Miyakogusa Predicted Gene

Lj4g3v3114870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114870.1 Non Chatacterized Hit- tr|I1KQK8|I1KQK8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,35.53,6e-19,seg,NULL,NODE_85345_length_786_cov_7.073792.path2.1
         (245 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48580.1 | Symbols:  | unknown protein; Has 91 Blast hits to ...    99   2e-21

>AT1G48580.1 | Symbols:  | unknown protein; Has 91 Blast hits to 91
           proteins in 40 species: Archae - 0; Bacteria - 0;
           Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other
           Eukaryotes - 14 (source: NCBI BLink). |
           chr1:17958403-17960610 REVERSE LENGTH=454
          Length = 454

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 24/140 (17%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDITVGSVLLLQKVAVFSPSRSTCYLNITLPNI 60
           + VTLKDPTGT+ AS+HRKV +ES+FG+DI VG+V++L++VAV +PSRS+ YLNITL NI
Sbjct: 187 VMVTLKDPTGTIDASVHRKVISESEFGRDIRVGAVVILKQVAVCAPSRSSTYLNITLKNI 246

Query: 61  LKVFSKDSGP-PSGQVYPASSDNH-TASGLGRH---EKSG-----------------STF 98
            KV +KD+   P+      S+ NH + +GL +    E SG                 + F
Sbjct: 247 SKVITKDTPVLPNQNDSEMSAKNHVSVNGLPKQNDSEMSGKNLVPVNENEEYLRLQPNVF 306

Query: 99  SLPQERTGGTMTKSSFRQEA 118
           S+ Q  T G M  ++ RQ A
Sbjct: 307 SVEQSTTQGIM--NNLRQNA 324