Miyakogusa Predicted Gene

Lj5g3v0088440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0088440.1 Non Chatacterized Hit- tr|I1LZF8|I1LZF8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,63.44,3e-16,PSK,Phytosulfokine; seg,NULL,CUFF.52506.1
         (92 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G44735.2 | Symbols: PSK3 | PHYTOSULFOKINE 3 PRECURSOR | chr3:...    54   2e-08
AT3G44735.1 | Symbols: PSK1, ATPSK3, PSK3 | PHYTOSULFOKINE 3 PRE...    54   2e-08

>AT3G44735.2 | Symbols: PSK3 | PHYTOSULFOKINE 3 PRECURSOR |
          chr3:16291388-16292118 REVERSE LENGTH=81
          Length = 81

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 25 VAPEGPRKGEKEVKVDDNAITLSYAESKDDMEELKGSEACYEEDQECSSRRMIAEAHLDY 84
           +    R+G+++ ++  N +  + +  +D + +L G E C E D+EC  RRM+ E+HLDY
Sbjct: 16 TSSSAIRRGKEDQEI--NPLVSATSVEEDSVNKLMGMEYCGEGDEECLRRRMMTESHLDY 73

Query: 85 IYTQHYK 91
          IYTQH+K
Sbjct: 74 IYTQHHK 80


>AT3G44735.1 | Symbols: PSK1, ATPSK3, PSK3 | PHYTOSULFOKINE 3
          PRECURSOR | chr3:16291388-16292118 REVERSE LENGTH=81
          Length = 81

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 25 VAPEGPRKGEKEVKVDDNAITLSYAESKDDMEELKGSEACYEEDQECSSRRMIAEAHLDY 84
           +    R+G+++ ++  N +  + +  +D + +L G E C E D+EC  RRM+ E+HLDY
Sbjct: 16 TSSSAIRRGKEDQEI--NPLVSATSVEEDSVNKLMGMEYCGEGDEECLRRRMMTESHLDY 73

Query: 85 IYTQHYK 91
          IYTQH+K
Sbjct: 74 IYTQHHK 80