Miyakogusa Predicted Gene

Lj4g3v3114840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114840.1 Non Chatacterized Hit- tr|I1K5C2|I1K5C2_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,96.51,7.9874e-44,Tubulin nucleotide-binding
domain-like,Tubulin/FtsZ, GTPase domain; TUBULIN,Tubulin;
Tubulin,Tubulin,FS346488.path2.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962...   174   2e-44
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:284513...   161   6e-41
AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:251845...   161   7e-41
AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:251815...   161   7e-41
AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:126442...   160   1e-40
AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:178594...   160   1e-40
AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:693803...   158   6e-40
AT5G23860.2 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044...   158   6e-40
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044...   158   6e-40
AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:111822...   154   1e-38
AT1G64740.1 | Symbols: TUA1 | alpha-1 tubulin | chr1:24050114-24...    88   1e-18
AT5G19780.1 | Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-668...    85   1e-17
AT5G19770.1 | Symbols: TUA3 | tubulin alpha-3 | chr5:6682761-668...    85   1e-17
AT4G14960.1 | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4...    85   1e-17
AT4G14960.2 | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4...    84   2e-17
AT1G50010.1 | Symbols: TUA2 | tubulin alpha-2 chain | chr1:18517...    83   5e-17
AT1G04820.1 | Symbols: TUA4, TOR2 | tubulin alpha-4 chain | chr1...    83   5e-17
AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin  comp...    74   1e-14
AT3G61650.1 | Symbols: TUBG1 | gamma-tubulin | chr3:22812601-228...    74   1e-14

>AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin |
          chr5:3961317-3962971 REVERSE LENGTH=449
          Length = 449

 Score =  174 bits (440), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 79/86 (91%), Positives = 83/86 (96%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIGSKFWEVVCDEHGIDP G+YVGNS+LQLERVNVYYNE S GRYV
Sbjct: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRA+LMDLEPGTMD+VRTGPYGQIFR
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFR 86


>AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain |
          chr1:28451378-28453602 REVERSE LENGTH=447
          Length = 447

 Score =  161 bits (408), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 72/87 (82%), Positives = 82/87 (94%), Gaps = 1/87 (1%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNS-ELQLERVNVYYNEGSNGRY 59
          MREILH+QGGQCGNQIGSKFWEV+CDEHG+DP G+Y G+S +LQLER+NVYYNE S GRY
Sbjct: 1  MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 60 VPRAVLMDLEPGTMDAVRTGPYGQIFR 86
          VPRAVLMDLEPGTMD++R+GPYGQIFR
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFR 87


>AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 |
          chr5:25184501-25186426 FORWARD LENGTH=450
          Length = 450

 Score =  161 bits (408), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 80/86 (93%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIG+KFWEVVC EHGIDP G+Y G+S+LQLER+NVYYNE S GR+V
Sbjct: 1  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD++R+GPYGQ FR
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFR 86


>AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 |
          chr5:25181560-25183501 FORWARD LENGTH=450
          Length = 450

 Score =  161 bits (408), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 80/86 (93%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIG+KFWEVVC EHGIDP G+Y G+S+LQLER+NVYYNE S GR+V
Sbjct: 1  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD++R+GPYGQ FR
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFR 86


>AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain |
          chr2:12644258-12645932 REVERSE LENGTH=449
          Length = 449

 Score =  160 bits (406), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/86 (88%), Positives = 80/86 (93%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIGSKFWEVV  EHGID  G+YVG+SELQLERVNVYYNE S GRYV
Sbjct: 1  MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD+VR+GPYGQIFR
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFR 86


>AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 |
          chr5:17859442-17860994 REVERSE LENGTH=444
          Length = 444

 Score =  160 bits (406), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 70/86 (81%), Positives = 81/86 (94%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIG+KFWEV+CDEHGID  GQYVG+S LQLER++VY+NE S G+YV
Sbjct: 1  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD++R+GP+GQIFR
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFR 86


>AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain |
          chr1:6938033-6940481 REVERSE LENGTH=449
          Length = 449

 Score =  158 bits (400), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 81/87 (93%), Gaps = 1/87 (1%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNS-ELQLERVNVYYNEGSNGRY 59
          MREILHIQGGQCGNQIGSKFWEV+CDEHGID  G+Y G++ +LQLER+NVYYNE S GRY
Sbjct: 1  MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60

Query: 60 VPRAVLMDLEPGTMDAVRTGPYGQIFR 86
          VPRAVLMDLEPGTMD++R+GP+GQIFR
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFR 87


>AT5G23860.2 | Symbols: TUB8 | tubulin beta 8 |
          chr5:8042962-8044528 FORWARD LENGTH=449
          Length = 449

 Score =  158 bits (400), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 72/86 (83%), Positives = 79/86 (91%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIG+KFWEVVC EHGID  G+Y G ++LQLERVNVYYNE S GR+V
Sbjct: 1  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD+VR+GPYGQIFR
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFR 86


>AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 |
          chr5:8042962-8044528 FORWARD LENGTH=449
          Length = 449

 Score =  158 bits (400), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 72/86 (83%), Positives = 79/86 (91%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIG+KFWEVVC EHGID  G+Y G ++LQLERVNVYYNE S GR+V
Sbjct: 1  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD+VR+GPYGQIFR
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFR 86


>AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain |
          chr4:11182218-11183840 FORWARD LENGTH=444
          Length = 444

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 67/86 (77%), Positives = 79/86 (91%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYV 60
          MREILHIQGGQCGNQIG+KFWEV+C EHGID  GQ  G+++LQLER+NVY+NE S G+YV
Sbjct: 1  MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60

Query: 61 PRAVLMDLEPGTMDAVRTGPYGQIFR 86
          PRAVLMDLEPGTMD++R+GP+GQIFR
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFR 86


>AT1G64740.1 | Symbols: TUA1 | alpha-1 tubulin |
          chr1:24050114-24052296 FORWARD LENGTH=450
          Length = 450

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQL--ERVNVYYNEGSNGR 58
          MREI+ I  GQ G Q+G+  WE+ C EHGI P G    +S +    +  N +++E S+G+
Sbjct: 1  MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60

Query: 59 YVPRAVLMDLEPGTMDAVRTGPYGQIF 85
          +VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLF 87


>AT5G19780.1 | Symbols: TUA5 | tubulin alpha-5 |
          chr5:6687212-6688926 FORWARD LENGTH=450
          Length = 450

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQL--ERVNVYYNEGSNGR 58
          MREI+ I  GQ G Q+G+  WE+ C EHGI P G    ++ + +  +  N +++E   G+
Sbjct: 1  MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 59 YVPRAVLMDLEPGTMDAVRTGPYGQIF 85
          +VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLF 87


>AT5G19770.1 | Symbols: TUA3 | tubulin alpha-3 |
          chr5:6682761-6684474 REVERSE LENGTH=450
          Length = 450

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQL--ERVNVYYNEGSNGR 58
          MREI+ I  GQ G Q+G+  WE+ C EHGI P G    ++ + +  +  N +++E   G+
Sbjct: 1  MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60

Query: 59 YVPRAVLMDLEPGTMDAVRTGPYGQIF 85
          +VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLF 87


>AT4G14960.1 | Symbols: TUA6 | Tubulin/FtsZ family protein |
          chr4:8548753-8550319 REVERSE LENGTH=427
          Length = 427

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQ--LERVNVYYNEGSNGR 58
          MRE + I  GQ G Q+G+  WE+ C EHGI P GQ  G+  +    +  N +++E   G+
Sbjct: 1  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 59 YVPRAVLMDLEPGTMDAVRTGPYGQIF 85
          +VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLF 87


>AT4G14960.2 | Symbols: TUA6 | Tubulin/FtsZ family protein |
          chr4:8548769-8550319 REVERSE LENGTH=450
          Length = 450

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQL--ERVNVYYNEGSNGR 58
          MRE + I  GQ G Q+G+  WE+ C EHGI P GQ  G+  +    +  N +++E   G+
Sbjct: 1  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 59 YVPRAVLMDLEPGTMDAVRTGPYGQIF 85
          +VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLF 87


>AT1G50010.1 | Symbols: TUA2 | tubulin alpha-2 chain |
          chr1:18517737-18519729 FORWARD LENGTH=450
          Length = 450

 Score = 82.8 bits (203), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 8/90 (8%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQY-----VGNSELQLERVNVYYNEGS 55
          MRE + I  GQ G Q+G+  WE+ C EHGI P GQ      VG  +   +  N +++E  
Sbjct: 1  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DAFNTFFSETG 57

Query: 56 NGRYVPRAVLMDLEPGTMDAVRTGPYGQIF 85
           G++VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87


>AT1G04820.1 | Symbols: TUA4, TOR2 | tubulin alpha-4 chain |
          chr1:1356421-1358266 REVERSE LENGTH=450
          Length = 450

 Score = 82.8 bits (203), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 8/90 (8%)

Query: 1  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQY-----VGNSELQLERVNVYYNEGS 55
          MRE + I  GQ G Q+G+  WE+ C EHGI P GQ      VG  +   +  N +++E  
Sbjct: 1  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DAFNTFFSETG 57

Query: 56 NGRYVPRAVLMDLEPGTMDAVRTGPYGQIF 85
           G++VPRAV +DLEP  +D VRTG Y Q+F
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87


>AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin
          complex protein 2 | chr5:1679340-1681719 FORWARD
          LENGTH=474
          Length = 474

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 54/84 (64%)

Query: 2  REILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYVP 61
          REI+ +Q GQCGNQIG +FW+ +C EHGI   G     +    +R +V++ +  +  Y+P
Sbjct: 3  REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62

Query: 62 RAVLMDLEPGTMDAVRTGPYGQIF 85
          RA+L+DLEP  ++ ++ G Y  ++
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLY 86


>AT3G61650.1 | Symbols: TUBG1 | gamma-tubulin |
          chr3:22812601-22815011 REVERSE LENGTH=474
          Length = 474

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 54/84 (64%)

Query: 2  REILHIQGGQCGNQIGSKFWEVVCDEHGIDPIGQYVGNSELQLERVNVYYNEGSNGRYVP 61
          REI+ +Q GQCGNQIG +FW+ +C EHGI   G     +    +R +V++ +  +  Y+P
Sbjct: 3  REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62

Query: 62 RAVLMDLEPGTMDAVRTGPYGQIF 85
          RA+L+DLEP  ++ ++ G Y  ++
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLY 86