Miyakogusa Predicted Gene
- Lj5g3v0014200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0014200.1 Non Chatacterized Hit- tr|B9G6H3|B9G6H3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,44.44,6e-19,
,CUFF.52531.1
(133 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28100.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 103 2e-23
AT1G28100.2 | Symbols: | unknown protein; Has 64 Blast hits to ... 103 2e-23
AT1G28100.3 | Symbols: | unknown protein; Has 64 Blast hits to ... 103 2e-23
AT1G28100.1 | Symbols: | unknown protein; Has 64 Blast hits to ... 103 2e-23
AT1G28100.5 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 52 1e-07
>AT1G28100.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 27 species: Archae - 0;
Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:9802120-9803981 FORWARD LENGTH=290
Length = 290
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 8/114 (7%)
Query: 8 SRFDHWMGPTIRMSLPSFSGGTECNPNLLKYSCKIECRVQAVQPLKVSRSIPITNDDDNE 67
++ +WMGP I+M+LPSFSG T N NLLKYSC + CRV+ V+P VS ++ +D+ E
Sbjct: 184 TKVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGAL----EDETE 239
Query: 68 KSLEDYGSSSHEAKDHENDRQNFSTCVMLSKPILALKFNQMKMQVEAPVVLSQS 121
K E +S + EN+RQ S VMLSKPI+AL+F + MQVEAPVV+ S
Sbjct: 240 KFTEQNHTSQ---ESLENERQ-LSKAVMLSKPIIALQFKCLTMQVEAPVVIYPS 289
>AT1G28100.2 | Symbols: | unknown protein; Has 64 Blast hits to 64
proteins in 27 species: Archae - 0; Bacteria - 14;
Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr1:9802120-9803981 FORWARD LENGTH=282
Length = 282
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 8/114 (7%)
Query: 8 SRFDHWMGPTIRMSLPSFSGGTECNPNLLKYSCKIECRVQAVQPLKVSRSIPITNDDDNE 67
++ +WMGP I+M+LPSFSG T N NLLKYSC + CRV+ V+P VS ++ +D+ E
Sbjct: 176 TKVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGAL----EDETE 231
Query: 68 KSLEDYGSSSHEAKDHENDRQNFSTCVMLSKPILALKFNQMKMQVEAPVVLSQS 121
K E +S + EN+RQ S VMLSKPI+AL+F + MQVEAPVV+ S
Sbjct: 232 KFTEQNHTSQ---ESLENERQ-LSKAVMLSKPIIALQFKCLTMQVEAPVVIYPS 281
>AT1G28100.3 | Symbols: | unknown protein; Has 64 Blast hits to 64
proteins in 27 species: Archae - 0; Bacteria - 14;
Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr1:9802120-9803981 FORWARD LENGTH=282
Length = 282
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 8/114 (7%)
Query: 8 SRFDHWMGPTIRMSLPSFSGGTECNPNLLKYSCKIECRVQAVQPLKVSRSIPITNDDDNE 67
++ +WMGP I+M+LPSFSG T N NLLKYSC + CRV+ V+P VS ++ +D+ E
Sbjct: 176 TKVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGAL----EDETE 231
Query: 68 KSLEDYGSSSHEAKDHENDRQNFSTCVMLSKPILALKFNQMKMQVEAPVVLSQS 121
K E +S + EN+RQ S VMLSKPI+AL+F + MQVEAPVV+ S
Sbjct: 232 KFTEQNHTSQ---ESLENERQ-LSKAVMLSKPIIALQFKCLTMQVEAPVVIYPS 281
>AT1G28100.1 | Symbols: | unknown protein; Has 64 Blast hits to 64
proteins in 27 species: Archae - 0; Bacteria - 14;
Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr1:9802120-9803981 FORWARD LENGTH=282
Length = 282
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 8/114 (7%)
Query: 8 SRFDHWMGPTIRMSLPSFSGGTECNPNLLKYSCKIECRVQAVQPLKVSRSIPITNDDDNE 67
++ +WMGP I+M+LPSFSG T N NLLKYSC + CRV+ V+P VS ++ +D+ E
Sbjct: 176 TKVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLHCRVRPVRPAVVSGAL----EDETE 231
Query: 68 KSLEDYGSSSHEAKDHENDRQNFSTCVMLSKPILALKFNQMKMQVEAPVVLSQS 121
K E +S + EN+RQ S VMLSKPI+AL+F + MQVEAPVV+ S
Sbjct: 232 KFTEQNHTSQ---ESLENERQ-LSKAVMLSKPIIALQFKCLTMQVEAPVVIYPS 281
>AT1G28100.5 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 27 species: Archae - 0;
Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr1:9802120-9803775 FORWARD LENGTH=212
Length = 212
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 8 SRFDHWMGPTIRMSLPSFSGGTECNPNLLKYSCKIE 43
++ +WMGP I+M+LPSFSG T N NLLKYSC +
Sbjct: 176 TKVGNWMGPAIKMALPSFSGNTIYNSNLLKYSCHLH 211