Miyakogusa Predicted Gene

Lj4g3v3115030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3115030.1 Non Chatacterized Hit- tr|I1KQL1|I1KQL1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37670
PE,92.32,0,Sel1,Sel1-like; SEL-1-LIKE PROTEIN, SEL-1L,NULL; SEL-1-LIKE
PROTEIN,NULL; seg,NULL; no
description,T,gene.Ljchr4_pseudomol_20120830.path1.gene8212.1
         (537 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18260.1 | Symbols:  | HCP-like superfamily protein | chr1:62...   885   0.0  
AT1G73570.1 | Symbols:  | HCP-like superfamily protein | chr1:27...   707   0.0  
AT1G70590.1 | Symbols:  | F-box family protein | chr1:26618403-2...    54   3e-07

>AT1G18260.1 | Symbols:  | HCP-like superfamily protein |
           chr1:6279047-6282008 REVERSE LENGTH=678
          Length = 678

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/507 (81%), Positives = 466/507 (91%)

Query: 1   MGLLRERSKSKGFLYHHFAAEGGNMQSKMALAYTYTRQDMFEKAVKLYGELAQVAVNSFL 60
           +G++RE+SKSK FL+H+FAA GGNMQSKMALA+TY RQDM +KAV+LY ELA+ AVNSFL
Sbjct: 136 IGMMREKSKSKSFLHHNFAAAGGNMQSKMALAFTYLRQDMHDKAVQLYAELAETAVNSFL 195

Query: 61  ISKDSPVIEPVRLHNGAEENKEALRKSKGEEDDDFQILEYQAQKGNAAAMYKVGLFYYFG 120
           ISKDSPV+EP R+H+G EENK ALRKS+GEED+DFQILEYQAQKGNA AMYK+GLFYYFG
Sbjct: 196 ISKDSPVVEPTRIHSGTEENKGALRKSRGEEDEDFQILEYQAQKGNANAMYKIGLFYYFG 255

Query: 121 LRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIYARGAGVDRNYTKAFEWLTLASKHHLY 180
           LRGLRRDH+KAL WFLKAVDKGEPRSMELLGEIYARGAGV+RNYTKA EWLTLA+K  LY
Sbjct: 256 LRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLY 315

Query: 181 SAYNGMGYLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYLKGIGVKRDVKLA 240
           SA+NG+GYLYVKGYGVDKKNYTKA+EYFE A DN++  GHYNLGV+YLKGIGV RDV+ A
Sbjct: 316 SAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQA 375

Query: 241 CKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGPWSSLSRWALESY 300
            K+F VAAN GQPKAFYQLAK+FH GVG KKN+ +AT+ YKLVAERGPWSSLSRWALE+Y
Sbjct: 376 TKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAY 435

Query: 301 LKGDIGKAFMLYSRMAELGYEVAQSNAAWILDKYGERSMCMGEIGFCTDAERHQRAHSLW 360
           LKGD+GKA +LYSRMAE+GYEVAQSNAAWILDKYGERSMCMG  GFCTD ERH+RAHSLW
Sbjct: 436 LKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKERHERAHSLW 495

Query: 361 WQASEQGNEHAALLIGDAYYYGRGTNRDYERAAEAYMHAKLQSNAQAMFNLGYMHEHGHG 420
           W+ASEQGNEHAALLIGDAYYYGRGT RD+ RAAEAYMHAK QSNAQAMFNLGYMHEHG G
Sbjct: 496 WRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQG 555

Query: 421 LPFDLHMAKRYYDEALEHDAAAKLPVTLALTSLWVRKNYADSFLVGMIDSLPDVYPKLEA 480
           LPFDLH+AKRYYDE+L+ DAAA+LPVTLAL SLW+R+NYAD+ LV ++DSLP+VYPK+E 
Sbjct: 556 LPFDLHLAKRYYDESLQSDAAARLPVTLALASLWLRRNYADTVLVRVVDSLPEVYPKVET 615

Query: 481 WVEDVLLEEGNATILTLFVCLLTVLYL 507
           W+E+V+ EEGNATILTLFVCL+T+LYL
Sbjct: 616 WIENVVFEEGNATILTLFVCLITILYL 642


>AT1G73570.1 | Symbols:  | HCP-like superfamily protein |
           chr1:27650992-27653942 FORWARD LENGTH=604
          Length = 604

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/489 (69%), Positives = 398/489 (81%), Gaps = 43/489 (8%)

Query: 1   MGLLRERSKSKGFLYHHFAAEGGNMQSKMALAYTYTRQDMFEKAVKLYGELAQVAVNSFL 60
           +G++RE S+SK  L+HHFAA GGNMQSKMALA+ Y RQ+M++KAV+LY ELA+ AVNSFL
Sbjct: 137 IGMMRETSRSKSILHHHFAAAGGNMQSKMALAFRYLRQNMYDKAVELYAELAETAVNSFL 196

Query: 61  ISKDSPVIEPVRLHNGAEENKEALRKSKGEEDDDFQILEYQAQKGNAAAMYKVGLFYYFG 120
           ISKDSP+ EPVR+H G EENK+ALRKS+GEED+DFQILEYQA+KGN+ AM+K+GLFYYFG
Sbjct: 197 ISKDSPMAEPVRIHIGTEENKDALRKSRGEEDEDFQILEYQAEKGNSVAMHKIGLFYYFG 256

Query: 121 LRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIYARGAGVDRNYTKAFEWLTLASKHHLY 180
           LRGLR                                    R++ KA  W + A      
Sbjct: 257 LRGLR------------------------------------RDHAKALYWFSKAE----- 275

Query: 181 SAYNGMGYLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYLKGIGVKRDVKLA 240
             +NG+GYLYVKGYGVDK+NYTKA+EYFEMAA+N++  GHYNLGV+YLKG GVK+DV+ A
Sbjct: 276 --FNGLGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHA 333

Query: 241 CKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGPWSSLSRWALESY 300
            K+F VAAN GQPKAFYQLAK+FH GVG  KN+ +AT  YKLVAERGPWSSLSRWALE+Y
Sbjct: 334 TKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERGPWSSLSRWALEAY 393

Query: 301 LKGDIGKAFMLYSRMAELGYEVAQSNAAWILDKYGERSMCMGEIGFCTDAERHQRAHSLW 360
           LKGD+GKAF+LYSRM+ELGYEVAQSNAAWI+DKYGERSMCMG  GFCTD ERH RAHSLW
Sbjct: 394 LKGDVGKAFILYSRMSELGYEVAQSNAAWIVDKYGERSMCMGVYGFCTDKERHDRAHSLW 453

Query: 361 WQASEQGNEHAALLIGDAYYYGRGTNRDYERAAEAYMHAKLQSNAQAMFNLGYMHEHGHG 420
           W+ASEQGNEHAALLIGDAYYYGRGT RD+ RAAEAYM+AK QSNAQAMFNLGYMHEHG G
Sbjct: 454 WRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMYAKSQSNAQAMFNLGYMHEHGEG 513

Query: 421 LPFDLHMAKRYYDEALEHDAAAKLPVTLALTSLWVRKNYADSFLVGMIDSLPDVYPKLEA 480
           LPFDLH+AKRYYD+AL+ D AAKLPVTLAL S+WVR+NYAD+ LV +++SLP+V+ K+  
Sbjct: 514 LPFDLHLAKRYYDQALQSDTAAKLPVTLALASVWVRRNYADTALVQVLNSLPEVHQKVVE 573

Query: 481 WVEDVLLEE 489
           WVE+ +LEE
Sbjct: 574 WVENGMLEE 582


>AT1G70590.1 | Symbols:  | F-box family protein |
           chr1:26618403-26620159 FORWARD LENGTH=351
          Length = 351

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 10/217 (4%)

Query: 110 MYKVGLFYYFGLRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIY-ARGAGVDRNYTKAF 168
           + + G  Y  G  G+R +  KAL  FLK   +G   +M   G +Y  RG        KA 
Sbjct: 108 LIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERG-----EKEKAV 162

Query: 169 EWLTLASKHHLYSAYNGMGYLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYL 228
                AS+         +G  Y++   V   N  +A ++ + +A+N  V   Y L +   
Sbjct: 163 NLYRRASELGDAVGQCNLGIAYLQ---VQPSNPKEAMKWLKQSAENGYVRAQYQLALCLH 219

Query: 229 KGIGVKRDVKLACKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGP 288
            G  V+ ++  A K+++ AA  G  +A Y ++  + +G G  +N  LA    K  A+ G 
Sbjct: 220 HGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGH 279

Query: 289 WSSLSRWALESYLKGDIGKAFMLYSRMAELGYEVAQS 325
             +     L  + +G++ K+ +LY  +AE G E A +
Sbjct: 280 SKAQFEHGLALFSEGEMLKS-VLYLELAERGGEAAAT 315