKDM--DDKG------ILPD 127
M E G + Y V+ AL+ E +L K E + DD G LP
Sbjct: 152 YMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPG 211
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
+V L+ L SE +F ++ F D +Y ++ + G+ A L
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
EM + + + + F P + TYN+LI+ C G+ ++AL ++ + G PD +YR
Sbjct: 272 KEMKERSSV--YGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 248 VISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGD 307
+I G CK A + EM Y + D Y+ L++ L
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQ------------YNGF---VPDTIVYNCLLDGTLKARK 374
Query: 308 LEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIART 343
+ +A QL M +G + T ++L++GL + R
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M +A + EM + G P Y CL+ + + ++A ++F +M+ G S TYN
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I F E + ++ ++G DA+++ I L L E KL A ++ ++M+
Sbjct: 400 LID-GLFRNGRAEAGFTLFCDLKKKGQFVDAITFS--IVGLQLCREGKLEGAVKLVEEME 456
Query: 121 DKGILPDSVTYEVLIDNLCWVGR 143
+G D VT L+ GR
Sbjct: 457 TRGFSVDLVTISSLLIGFHKQGR 479
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 17/313 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +AE++ EEM + P TY LI +C+ R A++V EM + +N
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 61 VIQTNAFAGTGIEVALEILRE--MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
+I AG E AL ++ + E G T V+Y ++ + L A ++ K
Sbjct: 326 IIDGLGEAGRLSE-ALGMMERFFVCESGPT--IVTYNSLVKNFCKAGD--LPGASKILKM 380
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
M +G+ P + TY + E +L+ +++ G SPD TY ++ C G
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE-AGHSPDRLTYHLILKMLCEDG 439
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ S A ++ EM ++G PD L+T LI+ C L ++EA E F G+
Sbjct: 440 KLSLAMQVNKEMKNRGIDPD--------LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
P ++++ + +GL A L M L +TY ++ D+D S+
Sbjct: 492 IPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKL-PNTYREAVDAPPDKDRRKSI 550
Query: 299 INDYLAQGDLEKA 311
++ A D+ K
Sbjct: 551 LHRAEAMSDVLKG 563
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 133/334 (39%), Gaps = 46/334 (13%)
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGG-----FSPDEHTYFNLMNCYCLQGEFSKAFHL 186
EVL+D LC G + EA ++ E + GG + P + L+N + + +A L
Sbjct: 216 EVLLDALCKEGHVREA-SMYLERI--GGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
EM P++VTY LI GYC + RVQ A+E+ M + + + +
Sbjct: 273 WEEMK--------AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQG 306
+I GL + +A + M++ C ++ T++ TY+SL+ ++ G
Sbjct: 325 PIIDGLGEAGRLSEALGM---MERFFVC-----ESGPTIV-------TYNSLVKNFCKAG 369
Query: 307 DLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMPAYII 366
DL A ++ +M G T + +K +T E L+ P +
Sbjct: 370 DLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG--MNLYFKLIEAGHSPDRLT 427
Query: 367 YDTLIEN-CSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLE 425
Y +++ C + + + +A++ + M + PD +LI R
Sbjct: 428 YHLILKMLCEDGK------------LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEM 475
Query: 426 VHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDG 459
+ +A+ + V G +P + + L G
Sbjct: 476 LEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 16/259 (6%)
Query: 13 HKGLTPHERTYTCLIHSFCQESRASKAVKVFREM-IDRGFSPSLDTYNAVIQTNAFAGTG 71
K P E Y +I+ F Q + +V R + +++ S + + +++
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGR 147
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPE--EKLGKAFEMKKDMDDKGILPDSV 129
I A+EIL MP+ G + S+ + I LL+ + +++ K F + G+ D+
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSF-NFILNLLVSAKLFDEIHKIFVSAPKL---GVEIDAC 203
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
+LI LC G L A L E + P+ T+ L+ +C +G+F +AF L
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M + PD +T+N LI G GRV+E +++ M G P+ +Y++V+
Sbjct: 263 MEKERIEPD--------TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Query: 250 SGLCKIREPVKAYELKLEM 268
GL + ++A E+ +M
Sbjct: 315 YGLLDKKRNLEAKEMMSQM 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 12/250 (4%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A E+L M G P +++ +++ + K+F G N
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I+ +G +E AL++L E P++ + +++ +I + K +AF++ + M+
Sbjct: 208 LIKGLCESGN-LEAALQLLDEFPQQKSRPNVMTFSPLIRGFC--NKGKFEEAFKLLERME 264
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ I PD++T+ +LI L GR+ E DL M +G P+ TY ++ +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC-EPNPGTYQEVLYGLLDKKRN 323
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
+A + +M+ G PS ++Y ++ G C V E + R M G P
Sbjct: 324 LEAKEMMSQMIS--------WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Query: 241 DTVSYRQVIS 250
T+ + +V+
Sbjct: 376 KTLMWWKVVQ 385
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A ++L+E + P+ T++ LI FC + + +A K+ M P T+N +I
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G +E +++L M +G + +Y V+ LL +++ +A EM M G
Sbjct: 281 GLRKKGR-VEEGIDLLERMKVKGCEPNPGTYQEVLYGLL--DKKRNLEAKEMMSQMISWG 337
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNC 173
+ P ++Y+ ++ LC + E + R+M++ GF P ++ ++ C
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNH-GFVPKTLMWWKVVQC 386
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
++ +A E+ M D G P S ++ +++ L E +F + G D
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSA-PKLGVEIDACCL 205
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
L+ C G A L E + P+ +T FSP LI G+C+ G+ +EA
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMT-FSP-------LIRGFCNKGKFEEAF 257
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
++ M + + PDT+++ +ISGL K + +L LE K + C N TY+ ++
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL-LERMKVKGC-EPNPGTYQEVLY 315
Query: 288 QLSDE 292
L D+
Sbjct: 316 GLLDK 320
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 12/238 (5%)
Query: 11 MYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT 70
M KGL P TY LI +C++ KA K+ +M + +P + TY VI G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 71 GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVT 130
+ A E+L+EM E G D +Y I + +LG A ++ +M KG+ P++ T
Sbjct: 297 P-DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIA--RRLGDADKLVDEMVKKGLSPNATT 353
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM 190
Y + L L +++L+ ML P+ + L+ + + A L +M
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECL-PNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Query: 191 VHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
V V GF + + L+ C L +V+EA + M E G P VS++++
Sbjct: 413 V--------VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 159 GFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYC 218
G PD TY +L++ YC E KA+ L +M + PD ++TY +I G
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD--------VITYTTVIGGLG 292
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLN 278
+G+ +A E+ + M E G PD +Y I C R A +L EM KK LS N
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK--GLSPN 350
Query: 279 EDTYETLMEQLS 290
TY LS
Sbjct: 351 ATTYNLFFRVLS 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 50/268 (18%)
Query: 32 QESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADA 91
+ES +S + + +++IDR ++ IQT F +R + D
Sbjct: 59 KESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYA-----SAIRGFYHSSFSLDT 113
Query: 92 VSYCHVICALLLPPEEKLGKAFEM--KKDMDDKGILPDSVTYEVL--IDNLCWVGRLSEA 147
+ Y +L K + +E+ + D+ ++ VL + LC V + E+
Sbjct: 114 MLY-------ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVES 166
Query: 148 FDLFREMLHRGGFSPD--EHTYFN-LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVT--- 201
F F+ ++ PD + FN L+ C + + A +++H + H+ F PD T
Sbjct: 167 FWKFKRLV------PDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNI 219
Query: 202 ---------------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
G P +VTYN+LI YC +++A ++ M E +P
Sbjct: 220 LLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 279
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEM 268
D ++Y VI GL I +P KA E+ EM
Sbjct: 280 DVITYTTVIGGLGLIGQPDKAREVLKEM 307
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 195/491 (39%), Gaps = 79/491 (16%)
Query: 42 VFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV-ALEILREMPERGLTADAVSYCHVIC- 99
++ EMI +G P TY +I + ++ G++V AL L +M + G+ D V+ V+
Sbjct: 209 LWDEMIRKGIKPINSTYGTLI--DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQM 266
Query: 100 ---ALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH 156
A E+ K + ++ D + S TY +ID G++ EA + F+ ML
Sbjct: 267 YKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLE 326
Query: 157 RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM-VHKGFLPDFVTGFSPSLVTYNALIY 215
G P T+ +++ Y G+ + L M +H +P TYN LI
Sbjct: 327 E-GIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH----------CAPDTRTYNILIS 375
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE-LKLEMDKKRSC 274
+ ++ A F+ M + GL PD VSYR ++ IR V+ E L EMD
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF-SIRHMVEEAEGLIAEMDDDN-- 432
Query: 275 LSLNEDTYETLMEQLSD----EDTYSSLINDYLAQGDLEKAYQLDY-VMGHDGYLSDNVT 329
+ ++E T L + E ++S ++A + Y + G GYLS+
Sbjct: 433 VEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAER 492
Query: 330 LSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP-----------AYIIYDTLIENCSNNE 378
+ + +NK RT + + V + +G+ + + Y + C+ N
Sbjct: 493 VFICCQEVNK--RTV-----IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 379 FKRLVGPA----------------------------ITFSVKV-----AIKAHHTMLHGN 405
+++ A I+ VK+ A + + M+ N
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 406 YKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMS 465
+PD VY +LI + + V +A + M G + +LIK G +E
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 466 WVIHNTLRSCN 476
+ L+SCN
Sbjct: 666 AIYRKLLQSCN 676
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 18/268 (6%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
LE+M G Y +I SF + + + A +V++EM++ P + Y +I NAF
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI--NAF 620
Query: 68 AGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM---DDKG 123
A TG ++ A+ + M E G+ ++V Y +I L L +A + + + +K
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI--KLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
PD T +I+ + +A +F M RG +E T+ ++ Y G F +A
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG--EANEFTFAMMLCMYKKNGRFEEA 736
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ +M L D P ++YN+++ + GR +EA+E F+ M G+ PD
Sbjct: 737 TQIAKQMREMKILTD------P--LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDS 788
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKK 271
+++ + + L K+ KA E+ KK
Sbjct: 789 TFKSLGTILMKLGMSKKAVRKIEEIRKK 816
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 31/327 (9%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREM 82
Y +I ++ KA ++F M+ G +P TYN ++Q A A + L +M
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC-YLEKM 566
Query: 83 PERGLTADAVSYCHVICALLLPPEEKLGK---AFEMKKDMDDKGILPDSVTYEVLIDNLC 139
E G +D + YC VI + + KLG+ A E+ K+M + I PD V Y VLI+
Sbjct: 567 RETGYVSDCIPYCAVISSFV-----KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
G + +A + E + G + Y +L+ Y G +A E +++ L
Sbjct: 622 DTGNVQQAMS-YVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA-----EAIYRKLLQSC 675
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
P + T N +I Y V++A IF M + G + ++ ++ K
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFE 734
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMG 319
+A ++ +M + M+ L+D +Y+S++ + G ++A + M
Sbjct: 735 EATQIAKQMRE---------------MKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Query: 320 HDGYLSDNVTLSVLLNGLNKIARTTEA 346
G D+ T L L K+ + +A
Sbjct: 780 SSGIQPDDSTFKSLGTILMKLGMSKKA 806
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 159/406 (39%), Gaps = 73/406 (17%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY +I ++ + + +A + F+ M++ G P+ T+N +I G EV +++
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVT-SLMKT 358
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWV 141
M + D +Y +I L + +A K+M D G+ PD V+Y L+
Sbjct: 359 M-KLHCAPDTRTYNILIS--LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 142 GRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYC----LQGEFS--KAFHLHHEMV---- 191
+ EA L EM DE+T L Y L+ +S K FH+ M
Sbjct: 416 HMVEEAEGLIAEM-DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGY 474
Query: 192 --------HKGFLPDFVTGF-------SPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+G+L + F +++ YN +I Y ++A E+F M
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSC---------------------L 275
G++PD +Y ++ L P K + ++K R L
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKG---RCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 276 SLNEDTYETLMEQLSDED--TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
++ E+ Y+ ++E + D Y LIN + G++++A M G ++V + L
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 334 LNGLNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEF 379
+ K+ EA+ IY L+++C+ ++
Sbjct: 652 IKLYTKVGYLDEAE-----------------AIYRKLLQSCNKTQY 680
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 98/248 (39%), Gaps = 57/248 (22%)
Query: 109 LGKAFEMK------KDMDDKGILPDSVTYEVLID----------NLCWVGRLSEAFDLFR 152
LGKA + + +M KGI P + TY LID LCW+G++S+
Sbjct: 197 LGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI----- 251
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
G PDE T ++ Y EF KA + D + S TYN
Sbjct: 252 ------GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKAD--SHVCLSSYTYNT 303
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI------SGLCKIREPVKAYELKL 266
+I Y G+++EA E F+ M E G+ P TV++ +I L ++ +K +L
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC 363
Query: 267 EMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSD 326
D + TY+ LI+ + D+E+A M DG D
Sbjct: 364 APDTR----------------------TYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Query: 327 NVTLSVLL 334
V+ LL
Sbjct: 402 PVSYRTLL 409
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 148/372 (39%), Gaps = 48/372 (12%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFRE------MIDRGFSPSLD 56
EAE ++ EM + E T + L + + K+ F+ M G+S ++D
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 57 TYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
Y + V + +E+ +R + + Y +I A + + KA E+
Sbjct: 480 AYGE----RGYLSEAERVFI-CCQEVNKRTV----IEYNVMIKAYGIS--KSCEKACELF 528
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
+ M G+ PD TY L+ L + + E + G+ D Y +++ +
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILA-SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
G+ + A ++ EMV PD +V Y LI + G VQ+A+ M E
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPD--------VVVYGVLINAFADTGNVQQAMSYVEAMKEA 639
Query: 237 GLSPDTV--------------------SYRQVISGLCKIREP-VKAYELKLEMDKKRSCL 275
G+ ++V YR+++ K + P V + + +RS +
Sbjct: 640 GIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMV 699
Query: 276 SLNEDTYETLMEQ-LSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL 334
E ++++ ++ ++E T++ ++ Y G E+A Q+ M L+D ++ + +L
Sbjct: 700 RKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 335 NGLNKIARTTEA 346
R EA
Sbjct: 760 GLFALDGRFKEA 771
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 18/296 (6%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAV----KVFREMIDRGFSPSLDTYN 59
A +V +EM ++G P +Y L+ FC E + +A +F + +G + Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ AG ++ A+EIL ++ +GL A Y H+ E + + + +
Sbjct: 231 ILLDALCDAGE-VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTET 289
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+G +P +Y + +L G+L E ++ M + GF P Y + C G+
Sbjct: 290 LIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK-GFEPTPFIYGAKVKALCRAGK 348
Query: 180 FSKAFH-LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMG 237
+A ++ EM+ L P++ YN LI G C G+ EA+ + M ++
Sbjct: 349 LKEAVSVINKEMMQGHCL--------PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED 293
+ +Y+ ++ GLC+ + ++A ++ EM K + +TY +++ L D D
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGV--ETYHMMIKGLCDMD 454
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRAS--KAVKVFREMIDRGFSPSLDTYNA 60
+A E+L ++ KGL +R Y + + S + ++ E + RG P LD+Y+A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE-MKKDM 119
+ T+ F + E+L M +G Y + AL KL +A + K+M
Sbjct: 304 -MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG--KLKEAVSVINKEM 360
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
LP Y VLI LC G+ EA ++M + +E TY L++ C G+
Sbjct: 361 MQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F +A + EM+ K P + TY+ +I G C + R EA+ M +
Sbjct: 421 FLEASQVMEEMLIKSHF--------PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 240 PDTVSYRQVISGLC 253
P++ ++ + +C
Sbjct: 473 PESSVWKALAESVC 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 119/299 (39%), Gaps = 64/299 (21%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
L+ CQ +R+ A +VF+EM +G P D+Y +++ G +E A +L M R
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK-LEEATHLLYSMFWR 216
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
+ KG D V Y +L+D LC G +
Sbjct: 217 ---------------------------------ISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE-FSKAFHLHHEMVHKGFLPDFVT--- 201
+A ++ ++L +G +P + + E + L E + +G +P +
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 202 ------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIF-RGMPEM 236
GF P+ Y A + C G+++EA+ + + M +
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY 295
P Y +I GLC + ++A +M K+ SC++ NE+TY+TL++ L + +
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA-NEETYQTLVDGLCRDGQF 421
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 39/199 (19%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVF-REMIDRGFSPSLDTYN 59
+ E EEVL M KG P Y + + C+ + +AV V +EM+ P++ YN
Sbjct: 314 LVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I+ + + G + +AV Y +KK
Sbjct: 374 VLIKG-----------------LCDDGKSMEAVGY--------------------LKKMS 396
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ + TY+ L+D LC G+ EA + EML + F P TY ++ C
Sbjct: 397 KQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF-PGVETYHMMIKGLCDMDR 455
Query: 180 FSKAFHLHHEMVHKGFLPD 198
+A EMV + +P+
Sbjct: 456 RYEAVMWLEEMVSQDMVPE 474
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 18/296 (6%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAV----KVFREMIDRGFSPSLDTYN 59
A +V +EM ++G P +Y L+ FC E + +A +F + +G + Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
++ AG ++ A+EIL ++ +GL A Y H+ E + + + +
Sbjct: 231 ILLDALCDAGE-VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTET 289
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+G +P +Y + +L G+L E ++ M + GF P Y + C G+
Sbjct: 290 LIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK-GFEPTPFIYGAKVKALCRAGK 348
Query: 180 FSKAFH-LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM-PEMG 237
+A ++ EM+ L P++ YN LI G C G+ EA+ + M ++
Sbjct: 349 LKEAVSVINKEMMQGHCL--------PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED 293
+ +Y+ ++ GLC+ + ++A ++ EM K + +TY +++ L D D
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGV--ETYHMMIKGLCDMD 454
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRAS--KAVKVFREMIDRGFSPSLDTYNA 60
+A E+L ++ KGL +R Y + + S + ++ E + RG P LD+Y+A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE-MKKDM 119
+ T+ F + E+L M +G Y + AL KL +A + K+M
Sbjct: 304 -MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG--KLKEAVSVINKEM 360
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
LP Y VLI LC G+ EA ++M + +E TY L++ C G+
Sbjct: 361 MQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
F +A + EM+ K P + TY+ +I G C + R EA+ M +
Sbjct: 421 FLEASQVMEEMLIKSHF--------PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 240 PDTVSYRQVISGLC 253
P++ ++ + +C
Sbjct: 473 PESSVWKALAESVC 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 119/299 (39%), Gaps = 64/299 (21%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILREMPER 85
L+ CQ +R+ A +VF+EM +G P D+Y +++ G +E A +L M R
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK-LEEATHLLYSMFWR 216
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
+ KG D V Y +L+D LC G +
Sbjct: 217 ---------------------------------ISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE-FSKAFHLHHEMVHKGFLPDFVT--- 201
+A ++ ++L +G +P + + E + L E + +G +P +
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 202 ------------------------GFSPSLVTYNALIYGYCSLGRVQEALEIF-RGMPEM 236
GF P+ Y A + C G+++EA+ + + M +
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY 295
P Y +I GLC + ++A +M K+ SC++ NE+TY+TL++ L + +
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA-NEETYQTLVDGLCRDGQF 421
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 39/199 (19%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVF-REMIDRGFSPSLDTYN 59
+ E EEVL M KG P Y + + C+ + +AV V +EM+ P++ YN
Sbjct: 314 LVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I+ + + G + +AV Y +KK
Sbjct: 374 VLIKG-----------------LCDDGKSMEAVGY--------------------LKKMS 396
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ + TY+ L+D LC G+ EA + EML + F P TY ++ C
Sbjct: 397 KQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF-PGVETYHMMIKGLCDMDR 455
Query: 180 FSKAFHLHHEMVHKGFLPD 198
+A EMV + +P+
Sbjct: 456 RYEAVMWLEEMVSQDMVPE 474
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 39/266 (14%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+T E EM +G P+ TY I FC++ +A+++F +M F ++
Sbjct: 226 VTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT 285
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I + A I+ A ++ E+ +RGLT D +Y ++ +L+ + + A ++ K+M+
Sbjct: 286 LIHGSGVARNKIK-ARQLFDEISKRGLTPDCGAYNALMSSLMKCGD--VSGAIKVMKEME 342
Query: 121 DKGILPDSVTYEVLIDNLCWVGRL-SEAF------DLFREMLHRGGFSPDEHTYFNLMNC 173
+KGI PDSVT+ + ++G + S+ F + +++M R P T LM
Sbjct: 343 EKGIEPDSVTFHSM-----FIGMMKSKEFGFNGVCEYYQKMKER-SLVPKTPTIVMLMKL 396
Query: 174 YCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGM 233
+C GE + L M+ KG+ P G + L+T C+ R +A E
Sbjct: 397 FCHNGEVNLGLDLWKYMLEKGYCPH---GHALELLT-----TALCARRRANDAFE----- 443
Query: 234 PEMGLSPDTVSYRQVISGLCKIREPV 259
S++ V G C + EPV
Sbjct: 444 ---------CSWQTVERGRC-VSEPV 459
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 19/296 (6%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA + E++ H P +T L+ F + + + EM+ RGF P+ TY
Sbjct: 192 MKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYG- 249
Query: 61 VIQTNAFAGT-GIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
I+ + F AL + +M +I + + KA ++ ++
Sbjct: 250 -IRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI--KARQLFDEI 306
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+G+ PD Y L+ +L G +S A + +EM + G PD T+ ++ E
Sbjct: 307 SKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK-GIEPDSVTFHSMFIGMMKSKE 365
Query: 180 --FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
F+ + +M + +P +P++V L +C G V L++++ M E G
Sbjct: 366 FGFNGVCEYYQKMKERSLVPK-----TPTIVMLMKL---FCHNGEVNLGLDLWKYMLEKG 417
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDED 293
P + + + LC R A+E + ++ C+S E Y L LS +
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVS--EPVYRMLETSLSSNN 471
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 137/371 (36%), Gaps = 68/371 (18%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
+E++ K E + L+ +FC E +A +F ++ R F+P + T N ++ A
Sbjct: 167 KEIFRKKFGVDE--FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEA 223
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G +TA + Y +M +G P+S
Sbjct: 224 GD----------------VTATELFY----------------------HEMVKRGFKPNS 245
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
VTY + ID C EA LF +M R F L++ + KA L
Sbjct: 246 VTYGIRIDGFCKKRNFGEALRLFEDM-DRLDFDITVQILTTLIHGSGVARNKIKARQLFD 304
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
E+ +G PD YNAL+ G V A+++ + M E G+ PD+V++ +
Sbjct: 305 EISKRGLTPD--------CGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL 308
G+ K +E + E +K SL T +M L+ + G++
Sbjct: 357 FIGMMKSKE--FGFNGVCEYYQKMKERSLVPKTPTIVM-----------LMKLFCHNGEV 403
Query: 309 EKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF--FRCFGMPAYII 366
L M GY L +L L R +A + W RC P Y +
Sbjct: 404 NLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDA-FECSWQTVERGRCVSEPVYRM 462
Query: 367 YDTLIENCSNN 377
+T + SNN
Sbjct: 463 LETSLS--SNN 471
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 39/241 (16%)
Query: 126 PDSVTYEVLIDNLCWVGRLS------EAFDLFREMLHRGGFSPDEHTYFN-LMNCYCLQG 178
P+ ++++ + LC + + EAF + + R F DE FN L+ +C +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE---FNILLRAFCTER 190
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
E +A + E +H F PD + T N L+ G+ G V + M + G
Sbjct: 191 EMKEARSIF-EKLHSRFNPD--------VKTMNILLLGFKEAGDVTATELFYHEMVKRGF 241
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDK--------------KRSCLSLNEDTYET 284
P++V+Y I G CK R +A L +MD+ S ++ N+
Sbjct: 242 KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQ 301
Query: 285 LMEQLS------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
L +++S D Y++L++ + GD+ A ++ M G D+VT + G+
Sbjct: 302 LFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMM 361
Query: 339 K 339
K
Sbjct: 362 K 362
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 31/255 (12%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
++T +I F Q +AV +F EM +G P+ TY +VI T + EV ++++
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY-SVILTALPVISPSEVHAQVVKT 422
Query: 82 MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK---DMDDKGILPDSVTYEVLIDNL 138
ER T + LL KLGK E K +DDK D V + ++
Sbjct: 423 NYERSST---------VGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGY 469
Query: 139 CWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN-CYCLQGEFSKAFHLHHEMVHKGFLP 197
G A +F E L +GG P+E T+ +++N C + H GF
Sbjct: 470 AQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH------GFA- 521
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
+ SL +AL+ Y G ++ A E+F+ E D VS+ +ISG + +
Sbjct: 522 -IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE----KDLVSWNSMISGYAQHGQ 576
Query: 258 PVKAYELKLEMDKKR 272
+KA ++ EM K++
Sbjct: 577 AMKALDVFKEMKKRK 591
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 165/399 (41%), Gaps = 56/399 (14%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
+ +V M + L+ ++ ++ S+ + A+ + EM G P + T+N+++
Sbjct: 143 SRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS 198
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
A G + A+ +L+ M GL S ++ A+ P KLGKA
Sbjct: 199 GYASKGLSKD-AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY------- 250
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
IL + + Y+V ++ +M + G+ P F++M+ + S
Sbjct: 251 ILRNQLWYDVYVETT------------LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLV 298
Query: 184 FHLHHEMVHKGFLPDFVT----GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
L + + K + G P +T+N+L GY +LG+ ++AL++ M E G++
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 240 PDTVSYRQVISGLCK---IREPVKAYELKLEMD-------------KKRSCLSLNEDTYE 283
P+ VS+ + SG K R +K + +K++ + K CLSL E
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVF-IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 284 T----LMEQL-SDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
L + L D ++L++ Y GDL+ A ++ + + + S N +L G
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN----CMLMGYA 473
Query: 339 KIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNN 377
R E ++V P I + +++ C N+
Sbjct: 474 MFGRGEEG--IAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 38/338 (11%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
EM +G+ P+E TYT ++ S+ ++ +A+K F EM GF P TY++VI + AG
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLP---PEEKLGKAFEMKKDMDDKGILP 126
E A+ + +M +G+ + CA +L E KA + DM+ I
Sbjct: 343 DW-EKAIGLYEDMRSQGIVPS-----NYTCATMLSLYYKTENYPKALSLFADMERNKIPA 396
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
D V ++I +G +A +F E R DE TY + + G KA +
Sbjct: 397 DEVIRGLIIRIYGKLGLFHDAQSMFEET-ERLNLLADEKTYLAMSQVHLNSGNVVKALDV 455
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
EM+ +P S Y ++ Y + V A E FR + + GL PD S
Sbjct: 456 -IEMMKTRDIP-------LSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCN 506
Query: 247 QVISGLCKIR--EPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLA 304
+++ ++ E K + ++ +D+ + + + Y+T M Y
Sbjct: 507 DMLNLYTRLNLGEKAKGFIKQIMVDQ----VHFDIELYKTAMRV-------------YCK 549
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIAR 342
+G + +A L MG + + DN + L ++ + +
Sbjct: 550 EGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNK 587
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+++AE + + + GL E T LI + ++ + +A +++ +P +
Sbjct: 651 VSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA-GESKTPGKSVIRS 709
Query: 61 VIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I +A+ G +E A + E E+G AV+ ++ AL K +A + +
Sbjct: 710 MI--DAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNAL--TNRGKHREAEHISRTC 765
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+K I D+V Y LI + G+L A +++ E +H G TY +++ Y +
Sbjct: 766 LEKNIELDTVGYNTLIKAMLEAGKLQCASEIY-ERMHTSGVPCSIQTYNTMISVYGRGLQ 824
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
KA + G D Y +I Y G++ EAL +F M + G+
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKI--------YTNMIMHYGKGGKMSEALSLFSEMQKKGIK 876
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
P T SY ++ R + EL M++ C L+ TY TL++ ++ ++
Sbjct: 877 PGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLS--TYLTLIQVYAESSQFA 931
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 129/295 (43%), Gaps = 29/295 (9%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P YT ++ + Q + A + F EM++ G P ++ T A G L
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH-SAMLT 244
Query: 78 ILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
+ + ER + Y ++ +L + GK ++ +M ++G+ P+ TY +++ +
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSL--QKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
G EA F EM GF P+E TY ++++ G++ KA L+ +M +G +
Sbjct: 303 YAKQGFKEEALKAFGEM-KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV- 360
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
PS T ++ Y +AL +F M + D +VI GL
Sbjct: 361 -------PSNYTCATMLSLYYKTENYPKALSLFADMERNKIPAD-----EVIRGLI---- 404
Query: 258 PVKAY-ELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKA 311
++ Y +L L D + S+ E+T + L+DE TY ++ +L G++ KA
Sbjct: 405 -IRIYGKLGLFHDAQ----SMFEETER--LNLLADEKTYLAMSQVHLNSGNVVKA 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +A E+ GL E+ YT +I + + + S+A+ +F EM +G P +YN
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+++ A + EV E+L+ M G D +Y +I + + +A + +
Sbjct: 885 MVKICATSRLHHEVD-ELLQAMERNGRCTDLSTYLTLI--QVYAESSQFAEAEKTITLVK 941
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+KGI + L+ L G + EA + +M G SPD ++ Y G+
Sbjct: 942 EKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM-SEAGISPDSACKRTILKGYMTCGDA 1000
Query: 181 SKAFHLHHEMVHKGFLPD-FVTGFSPSL 207
K + +M+ D FV+ L
Sbjct: 1001 EKGILFYEKMIRSSVEDDRFVSSVVEDL 1028
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EAE V EM + G+ +Y+ +I + + +K +K+F M P YNAV+
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 63 QTNAFAGTGIEVALEILREM-PERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
A A + + A +++ M E+G+ + V+Y +I L K +A ++ +M +
Sbjct: 345 HALAKA-SFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC--KARKTEEAKQVFDEMLE 401
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
KG+ P TY + + G E F+L +M + G P TY L+ C +F
Sbjct: 402 KGLFPTIRTYHAFM-RILRTG--EEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
L EM K PD L +Y +I+G G+++EA ++ M + G+ P+
Sbjct: 458 NVLLLWDEMKEKTVGPD--------LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 1 MTEAEEVLEEMYH-KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYN 59
++EA +++ M KG+ P+ TY LI C+ + +A +VF EM+++G P++ TY+
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
A ++ TG EV E+L +M + G +Y +I L + + +M
Sbjct: 413 AFMR---ILRTGEEV-FELLAKMRKMGCEPTVETYIMLIRKLCRWRD--FDNVLLLWDEM 466
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHT 166
+K + PD +Y V+I L G++ EA+ ++EM + G P+E+
Sbjct: 467 KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK-GMRPNENV 512
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 28/238 (11%)
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
A + EM G+ D VSY +I L K ++ M + I PD Y +
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCY--SKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
+ L +SEA +L + M G P+ TY +L+ C + +A + EM+ KG
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
P++ TY+A + L +E E+ M +MG P +Y +I LC+
Sbjct: 404 LF--------PTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCR 452
Query: 255 IREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAY 312
R+ L EM +K T+ LS +Y +I+ G +E+AY
Sbjct: 453 WRDFDNVLLLWDEMKEK------------TVGPDLS---SYIVMIHGLFLNGKIEEAY 495
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 21/260 (8%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++ E ++E + E Y+ LI S+ Q S + A++ F +M G S ++NA+
Sbjct: 84 SDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNAL 143
Query: 62 IQTNAFAGTGIEVALEILREMPER--GLTADAVSYCHVI---CALLLPPEEKLGKAFEMK 116
+ + ++ E+P+R + D +SY +I C P KA E+
Sbjct: 144 LNA-CLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE-----KAIEIM 197
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
+ M KG+ ++ + ++ +L G L A +L+ EM+ +G ++ +N+
Sbjct: 198 RQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKG--CELDNAAYNVRIMSAQ 255
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+ + L EM G PD ++YN L+ YC G + EA +++ G+
Sbjct: 256 KESPERVKELIEEMSSMGLKPD--------TISYNYLMTAYCERGMLDEAKKVYEGLEGN 307
Query: 237 GLSPDTVSYRQVISGLCKIR 256
+P+ ++R +I LC R
Sbjct: 308 NCAPNAATFRTLIFHLCYSR 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 131 YEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE-FSKAFHLHHE 189
Y LI + + A F +M G +P FN + CL + F K L E
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYG--TPRSAVSFNALLNACLHSKNFDKVPQLFDE 162
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
+P P ++Y LI YC G ++A+EI R M G+ T+++ ++
Sbjct: 163 ------IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTIL 216
Query: 250 SGLCKIREPVKAYELKLEMDKK-------------RSCLSLNEDTYETLMEQLS------ 290
S L K E A L EM KK S + + + L+E++S
Sbjct: 217 SSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKP 276
Query: 291 DEDTYSSLINDYLAQGDLEKAYQL 314
D +Y+ L+ Y +G L++A ++
Sbjct: 277 DTISYNYLMTAYCERGMLDEAKKV 300
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+LE++ + L ++ Y C++ RA K F ++I +P++ T+N ++ A
Sbjct: 422 LLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI---LNPTMSTFNMLMSVCA 478
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVI--CALLLPPEEKLGKAFEMKKDMDDKGI 124
+ IE A +LR + E G+TAD Y +I CA K+ FE+ M + G+
Sbjct: 479 -SSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA----KSGKVDAMFEVFHQMSNSGV 533
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
+ T+ LID G++++AF + +L PD + L++ G +AF
Sbjct: 534 EANLHTFGALIDGCARAGQVAKAFGAY-GILRSKNVKPDRVVFNALISACGQSGAVDRAF 592
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIF--------RGMPEM 236
+ EM + D P ++ AL+ C+ G+V+ A E++ RG PE+
Sbjct: 593 DVLAEMKAETHPID------PDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A VL + G+T + YT LI S + + +VF +M + G +L T+ A+I
Sbjct: 486 ARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALID 545
Query: 64 TNAFAGTGIEV--ALEILRE---MPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
A AG + A ILR P+R + +S C A + +AF++ +
Sbjct: 546 GCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA--------VDRAFDVLAE 597
Query: 119 M--DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
M + I PD ++ L+ C G++ A +++ +M+H+ G Y +N
Sbjct: 598 MKAETHPIDPDHISIGALMKACCNAGQVERAKEVY-QMIHKYGIRGTPEVYTIAVNSCSK 656
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
G++ A ++ +M K PD V F +L+ + G+ + + EA I +
Sbjct: 657 SGDWDFACSIYKDMKEKDVTPDEV--FFSALID----VAGHAKM--LDEAFGILQDAKSQ 708
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYEL--KLEMDKKRSCLS 276
G+ T+SY ++ C ++ KA EL K++ K R +S
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIS 750
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
EV +M + G+ + T+ LI + + +KA + + + P +NA+I
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 66 AFAGTGIEVALEILREMPERG--LTADAVSYCHVICA---------------------LL 102
+G ++ A ++L EM + D +S ++ A +
Sbjct: 583 GQSG-AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 103 LPPE---------EKLGK---AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDL 150
PE K G A + KDM +K + PD V + LID L EAF +
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 151 FREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTY 210
++ +G +Y +LM C ++ KA L+ ++ P++ T
Sbjct: 702 LQDAKSQG-IRLGTISYSSLMGACCNAKDWKKALELYEKIKS--------IKLRPTISTM 752
Query: 211 NALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
NALI C ++ +A+E + +GL P+T++Y
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITY 787
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 26 LIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ-----TNAFAGTGI-EVALEIL 79
LI + + A++++ +++D G P+ +Y V+ +A + GI + +L
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 80 REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLC 139
+M ++GL + V+ A E A ++ K M D G P ++Y L+ L
Sbjct: 447 NKMEDKGLKPQRRHWNAVLVACSKASETT--AAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
EAF ++ M+ + G P+ + Y + + Q +F+ L EM KG
Sbjct: 505 KGKLYDEAFRVWNHMI-KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI---- 559
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
PS+VT+NA+I G G A E F M + P+ ++Y +I L +P
Sbjct: 560 ----EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPR 615
Query: 260 KAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
AYEL ++ + L L+ Y+ +++ +TY + I+
Sbjct: 616 LAYELHVKA--QNEGLKLSSKPYDAVVKS---AETYGATID 651
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+L +M KGL P R + ++ + + S + A+++F+ M+D G P++ +Y A++
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSA-L 503
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
G + A + M + G+ + Y + A +L ++K + K+M KGI P
Sbjct: 504 EKGKLYDEAFRVWNHMIKVGIEPNL--YAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
VT+ +I G A++ F M P+E TY L+ + A+ L
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEWFHRMKSE-NVEPNEITYEMLIEALANDAKPRLAYEL 620
Query: 187 HHEMVHKGF 195
H + ++G
Sbjct: 621 HVKAQNEGL 629
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/466 (19%), Positives = 178/466 (38%), Gaps = 65/466 (13%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EAE++L++M +G+ P+ TY L+ + +E KA+ + ++GF P+ TY+ +
Sbjct: 202 EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261
Query: 63 QTNAFAGTGIEVALEI---LREMPERGLTADAVSY----------------CH-VICALL 102
G+ ALE LRE + + V Y C+ V+ L
Sbjct: 262 LVYRRMEDGMG-ALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWL 320
Query: 103 LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP 162
+ + + ++ MD G+ P +E LI W E + + +E+ R
Sbjct: 321 VKDDNWTTRVLKLLNAMDSAGVRPSREEHERLI----WACTREEHYIVGKELYKRIRERF 376
Query: 163 DEHTYFNLMNCYCLQGEFSK---AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCS 219
E + + L G+ K A ++ +++ +G P+ ++ + + +N L+
Sbjct: 377 SEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLS-YELVVSHFNILLSAASK 435
Query: 220 LGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL-KLEMDKKRSCLSLN 278
G + + + M + GL P + V+ K E A ++ K +D +
Sbjct: 436 RGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVI- 494
Query: 279 EDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLN 338
+Y L+ L Y + + +G + L T++ +L G
Sbjct: 495 --SYGALLSALEKGKLYDEAF----------RVWNHMIKVGIEPNLYAYTTMASVLTG-- 540
Query: 339 KIARTTEAKWYLLWTVFFRCFGM---PAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAI 395
+ K+ LL T+ P+ + ++ +I C+ N VA
Sbjct: 541 ------QQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS-----------GVAY 583
Query: 396 KAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGF 441
+ H M N +P+ Y +LI + + AY ++++ + G
Sbjct: 584 EWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 39/274 (14%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDR-GFSPSLDTYNAV 61
E+ E+L EM ++P T L+ S C + + K E + PSL NA+
Sbjct: 219 ESIELLVEMERNLVSPTSVTLL-LVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 62 IQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ NA+A G +++A+ I R M R D +S+ ++ + KL + +
Sbjct: 278 V--NAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYF------ 325
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN-CYCLQ-- 177
D+ + D +++ ++ID G +E+ ++FREM G PDE T +++ C L
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM-QSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 178 --GEFSKAF----HLHHEMVHKGFLPD--FVTGFSPSL------------VTYNALIYGY 217
GE+ K + + +++V L D F G S T+ A++ G
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 218 CSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
+ G+ QEA+++F M +M + PD ++Y V+S
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFR--EMIDRGFSPSLDTYNAVIQT 64
V E+M G+ +I FC+E +A +A V+ + ++ P + A + T
Sbjct: 288 VCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPR---FVATLIT 344
Query: 65 NAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
G I A E+L ++ + VI +L K KA + DM KG
Sbjct: 345 ALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLL--DMISKG 402
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
P + + +++ G L EA ++ + M RG PD +TY +++ Y G +A
Sbjct: 403 PAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG-LKPDVYTYTVIISGYAKGGMMDEA 461
Query: 184 FHLHHEMV--HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPD 241
+ E HK P VTY+ALI GYC + EAL++ M G+ P+
Sbjct: 462 QEILAEAKKKHKKLSP----------VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN 511
Query: 242 TVSYRQVISGLC-KIREPVKAYELKLEMDKK 271
Y ++I C K + KA L EM +K
Sbjct: 512 ADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 27/280 (9%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG--- 71
G TP+ +TY + + C+ S A V +M+ G + +I G
Sbjct: 261 GFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA 320
Query: 72 ---IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
E+A + +P R + + C + +E LG ++ + +GI P
Sbjct: 321 YSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA-QEMLG---DLSGEARRRGIKP-- 374
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ-GEFSKAFHLH 187
+ +I +LC + + +A L +M+ +G +P + FNL+ C + G+ +A +
Sbjct: 375 --FSDVIHSLCRMRNVKDAKALLLDMISKGP-APG-NAVFNLVVHACSKTGDLDEAKEVL 430
Query: 188 HEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQ 247
M +G PD + TY +I GY G + EA EI + V+Y
Sbjct: 431 KLMESRGLKPD--------VYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHA 482
Query: 248 VISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLME 287
+I G CKI E +A +L EMD R + N D Y L++
Sbjct: 483 LIRGYCKIEEYDEALKLLNEMD--RFGVQPNADEYNKLIQ 520
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 1 MTEAEEVLEEMY--HKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTY 58
M EA+E+L E HK L+P TY LI +C+ +A+K+ EM G P+ D Y
Sbjct: 458 MDEAQEILAEAKKKHKKLSPV--TYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEY 515
Query: 59 NAVIQTNAFAGTGIEVALEILREMPERGLTADAVS 93
N +IQ+ E A + EM ++GL +A+S
Sbjct: 516 NKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 19/289 (6%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
EE+LEE E +I + + A KVF EM +R S+ ++NA++
Sbjct: 94 EEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSA 153
Query: 65 NAFAGTGIEVALEILREMPER-GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ +V E+ E+P + + D VSY +I AL ++ L +A + ++++KG
Sbjct: 154 YRLS-KKFDVVEELFNELPGKLSIKPDIVSYNTLIKALC--EKDSLPEAVALLDEIENKG 210
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
+ PD VT+ L+ + G+ +++ +M+ + + D TY + + + +
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK-NVAIDIRTYNARLLGLANEAKSKEL 269
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+L E+ G PD + ++NA+I G + G++ EA ++ + + G PD
Sbjct: 270 VNLFGELKASGLKPD--------VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA 321
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDE 292
++ ++ +CK + A EL E KR + +T ++QL DE
Sbjct: 322 TFALLLPAMCKAGDFESAIELFKETFSKRYLVG------QTTLQQLVDE 364
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA +L+E+ +KGL P T+ L+ S + + +++ +M+++ + + TYNA
Sbjct: 196 LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNA 255
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ A E+ + + E+ GL D S+ +I + E K+ +A K++
Sbjct: 256 RLLGLANEAKSKEL-VNLFGELKASGLKPDVFSFNAMIRGSI--NEGKMDEAEAWYKEIV 312
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR 157
G PD T+ +L+ +C G A +LF+E +
Sbjct: 313 KHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 23/256 (8%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
++ E ++E + E + LI S+ + S A+K+F EM G ++ ++NA+
Sbjct: 84 SDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNAL 143
Query: 62 IQTNAFAGTGIEVALEILREMPER--GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+ E ++ E P+R +T D +SY +I + K KA E+ +DM
Sbjct: 144 LAA-CLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYC--DSGKPEKAMEIMRDM 200
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFN--LMNCYCLQ 177
+ KG+ + + ++ +L G + EA L+ EM+++G ++T +N LMN
Sbjct: 201 EVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKG--CDLDNTVYNVRLMNAAKES 258
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
E K L EM G PD V+YN L+ YC G + EA +++ G+ +
Sbjct: 259 PERVK--ELMEEMSSVGLKPD--------TVSYNYLMTAYCVKGMMSEAKKVYEGLEQ-- 306
Query: 238 LSPDTVSYRQVISGLC 253
P+ ++R +I LC
Sbjct: 307 --PNAATFRTLIFHLC 320
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 13 HKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGI 72
+ +TP + +Y LI S+C + KA+++ R+M +G ++ + ++ + + +
Sbjct: 167 YNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGS-LYKNGLV 225
Query: 73 EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYE 132
+ A + EM +G D Y L+ +E + E+ ++M G+ PD+V+Y
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYN---VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYN 282
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE--M 190
L+ C G +SEA + ++ G P+ T+ L+ C+ G + + + + +
Sbjct: 283 YLMTAYCVKGMMSEA-----KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAI 337
Query: 191 VHKGFLPDFVT 201
VHK +PDF T
Sbjct: 338 VHK--IPDFKT 346
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 149/345 (43%), Gaps = 44/345 (12%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMID-RGFSPSLDTYNAVIQT-NAF 67
E + K + +ERT L A+K + E+++ + P++ V + N +
Sbjct: 65 EWFRKNIAVYERTVRRLA--------AAKKFEWVEEILEEQNKYPNMSKEGFVARIINLY 116
Query: 68 AGTGI-EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK-GIL 125
G+ E A ++ EMPER A+S+ ++ A + +K + K++ K I
Sbjct: 117 GRVGMFENAQKVFDEMPERNCKRTALSFNALLNACV--NSKKFDLVEGIFKELPGKLSIE 174
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
PD +Y LI LC G +EA L E+ ++G PD T+ L++ +G+F +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKG-LKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
+ MV K D + +YNA + G + +E + +F + L PD ++
Sbjct: 234 IWARMVEKNVKRD--------IRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 246 RQVISGLC---KIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
+I G K+ E + Y+ E++K C L + ++SL+
Sbjct: 286 TAMIKGFVSEGKLDEAITWYK---EIEK-NGCRPL--------------KFVFNSLLPAI 327
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
GDLE AY+L + L D L +++ L K ++ EA+
Sbjct: 328 CKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAE 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
TEA +++E+ +KGL P T+ L+H + + + +++ M+++ + +YNA
Sbjct: 194 TEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNAR 253
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
+ A E+ + + ++ L D ++ +I + E KL +A K+++
Sbjct: 254 LLGLAMENKSEEM-VSLFDKLKGNELKPDVFTFTAMIKGFV--SEGKLDEAITWYKEIEK 310
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR 157
G P + L+ +C G L A++L +E+ +
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 23/273 (8%)
Query: 5 EEVLEEMYHK----GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
++ L+ +Y++ G+ ++ Y C+I+ + + F EMI GF+P+ T+N
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV 704
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ + + + + L + +R D +SY +I A + K+M
Sbjct: 705 LL--DVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAY--GKNKDYTNMSSAIKNMQ 760
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFS---PDEHTYFNLMNCYCLQ 177
G Y L+D G+ + + FR +L R S PD +TY ++N Y Q
Sbjct: 761 FDGFSVSLEAYNTLLDAY---GK-DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQ 816
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
G + + E+ G PD L +YN LI Y G V+EA+ + + M
Sbjct: 817 GWIDEVADVLKELKESGLGPD--------LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDK 270
+ PD V+Y +++ L + E ++A + L M +
Sbjct: 869 IIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQ 901
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
+ ++N Y QG+ E+ + GFSP+++ YN LI GY + +++
Sbjct: 316 NWLVMLNAYSQQGKM--------ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEA 367
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISG 251
A +F + +GL PD SYR +I G
Sbjct: 368 AQGLFHRLCNIGLEPDETSYRSMIEG 393
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 19/241 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E EEM G TP+ T+ L+ + + K ++F + R + +YN
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNT 738
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I ++ I + M G + +Y ++ A ++++ K + K M
Sbjct: 739 IIAAYGKNKDYTNMSSAI-KNMQFDGFSVSLEAYNTLLDA--YGKDKQMEKFRSILKRMK 795
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
PD TY ++I+ G + E D+ +E L G PD +Y L+ Y + G
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE-LKESGLGPDLCSYNTLIKAYGIGGMV 854
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFR---GMPEMG 237
+A L EM + +PD VTY L+ +L R E LE + M +MG
Sbjct: 855 EEAVGLVKEMRGRNIIPD--------KVTYTNLV---TALRRNDEFLEAIKWSLWMKQMG 903
Query: 238 L 238
+
Sbjct: 904 I 904
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 31/339 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ E V++EM G TY + F + ++ VK++ M+D F PS+ +
Sbjct: 279 VAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSL 338
Query: 61 VIQ-TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+++ + +++ + R+ G + Y + +L + +A E+ K M
Sbjct: 339 LLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL--TSVGRFDEAEEITKAM 396
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
+ G PD++TY L+ LC RL EA + +M +G F PD T+ L+ +C E
Sbjct: 397 RNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF-PDIKTWTILIQGHCKNNE 455
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEA-LEIFRGMPEMGL 238
KA M+ KGF D +L+ + LI G+ + + A + + + +
Sbjct: 456 LDKALACFANMLEKGFDID------SNLL--DVLIDGFVIHNKFEGASIFLMEMVKNANV 507
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNE--DTY----------ETLM 286
P +Y+ +I L KI++ +A +L L+M KK++ + E D Y + +
Sbjct: 508 KPWQSTYKLLIDKLLKIKKSEEALDL-LQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFL 566
Query: 287 EQLSDEDT-----YSSLINDYLAQGDLEKAYQLDYVMGH 320
+ LS +D+ Y +I + +G L A L ++ H
Sbjct: 567 DVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPH 605
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 135/384 (35%), Gaps = 77/384 (20%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV------------- 61
GL+P Y+ ++ Q+ + REM GF DTY +
Sbjct: 118 GLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADA 177
Query: 62 ----------IQTNAFAGTGIEVAL---------EILREMPERGLTADAVSYCHVICALL 102
++ NA + EV+ E+ RE+ E L V+ L
Sbjct: 178 VAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELR 237
Query: 103 LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP 162
P + L + G +VTY + L ++E + + EM G+
Sbjct: 238 EHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEM-KTAGYDM 296
Query: 163 DEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP--------------------DFV-- 200
D TY + + ++ L+ M+ F P D V
Sbjct: 297 DLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFR 356
Query: 201 -------TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLC 253
TG S S Y+ + S+GR EA EI + M G PD ++Y Q++ GLC
Sbjct: 357 VSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLC 416
Query: 254 KIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQ 313
K + +A + +M+ + C D T++ LI + +L+KA
Sbjct: 417 KAKRLEEARGVLDQMEAQ-GC--------------FPDIKTWTILIQGHCKNNELDKALA 461
Query: 314 LDYVMGHDGYLSDNVTLSVLLNGL 337
M G+ D+ L VL++G
Sbjct: 462 CFANMLEKGFDIDSNLLDVLIDGF 485
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 13/269 (4%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
TY + + + ++ V EM G+ LDTY V + F + + L E
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKV--SRQFQKSRMMAETVKLYE 322
Query: 82 MPERGLTADAVSYCHVICALLL-PPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
G ++ C ++ L P L F + + + G Y+ + +L
Sbjct: 323 YMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTS 382
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
VGR EA ++ + M G+ PD TY L+ C +A + +M +G PD
Sbjct: 383 VGRFDEAEEITKAM-RNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPD-- 439
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVK 260
+ T+ LI G+C + +AL F M E G D+ +I G +
Sbjct: 440 ------IKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEG 493
Query: 261 AYELKLEMDKKRSCLSLNEDTYETLMEQL 289
A +EM K + + TY+ L+++L
Sbjct: 494 ASIFLMEMVKNANVKPW-QSTYKLLIDKL 521
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 26/277 (9%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA EVLEEM KG+ Y+ LI +F + K+F+E + + V+
Sbjct: 266 EALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVV 325
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLG-----KAFE--M 115
G +E LE++ M + L V+ C ++CA++ ++ G K +E M
Sbjct: 326 LMYVREG-NMETTLEVVAAMRKAELK---VTDC-ILCAIVNGFSKQRGFAEAVKVYEWAM 380
Query: 116 KKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYC 175
K++ + VTY + I+ C + + ++A LF EM+ + GF Y N+M+ Y
Sbjct: 381 KEECE-----AGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK-GFDKCVVAYSNIMDMYG 434
Query: 176 LQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
S A L +M + G P++ YN+LI + ++ A +I++ M
Sbjct: 435 KTRRLSDAVRLMAKMKQR--------GCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKR 486
Query: 236 MGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
+ PD VSY +IS + +E + EL E R
Sbjct: 487 AKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNR 523
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 117/332 (35%), Gaps = 41/332 (12%)
Query: 145 SEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFS 204
S +F + G P Y +M + GE K L E + F+ S
Sbjct: 190 SSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRL--SFLAKES 247
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
S+ Y + GR EALE+ M + G+ + Y +I + RE V +L
Sbjct: 248 GSI--YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKL 305
Query: 265 KLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYL 324
E K+ L D + ++ Y+ +G++E ++ M
Sbjct: 306 FKEAGGKK---------------LLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELK 350
Query: 325 SDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRC-FGMPAYIIY-------------DTL 370
+ L ++NG +K EA W + C G Y I + L
Sbjct: 351 VTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEML 410
Query: 371 IENCSNNEFKRLVGP--------AITFSVKVAIKAHHTMLHGNYKPDGTVYNLLIFDHSR 422
+ F + V T + A++ M KP+ +YN LI H R
Sbjct: 411 FDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGR 470
Query: 423 SLEVHKAYNMYMEMVHYGFVPHMFSVLALIKA 454
++++ +A ++ EM +P S ++I A
Sbjct: 471 AMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA 502
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 115 MKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+ K M G++PD+ ++I + EA +F+EM G P+ +TY L+
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGS-EPNAYTYSYLVKGV 268
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLG---RVQEALEIFR 231
C +G + + EM KG +P+ Y LI CSL R+ EA+E+
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSC--------YMVLI---CSLSMERRLDEAVEVVY 317
Query: 232 GMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQL 289
M LSPD ++Y V++ LC+ +A E+ +E KKR + + E Y TLM+++
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGGRGSEALEM-VEEWKKRDPV-MGERNYRTLMDEV 373
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 9 EEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA 68
++M G+ P +I ++ + +A++VF+EM G P+ TY+ +++
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 69 GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDS 128
G + L +EM +G+ + Y +IC+L + E +L +A E+ DM + PD
Sbjct: 272 GR-VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSM--ERRLDEAVEVVYDMLANSLSPDM 328
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
+TY ++ LC GR SEA ++ E R E Y LM+
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEEWKKRDPVM-GERNYRTLMD 371
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 13/254 (5%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A +++ M TP TYT + ++C+E + ++ EM + G +P++ TY V+
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ + E AL + +M E G DA Y +I +L + A E+ +DM ++
Sbjct: 351 HSLGKSKQVAE-ALGVYEKMKEDGCVPDAKFYSSLIH--ILSKTGRFKDAAEIFEDMTNQ 407
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGG--FSPDEHTYFNLMNCYCLQGEF 180
G+ D + Y +I R A L + M G SP+ TY L+ C + +
Sbjct: 408 GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKM 467
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
L H MV S + TY LI G C G+V+EA F G+ P
Sbjct: 468 KLLGILLHHMVK--------NDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Query: 241 DTVSYRQVISGLCK 254
+ + ++ L K
Sbjct: 520 RDSTCKMLVDELEK 533
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 141/366 (38%), Gaps = 52/366 (14%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ D++ L+D L + A ++F ++ PD T+ L++ +C +F
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF--DTIKPDARTFNILIHGFCKARKFDD 291
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A + M VT F+P +VTY + + YC G + E+ M E G +P+
Sbjct: 292 ARAMMDLMK--------VTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQ--LSDEDTYSSLIN 300
V+Y V+ L K ++ +A + YE + E + D YSSLI+
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGV-----------------YEKMKEDGCVPDAKFYSSLIH 386
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFG 360
G + A ++ M + G D + + +++ +R A L
Sbjct: 387 ILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL---------- 436
Query: 361 MPAYIIYDTLIENCSNNEFKRLVGPAITFSVK------VAIKAHHTMLHGNYKPDGTVYN 414
+ D E+CS N P + + I HH M+ + D + Y
Sbjct: 437 ---KRMEDEEGESCSPN--VETYAPLLKMCCHKKKMKLLGILLHH-MVKNDVSIDVSTYI 490
Query: 415 LLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHNTLRS 474
LLI S +V +A + E V G VP + L+ L E I + ++S
Sbjct: 491 LLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN-MAEAKLKIQSLVQS 549
Query: 475 CNLSDS 480
+ DS
Sbjct: 550 KTMIDS 555
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA V E+M G P + Y+ LIH + R A ++F +M ++G + YN
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 61 VIQTNAFAGTGIEVALEILREMPE---RGLTADAVSYCHVICALLLPPEEKLGKAFEMKK 117
+I A + E+AL +L+ M + + + +Y ++ + KL
Sbjct: 419 MISA-ALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHM 477
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+D I D TY +LI LC G++ EA F E + R G P + T C L
Sbjct: 478 VKNDVSI--DVSTYILLIRGLCMSGKVEEACLFFEEAV-RKGMVPRDST------CKMLV 528
Query: 178 GEFSK 182
E K
Sbjct: 529 DELEK 533
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 13/267 (4%)
Query: 5 EEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT 64
EE+ EM G+ TY+ +I + + +KA++ F M G P TY+A++
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
+ +G +E L + G DA+++ V+ + + G + + ++M +
Sbjct: 266 YSKSGK-VEEVLSLYERAVATGWKPDAIAF-SVLGKMFGEAGDYDGIRYVL-QEMKSMDV 322
Query: 125 LPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAF 184
P+ V Y L++ + G+ A LF EML G +P+E T L+ Y A
Sbjct: 323 KPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE-AGLTPNEKTLTALVKIYGKARWARDAL 381
Query: 185 HLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE-MGLSPDTV 243
L EM K + DF + YN L+ +G +EA +F M E + PD
Sbjct: 382 QLWEEMKAKKWPMDF--------ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNF 433
Query: 244 SYRQVISGLCKIREPVKAYELKLEMDK 270
SY +++ + KA EL EM K
Sbjct: 434 SYTAMLNIYGSGGKAEKAMELFEEMLK 460
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 149/380 (39%), Gaps = 67/380 (17%)
Query: 119 MDDKGILP-DSVTYEVLIDNLCWVGRLSEAFDLFREM---LHRGGFSPDEHTYFNLMNCY 174
+ K + P +++ Y V + +L R F L EM + + G D TY ++ C
Sbjct: 176 VKSKSLFPMETIFYNVTMKSL----RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCA 231
Query: 175 CLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
++KA M G +PD VTY+A++ Y G+V+E L ++
Sbjct: 232 KRCNLYNKAIEWFERMYKTGLMPD--------EVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 235 EMGLSPDTVSYRQVISGLCKIREPVKAYE-LKLEMDKKRSC-LSLNEDTYETLMEQLSDE 292
G PD +++ S L K+ Y+ ++ + + +S + N Y TL+E +
Sbjct: 284 ATGWKPDAIAF----SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMG-- 337
Query: 293 DTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN--GLNKIARTTEAKWYL 350
G A L M G + TL+ L+ G + AR W
Sbjct: 338 -----------RAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386
Query: 351 L----WTVFFRCFGMPAYIIYDTLIENCSN----NEFKRLVGPAITFSVKVAIKAHHTML 402
+ W + F I+Y+TL+ C++ E +RL +K +++
Sbjct: 387 MKAKKWPMDF--------ILYNTLLNMCADIGLEEEAERLFN-----DMKESVQC----- 428
Query: 403 HGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYN 462
+PD Y ++ + + KA ++ EM+ G ++ L++ L R +
Sbjct: 429 ----RPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRID 484
Query: 463 EMSWVIHNTLRSCNLSDSEL 482
++ +V +++ D L
Sbjct: 485 DVVYVFDLSIKRGVKPDDRL 504
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 28/266 (10%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV-----IQTNAFAGTGIEVAL 76
T T +I + C +A+ V D L Y ++ +Q N ++ A
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRN------VKEAR 228
Query: 77 EILREMPERGLTADAVSYCHVICALL-----LPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
++++M G+T D + ++ L P + +A + +M I P S++Y
Sbjct: 229 RVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSY 288
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
+L+ L R+ E+ + E + R G PD +Y+ ++ L G F K + EM+
Sbjct: 289 NILLSCLGRTRRVRESCQIL-EQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMI 347
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
+GF P+ F Y LI C + RV AL++F M + Y +I
Sbjct: 348 ERGFRPE--RKF------YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPK 399
Query: 252 LCKIREPVKAYEL---KLEMDKKRSC 274
LCK K EL L +D SC
Sbjct: 400 LCKGGNFEKGRELWEEALSIDVTLSC 425
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQES-------RASKAVKVFREMIDRGFSP 53
+ EA V+++M G+TP + L+ C+ + +A+ + EM P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 54 SLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAF 113
+ +YN ++ + + +IL +M G D SY V+ L L + GK
Sbjct: 284 TSMSYNILLSCLGRT-RRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG--RFGKGN 340
Query: 114 EMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNC 173
++ +M ++G P+ Y LI LC V R++ A LF E + R Y L+
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLF-EKMKRSSVGGYGQVYDLLIPK 399
Query: 174 YCLQGEFSKAFHLHHE 189
C G F K L E
Sbjct: 400 LCKGGNFEKGRELWEE 415
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 39/310 (12%)
Query: 20 ERT---YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVAL 76
ERT + +I + Q A +A+ +F +M+D G +P T+ +VI+ + G ++
Sbjct: 279 ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS-QLGQ 337
Query: 77 EILREMPERGLTADAVSYCHVICALL-----LPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
I + + G DA ++CAL+ E KAFE D++ K D++ +
Sbjct: 338 SIHAYVSKTGFVKDAA----IVCALVNMYAKTGDAESAKKAFE---DLEKK----DTIAW 386
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
V+I L G +EA +F+ M +G +PD TY ++ G + EM
Sbjct: 387 TVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMR 446
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
+ G P++ Y ++ GR +EA + + MP + P+ + +++G
Sbjct: 447 D-------LHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP---VKPNVNIWGALLNG 496
Query: 252 LCKIREPVKAYELKLEM-DKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEK 310
C I E LE+ D+ RS ++ E+ + LS+ + D + K
Sbjct: 497 -CDIHE-------NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMK 548
Query: 311 AYQLDYVMGH 320
+ ++D V+GH
Sbjct: 549 SKRVDKVLGH 558
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 138/373 (36%), Gaps = 84/373 (22%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA----------- 66
P + +I + KA+ ++EM+ +G+SP T+ V++ +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 67 ---FAGTGIEV--------------------ALEILREMPERGLTADAVSYCHVICALLL 103
TG EV L + ++P+ + V++ +I +
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ----WNVVAWGSLISGFV- 184
Query: 104 PPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAF--DLFREMLHRGGFS 161
+ A E ++M G+ + +++D L GR + F L GF
Sbjct: 185 -NNNRFSDAIEAFREMQSNGVKANET---IMVDLLVACGRCKDIVTGKWFHGFLQGLGFD 240
Query: 162 P--DEHTYFN------LMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNAL 213
P FN L++ Y G+ A +L M + +LV++N++
Sbjct: 241 PYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER------------TLVSWNSI 288
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I GY G +EAL +F M ++G++PD V++ VI + M + S
Sbjct: 289 ITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI---------------RASMIQGCS 333
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL 333
L + Y + + D +L+N Y GD E A + D D + +V+
Sbjct: 334 QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKK----AFEDLEKKDTIAWTVV 389
Query: 334 LNGLNKIARTTEA 346
+ GL EA
Sbjct: 390 IIGLASHGHGNEA 402
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 145/344 (42%), Gaps = 44/344 (12%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
+++++ H TP++ + L+ + C+ KA + F + F ++ +N ++
Sbjct: 213 DIMDKFKH---TPYDEAFQGLLCALCRHGHIEKAEE-FMLASKKLFPVDVEGFNVILNGW 268
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFE---MKKDMDDK 122
T + A I REM +T + SY H+I K+G F+ + +M +
Sbjct: 269 CNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCF-----SKVGNLFDSLRLYDEMKKR 323
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G+ P Y L+ L EA L ++ L+ G PD TY +++ C G+
Sbjct: 324 GLAPGIEVYNSLVYVLTREDCFDEAMKLMKK-LNEEGLKPDSVTYNSMIRPLCEAGKLDV 382
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A ++ M+ + SP++ T++A + ++ LE+ M L P
Sbjct: 383 ARNVLATMISENL--------SPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTE 430
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDY 302
++ ++ L K ++P A ++ EMD+ E +++ Y + I
Sbjct: 431 ETFLLILGKLFKGKQPENALKIWAEMDR---------------FEIVANPALYLATIQGL 475
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVL----LNGLNKIAR 342
L+ G LEKA ++ M G++ + + +L + G+ K R
Sbjct: 476 LSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQKVKGVRKSKR 519
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 111/242 (45%), Gaps = 24/242 (9%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+TEA+ + EM + +TP++ +Y+ +I F + +++++ EM RG +P ++ YN+
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 61 VI----QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK 116
++ + + F + A+++++++ E GL D+V+Y +I L KL A +
Sbjct: 335 LVYVLTREDCF-----DEAMKLMKKLNEEGLKPDSVTYNSMIRPLC--EAGKLDVARNVL 387
Query: 117 KDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCL 176
M + + P T+ ++ + + ++ +M P E T+ ++
Sbjct: 388 ATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQM-KISDLGPTEETFLLILGKLFK 442
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+ A + EM F +P+L Y A I G S G +++A EI+ M
Sbjct: 443 GKQPENALKIWAEM------DRFEIVANPAL--YLATIQGLLSCGWLEKAREIYSEMKSK 494
Query: 237 GL 238
G
Sbjct: 495 GF 496
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 41/313 (13%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E LE+M++K L ++ +I + + ++ A +F M++ G +P TY V+ T
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 66 A---FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
A AG G ++ ++++ + L +D IC+ L+ K G + + M +K
Sbjct: 614 ANLASAGLGKQIHAQVIK----KELQSDVY-----ICSTLVDMYSKCGDLHD-SRLMFEK 663
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
+ D VT+ +I G+ EA LF M+ P+ T+ +++ G K
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-IKPNHVTFISILRACAHMGLIDK 722
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
+ M D+ G P L Y+ ++ G+V+ ALE+ R MP D
Sbjct: 723 GLEYFYMMKR-----DY--GLDPQLPHYSNMVDILGKSGKVKRALELIREMP---FEADD 772
Query: 243 VSYRQVISGLCKI-REPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIND 301
V +R ++ G+C I R V+ E E T L D Y+ L N
Sbjct: 773 VIWRTLL-GVCTIHRNNVEVAE---------------EATAALLRLDPQDSSAYTLLSNV 816
Query: 302 YLAQGDLEKAYQL 314
Y G EK L
Sbjct: 817 YADAGMWEKVSDL 829
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 130/350 (37%), Gaps = 76/350 (21%)
Query: 19 HERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEI 78
+ ++Y +I + QE KA+ +F ++ G + + V + A G+ L+I
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV-KGLSEGLQI 404
Query: 79 LREMPERGLTADAVSYCHVICAL-LLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
+ L+ D C A+ + + L +AF + +M + D+V++ +I
Sbjct: 405 YGLAIKSSLSLDV---CVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAA 457
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
G+ E LF ML R PDE T+ +++ C G +H +V G
Sbjct: 458 HEQNGKGYETLFLFVSML-RSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMAS 515
Query: 198 DFVTGFS-------------------------------------------PSLVTYNALI 214
+ G S V++N++I
Sbjct: 516 NSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSII 575
Query: 215 YGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSC 274
GY + ++A +F M EMG++PD +Y V+ + ++ ++ KK
Sbjct: 576 SGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE-- 633
Query: 275 LSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDL-------EKAYQLDYV 317
L D Y S+L++ Y GDL EK+ + D+V
Sbjct: 634 --LQSDVY-----------ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 179/430 (41%), Gaps = 89/430 (20%)
Query: 44 REMIDRGFS-PSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALL 102
RE+ DR S ++ T+ A++ + + +A + +EMPER + VS+ +I
Sbjct: 97 RELFDRVDSRKNVVTWTAMV-SGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGY- 150
Query: 103 LPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSP 162
++ KA E+ +M ++ I V++ ++ L GR+ EA +LF M R
Sbjct: 151 -AQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRR----- 200
Query: 163 DEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGR 222
D ++ +++ G+ +A L M + +++++NA+I GY R
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPER------------NIISWNAMITGYAQNNR 248
Query: 223 VQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTY 282
+ EA ++F+ MPE D S+ +I+G + RE KA L M +K
Sbjct: 249 IDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI-------- 296
Query: 283 ETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT--LSVL-----LN 335
+++++I Y+ + E+A + M DG + NV +S+L L
Sbjct: 297 -----------SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 336 GLNK-------IARTTEAKWYLLWTVFFRCFGMPAYII-YDTLIEN---CSNNEFKRLVG 384
GL + I+++ K ++ + + +I + +N C +
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD------- 398
Query: 385 PAITFSVKVAIKAHH-----------TMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMY 433
I+++ +A+ AHH M +KP Y L+F S + V K +
Sbjct: 399 -LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Query: 434 MEMVHYGFVP 443
++V +P
Sbjct: 458 KDLVRDESLP 467
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 44/253 (17%)
Query: 72 IEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTY 131
I A ++ +PER D V++ HVI + KLG E ++ D + VT+
Sbjct: 62 IAEARKLFDGLPER----DVVTWTHVITGYI-----KLGDMREARELFDRVDSRKNVVTW 112
Query: 132 EVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMV 191
++ +LS A LF+EM R S + +++ Y G KA L EM
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVS-----WNTMIDGYAQSGRIDKALELFDEMP 167
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
+ ++V++N+++ GR+ EA+ +F MP D VS+ ++ G
Sbjct: 168 ER------------NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDG 211
Query: 252 LCKIREPVKAYELKLEMDKKRSCLSLNE-----------DTYETLMEQLSDED--TYSSL 298
L K + +A L + +R+ +S N D + L + + + D +++++
Sbjct: 212 LAKNGKVDEARRL-FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTM 270
Query: 299 INDYLAQGDLEKA 311
I ++ ++ KA
Sbjct: 271 ITGFIRNREMNKA 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 44/270 (16%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA + E M + + ++T ++ + + +A ++F M +R ++ ++NA
Sbjct: 187 IDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNA 238
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+I T I+ A ++ + MPER D S+ +I + E + KA + M
Sbjct: 239 MI-TGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNRE--MNKACGLFDRMP 291
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN-CYCLQGE 179
+K + +++ +I EA ++F +ML G P+ TY ++++ C L G
Sbjct: 292 EKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 180 ---------FSKAFHLHHEMVHKGFL-------------PDFVTGF--SPSLVTYNALIY 215
SK+ H +E+V L F G L+++N++I
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
Y G +EA+E++ M + G P V+Y
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
M EA +LE M +E ++TC+I + + RAS+A++VF+ M+ P T A
Sbjct: 198 MDEARSLLEMM--PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V+ A G+ +E+ I + RG+ AVS + + + + KA ++ + ++
Sbjct: 256 VLSACADLGS-LELGERICSYVDHRGMN-RAVSLNNAVID-MYAKSGNITKALDVFECVN 312
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
++ + VT+ +I L G +EA +F M+ + G P++ T+ +++ G
Sbjct: 313 ERNV----VTWTTIIAGLATHGHGAEALAMFNRMV-KAGVRPNDVTFIAILSACSHVGWV 367
Query: 181 SKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMP 234
L + M K G P++ Y +I G+++EA E+ + MP
Sbjct: 368 DLGKRLFNSMRSK-------YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 123/547 (22%), Positives = 204/547 (37%), Gaps = 156/547 (28%)
Query: 44 REMIDRGFSPSLDTYNAVIQTNA----FAGTG-IEVALEILREMPERGL-TADAVSYCHV 97
R ++D+ P + N V+ + +A TG ++ A + MPER + T +A+ +V
Sbjct: 62 RHLLDK--IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYV 119
Query: 98 ICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHR 157
C ++ +A+ + ++M + V++ V++ LC GR +A +LF EM R
Sbjct: 120 KC-------RRMNEAWTLFREMP-----KNVVSWTVMLTALCDDGRSEDAVELFDEMPER 167
Query: 158 GGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEM----------VHKGFLPD--------- 198
S + L+ G+ KA + M + KG++ +
Sbjct: 168 NVVS-----WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 199 FVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREP 258
F ++VT+ +++YGYC G V+EA +F MPE + VS+ +ISG
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWNELY 278
Query: 259 VKAYELKLEMDKKRSCLSLNEDT--------------YETLMEQLS-----------DED 293
+A L LEM K +S N +T + L EQL D D
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHD 338
Query: 294 ---------TYSS----------------------LINDYLAQGDLEKAYQL-------- 314
Y+S +IN YL GDLE+A L
Sbjct: 339 GRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 315 ---DYVMGHDGYL-----------------SDNVTLSVLLNGLNKIARTTEAKWYLLWTV 354
+ DGYL D VT +V+++GL + EA L +
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLL--SD 456
Query: 355 FFRCFGMPAYIIYDTLIENC---SNNEFKRLVGPAITFSVKV------------------ 393
RC P Y L+ + SN + + + I +
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 394 -AIKAHHTMLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALI 452
AI+ + + + D +N +I S KA N++ EM+ G P+ + L ++
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVL 576
Query: 453 KALHYDG 459
A + G
Sbjct: 577 SACSHSG 583
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 27/275 (9%)
Query: 2 TEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESR--ASKAVKVFREMIDRGFSPSLDTYN 59
EA +L +M GL P TY+ L+ S S K + + P L N
Sbjct: 448 AEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+++ A G IE A EI +M ++ D VS+ +I L KA + K+M
Sbjct: 508 SLVSMYAKCGA-IEDAYEIFAKMVQK----DTVSWNSMIMGL--SHHGLADKALNLFKEM 560
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D G P+SVT+ ++ G ++ +LF+ M P Y ++++ G+
Sbjct: 561 LDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGK 620
Query: 180 FSKAFHLHHEMVHKGFLPDFVTG--FSPSLVTYNALIYGYCSLG-RVQEALEIFRGMPEM 236
+A +F++ F+P Y AL+ G C L R ++A I
Sbjct: 621 LKEA-------------EEFISALPFTPDHTVYGALL-GLCGLNWRDKDAEGIAERAAMR 666
Query: 237 GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
L D V+ ++ LC + + ++++ EM K+
Sbjct: 667 LLELDPVNAPGHVA-LCNVYAGLGRHDMEKEMRKE 700
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRG---FSPSLDTYN 59
E ++++ ++ +E Y +I F + + +AV +FR M+ P++ TY+
Sbjct: 190 EMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYH 249
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+ + A G G + + Y + +L + M
Sbjct: 250 ILFK--ALLGRGNNSYINHV--------------YMETVRSLF--------------RQM 279
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGE 179
D GI PD L+ +++A +F +M P+ TY L++ C QG
Sbjct: 280 VDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGR 339
Query: 180 FSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
A L EM KGF+P+ G S YN+L+ + G + +A++ M E G
Sbjct: 340 TINARELLSEMKGKGFVPN---GKS-----YNSLVNAFALSGEIDDAVKCLWEMIENGRV 391
Query: 240 PDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLI 299
D +SYR ++ C+ + +A L LEM +++ QL D D+Y L+
Sbjct: 392 VDFISYRTLVDESCRKGKYDEATRL-LEMLREK---------------QLVDRDSYDKLV 435
Query: 300 N 300
N
Sbjct: 436 N 436
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 26/239 (10%)
Query: 107 EKLGKAFEMKKDMDD--KGILP-----DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGG 159
KLG A +M ++MDD +L + Y +I G+L A ++FR M+
Sbjct: 180 RKLGAA-KMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKN 238
Query: 160 F--SPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGY 217
P TY L +G S H++ E V F +G P + N L+ GY
Sbjct: 239 LECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGY 298
Query: 218 CSLGRVQEALEIFRGMPEM-GLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLS 276
V +AL IF M + P++ +Y +I GLC + A EL EM K
Sbjct: 299 VLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK----- 353
Query: 277 LNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN 335
+ + +Y+SL+N + G+++ A + + M +G + D ++ L++
Sbjct: 354 ----------GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVD 402
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 6/173 (3%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREM-IDRGFSPSLDTYN 59
M + +M G+ P CL+ + + A+++F +M + P+ TY+
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 60 AVIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDM 119
+I G I A E+L EM +G + SY ++ A L E + A + +M
Sbjct: 329 YLIHGLCAQGRTIN-ARELLSEMKGKGFVPNGKSYNSLVNAFALSGE--IDDAVKCLWEM 385
Query: 120 DDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
+ G + D ++Y L+D C G+ EA L EML D +Y L+N
Sbjct: 386 IENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLV-DRDSYDKLVN 436
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 22/252 (8%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIE 73
KG +I + + R + A ++F + R + ++N++I T
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMI-TRCAQSDNPS 524
Query: 74 VALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEV 133
A++I R+M G+ D VS + A P E GKA + M + D +
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA--IHGFMIKHSLASDVYSEST 582
Query: 134 LIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ-GEFSKAFHLHHEMVH 192
LID G L A ++F+ M + S +N + C G+ + L HEMV
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVS------WNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE-MGLSPDTVSYRQVISG 251
K +G P +T+ +I C +G V E + FR M E G+ P Y V+
Sbjct: 637 K-------SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 252 LCKIREPVKAYE 263
+ +AYE
Sbjct: 690 FGRAGRLTEAYE 701
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 106/285 (37%), Gaps = 58/285 (20%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF--------- 51
M A E+ E + + + ++ +I Q S A+ +FR+M G
Sbjct: 492 MNLAYEIFERLSKRDIV----SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 52 ------------------------SPSLDTYNAVIQTNAFAGTG-IEVALEILREMPERG 86
S + D Y+ + +A G ++ A+ + + M E+
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 87 LTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK-GILPDSVTYEVLIDNLCWVGRLS 145
+ VS+ +I A KL + + +M +K GI PD +T+ +I + C VG +
Sbjct: 608 I----VSWNSIIAAC--GNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
E FR M G P + Y +++ + G ++A+ M F P
Sbjct: 662 EGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM-----------PFPP 710
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVIS 250
+ L+ G C L + E E+ M L P Y +IS
Sbjct: 711 DAGVWGTLL-GACRLHKNVELAEVASS-KLMDLDPSNSGYYVLIS 753
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 130/311 (41%), Gaps = 53/311 (17%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALE 77
P++ +++ +I +CQ S+ +AVK F+ SL + NA I N+F T I A
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFK---------SLRSKNASI-LNSFTYTSIFQACS 398
Query: 78 ILREMPERG-LTADAVSYCHVIC----ALLLPPEEKLG---KAFEMKKDMDDKGILPDSV 129
+L + G + ADA+ + + L+ K G A E+ + MD+ PD V
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN----PDIV 454
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
+ I + G SEA LF +M+ G P+ T+ ++ G + H
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMV-SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDT 513
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M+ K +P++ Y+ +I Y G + EAL+ + MP PD +S++ +
Sbjct: 514 MLRK-------YNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP---FEPDAMSWKCFL 563
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDT--YSSLINDYLAQGD 307
SG + L L E E L QL EDT Y N Y G
Sbjct: 564 SGCWTHKN-----------------LELGEIAGEEL-RQLDPEDTAGYVLPFNLYTWAGK 605
Query: 308 LEKAYQLDYVM 318
E+A ++ +M
Sbjct: 606 WEEAAEMMKLM 616
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I PD ++LI C +L EA L EM RGGF Y +++C C
Sbjct: 241 IFPDENICDLLISGWCIAEKLDEATRLAGEM-SRGGFEIGTKAYNMMLDCVCKLCRKKDP 299
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
F L E V K L G + T+N LI C + R +EA+ +F M E G PD
Sbjct: 300 FKLQPE-VEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAE 358
Query: 244 SYRQVISGL 252
+Y +I L
Sbjct: 359 TYLVLIRSL 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 14/270 (5%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
GL + + T ++ C++ AS A K+ + + F P + + +I A ++
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF-PDENICDLLISGWCIA-EKLDE 263
Query: 75 ALEILREMPERGLTADAVSY---CHVICALLLPPEE-KLGKAFE-MKKDMDDKGILPDSV 129
A + EM G +Y +C L + KL E + +M+ +G+ ++
Sbjct: 264 ATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTE 323
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
T+ VLI+NLC + R EA LF M G PD TY L+ + + +
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRM-GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDK 382
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
M G+ G + Y + C + R++ A+ +F+ M G P +Y ++
Sbjct: 383 MKSAGY------GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM 436
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNE 279
+C + +A L E KK +S E
Sbjct: 437 GKMCANNQLTRANGLYKEAAKKGIAVSPKE 466
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 17/217 (7%)
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
T E ID L GR + D F +M + G D+ + ++ C +G S A +
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
++ F P + LI G+C ++ EA + M G T +Y ++
Sbjct: 237 TANEIF---------PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMML 287
Query: 250 SGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLE 309
+CK+ ++L+ E++K L E + + + +T++ LIN+ E
Sbjct: 288 DCVCKLCRKKDPFKLQPEVEK-----VLLEMEFRGVPR---NTETFNVLINNLCKIRRTE 339
Query: 310 KAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
+A L MG G D T VL+ L + AR E
Sbjct: 340 EAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEG 376
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 134/337 (39%), Gaps = 29/337 (8%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREM-IDRGFSPSLDTYNAVIQTNAFAGTGIEVAL 76
P + Y +I + + S+ V + + F + VI F+G IE A+
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGR-IEEAI 128
Query: 77 EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
E+ ++P A + + + +L+ + L E+ G+ + T+ +LID
Sbjct: 129 EVFFKIPNFRCVPSAYTL-NALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILID 187
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
LC +G + A +L R M + D Y L++ C + S F + G+L
Sbjct: 188 ALCRIGEVDCATELVRYM-SQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVI------GYL 239
Query: 197 PDF-VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKI 255
D T FSP L Y ++ GR +E + + M + PD V Y V+ G+
Sbjct: 240 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 299
Query: 256 REPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLD 315
+ KA +L E+ D Y TY+ IN Q D+E A ++
Sbjct: 300 EDYPKADKLFDELLLLGLA----PDVY-----------TYNVYINGLCKQNDIEGALKMM 344
Query: 316 YVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLW 352
M G + VT ++L+ L K + AK LW
Sbjct: 345 SSMNKLGSEPNVVTYNILIKALVKAGDLSRAK--TLW 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
E+ K TP E + +I ++ R +A++VF ++ + PS T NA++
Sbjct: 99 EVSEKFDTP-ESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKR 157
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
+E+ EIL + G+ + ++ +I AL E + A E+ + M ++ D
Sbjct: 158 QSLELVPEILVKACRMGVRLEESTFGILIDALCRIGE--VDCATELVRYMSQDSVIVDPR 215
Query: 130 TYEVLIDNLCWVGRLSEAFDL--FREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
Y L+ ++C + S FD+ + E L + FSP Y +M G + +
Sbjct: 216 LYSRLLSSVCK-HKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVL 274
Query: 188 HEMVHKGFLPDFV---------------------------TGFSPSLVTYNALIYGYCSL 220
++M PD V G +P + TYN I G C
Sbjct: 275 NQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 221 GRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNED 280
++ AL++ M ++G P+ V+Y +I L K + +A L EM+ + ++ N
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET--NGVNRNSH 392
Query: 281 TYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLD 315
T++ ++ + D A G LE+A+ ++
Sbjct: 393 TFDIMISAYIEVDEV------VCAHGLLEEAFNMN 421
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT---GIEVALEI 78
+++ +I S+ Q + +A+ +FR+M+ P+ T +V+Q A G +
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 79 LREMPERGL-TADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
++ E L TA AV + C P KAFE + + D+V + L
Sbjct: 428 IKADIESELETATAVISMYAKCGRFSPAL----KAFE-------RLPIKDAVAFNALAQG 476
Query: 138 LCWVGRLSEAFDLFREM-LHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF- 195
+G ++AFD+++ M LH G PD T ++ ++++ ++ +++ GF
Sbjct: 477 YTQIGDANKAFDVYKNMKLH--GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD 534
Query: 196 --------LPDFVT---------------GFSPSLVTYNALIYGYCSLGRVQEALEIFRG 232
L + T GF S V++N ++ GY G+ +EA+ FR
Sbjct: 535 SECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Query: 233 MPEMGLSPDTVSYRQVI 249
M P+ V++ ++
Sbjct: 595 MKVEKFQPNAVTFVNIV 611
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 99/258 (38%), Gaps = 40/258 (15%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFA---GTGIEVALEI 78
+ L + Q A+KA V++ M G P T ++QT AF G V +I
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 79 LREMPERGLTADAVSYCHVICAL--LLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
++ + S CHV AL + + L A + D G +V++ ++++
Sbjct: 529 IKHGFD--------SECHVAHALINMFTKCDALAAAIVL---FDKCGFEKSTVSWNIMMN 577
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
G+ EA FR+M F P+ T+ N++ +H ++ GF
Sbjct: 578 GYLLHGQAEEAVATFRQM-KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 197 PDFVTGFS-----------------------PSLVTYNALIYGYCSLGRVQEALEIFRGM 233
G S +V++N ++ Y + G A+ +F M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 234 PEMGLSPDTVSYRQVISG 251
E L PD+VS+ V+S
Sbjct: 697 QENELKPDSVSFLSVLSA 714
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 174/448 (38%), Gaps = 58/448 (12%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+ + M GL P+ + + KA VF E + + + + TY+ +++
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGHTYSLMLK 184
Query: 64 TNAFAGTGIEVALEILREM---PERGLTADAVSYCHVI--CALLLPPEEKLGKAFEMKKD 118
A G E AL + RE+ P+R D V Y I C ++ +E ++
Sbjct: 185 AVAEV-KGCESALRMFRELEREPKRRSCFDVVLYNTAISLCG-------RINNVYETERI 236
Query: 119 ---MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYC 175
M G + +TY +L+ GR A D++ EM++ S E + +++
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVN-NKISLREDAMYAMISACT 295
Query: 176 LQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE 235
+ ++ A + M+ KG P+LV N LI G+V +++ +
Sbjct: 296 KEEKWDLALKIFQSMLKKGM--------KPNLVACNTLINSLGKAGKVGLVFKVYSVLKS 347
Query: 236 MGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY 295
+G PD ++ +++ L K +L +M + + LNE Y T M
Sbjct: 348 LGHKPDEYTWNALLTALYKANRYEDVLQL-FDMIRSENLCCLNEYLYNTAMVSCQK---- 402
Query: 296 SSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVF 355
G EKA +L Y M G + +++++ K ++ A L++
Sbjct: 403 ---------LGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVA--LLVYEHM 451
Query: 356 FRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDGTVYNL 415
+ P Y +L+ +C + ++ V+ +K +PD ++YN
Sbjct: 452 AQRDCKPNTFTYLSLVRSC--------IWGSLWDEVEDILK--------KVEPDVSLYNA 495
Query: 416 LIFDHSRSLEVHKAYNMYMEMVHYGFVP 443
I E A +Y++M G P
Sbjct: 496 AIHGMCLRREFKFAKELYVKMREMGLEP 523
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 139/339 (41%), Gaps = 35/339 (10%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
E E + M G E TY+ L+ F + R+ A+ V+ EM++ S D A+I
Sbjct: 232 ETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI 291
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
++AL+I + M ++G+ + V+ +I + L K+G F++ +
Sbjct: 292 SA-CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINS--LGKAGKVGLVFKVYSVLKSL 348
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
G PD T+ L+ L R + LF + +E+ Y M G + K
Sbjct: 349 GHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 183 AFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDT 242
A L +EM +G +G + S +YN +I + + AL ++ M + P+T
Sbjct: 409 AVKLLYEM--EG------SGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNT 460
Query: 243 VSYRQVISGLCKIREPVKAYELKLEMDKKRSCL--SLNEDTYETLMEQLSDEDTYSSLIN 300
+Y ++ RSC+ SL ++ + L + D Y++ I+
Sbjct: 461 FTYLSLV----------------------RSCIWGSLWDEVEDILKKVEPDVSLYNAAIH 498
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK 339
+ + + A +L M G D T +++L L K
Sbjct: 499 GMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 109/279 (39%), Gaps = 43/279 (15%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A +V E M + T T+ ++ FCQ KA +FREM +P T +IQ
Sbjct: 106 AAKVFERMPERDAT----TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ 161
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMK-----KD 118
+ +F E +L++L M G+ V + + K G K D
Sbjct: 162 SASF-----EKSLKLLEAMHAVGIRL-GVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
D+ + V++ + G +AF L+ ML R F PD T+ NL
Sbjct: 216 RGDRTV----VSWNSMFKAYSVFGEAFDAFGLYCLML-REEFKPDLSTFINLAASCQNPE 270
Query: 179 EFSKAFHLHHEMVHKGFLPD------FVTGFSPS-----------------LVTYNALIY 215
++ +H +H G D F++ +S S V++ +I
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 216 GYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
GY G + EAL +F M + G PD V+ +ISG K
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 26/250 (10%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVALEILRE 81
++T +I + ++ +A+ +F MI G P L T ++I +G G +LE +
Sbjct: 324 SWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI-----SGCGKFGSLETGKW 378
Query: 82 MPER----GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDN 137
+ R G D V +IC L+ K G E +D+ D VT+ +I
Sbjct: 379 IDARADIYGCKRDNV----MICNALIDMYSKCGSIHE-ARDIFDNTPEKTVVTWTTMIAG 433
Query: 138 LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
G EA LF +M+ + P+ T+ ++ G K + H M
Sbjct: 434 YALNGIFLEALKLFSKMIDLD-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ----- 487
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
V SP L Y+ ++ G+++EALE+ R M PD + +++ CKI
Sbjct: 488 --VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA---KPDAGIWGALLNA-CKIHR 541
Query: 258 PVKAYELKLE 267
VK E E
Sbjct: 542 NVKIAEQAAE 551
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 3 EAEEVLEEMYHKGL-TPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
+A +LEEM +G + Y ++ ++C+E R ++A ++ E+ G ++ NA+
Sbjct: 380 KAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNAL 439
Query: 62 IQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDD 121
I+ + I A + R+M E + SY ++ LL +L AF + + ++D
Sbjct: 440 IEASMTNQDFIS-AFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAF-LDEVVED 497
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+ +S + +I C GRL +A FR M+ + P+ TY +L+N Y ++
Sbjct: 498 PRVEVNSHDWNSIIHAFCKSGRLEDARRTFRRMVFLR-YEPNNQTYLSLINGYVSGEKYF 556
Query: 182 KAFHLHHEMVHKGFLPDFVTGFSPSL--VTYNALIYGYCSLGRVQEALEIFRGMPEMGLS 239
L +E+ KG + L +A +Y G A+++ EM +
Sbjct: 557 NVLLLWNEI--KGKISSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIF 614
Query: 240 PDTVSYRQV 248
D Y+Q
Sbjct: 615 VDKWRYKQA 623
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 136/339 (40%), Gaps = 25/339 (7%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ +AE V+E M G+ P E ++ L + + ++ K ++ M GF+ Y+
Sbjct: 232 LADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELENLMDGFGFASRRILYSN 291
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTA--DAVSYCHVICALLLPPEEK-LGKAFEMKK 117
+I +G V+ IL + E G + +YC ++ + K L K +
Sbjct: 292 MISGYVKSGDLDSVSDVILHSLKEGGEESSFSVETYCELVKGFIESKSVKSLAKVILEAQ 351
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
++ + DS +I+ +G +A + EM+ +GG S Y ++ YC +
Sbjct: 352 KLESSYVGVDSSVGFGIINACVNLGFSDKAHSILEEMIAQGGGSVGIGVYVPILKAYCKE 411
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
++A L E+ G D + NALI + A +FR M E
Sbjct: 412 YRTAEATQLVTEISSSGLQLD--------VEISNALIEASMTNQDFISAFTLFRDMRENR 463
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSS 297
+ SY +++GL LE + + ++ E +++ D ++S
Sbjct: 464 VVDLKGSYLTIMTGL-------------LENQRPELMAAFLDEVVEDPRVEVNSHD-WNS 509
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG 336
+I+ + G LE A + M Y +N T L+NG
Sbjct: 510 IIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLING 548
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 115/304 (37%), Gaps = 72/304 (23%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT----------G 71
+YT LI + Q ++ S+A+++FREM + G + T VI + G
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 72 IEVALE------------------------ILREMPERGLTADAVSYCHVICALLLPPEE 107
I++ LE + EMPER L V ++L
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL---------VTWNVMLNGYS 250
Query: 108 KLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTY 167
K G E +++ D+ D V++ +ID +L EA + EML R G P E
Sbjct: 251 KAG-LIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML-RCGMKPSEVMM 308
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGF-----------------------LPDFVTGFS 204
+L++ SK LH +V +GF L F
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 205 PSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYEL 264
+ + NALI G+ G V++A E+F + D S+ +ISG + P A L
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVF----DQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 265 KLEM 268
EM
Sbjct: 425 FREM 428
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EA V+E M K ++ Y + S C + A +V R++ + G SP +Y+A
Sbjct: 158 IEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDA 217
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
++ AG +E A+ ILR M E G+T ++ HVI L+ LG F M
Sbjct: 218 LVLGACRAGK-VEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMA--YA 274
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYF 168
K + DS ++ L L R EA + +EM+ RG DE F
Sbjct: 275 GKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGDELRQF 322
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLH-RGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
Y++LI LC +GR+ +A + +M + R G +P TY ++ + + +A+ +
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTP--STYHPILCSLTRKYKIEEAWRVVE 166
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
M K D + YN + +C G ++ A E+ R + E G SPD+ SY +
Sbjct: 167 SMRSKSVSMD--------VTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDAL 218
Query: 249 ISGLCK 254
+ G C+
Sbjct: 219 VLGACR 224
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 129 VTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHH 188
V++ LI G L A LF +M H D Y +M+ + G+ + A L
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPH----VKDVVIYNAMMDGFVKSGDMTSARRLFD 200
Query: 189 EMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQV 248
EM HK +++T+ +I+GYC++ + A ++F MPE L VS+ +
Sbjct: 201 EMTHK------------TVITWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTM 244
Query: 249 ISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYS 296
I G C+ ++P + L EM S L ++ T +++ +SD S
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTS-LDPDDVTILSVLPAISDTGALS 291
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 37/255 (14%)
Query: 23 YTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI---QTNAFAGTGIEVALEIL 79
+ +I F + +A+ +F EM+D G SP T AV+ ++ G E+ L
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 80 REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLC 139
R ++G+ + + L+ K G + ++ + + D+ D V+ LI
Sbjct: 579 RAGIDKGMD---------LGSALVNMYSKCG-SLKLARQVYDRLPELDPVSCSSLISGYS 628
Query: 140 WVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGF---- 195
G + + F LFR+M+ GF+ D +++ L E S +H + G
Sbjct: 629 QHGLIQDGFLLFRDMV-MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEP 687
Query: 196 ---------------LPDFVTGFS----PSLVTYNALIYGYCSLGRVQEALEIFRGMPEM 236
+ D FS P L+ + ALI Y G+ EAL+++ M E
Sbjct: 688 SVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK 747
Query: 237 GLSPDTVSYRQVISG 251
G PD V++ V+S
Sbjct: 748 GFKPDKVTFVGVLSA 762
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 199/520 (38%), Gaps = 93/520 (17%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A E+ +EM H G+ + T T +I + + S +A +V + GF LD+ A
Sbjct: 335 ALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF--YLDSSVAAAL 392
Query: 64 TNAFAGTG-IEVALEILREMPERGLTADAVSYCHVICALL--LPPEEKLGKAFEMKKDMD 120
+ ++ +G I+++ ++ ++ D + +++ ++ +K GKA + M
Sbjct: 393 ISMYSKSGDIDLSEQVFEDL-------DDIQRQNIVNVMITSFSQSKKPGKAIRLFTRML 445
Query: 121 DKGILPDSVTYEVLIDNL-CW-VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+G+ D + L+ L C +G+ + L + G D +L Y G
Sbjct: 446 QEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTLYSKCG 499
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+++ L + K + ++I G+ G ++EA+ +F M + G
Sbjct: 500 SLEESYKLFQGIPFK------------DNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 239 SPDTVSYRQVIS------GLCKIREPVKAYELKLEMDK-------------KRSCLSLNE 279
SPD + V++ L + +E + Y L+ +DK K L L
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 280 DTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNG--- 336
Y+ L E D + SSLI+ Y G ++ + L M G+ D+ +S +L
Sbjct: 607 QVYDRLPEL--DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 337 -------------LNKIARTTEAKWYLLWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLV 383
+ KI TE + FG I++C F ++
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS---------IDDCC-KAFSQIN 714
Query: 384 GP-AITFSVKVAIKAHHT-----------MLHGNYKPDGTVYNLLIFDHSRSLEVHKAYN 431
GP I ++ +A A H M +KPD + ++ S V ++Y
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 432 MYMEMVH-YGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
MV YG P + ++ AL GR E I+N
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINN 814
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTY-FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDF 199
V R EAF L+R+ML RG SPD+HT+ F L C + G FS+ +H ++V GF D
Sbjct: 128 VSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG-FSEGKQVHCQIVKHGFGGD- 185
Query: 200 VTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPV 259
+ N LI+ Y S G + A ++F MPE L VS+ +I L + E
Sbjct: 186 -------VYVNNGLIHLYGSCGCLDLARKVFDEMPERSL----VSWNSMIDALVRFGEYD 234
Query: 260 KAYELKLEMDK 270
A +L EM +
Sbjct: 235 SALQLFREMQR 245
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 129/305 (42%), Gaps = 26/305 (8%)
Query: 34 SRASKAVKVFREMIDRG-FSPSLDTYNAVIQTNAFAGTGIEVALEILREMPERGLTADAV 92
SR +A ++R+M++RG SP T+ V++ A+ G ++ ++ + G D
Sbjct: 129 SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI-FGFSEGKQVHCQIVKHGFGGDV- 186
Query: 93 SYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR 152
Y + L L A ++ +M ++ + V++ +ID L G A LFR
Sbjct: 187 -YVNNGLIHLYGSCGCLDLARKVFDEMPERSL----VSWNSMIDALVRFGEYDSALQLFR 241
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNA 212
EM + F PD +T ++++ G S H ++ K + + ++ N+
Sbjct: 242 EM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDV-----DVAMDVLVKNS 294
Query: 213 LIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKR 272
LI YC G ++ A ++F+GM + D S+ +I G +A M KR
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKR----DLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 273 SCLSLNEDTYETLMEQLS-------DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLS 325
+ N T+ L+ + + ++ DY + LE + ++ GY++
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 410
Query: 326 DNVTL 330
+ + +
Sbjct: 411 EAIDM 415
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 48/279 (17%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT---GIEVALEI 78
Y +I + +A+++ R M+ G TY +VI+ A AG G +V +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 79 LRE--------------------------MPERGLTADAVSYCHVICALLLPPEEKLGKA 112
LR + E+ D VS+ ++ + +G+A
Sbjct: 313 LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV--SSGHIGEA 370
Query: 113 FEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMN 172
+ K+M +K IL ++ ++I L G E LF M R GF P ++ + +
Sbjct: 371 KLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLFSCM-KREGFEPCDYAFSGAIK 425
Query: 173 CYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRG 232
+ G + H +++ GF SL NALI Y G V+EA ++FR
Sbjct: 426 SCAVLGAYCNGQQYHAQLLK--------IGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 233 MPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
MP + D+VS+ +I+ L + +A ++ EM KK
Sbjct: 478 MPCL----DSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 42/343 (12%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDT--YNAVIQTNAFAGTGIEVA 75
P + T ++ +C AS + + R + ++ DT YNA+I + G A
Sbjct: 78 PDKIARTTMVSGYC----ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS-A 132
Query: 76 LEILREMPERGLTADAVSYCHVICAL-LLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
+ + +M G D ++ V+ L L+ +EK F G + V
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVS 192
Query: 135 IDNLCWVGR--LSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVH 192
+ + C L A +F E+L + DE ++ +M Y G F L M
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEK-----DERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 193 KGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI--- 249
+ LV YNA+I GY + G QEALE+ R M G+ D +Y VI
Sbjct: 248 -----------NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 250 --SGLCKIREPVKAYELKLE---MDKKRSCLSL-----NEDTYETLMEQLSDED--TYSS 297
+GL ++ + V AY L+ E S +SL D + E++ +D ++++
Sbjct: 297 ATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNA 356
Query: 298 LINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLL-NGLNK 339
L++ Y++ G + +A + M LS + +S L NG +
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 77 EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLID 136
EI +M G T +AV L + + +A E+ + DK +PD V + +++
Sbjct: 186 EIFHKMRTEGFTNEAVKMFDA-----LSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 137 NLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFL 196
G+ E +F ML G SP+ +TY L+ G+ H+ K L
Sbjct: 241 AYANAGQAKETLKVFMRMLA-SGVSPNAYTYSVLIKGLAADGK-------THKDAKKYLL 292
Query: 197 PDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI 249
G SP+ TY A+ + G+ + A E+ + M G PD + R+ +
Sbjct: 293 EMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
EA E+ ++ K P +T ++ ++ +A + +KVF M+ G SP+ TY+ +I
Sbjct: 215 EALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLI 274
Query: 63 QTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDK 122
+ A G + A + L EM G++ +A +Y V A + E K A E+ ++M K
Sbjct: 275 KGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVR--EGKEESARELLQEMKGK 332
Query: 123 GILPD 127
G +PD
Sbjct: 333 GFVPD 337
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 41 KVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMPERGLTADAVSYCHVIC 99
++F +M GF T AV +A + G ALE+ ++ ++ D V++ ++
Sbjct: 186 EIFHKMRTEGF-----TNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 100 ALLLPPEEKLGKAFEMKK---DMDDKGILPDSVTYEVLIDNLCWVGRL-SEAFDLFREML 155
A G+A E K M G+ P++ TY VLI L G+ +A EM+
Sbjct: 241 AYA-----NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMM 295
Query: 156 HRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPD 198
G SP+ TY + + +G+ A L EM KGF+PD
Sbjct: 296 G-NGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 106/254 (41%), Gaps = 27/254 (10%)
Query: 15 GLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEV 74
GL H T LI + A KVF EM P+L +NAVI T F G +
Sbjct: 136 GLESHLFVGTTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVI-TACFRGNDVAG 190
Query: 75 ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVL 134
A EI +M R T+ V I A L +++ F DD V++ +
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRI---FSEMPHRDD-------VSWSTM 240
Query: 135 IDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKG 194
I + G +E+F FRE L R G SP+E + +++ G F LH G
Sbjct: 241 IVGIAHNGSFNESFLYFRE-LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILH------G 293
Query: 195 FLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
F+ G+S + NALI Y G V A +F GM E VS+ +I+GL
Sbjct: 294 FVEK--AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWTSMIAGLAM 348
Query: 255 IREPVKAYELKLEM 268
+ +A L EM
Sbjct: 349 HGQGEEAVRLFNEM 362
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 10 EMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAG 69
E + L P Y ++++ Q + A V +++ RG PS TY +++ A
Sbjct: 583 EKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEV-MLAC 641
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSV 129
+ E R+M ++ +A++Y ++ L E K +A +DM+ +GI+ +
Sbjct: 642 EKYNLVHEFFRKM-QKSSIPNALAYRVLVNTLW--KEGKSDEAVHTVEDMESRGIVGSAA 698
Query: 130 TYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHE 189
Y L LC GR +E ++ +++ R P TY L+ G A ++ +
Sbjct: 699 LYYDLARCLCSAGRCNEGLNMLKKIC-RVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQ 757
Query: 190 MVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
M SP+LVT N ++ Y G +EA E+F+ M E G
Sbjct: 758 MKK---------VCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDG 796
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 148/345 (42%), Gaps = 44/345 (12%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGI-EVALEILR 80
++T +I F + A K F DR S+ ++NA++ + +A G E AL +
Sbjct: 200 SWTVMITGFAKVKDLENARKYF----DRMPEKSVVSWNAML--SGYAQNGFTEDALRLFN 253
Query: 81 EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCW 140
+M G+ + ++ VI A + L ++ + K +D+K + + L+D
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRS--LVKLIDEKRVRLNCFVKTALLDMHAK 311
Query: 141 VGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFV 200
+ A +F E+ G + T+ +++ Y G+ S A L M +
Sbjct: 312 CRDIQSARRIFNEL----GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR------- 360
Query: 201 TGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLS-PDTVSYRQVIS--------- 250
++V++N+LI GY G+ A+E F M + G S PD V+ V+S
Sbjct: 361 -----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 251 -GLCKIREPVKAYELKLEMDKKRSCLSL-----NEDTYETLMEQLSDED--TYSSLINDY 302
G C I + ++ ++KL RS + + N + + +++ + D +Y++L +
Sbjct: 416 LGDC-IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 303 LAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
A GD + L M +G D VT + +L N+ E +
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 42/192 (21%)
Query: 16 LTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT----NAF---- 67
+ P E TY +I FC +A K++ M+D GF ++ +++T N F
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 68 ---------------------------AGTGIEVALEILREMPERGLTADAVSYCHVICA 100
I++A ++ EM ERG+ D +++ +I
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 101 LLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGF 160
LL+ + ++ +A+ + + +++ PD Y LI L + R SEA ++FR+M+ RG
Sbjct: 331 LLV--KRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGC- 383
Query: 161 SPDEHTYFNLMN 172
P HTY L+
Sbjct: 384 EPIMHTYLMLLQ 395
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKA 183
I PD +TY +I C VG L EA L+ M+ G F D +M + +F +A
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEG-FDVDIEAGKKIMETLLKKNQFDEA 269
Query: 184 FHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTV 243
+ + MV K D GF Y +I C GR+ A ++F M E G+ D +
Sbjct: 270 SKVFYVMVSKRG-GDLDGGF------YRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNL 322
Query: 244 SYRQVISGLCKIREPVKAYEL 264
++ +I GL R V+AY L
Sbjct: 323 TWASLIYGLLVKRRVVEAYGL 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 18/269 (6%)
Query: 6 EVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTN 65
E+ +E+ +GL +++T+ ++ + K V F M G+ +++T N ++T
Sbjct: 133 ELAQEIGKRGLV-NDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETL 191
Query: 66 AFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGIL 125
+E A + ++ E + D ++Y +I + L +A ++ M D+G
Sbjct: 192 CKEKL-VEEAKFVFIKLKE-FIKPDEITYRTMIQGFCDVGD--LIEAAKLWNLMMDEGFD 247
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
D + +++ L + EA +F M+ + G D Y +++ C G A
Sbjct: 248 VDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARK 307
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
+ EM +G D +T + +LIYG RV EA + G+ +PD Y
Sbjct: 308 VFDEMRERGVYVDNLT--------WASLIYGLLVKRRVVEAYGLVEGVE----NPDISIY 355
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSC 274
+I GL KI+ +A E+ +M +R C
Sbjct: 356 HGLIKGLVKIKRASEATEVFRKMI-QRGC 383
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 135/357 (37%), Gaps = 68/357 (19%)
Query: 18 PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT--------NAFAG 69
P +TYT L + +A +F M+ G P++D Y ++I AF+
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS- 200
Query: 70 TGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK----DMDDKGIL 125
LE ++ + + D ++ +I KLG+ F++ K +M G+
Sbjct: 201 -----TLEYMKSVSD--CKPDVFTFTVLISCCC-----KLGR-FDLVKSIVLEMSYLGVG 247
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
+VTY +ID G E + +M+ G PD T +++ Y K
Sbjct: 248 CSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMES 307
Query: 186 LHHEMVHKGFLPDFVTG---------------------------FSPSLVTYNALIYGYC 218
+ G PD T FS + VTYN +I +
Sbjct: 308 WYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFG 367
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLN 278
GR+++ ++FR M G+ P++++Y +++ K VK + ++ +N
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI--------VN 419
Query: 279 EDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLN 335
D + D ++ +IN Y GDL +L M D +T + ++
Sbjct: 420 SDV-------VLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIK 469
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 120/310 (38%), Gaps = 53/310 (17%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ A+ V EM + + +YT +I + +E A +AVK+F EM + G SP + T A
Sbjct: 347 LDSAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
V+ A ++ + + E L D + L+ K G E +
Sbjct: 403 VLNCCARYRL-LDEGKRVHEWIKENDLGFDI-----FVSNALMDMYAKCGSMQEAELVFS 456
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
+ + D +++ +I +EA LF +L FSPDE T ++ F
Sbjct: 457 EMRV-KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 181 SKAFHLHHEMVHKGFLPD-----------------------FVTGFSPSLVTYNALIYGY 217
K +H ++ G+ D F S LV++ +I GY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 218 CSLGRVQEALEIFRGMPEMGLSPDTVSYRQVI-----SGL--------------CKIREP 258
G +EA+ +F M + G+ D +S+ ++ SGL CKI
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 259 VKAYELKLEM 268
V+ Y ++M
Sbjct: 636 VEHYACIVDM 645
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 123 GILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSK 182
GI D+V++ + I + C +G L A+ REM + G +PD TY L++
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREM-EKSGLTPDVVTYTTLIS---------- 220
Query: 183 AFHLHHEMVHKGFLPDFVT--GFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSP 240
A + H V L + + G P+L T+N I + R +A ++ MP++ + P
Sbjct: 221 ALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 241 DTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLIN 300
D+++Y VI G R P A +R +++ Y+ ++ Y ++I+
Sbjct: 281 DSITYNMVIKGFFLARFPDMA---------ERVYTAMHGKGYKPNLK------IYQTMIH 325
Query: 301 DYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAK 347
G+ + AY + + + T+ +LL GL K + +AK
Sbjct: 326 YLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 5/191 (2%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNA 66
+ EM GLTP TYT LI + + R ++ M+ +G P+L T+N IQ
Sbjct: 199 AMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLV 258
Query: 67 FAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
+ A ++L MP+ + D+++Y VI L + + + M KG P
Sbjct: 259 NRRRAWD-ANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAE--RVYTAMHGKGYKP 315
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
+ Y+ +I LC G A+ + ++ + R + P+ T L+ +G+ +A +
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYTMCKDCM-RKKWYPNLDTVEMLLKGLVKKGQLDQAKSI 374
Query: 187 HHEMVHKGFLP 197
E+VH+ P
Sbjct: 375 -MELVHRRVPP 384
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
+ +L+E+ +G + Y ++ ++C+E R S+A ++ E+ G ++TYN +I+
Sbjct: 351 GKSILDELNAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIE 410
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
+ + AL + R+M E + Y ++ LL +L F +++ M+D
Sbjct: 411 ASMTKHDFLS-ALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEF-VEEVMEDPR 468
Query: 124 ILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCY 174
+ S + +I C GRL +A FR M + P+ TY +L+N Y
Sbjct: 469 VEVKSHDWNSIIHAFCKSGRLGDAKSTFRRMTFL-QYEPNNQTYLSLINGY 518
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 102/253 (40%), Gaps = 34/253 (13%)
Query: 4 AEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQ 63
A+ V + M K + ++T ++ + Q RA +AVK+F +M G P T I
Sbjct: 324 AKTVFDRMKQKNVV----SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 64 TNAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
A + LE + + +T+ + Y V +L+ GK D+DD
Sbjct: 380 ACANVSS-----LEEGSQFHGKAITSGLIHYVTVSNSLV----TLYGKC----GDIDDST 426
Query: 124 IL------PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
L D+V++ ++ GR E LF +M+ G PD T +++
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRA 485
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
G K M + G PS+ Y+ +I + GR++EA+ GMP
Sbjct: 486 GLVEKGQRYFKLMTSE-------YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP--- 535
Query: 238 LSPDTVSYRQVIS 250
PD + + ++S
Sbjct: 536 FPPDAIGWTTLLS 548
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 100/272 (36%), Gaps = 47/272 (17%)
Query: 14 KGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGT--- 70
+G+ ++ +I Q A +A++ FREM +G + +V+ G
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 71 GIEVALEILREMPERGLTADAV---SYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPD 127
G ++ I+R + + + YC C K + D+ +
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKC-------------LHYAKTVFDRMKQKN 335
Query: 128 SVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLH 187
V++ ++ GR EA +F +M R G PD +T ++ + H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 188 HEMVHKGFLPDFVTGFSPSLVT-------------------------YNALIYGYCSLGR 222
+ + G + +VT S SLVT + A++ Y GR
Sbjct: 395 GKAITSGLI-HYVT-VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 223 VQEALEIFRGMPEMGLSPDTVSYRQVISGLCK 254
E +++F M + GL PD V+ VIS +
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 40/268 (14%)
Query: 122 KGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFS 181
+G+ DSV++ +I L G EA + FREM +G D++ + +++ G +
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAIN 287
Query: 182 KAFHLHHEMVHKGFLPDFVTGFS-----------------------PSLVTYNALIYGYC 218
+ +H ++ F G + ++V++ A++ GY
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 219 SLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK------- 271
GR +EA++IF M G+ PD + Q IS + + + +
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 272 ---------RSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYVMGHDG 322
C +++ T + D +++++++ Y G + QL M G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 323 YLSDNVTLSVLLNGLNKIARTTEAKWYL 350
D VTL+ +++ ++ + + Y
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYF 495
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 106/266 (39%), Gaps = 55/266 (20%)
Query: 22 TYTCLIHSFCQESRASKAVKVFREMIDR--GFSPSLDTYNAVIQTNAFAG-TGIEVALEI 78
+ LI C+ + +A+KVF +M D P D +V TNA AG + L++
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV--TNACAGLEALRFGLQV 498
Query: 79 LREMPERGLTADAVSYCHVI-----CALLLPPEEKLGKAF-------------------- 113
M + GL + +I C L PE L K F
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGL---PEMAL-KVFTSMSTENMVAWNSMISCYSR 554
Query: 114 ----EMKKD----MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEH 165
E+ D M +GI PDSV+ ++ + L + L L R G D H
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL-RLGIPSDTH 613
Query: 166 TYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQE 225
L++ Y G A ++ +M HK SL+T+N +IYGY S G
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKMQHK------------SLITWNLMIYGYGSHGDCIT 661
Query: 226 ALEIFRGMPEMGLSPDTVSYRQVISG 251
AL +F M + G SPD V++ +IS
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISA 687
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 15/276 (5%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFRE-MIDRGFSP-SLDTY 58
++ A ++L+ + K + + L+ + + + + +VFRE +I G P S D Y
Sbjct: 86 LSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCY 145
Query: 59 NAVIQTNAFAGTGIEVAL-EILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK 117
+ + AF T L +L+E+ E L + +I A ++ K + K
Sbjct: 146 LNLAR--AFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAF--AETRQIDKVLMILK 201
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQ 177
+M + PD +TY ++D L G ++E + M S + TY ++N
Sbjct: 202 EMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKA 261
Query: 178 GEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMG 237
F +++EMV G PD L++Y A+I G V+E+L +F M +
Sbjct: 262 CRFDMCLVIYNEMVQCGIEPD--------LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQ 313
Query: 238 LSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
+ P YR +I L K + A +L E+ S
Sbjct: 314 IRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSS 349
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 152/369 (41%), Gaps = 65/369 (17%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+AE+V EEM + + ++ +I + ++ +F+EM+ GF P D ++ +
Sbjct: 183 DAEKVFEEMPERDIV----SWNSMISGYLALGDGFSSLMLFKEMLKCGFKP--DRFSTMS 236
Query: 63 QTNAFA-----GTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKK 117
A + G E+ +R E G ++ +L K G+ ++
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDV--------MVMTSILDMYSKYGEVSYAER 288
Query: 118 DMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYC-L 176
+ I + V + V+I GR+++AF F++M + G PD T NL+ L
Sbjct: 289 IFNGM-IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFS-----------------------PSLVTYNAL 213
+G +H + +GFLP V + +++++N++
Sbjct: 348 EGR-----TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSI 402
Query: 214 IYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRS 273
I Y G+ ALE+F+ + + L PD+ + ++ AY L + + R
Sbjct: 403 IAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL----------PAYAESLSLSEGRE 452
Query: 274 CLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQ-LDYVMGHDGYLSDNVTLSV 332
Y S+ +SL++ Y GDLE A + ++++ D +++ ++
Sbjct: 453 I-----HAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAY 507
Query: 333 LLNGLNKIA 341
++G +I+
Sbjct: 508 AVHGFGRIS 516
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 29/269 (10%)
Query: 7 VLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGF--SPSLDTYNAVIQT 64
+L E++ G P +Y I + R +A +F E++ S S+ YNA++
Sbjct: 3 LLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALVSR 62
Query: 65 NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGI 124
EV+ ++ EM +R ++ Y +I + KA + +++ + G+
Sbjct: 63 YLRK----EVSWRVVNEMKKRKFRLNSFVYGKII--RIYRDNGMWKKALGIVEEIREIGL 116
Query: 125 LPDSVTYEVLIDNLCWVGRLSE--AFDLFREM------LHRGGFSPDEHTYFNLMNCYCL 176
D Y +ID G L E F F ++ L G +P + + L N Y
Sbjct: 117 PMDVEIYNSVIDTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQ 176
Query: 177 QGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPE- 235
QG + + M ++G P+L+ N LI + + G+ EAL I+ + E
Sbjct: 177 QGLCKQTVKVLKMMENEGI--------EPNLIMLNVLINAFGTAGKHMEALSIYHHIKET 228
Query: 236 MGLSPDTVSYRQVISGLCKIREPVKAYEL 264
+ + PD V+Y S L K K YE+
Sbjct: 229 VWIHPDVVTY----STLMKAFTRAKKYEM 253
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 73 EVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYE 132
E A ++ E PER L S+ +I L + +A EM DM G+ PD T
Sbjct: 169 ENARKVFDENPERKLG----SWNAIIGGL--NHAGRANEAVEMFVDMKRSGLEPDDFTMV 222
Query: 133 VLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFN-LMNCYCLQGEFSKAFHLHHEMV 191
+ + +G LS AF L + +L + N L++ Y G A H+ EM
Sbjct: 223 SVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR 282
Query: 192 HKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISG 251
+ ++V+++++I GY + G EALE FR M E G+ P+ +++ V+S
Sbjct: 283 QR------------NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 102/261 (39%), Gaps = 39/261 (14%)
Query: 112 AFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLH----RGGFSPDEHTY 167
A ++ M +LPD + ++I + F L +E LH R GF DE
Sbjct: 101 AIQVYLGMVRSTVLPDRYSLPIVIKAAVQI----HDFTLGKE-LHSVAVRLGFVGDEFCE 155
Query: 168 FNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEAL 227
+ YC GEF A + E + L ++NA+I G GR EA+
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPER------------KLGSWNAIIGGLNHAGRANEAV 203
Query: 228 EIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYE-----LKLEMDKKRSCLSLNE--- 279
E+F M GL PD + V + + + A++ L+ + ++K + LN
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 280 --------DTYETLMEQLSDED--TYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVT 329
D + E++ + ++SS+I Y A G+ +A + M G + +T
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 330 LSVLLNGLNKIARTTEAKWYL 350
+L+ E K Y
Sbjct: 324 FVGVLSACVHGGLVEEGKTYF 344
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 116/294 (39%), Gaps = 70/294 (23%)
Query: 3 EAEEVLEEMYHKGLT-PHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAV 61
EA +V M GL P+E T+ ++ + + SR S +++ ++ GF S+ N++
Sbjct: 163 EALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSL 222
Query: 62 IQT-NAFAGTGIEVALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD 120
+ + +G+ + L++ E+P+R
Sbjct: 223 MSLYDKDSGSSCDDVLKLFDEIPQR----------------------------------- 247
Query: 121 DKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEF 180
D ++ ++ +L G+ +AFDLF EM GF D T L++
Sbjct: 248 ------DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVL 301
Query: 181 SKAFHLHHEMVHKGFLPDF-----VTGF------------------SPSLVTYNALIYGY 217
+ LH + G + + + GF + VT+ +I Y
Sbjct: 302 LRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAY 361
Query: 218 CSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELKLEMDKK 271
S G V A+EIF + E +T++Y +++G C+ +KA +L +M ++
Sbjct: 362 MSFGMVDSAVEIFANVTE----KNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 126 PDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFH 185
P V+Y LI + EA +F M G P+E+T+ ++ FS
Sbjct: 143 PTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
Query: 186 LHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSY 245
+H +V GFL S SL++ +Y S + L++F +P+ D S+
Sbjct: 203 IHGLIVKSGFLNSVFV--SNSLMS----LYDKDSGSSCDDVLKLFDEIPQR----DVASW 252
Query: 246 RQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSD 291
V+S L K + KA++L EM++ ++ T TL+ +D
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEG-FGVDSFTLSTLLSSCTD 297
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 48/342 (14%)
Query: 8 LEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAF 67
M L P T+ L+ + R S + + ++++ GFS D Y + N +
Sbjct: 34 FSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSS--DFYISSSLVNLY 91
Query: 68 AGTGIEV-ALEILREMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILP 126
A G+ A ++ EM ER D V + +I +G+A + +M +GI P
Sbjct: 92 AKFGLLAHARKVFEEMRER----DVVHWTAMIGCY--SRAGIVGEACSLVNEMRFQGIKP 145
Query: 127 DSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHL 186
VT ++ + + +L D +++ GF D +++N YC A L
Sbjct: 146 GPVTLLEMLSGVLEITQLQCLHDF--AVIY--GFDCDIAVMNSMLNLYCKCDHVGDAKDL 201
Query: 187 HHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYR 246
+M + +V++N +I GY S+G + E L++ M GL PD ++
Sbjct: 202 FDQMEQR------------DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 247 QVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTY--SSLINDYLA 304
+S V LEM + C +++ D D + ++LI YL
Sbjct: 250 ASLS--------VSGTMCDLEMGRMLHC---------QIVKTGFDVDMHLKTALITMYLK 292
Query: 305 QGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEA 346
G E +Y++ + + D V +V+++GL ++ R +A
Sbjct: 293 CGKEEASYRVLETIPN----KDVVCWTVMISGLMRLGRAEKA 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 3 EAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVI 62
+A+++ ++M + + ++ +I + S+ +K+ M G P T+ A +
Sbjct: 197 DAKDLFDQMEQRDMV----SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASL 252
Query: 63 QTNAFAGTGIEVALEILR----EMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKD 118
+G LE+ R ++ + G D +I L +E+ ++ + +
Sbjct: 253 SV-----SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE--ASYRVLET 305
Query: 119 MDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+ +K D V + V+I L +GR +A +F EML G E + +C L G
Sbjct: 306 IPNK----DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL-G 360
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
F +H ++ G+ D +P+L N+LI Y G + ++L IF M E
Sbjct: 361 SFDLGASVHGYVLRHGYTLD-----TPAL---NSLITMYAKCGHLDKSLVIFERMNE--- 409
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLS 290
D VS+ +ISG + + KA L EM K ++ ++ T +L++ S
Sbjct: 410 -RDLVSWNAIISGYAQNVDLCKALLLFEEM-KFKTVQQVDSFTVVSLLQACS 459
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 184/491 (37%), Gaps = 98/491 (19%)
Query: 17 TPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTGIEVAL 76
+P E + LIH+ C+++ + + V +++ RG S V ++ + +L
Sbjct: 26 SPDESHFISLIHA-CKDTASLRHVHA--QILRRGVLSSRVAAQLVSCSSLLKSP--DYSL 80
Query: 77 EILREMPER----------GLTADA---VSYCHVICALLLPPEEKLGKAFEMKKDMDDKG 123
I R ER GLT +A S H I L L G
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRL-------------------G 121
Query: 124 ILPDSVTYEVLIDN-----LCWVGRLSEAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQG 178
+ PD +T+ ++ + W+GR A L + D +L++ Y G
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATL------KNFVDCDSFVRLSLVDMYAKTG 175
Query: 179 EFSKAFHLHHEMVHKGFLPDFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGL 238
+ AF + E PD + S++ +N LI GYC + A +FR MPE
Sbjct: 176 QLKHAFQVFEES------PDRIK--KESILIWNVLINGYCRAKDMHMATTLFRSMPER-- 225
Query: 239 SPDTVSYRQVISGLCKIREPVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSL 298
++ S+ +I G E +A +L E+ +++ +S +++L
Sbjct: 226 --NSGSWSTLIKGYVDSGELNRAKQL-FELMPEKNVVS------------------WTTL 264
Query: 299 INDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNK---IARTTEAKWYLL--WT 353
IN + GD E A + M G + T++ +L+ +K + Y+L
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 354 VFFRCFGMPAYIIYDTLIE-NCSNNEFKRL------------VGPAITFSVKVAIKAHHT 400
R G +Y E +C+ F + G A+ AI+
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQ 384
Query: 401 MLHGNYKPDGTVYNLLIFDHSRSLEVHKAYNMYMEM-VHYGFVPHMFSVLALIKALHYDG 459
M++ KPD V+ ++ S EV N + M + Y P + + ++ L G
Sbjct: 385 MMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAG 444
Query: 460 RYNEMSWVIHN 470
+ NE ++ N
Sbjct: 445 KLNEAHELVEN 455
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 154/343 (44%), Gaps = 62/343 (18%)
Query: 27 IHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQTNAFAGTG-IEVALEILREMPER 85
I + +A +FR+M +R S+ ++ A+I +A+A G + A ++ EMP R
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR----SIVSWIAMI--SAYAENGKMSKAWQVFDEMPVR 110
Query: 86 GLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLS 145
T SY +I A++ + LGKA+E+ D+ +K ++V+Y +I GR
Sbjct: 111 VTT----SYNAMITAMI-KNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFD 161
Query: 146 EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLPDFVTGFSP 205
EA L+ E + S + L++ Y G++++A + M K
Sbjct: 162 EAEFLYAETPVKFRDSVASNV---LLSGYLRAGKWNEAVRVFQGMAVK------------ 206
Query: 206 SLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIREPVKAYELK 265
+V+ +++++GYC +GR+ +A +F M E + +++ +I G K + L
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 266 LEMDKKRSCLSLNEDTYETLMEQLSDEDTY--SSLINDYLAQGDLEKAYQLDYVMGHD-- 321
L M ++ + +N +T + + D Y S I+ +++ LE D +G+
Sbjct: 263 LRM-RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE----FDLFLGNSLM 317
Query: 322 ------GYLS------------DNVTLSVLLNGLNKIARTTEA 346
GY+ D+V+ + L+ GL + + +EA
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEA 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 111/544 (20%), Positives = 213/544 (39%), Gaps = 112/544 (20%)
Query: 1 MTEAEEVLEEMYHKGLTPHERTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNA 60
+ EAE + +M ++ + ++ +I ++ + + SKA +VF EM R +YNA
Sbjct: 66 LQEAEAIFRQMSNRSIV----SWIAMISAYAENGKMSKAWQVFDEMPVR----VTTSYNA 117
Query: 61 VIQTNAFAGTGIEVALEILREMPERGLTADAVSYCHVICA-------------------- 100
+I + A E+ ++PE+ +AVSY +I
Sbjct: 118 MITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 101 --------LLLPPEEKLGKAFEMKKDMDDKGILPDSVTYEVLIDNLCWVGRLSEAFDLFR 152
+LL + GK E + + + V+ ++ C +GR+ +A LF
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV-KEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 153 EMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP--------------D 198
M R + T+ +++ Y G F F L M +G + D
Sbjct: 233 RMTER-----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 199 FVTGFSPS--------------LVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVS 244
FV S L N+L+ Y LG + EA +F M + D+VS
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK----NKDSVS 343
Query: 245 YRQVISGLCKIREPVKAYELKLEMDKK--------------RSCLSLNEDTYETLMEQLS 290
+ +I+GL + ++ +AYEL +M K + +S + + + E+
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK-- 401
Query: 291 DEDTYSSLINDYLAQGDLEKAYQLDYVMGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYL 350
D T++++I+ +++ G E+A + M ++ T S +L+ +A E
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG---- 457
Query: 351 LWTVFFRCFGMPAYIIYDTLIENCSNNEFKRLVGPAITFSVKVAIKAHHTMLHGNYKPDG 410
+ R M I+ D ++N + + + + + I +P+
Sbjct: 458 -LQIHGRVVKMN--IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----------EPNI 504
Query: 411 TVYNLLIFDHSRSLEVHKAYNMYMEMVHYGFVPHMFSVLALIKALHYDGRYNEMSWVIHN 470
YN +I +S + KA ++ + G P+ + LAL+ A + G Y ++ W
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG-YVDLGWKYFK 563
Query: 471 TLRS 474
+++S
Sbjct: 564 SMKS 567
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 154/345 (44%), Gaps = 34/345 (9%)
Query: 21 RTYTCLIHSFCQESRASKAVKVFREMIDRGFSPSLDTYNAVIQT-NAFAGTGIEVALEIL 79
R + +I + + S+ V+VF M + +D + N +E+A +
Sbjct: 140 RFFNSMIMVYSDNGKFSEVVEVFEYM--KNNEVKIDEKTCTLHLLNLKRCDQMELARDFF 197
Query: 80 REMPERGLTADAVSYCHVICALLLPPEEKLGKAFEMKKDMD-DKGILPDSVTYEVLIDNL 138
M E G+ V Y + +L ++ +A E+ ++M KG+ + VT++ +I
Sbjct: 198 SLMVESGIDVVTV-YSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIG-- 254
Query: 139 CWVGRLS-EAFDLFREMLHRGGFSPDEHTYFNLMNCYCLQGEFSKAFHLHHEMVHKGFLP 197
C V R E DL +++ + D +Y L++ + G+ +A L M+H L
Sbjct: 255 CCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVL-MMHDKKLR 313
Query: 198 DFVTGFSPSLVTYNALIYGYCSLGRVQEALEIFRGMPEMGLSPDTVSYRQVISGLCKIRE 257
V + YN ++ GY G V++ +E++ M G++P+ +Y +++GLCK +
Sbjct: 314 --VESY-----LYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 258 PVKAYELKLEMDKKRSCLSLNEDTYETLMEQLSDEDTYSSLINDYLAQGDLEKAYQLDYV 317
+A E L +NE +E DE+ YS+L + G ++K+ ++
Sbjct: 367 VCEAMSFLNE-------LRVNE--FEI------DEEMYSTLSEECYRVGMIDKSLEVVAE 411
Query: 318 MGHDGYLSDNVTLSVLLNGLNKIARTTEAKWYLLWTVFFRCFGMP 362
M DG++ L + L ++ R EA+ +L T+ +C P
Sbjct: 412 MIRDGFIPGATICERLADSLFEVNR-KEAQ--MLITIVVKCGIKP 453