Miyakogusa Predicted Gene

Lj5g3v0085120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0085120.1 Non Chatacterized Hit- tr|D3BAL6|D3BAL6_POLPA
Putative uncharacterized protein OS=Polysphondylium
pa,36.36,0.000000000000001,Peptidase_M8,Peptidase M8, leishmanolysin;
no description,NULL; Metalloproteases ("zincins"), cataly,CUFF.52499.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42620.2 | Symbols:  | metalloendopeptidases;zinc ion binding...   558   e-159
AT5G42620.1 | Symbols:  | metalloendopeptidases;zinc ion binding...   557   e-159

>AT5G42620.2 | Symbols:  | metalloendopeptidases;zinc ion binding |
           chr5:17066630-17071766 FORWARD LENGTH=889
          Length = 889

 Score =  558 bits (1438), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 257/286 (89%), Positives = 273/286 (95%)

Query: 1   MHVLGFDPHAFAHFRDERKRRRSKVTEQVMDEKIGRMSTRVVLPRVVMHSRHHYAAFSGN 60
           MHVLGFDPHAFAHFRDERKRRR++VTEQ MDEK+GR+ TRVVLPRVVMHSRHHY AFS N
Sbjct: 296 MHVLGFDPHAFAHFRDERKRRRTEVTEQQMDEKLGRLVTRVVLPRVVMHSRHHYGAFSQN 355

Query: 61  FTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYRANYSMA 120
           F+GLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWY+ANYSMA
Sbjct: 356 FSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMA 415

Query: 121 DRLDWGRNQGTEFITSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARY 180
           DRLDWGRNQGT+F+TSPCN+WKGAYHCNTTQ SGCTYNREAEGYCPIL+Y+G+LPQWARY
Sbjct: 416 DRLDWGRNQGTQFVTSPCNMWKGAYHCNTTQLSGCTYNREAEGYCPILSYNGELPQWARY 475

Query: 181 FPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARVPDRMLGEIRGSNSRCMASSLVRTGF 240
           FPQ NKGGQSSLADYCTYFVAYSDGSCTD NSAR PDRMLGE+RGS SRCMASSLVRTGF
Sbjct: 476 FPQPNKGGQSSLADYCTYFVAYSDGSCTDINSARAPDRMLGEVRGSESRCMASSLVRTGF 535

Query: 241 VRGSMTQGNGCYTHRCINNSLEVAVDGIWKVCPQAGGPIQFPGFNG 286
           VRGSMTQGNGCY HRC NN LEVAV+G+WK CPQAGGPI+FPGFNG
Sbjct: 536 VRGSMTQGNGCYQHRCRNNLLEVAVEGVWKFCPQAGGPIRFPGFNG 581


>AT5G42620.1 | Symbols:  | metalloendopeptidases;zinc ion binding |
           chr5:17066630-17071045 FORWARD LENGTH=841
          Length = 841

 Score =  557 bits (1436), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 257/286 (89%), Positives = 273/286 (95%)

Query: 1   MHVLGFDPHAFAHFRDERKRRRSKVTEQVMDEKIGRMSTRVVLPRVVMHSRHHYAAFSGN 60
           MHVLGFDPHAFAHFRDERKRRR++VTEQ MDEK+GR+ TRVVLPRVVMHSRHHY AFS N
Sbjct: 296 MHVLGFDPHAFAHFRDERKRRRTEVTEQQMDEKLGRLVTRVVLPRVVMHSRHHYGAFSQN 355

Query: 61  FTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYRANYSMA 120
           F+GLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWY+ANYSMA
Sbjct: 356 FSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMA 415

Query: 121 DRLDWGRNQGTEFITSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARY 180
           DRLDWGRNQGT+F+TSPCN+WKGAYHCNTTQ SGCTYNREAEGYCPIL+Y+G+LPQWARY
Sbjct: 416 DRLDWGRNQGTQFVTSPCNMWKGAYHCNTTQLSGCTYNREAEGYCPILSYNGELPQWARY 475

Query: 181 FPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARVPDRMLGEIRGSNSRCMASSLVRTGF 240
           FPQ NKGGQSSLADYCTYFVAYSDGSCTD NSAR PDRMLGE+RGS SRCMASSLVRTGF
Sbjct: 476 FPQPNKGGQSSLADYCTYFVAYSDGSCTDINSARAPDRMLGEVRGSESRCMASSLVRTGF 535

Query: 241 VRGSMTQGNGCYTHRCINNSLEVAVDGIWKVCPQAGGPIQFPGFNG 286
           VRGSMTQGNGCY HRC NN LEVAV+G+WK CPQAGGPI+FPGFNG
Sbjct: 536 VRGSMTQGNGCYQHRCRNNLLEVAVEGVWKFCPQAGGPIRFPGFNG 581