Miyakogusa Predicted Gene
- Lj5g3v0086230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0086230.1 Non Chatacterized Hit- tr|I1M8F2|I1M8F2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45814
PE,76.37,0,seg,NULL; PEROXISOMAL BIOGENESIS FACTOR 11,Peroxisomal
biogenesis factor 11; PEX11,Peroxisomal bioge,CUFF.52501.1
(266 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47750.1 | Symbols: PEX11A | peroxin 11A | chr1:17569388-1757... 266 1e-71
AT3G47430.1 | Symbols: PEX11B | peroxin 11B | chr3:17480798-1748... 82 3e-16
AT1G01820.1 | Symbols: PEX11C | peroxin 11c | chr1:296213-297723... 50 1e-06
AT2G45740.3 | Symbols: PEX11D | peroxin 11D | chr2:18839865-1884... 50 1e-06
AT2G45740.2 | Symbols: PEX11D | peroxin 11D | chr2:18839865-1884... 50 1e-06
AT2G45740.1 | Symbols: PEX11D | peroxin 11D | chr2:18839865-1884... 50 1e-06
>AT1G47750.1 | Symbols: PEX11A | peroxin 11A |
chr1:17569388-17570134 REVERSE LENGTH=248
Length = 248
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/236 (57%), Positives = 167/236 (70%), Gaps = 4/236 (1%)
Query: 33 RDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSR 92
RDFLNH+E YL+KRDGVDKLLKISRY TK++LASS L+ ++ RLK+FESSVGVSR
Sbjct: 15 RDFLNHLETYLSKRDGVDKLLKISRYATKIILASS--LIPETRSIIPRLKSFESSVGVSR 72
Query: 93 KAFRLGKFVQDLNALGAS--DPKRDLVFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHSR 150
KAFRLGKFVQD+NAL +S D +LV +IAYGGEG YYFVEQF+WL KSGLID KHS+
Sbjct: 73 KAFRLGKFVQDINALRSSRWDSNHELVLLIIAYGGEGLYYFVEQFIWLTKSGLIDAKHSK 132
Query: 151 TLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVEIAGLRGVXXXXXXXXXXXXX 210
L KISAWAE VGY GS+++K+RDLR + ++E+C+ S++EI+ RG+
Sbjct: 133 WLQKISAWAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLACDGEDEKMKMIK 192
Query: 211 XXXXMKQLSVVQDLADGLMALDDILDGKAPFSKPXXXXXXXXXXXXXXTHKNWVSC 266
+K LS++QDLADGLM + DI DGK S P THKNW+SC
Sbjct: 193 EKKTLKVLSILQDLADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVSTHKNWISC 248
>AT3G47430.1 | Symbols: PEX11B | peroxin 11B |
chr3:17480798-17481692 FORWARD LENGTH=227
Length = 227
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 9/135 (6%)
Query: 34 DFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRK 93
D ++ + +LAKRDG+DKL+K +Y KL + ++ + + R K +E + G+SRK
Sbjct: 4 DTVDKLVVFLAKRDGIDKLVKTFQYVAKL---ACWHVEATRPEAADRFKKWEVASGLSRK 60
Query: 94 AFRLGKFVQDLNAL----GASDPKRDLVFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHS 149
AFR G+ + NAL GA+ R L +V+A GE Y+F + F+WL++ G ID K +
Sbjct: 61 AFRTGRSLTGFNALRRNPGATPMIRFL--AVLANSGEMVYFFFDHFLWLSRIGSIDAKLA 118
Query: 150 RTLGKISAWAEFVGY 164
+ + ISA+ E GY
Sbjct: 119 KKMSFISAFGESFGY 133
>AT1G01820.1 | Symbols: PEX11C | peroxin 11c | chr1:296213-297723
REVERSE LENGTH=235
Length = 235
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 33 RDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRS-DTNLSQRLKAFESSVGVS 91
R L V YL K + DK+ + +Y +K L P ++ D N S ++
Sbjct: 8 RAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTS-----------LA 56
Query: 92 RKAFRLGKFVQDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLI-DP 146
RK FRL KFV DL+AL + PK L ++ + F++Q VWL ++G+ D
Sbjct: 57 RKVFRLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDK 116
Query: 147 KHSRTLGKISAWA 159
+ + LG+IS +
Sbjct: 117 ERAEILGRISLFC 129
>AT2G45740.3 | Symbols: PEX11D | peroxin 11D |
chr2:18839865-18841102 FORWARD LENGTH=236
Length = 236
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 33 RDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSR 92
R L V YL K + DKL + +Y +K L P ++ + S ++R
Sbjct: 9 RAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQN----------VDKSTSLAR 58
Query: 93 KAFRLGKFVQDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH 148
K FRL KFV DL+ L + PK L ++ + F++Q VWL +SG+ K
Sbjct: 59 KVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKE 118
Query: 149 -SRTLGKISAWA 159
+ LG+IS +
Sbjct: 119 RAELLGRISLFC 130
>AT2G45740.2 | Symbols: PEX11D | peroxin 11D |
chr2:18839865-18841102 FORWARD LENGTH=236
Length = 236
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 33 RDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSR 92
R L V YL K + DKL + +Y +K L P ++ + S ++R
Sbjct: 9 RAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQN----------VDKSTSLAR 58
Query: 93 KAFRLGKFVQDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH 148
K FRL KFV DL+ L + PK L ++ + F++Q VWL +SG+ K
Sbjct: 59 KVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKE 118
Query: 149 -SRTLGKISAWA 159
+ LG+IS +
Sbjct: 119 RAELLGRISLFC 130
>AT2G45740.1 | Symbols: PEX11D | peroxin 11D |
chr2:18839865-18841102 FORWARD LENGTH=236
Length = 236
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 33 RDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSR 92
R L V YL K + DKL + +Y +K L P ++ + S ++R
Sbjct: 9 RAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQN----------VDKSTSLAR 58
Query: 93 KAFRLGKFVQDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH 148
K FRL KFV DL+ L + PK L ++ + F++Q VWL +SG+ K
Sbjct: 59 KVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKE 118
Query: 149 -SRTLGKISAWA 159
+ LG+IS +
Sbjct: 119 RAELLGRISLFC 130