Miyakogusa Predicted Gene

Lj5g3v0086210.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0086210.2 Non Chatacterized Hit- tr|K4A7I1|K4A7I1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034837,38.69,1e-16,seg,NULL,CUFF.52502.2
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19340.1 | Symbols:  | Methyltransferase MT-A70 family protei...   122   2e-28

>AT1G19340.1 | Symbols:  | Methyltransferase MT-A70 family protein |
           chr1:6684798-6686798 FORWARD LENGTH=414
          Length = 414

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 115/230 (50%), Gaps = 25/230 (10%)

Query: 1   MEDSQKLSQFHETGVYHFDDSNAVVFVDPVRVLNRSYNRFTVSPSTYYPRFFESPNPKPL 60
           M  + KL+QF ++G+Y  D+ N   F+D VR+ NRSY RF VSPS YY RFF   N K L
Sbjct: 1   MAKTDKLAQFLDSGIYESDEFNWF-FLDTVRITNRSYTRFKVSPSAYYSRFF---NSKQL 56

Query: 61  STVATSSSPTXXXXXXXXXXXXXQPPPLNHRERIALQRHQEARPLLLKAHECLLKSIRLL 120
           +  ++ S+P                P +   E+ +  RHQEAR  L KAHE  LK I LL
Sbjct: 57  NQHSSESNPKKRKRKQKNSSFHL--PSVG--EQASNLRHQEARLFLSKAHESFLKEIELL 112

Query: 121 GAMSTLRSDSSCLKECLSGQ--HSKHSFVELGELI--PSLEVTLNLRLGDSDTDPHQKLN 176
                L  D+      L  +    + SF+ELG +   P  E+TL+  L            
Sbjct: 113 SLTKGLSDDNDDDDSSLLNKCCDDEVSFIELGGVWQAPFYEITLSFNLHC---------- 162

Query: 177 DLEDSPSVQCYEQRVLPAFNNLVANDTKDDAVAEILSNNYIMPRESCFYM 226
              D+    C EQRV   FNNLV N+  ++  AE  +  YIMPR SCFYM
Sbjct: 163 ---DNEGESCNEQRVFQVFNNLVVNEIGEEVEAEFSNRRYIMPRNSCFYM 209