Miyakogusa Predicted Gene

Lj5g3v0087400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0087400.1 Non Chatacterized Hit- tr|Q650V5|Q650V5_ORYSJ
Putative KIAA protein OS=Oryza sativa subsp. japonica
,54.64,8e-18,seg,NULL,NODE_67294_length_463_cov_61.784016.path1.1
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36480.1 | Symbols:  | ENTH/VHS family protein | chr2:1530311...    89   6e-19
AT2G36480.2 | Symbols:  | ENTH/VHS family protein | chr2:1530256...    89   7e-19
AT2G36480.3 | Symbols:  | ENTH/VHS family protein | chr2:1530256...    89   7e-19
AT4G04885.1 | Symbols: PCFS4 | PCF11P-similar protein 4 | chr4:2...    47   2e-06

>AT2G36480.1 | Symbols:  | ENTH/VHS family protein |
           chr2:15303114-15306274 REVERSE LENGTH=830
          Length = 830

 Score = 89.0 bits (219), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 46/74 (62%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           MRHLFGTW+GVF  QTLQ IEKELGF    +G                    IHVNPKYL
Sbjct: 53  MRHLFGTWKGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRPPHSIHVNPKYL 112

Query: 61  ERQRLQQSSRTKGV 74
           ERQRLQQS RTKG+
Sbjct: 113 ERQRLQQSGRTKGM 126


>AT2G36480.2 | Symbols:  | ENTH/VHS family protein |
           chr2:15302567-15306274 REVERSE LENGTH=844
          Length = 844

 Score = 89.0 bits (219), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 46/74 (62%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           MRHLFGTW+GVF  QTLQ IEKELGF    +G                    IHVNPKYL
Sbjct: 53  MRHLFGTWKGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRPPHSIHVNPKYL 112

Query: 61  ERQRLQQSSRTKGV 74
           ERQRLQQS RTKG+
Sbjct: 113 ERQRLQQSGRTKGM 126


>AT2G36480.3 | Symbols:  | ENTH/VHS family protein |
           chr2:15302567-15306274 REVERSE LENGTH=886
          Length = 886

 Score = 88.6 bits (218), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 46/74 (62%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           MRHLFGTW+GVF  QTLQ IEKELGF    +G                    IHVNPKYL
Sbjct: 53  MRHLFGTWKGVFHPQTLQLIEKELGFNAKSDGSAAVVSTARAEPQSQRPPHSIHVNPKYL 112

Query: 61  ERQRLQQSSRTKGV 74
           ERQRLQQS RTKG+
Sbjct: 113 ERQRLQQSGRTKGM 126


>AT4G04885.1 | Symbols: PCFS4 | PCF11P-similar protein 4 |
           chr4:2472083-2475417 FORWARD LENGTH=808
          Length = 808

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           MRHLFGTW  VFP   L+ I+ +L  + A N                     IHVNPKYL
Sbjct: 162 MRHLFGTWSSVFPPPVLRKIDMQLQLSSAAN------QSSVGASEPSQPTRGIHVNPKYL 215

Query: 61  ER 62
            R
Sbjct: 216 RR 217