Miyakogusa Predicted Gene

Lj5g3v0104720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0104720.1 Non Chatacterized Hit- tr|I1M8C6|I1M8C6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.82,0,Flavoproteins,NULL; Radical SAM enzymes,NULL;
Radical_SAM,Radical SAM; Wyosine_form,tRNA wybutosine-,CUFF.52521.1
         (726 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75200.1 | Symbols:  | flavodoxin family protein / radical SA...   878   0.0  
AT3G02280.1 | Symbols:  | Flavodoxin family protein | chr3:45364...    52   2e-06

>AT1G75200.1 | Symbols:  | flavodoxin family protein / radical SAM
           domain-containing protein | chr1:28220849-28223597
           REVERSE LENGTH=647
          Length = 647

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/644 (67%), Positives = 481/644 (74%), Gaps = 11/644 (1%)

Query: 91  SLSSLPARLTLVALFSATTFYCXXXXXXXXXXXXXXX--XXXXXXXXXXXXFLSQTGTSK 148
           + SS+  RL  VAL SATTFYC                             F+SQTGT+K
Sbjct: 3   TTSSVRVRLAFVALLSATTFYCIHKYRRLKHLKNLSLNPSSTLKASRGKIFFISQTGTAK 62

Query: 149 TLAQRLHSFLASNGVVFELLDARSYEPEDLPKETLLLLVASTWEDGKPPPESRFFANWLA 208
            LAQRLH   ASN + F+++D  SYEPEDLPKETL+L +ASTW+ GKPP    F  NWL 
Sbjct: 63  ALAQRLHELCASNDIAFDIVDPHSYEPEDLPKETLVLFIASTWDGGKPPKNGEFLVNWLG 122

Query: 209 ESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGAAXXXXXXXXXXX 268
           ESAEDFRVGSLLLS  +FAVFGVGS AYG+S+NAVA++L  RM  LG             
Sbjct: 123 ESAEDFRVGSLLLSDCKFAVFGVGSRAYGESYNAVAKELSSRMIGLGGLEMIPVGEGDVD 182

Query: 269 XXXXXXXXXRWCAXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXPDI 322
                     WC                                               I
Sbjct: 183 DGELDRAFQDWCDGVIRVLKGGSAQETNGVSQQIGAVEDDLEYYDSTDEEDEDNDADGGI 242

Query: 323 VDLEDIAGKAPSRKSGAKVEETNGKLNGKKEMVTPVIRANLVKQGYKIIGSHSGVKICRW 382
           VDLEDIAGKAPS+++G  V+ T  K++GKKEMVTPVIRA+L KQGYKIIGSHSGVKICRW
Sbjct: 243 VDLEDIAGKAPSKRNGV-VKVT--KVDGKKEMVTPVIRASLTKQGYKIIGSHSGVKICRW 299

Query: 383 TKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWQWEMDDPI 442
           TKSQLRGRGGCYKHSFYGIESHRCME TPSLACANKCVFCWRHHTNPV KSWQW+MD+P 
Sbjct: 300 TKSQLRGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGKSWQWKMDEPS 359

Query: 443 EIVNSALDQHRNMVKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMYPEINALVDELHK 502
            IV  ALD H+NM+KQMKGVPGVT E+L EGL+PRHCALSLVGEPIMYPEINALVDELH 
Sbjct: 360 VIVKGALDLHKNMIKQMKGVPGVTPEKLQEGLNPRHCALSLVGEPIMYPEINALVDELHG 419

Query: 503 KRISTFLVTNAQFPDKIKSLKPITQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTAL 562
           +RISTFLVTNAQFP+KI  +KPITQLYVSVDAATK+SLKAIDRPLF DFWERFIDSL AL
Sbjct: 420 RRISTFLVTNAQFPEKILMMKPITQLYVSVDAATKESLKAIDRPLFADFWERFIDSLKAL 479

Query: 563 KEKHQRTVYRLTLVKGWNTEEVDAYSKFFSMGEPDFIEIKGVTYCGSTATSKLTMENVPW 622
           +EK QRTVYRLTLVKGWNTEE+DAY   FS+G+PDFIEIKGVTYCGS+ATSKLTMENVPW
Sbjct: 480 QEKQQRTVYRLTLVKGWNTEELDAYFNLFSIGKPDFIEIKGVTYCGSSATSKLTMENVPW 539

Query: 623 HADVKAFSEALALKSQGEYEVACEHVHSCCVLLAKTKKFKIDGQWYTWIDYEKFHDLVAS 682
           H DVKAFSEAL+LKS GEYEVACEH HSCCVLL +T+KFK+DG+W+TWIDYEKFHDLVAS
Sbjct: 540 HTDVKAFSEALSLKSNGEYEVACEHAHSCCVLLGRTEKFKVDGKWFTWIDYEKFHDLVAS 599

Query: 683 GETFDSKDYMAVTPSWAVYGSEEGGFDPGQLRYRKERHHKSKPQ 726
           GE F S DYMA TPSWAVYG++EGGFDPGQLRY+KER+H  KPQ
Sbjct: 600 GEPFTSTDYMAQTPSWAVYGAQEGGFDPGQLRYKKERNHPPKPQ 643


>AT3G02280.1 | Symbols:  | Flavodoxin family protein |
           chr3:453646-457659 FORWARD LENGTH=623
          Length = 623

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 6/118 (5%)

Query: 140 FLSQTGTSKTLAQRLHSFLASNGVVFELLDARSYEPEDLPK-ETLLLLVASTWEDGKPPP 198
           + SQTG +   A+R+       G+   ++    ++   LP  E  ++ V ST   G  P 
Sbjct: 12  YASQTGNALDAAERIGREAERRGLPASVVSTDEFDTSSLPHHEEAVVFVVSTTGQGDSPD 71

Query: 199 ESRFFANWLAESAEDFRVGSLLLSRLRFAVFGVGSGAYGDSFNAVARDLVKRMRELGA 256
             + F  +L +      +G+  L ++R+AVFG+G   Y   +N VA+ L KR+ +LGA
Sbjct: 72  SFKAFWRFLLQR----NLGNYWLQQVRYAVFGLGDSGY-QKYNFVAKKLDKRLSDLGA 124