Miyakogusa Predicted Gene
- Lj4g3v3114630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3114630.1 tr|G7LDB1|G7LDB1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula GN=MTR_8g1,84.82,0,no
description,Tetratricopeptide-like helical; TPR-like,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT N,gene.g58158.t1.1
(771 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 1103 0.0
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 654 0.0
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 625 e-179
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 543 e-154
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 535 e-152
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 527 e-149
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 525 e-149
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 513 e-145
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 505 e-143
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 495 e-140
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 493 e-139
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 493 e-139
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 492 e-139
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 491 e-138
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 488 e-138
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 479 e-135
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 478 e-135
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 478 e-135
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 472 e-133
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 471 e-133
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 467 e-131
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 465 e-131
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 463 e-130
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 463 e-130
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 462 e-130
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 461 e-130
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 460 e-129
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 451 e-127
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 450 e-126
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 446 e-125
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-124
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 444 e-124
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 440 e-123
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 439 e-123
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 437 e-122
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 436 e-122
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 436 e-122
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 435 e-122
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 434 e-122
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 430 e-120
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 429 e-120
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 426 e-119
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 421 e-118
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 415 e-116
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-115
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 406 e-113
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 404 e-112
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 390 e-108
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 384 e-106
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 377 e-104
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-102
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 365 e-101
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 360 2e-99
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 7e-99
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 356 3e-98
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 356 4e-98
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 4e-98
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 354 1e-97
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 2e-97
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 353 2e-97
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 8e-95
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 343 3e-94
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 342 6e-94
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 1e-93
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 3e-93
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 335 1e-91
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 4e-91
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 328 6e-90
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 9e-90
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 1e-89
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 1e-89
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 325 5e-89
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 9e-88
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 3e-87
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 319 4e-87
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 2e-84
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 5e-83
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 8e-83
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 1e-82
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 304 2e-82
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 2e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 8e-82
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 2e-81
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 299 6e-81
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 296 4e-80
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 294 2e-79
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 4e-79
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 4e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 5e-79
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 3e-78
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 1e-77
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 285 7e-77
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 3e-76
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 4e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 2e-72
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 4e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 7e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 4e-71
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 5e-71
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 1e-67
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 7e-66
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 8e-66
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 3e-65
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 3e-65
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 1e-64
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 6e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 5e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 7e-60
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 215 1e-55
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 1e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 9e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 8e-43
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 3e-38
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 157 3e-38
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 6e-36
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 6e-36
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 1e-35
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 2e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 4e-35
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 9e-35
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 5e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-33
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 4e-33
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 139 1e-32
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 137 3e-32
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 3e-32
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 5e-32
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 6e-32
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 135 2e-31
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 134 2e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 5e-31
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 5e-31
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 132 7e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 4e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 4e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 1e-29
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-29
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 2e-29
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 4e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 7e-29
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 7e-29
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 3e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 6e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 121 2e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 4e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 7e-26
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 114 3e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 7e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 107 3e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 105 1e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 2e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 3e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 96 7e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 96 1e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 94 4e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 94 4e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 89 1e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 87 4e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 6e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 6e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 6e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 7e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 73 6e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 7e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 4e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 7e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 6e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 8e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 4e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-06
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/728 (68%), Positives = 611/728 (83%), Gaps = 2/728 (0%)
Query: 46 KPDVK--DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSL 103
KP +K D D+ +WN IS++MR G C+ ALRVF MPR SSVSYN MISGYLRN F L
Sbjct: 54 KPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
AR LFD+MP+RDLVSWNVM+ GYVRNR LG AR LF+ MP++DV SWN MLSGYAQNG
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 223
D+AR VF +MP KN +SWN LL+AYV N ++EEAC LF S+ +W L+SWNCL+GGFVK+K
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK 233
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 283
+ AR+ FD M+VRDVVSWNT+I+GYAQ G + +A+ LFD+SP QDVFTWTAMVSGY+Q
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 343
N M++EAR FD+MP++NE+S+NAM+AGYVQ +M+MA+ELF+ MP RNVS+WNTMITGY
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
Q G I++A+ LFD MP+RD VSWAA+I+GY+Q+GH EAL +F++++R+G LNRS+FS
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
ALSTCAD+ ALELGKQ+HG++VK GYETGCFVGNALL MY KCGSI EAND+F+ + K
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 523
D+VSWNTMIAGY+RHGFG+ AL FESMK G+KPD+ TMV VLSACSH GL+D+G +YF
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 524 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
Y+M +DY V P+S+HY CM+DLLGRAG LE+A +LM+NMPFEP AA WG LLGASR+HGN
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 584 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
TEL E AA+ +F MEP NSGMYVLLSNLYA+SGRW D G +R RMRD GV+KV GYSW+E
Sbjct: 594 TELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Query: 644 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYH 703
+QNK H F+VGD FHPEKD I+AFLEELDL+M++ GYVS T +VLHDVEEEEKE M++YH
Sbjct: 654 IQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYH 713
Query: 704 SEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 763
SE+LAVA+GI+ + +GRPIRVIKNLRVCEDCHNAIK++++I GRLIILRD++RFHHF +G
Sbjct: 714 SERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDG 773
Query: 764 ICSCGDYW 771
CSCGDYW
Sbjct: 774 SCSCGDYW 781
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/696 (44%), Positives = 450/696 (64%), Gaps = 5/696 (0%)
Query: 78 NTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARR 137
T+P ++ N I+ R + AR LFD + + SWN M+ GY N DAR+
Sbjct: 13 TTIPPPTA---NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARK 69
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 197
LFD MP ++++SWN ++SGY +NG DEAR+VF MP +N +SW L+ YVHNG+++ A
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 257
LF + +SW ++ GF++ + A KL++ + +D ++ +MI G ++G +
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 258 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 317
+A+ +FD+ + V TWT MV+GY QN +D+AR FD MP+K E+S+ +M+ GYVQ+ +
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 318 MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
++ A ELFE MP + V + N MI+G GQ G+IA+AR++FD M +R+ SW +I + +
Sbjct: 250 IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G EAL++FI +++ G T LS CA +A+L GKQ+H Q+V+ ++ +V
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-V 496
+ L+ MY KCG + ++ +F+ KD++ WN++I+GYA HG G++AL VF M G
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 497 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 556
KP+E+T V LSACS+AG+++ G + + SM + V P + HY CM+D+LGRAGR EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 557 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 616
+++ +M EP AA WG+LLGA R H ++ E A+ + ++EP NSG Y+LLSN+YA+ G
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQG 549
Query: 617 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC-FHPEKDRIYAFLEELDLKM 675
RWAD +R M+ V+K G SW EV+NK+H FT G HPE++ I L+ELD +
Sbjct: 550 RWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609
Query: 676 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 735
R GY LHDV+EEEK + LKYHSE+LAVA+ +L + G PIRV+KNLRVC DCH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669
Query: 736 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
AIK ISK+ R IILRD++RFHHF G CSC DYW
Sbjct: 670 TAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 252/463 (54%), Gaps = 13/463 (2%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ D +++ WN ++S +M+NG D A +VF+ MP R+ VS+ A++ GY+ N + +A L
Sbjct: 73 EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
F KMP+++ VSW VML G++++ R+ DA +L++ +P KD ++ +M+ G + G DEAR
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 227
E+F +M ++ I+W ++ Y N R+++A ++FD + +SW ++ G+V+ +
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 287
A +LF+ M V+ V++ N MISG Q G++++A+ +FD ++ +W ++ + +NG
Sbjct: 253 AEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFE 312
Query: 288 DEARTFFDQMPQK-------NEISYNAMVAGYVQ-SNKMDMARELFEAMPSRNVSSWNTM 339
EA F M ++ IS ++ A + + +L +V + +
Sbjct: 313 LEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVL 372
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES-LN 398
+T Y + G++ +++ +FD P +D + W +IISGYA G EEAL +F E+ G + N
Sbjct: 373 MTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPN 432
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVF 457
TF LS C+ +E G +I+ + G + ++ M + G EA ++
Sbjct: 433 EVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 458 EGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
+ + E D W +++ H + + F + K I ++P+
Sbjct: 493 DSMTVEPDAAVWGSLLGACRTH--SQLDVAEFCAKKLIEIEPE 533
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 437/681 (64%), Gaps = 1/681 (0%)
Query: 92 ISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN 151
IS R + + AR FD + + + SWN +++GY N +AR+LFD M +++VVSWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 152 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 211
++SGY +N EAR VF MP +N +SW ++ Y+ G + EA LF + +S
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
W + GG + + ARKL+D M V+DVV+ MI G ++G + +A+ +FD+ ++V
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR 331
TWT M++GY QN +D AR F+ MP+K E+S+ +M+ GY S +++ A E FE MP +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
V + N MI G+G+ G+I++AR++FD+M RD +W +I Y + G EAL++F +++
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
+ G + + LS CA +A+L+ G+Q+H +V+ ++ +V + L+ MY KCG +
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+A VF+ KD++ WN++I+GYA HG G++AL +F M + G P+++T++ +L+ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
+AG ++ G E F SM + VTP+ +HY+C +D+LGRAG++++A +L+ +M +P A W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 572 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
GALLGA + H +L E AA+ +F+ EP N+G YVLLS++ A+ +W D +R MR
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 632 GVQKVTGYSWVEVQNKIHKFTVGDCF-HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 690
V K G SW+EV K+H FT G HPE+ I LE+ D +R GY VLHD
Sbjct: 564 NVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHD 623
Query: 691 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLII 750
V+EEEK L HSE+LAVA+G+L +P G PIRV+KNLRVC DCH AIK ISK+ R II
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREII 683
Query: 751 LRDSHRFHHFNEGICSCGDYW 771
LRD++RFHHFN G CSC DYW
Sbjct: 684 LRDANRFHHFNNGECSCRDYW 704
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 226/468 (48%), Gaps = 51/468 (10%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
WN ++S + NG A ++F+ M R+ VS+N ++SGY++N AR++F+ MP+R++
Sbjct: 51 WNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV 110
Query: 117 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 176
VSW M+ GY++ +G+A LF MP+++ VSW M G +G D+AR+++ MP K
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK 170
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 236
+ ++ ++ GR++EA +FD + +++W ++ G+ + + ARKLF+ M
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP 230
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
+ VSW +M+ GY G + A+ F+ P + V AM+ G+ + G + +AR FD
Sbjct: 231 EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 297 MPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV-SSWNTMI--------------- 340
M ++ ++ M+ Y + A +LF M + V S+ ++I
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 341 -----------------------TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
T Y + G++ +A+ +FD +D + W +IISGYA
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ------VVKTGYE 431
G EEAL +F E+ G N+ T L+ C+ LE G +I V T
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARH 478
C V M + G + +A ++ E + K D W ++ H
Sbjct: 471 YSCTV-----DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/592 (45%), Positives = 382/592 (64%), Gaps = 2/592 (0%)
Query: 182 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK-RKMLGAARKLFDKMHVRDV 240
N ++A V +G I+ A R+F I+WN L+ G K + A +LFD++ D
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
S+N M+S Y ++ + +A++ FD+ P +D +W M++GY + G +++AR F M +K
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF-DMM 359
NE+S+NAM++GY++ ++ A F+ P R V +W MITGY + + A +F DM
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
++ V+W A+ISGY + E+ L +F + +G N S S AL C++++AL+LG+
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 420 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 479
QIH V K+ +L+ MY KCG +G+A +FE +++KDVV+WN MI+GYA+HG
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 480 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 539
+AL +F M ++PD IT V VL AC+HAGL++ G YF SM +DY V P HY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 540 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 599
TCM+DLLGRAG+LEEA L+R+MPF P AA +G LLGA R+H N EL E AAE + ++
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 600 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 659
N+ YV L+N+YA+ RW D +R RM++ V KV GYSW+E++NK+H F D HP
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544
Query: 660 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 719
E D I+ L+EL+ KM+ GY + LH+VEEE+KE +L +HSEKLAVAFG + +P G
Sbjct: 545 ELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 604
Query: 720 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
I+V KNLR+C DCH AIK IS+I R II+RD+ RFHHF +G CSCGDYW
Sbjct: 605 SQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 195/395 (49%), Gaps = 55/395 (13%)
Query: 45 NKPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN-ARFSL 103
KP +D + NK+I+ +R+G D ALRVF+ M ++++++N+++ G ++ +R
Sbjct: 53 TKPSDQD-QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
A LFD++P+ D S+N+ML+ YVRN A+ FD MP KD SWN M++GYA+ G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 223
++ARE+FY M KN +SWN +++ Y+ G +E+A F +++W ++ G++K K
Sbjct: 172 EKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 224 MLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDMSQAKNLF------------------- 263
+ A +F M V +++V+WN MISGY ++ LF
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 264 -----------DQSPHQ---------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 303
+ HQ DV T+++S Y + G L +A F+ M +K+ +
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPSRNV-SSWNTMIT---GYGQNGDIAQARKLFDMM 359
++NAM++GY Q D A LF M + W T + G + F+ M
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 360 -------PQRDCVSWAAIISGYAQTGHYEEALNMF 387
PQ D + ++ + G EEAL +
Sbjct: 412 VRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLI 444
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/788 (36%), Positives = 443/788 (56%), Gaps = 91/788 (11%)
Query: 75 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD 134
R+ T + N ++ LR + S AR ++D+MP ++ VS N M++G+V+ +
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSS 97
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA------ISWNGLLA-- 186
AR LFD+MP + VV+W ++ YA+N + DEA ++F QM ++ +++ LL
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 187 --AYVHN--GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 242
A N G++ ++ L N L+ + + + L A LF+++ +D V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 243 WNTMISGYAQDGDMSQAKNLF---DQSPHQDV-FTWT---------------------AM 277
+NT+I+GY +DG +++ +LF QS HQ FT++ ++
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 278 VSGY-----VQNGMLD---------EARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE 323
+G+ V N +LD E R FD+MP+ + +SYN +++ Y Q+++ + +
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 324 LFEAMP-----------------SRNVSSW----------------------NTMITGYG 344
F M + N+SS N+++ Y
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 345 QNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
+ +A +F +PQR VSW A+ISGY Q G + L +F +++ ++STF+
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKD 464
L A A+L LGKQ+H ++++G F G+ L+ MY KCGSI +A VFE + +++
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 465 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFY 524
VSWN +I+ +A +G G+ A+ F M G++PD ++++GVL+ACSH G +++GTEYF
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 525 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 584
+M+ Y +TP KHY CM+DLLGR GR EA+ LM MPFEP W ++L A RIH N
Sbjct: 578 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 585 ELGEKAAEMVFKMEP-HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
L E+AAE +F ME ++ YV +SN+YAA+G W +++ MR+ G++KV YSWVE
Sbjct: 638 SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Query: 644 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYH 703
V +KIH F+ D HP D I + EL ++ REGY T V+ DV+E+ K LKYH
Sbjct: 698 VNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYH 757
Query: 704 SEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 763
SE+LAVAF +++ P G PI V+KNLR C DCH AIK ISKIV R I +RD+ RFHHF+EG
Sbjct: 758 SERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEG 817
Query: 764 ICSCGDYW 771
+CSCGDYW
Sbjct: 818 VCSCGDYW 825
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 200/406 (49%), Gaps = 22/406 (5%)
Query: 186 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
A ++ R++ R+ + D + N ++ ++R + AARK++D+M ++ VS NT
Sbjct: 27 ATFLDTRRVD--ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----- 300
MISG+ + GD+S A++LFD P + V TWT ++ Y +N DEA F QM +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 301 -NEISYNAMVAG---YVQSNKMDMAREL-----FEAMPSRNVSSWNTMITGYGQNGDIAQ 351
+ +++ ++ G V N + F+ P VS N ++ Y + +
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDL 202
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
A LF+ +P++D V++ +I+GY + G Y E++++F+++++ G + TFS L
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 471
+ LG+Q+H V TG+ VGN +L Y K + E +F+ + E D VS+N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 472 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 531
I+ Y++ + +L F M+ +G +LS ++ + G + +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ--LHCQALLA 380
Query: 532 VTPSSKHY-TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
S H ++D+ + EEA+ + +++P + SW AL+
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALIS 425
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 144/628 (22%), Positives = 246/628 (39%), Gaps = 146/628 (23%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS------VSYNAMISG----YLRNA- 99
D ++ W ++ + RN H D A ++F M R SS V++ ++ G +NA
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 100 --RFSLARDL-FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSG 156
+ A L FD P L NV+L Y RRL A LF+ +P+KD V++N +++G
Sbjct: 167 GQVHAFAVKLGFDTNPF--LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 157 YAQNGYADEAREVFYQMPH---------------------------------------KN 177
Y ++G E+ +F +M ++
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 178 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV 237
A N +L Y + R+ E LFD + + +S+N ++ + + A+ F +M
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 238 ----RDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDE 289
R + TM+S A + + L Q + + ++V Y + M +E
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 290 ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV--------------SS 335
A F +PQ+ +S+ A+++GYVQ +LF M N+ +S
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 336 WNTMITG-------------------------YGQNGDIAQARKLFDMMPQRDCVSWAAI 370
+ +++ G Y + G I A ++F+ MP R+ VSW A+
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
IS +A G E A+ F ++ G + + L+ C+ +E G +
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE---------- 574
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
YF +A GI K + M+ R+G +A + +
Sbjct: 575 -------------YF------QAMSPIYGITPKK-KHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 491 MKTIGVKPDEITMVGVLSAC---SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
M +PDEI VL+AC + L +R E +SM K + Y M ++
Sbjct: 615 MP---FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK----LRDAAAYVSMSNIYA 667
Query: 548 RAGRLEEAQDLMRNMP----FEPPAASW 571
AG E+ +D+ + M + PA SW
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSW 695
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 290/755 (38%), Positives = 426/755 (56%), Gaps = 57/755 (7%)
Query: 69 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 128
HC RV + S N +++ Y + AR LFD+MP R SWN +L+ Y +
Sbjct: 37 HC----RVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 129 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGL 184
+ FD +PQ+D VSW M+ GY G +A V M + + +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 185 LAAYVHNGRIEEACRLFDSKSDWEL-----ISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
LA+ +E ++ L +S N L+ + K A+ +FD+M VRD
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVS-NSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
+ SWN MI+ + Q G M A F+Q +D+ TW +M+SG+ Q G A F +M +
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 300 KNEIS----------------------------------------YNAMVAGYVQSNKMD 319
+ +S NA+++ Y + ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 320 MARELFEAMPSRN--VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
AR L E +++ + + ++ GY + GD+ QA+ +F + RD V+W A+I GY Q
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G Y EA+N+F + G+ N T + LS + +A+L GKQIHG VK+G V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 438 NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 496
NAL+ MY K G+I A+ F+ I E+D VSW +MI A+HG ++AL +FE+M G+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 497 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 556
+PD IT VGV SAC+HAGL+++G +YF M + P+ HY CM+DL GRAG L+EAQ
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 557 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 616
+ + MP EP +WG+LL A R+H N +LG+ AAE + +EP NSG Y L+NLY+A G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 617 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 676
+W +A +R M+D V+K G+SW+EV++K+H F V D HPEK+ IY ++++ +++
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 677 REGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHN 736
+ GYV T VLHD+EEE KE +L++HSEKLA+AFG+++ P +R++KNLRVC DCH
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 737 AIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
AIK ISK+VGR II+RD+ RFHHF +G CSC DYW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 223/521 (42%), Gaps = 102/521 (19%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGY------------------- 95
WN V+S + + G DS F+ +P+R SVS+ MI GY
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 96 -LRNARFSLARDLFDKMPQRDL--------------VSWNVMLTGYVRN--RRLGD---A 135
+ +F+L L R + + NV ++ + N + GD A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 136 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG--- 192
+ +FD M +D+ SWNAM++ + Q G D A F QM ++ ++WN +++ + G
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 193 ------------------------------RIEEAC-------RLFDSKSDWELISWNCL 215
+E+ C + + D I N L
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 216 MGGFVKRKMLGAARKLFDKMHVRD--VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT 273
+ + + + AR+L ++ +D + + ++ GY + GDM+QAKN+F +DV
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 274 WTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELF-EAM 328
WTAM+ GY Q+G EA F M + N + AM++ + +++ A+
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 329 PS---RNVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHYEEAL 384
S +VS N +IT Y + G+I A + FD++ +RD VSW ++I AQ GH EEAL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH------GQVVKTGYETGCFVGN 438
+F + +G + T+ S C + G+Q +++ T C V
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV-- 558
Query: 439 ALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARH 478
++ + G + EA + E + E DVV+W ++++ H
Sbjct: 559 ---DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 187/447 (41%), Gaps = 98/447 (21%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ WN +I+ HM+ G D A+ F M R V++N+MISG+ + A D+F KM
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 113 QRDLVS----------------------------------------WNVMLTGYVRNRRL 132
+ L+S N +++ Y R +
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 133 GDARRLFDSMPQKD--VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVH 190
ARRL + KD + + A+L GY + G ++A+ +F + ++ ++W ++ Y
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 191 NGRIEEACRLFDS-------------------------------------KSD--WELIS 211
+G EA LF S KS + +
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDMSQAKNLFD----QS 266
N L+ + K + +A + FD + RD VSW +MI AQ G +A LF+ +
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMA 321
D T+ + S G++++ R +FD M ++I Y MV + ++ + A
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 322 RELFEAMP-SRNVSSWNTMITG--YGQNGDIAQ--ARKLFDMMPQRDCVSWAAIISGYAQ 376
+E E MP +V +W ++++ +N D+ + A +L + P+ + +++A+ + Y+
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE-NSGAYSALANLYSA 629
Query: 377 TGHYEEALNMFIEIKRDGESLNRSTFS 403
G +EEA + +K DG FS
Sbjct: 630 CGKWEEAAKIRKSMK-DGRVKKEQGFS 655
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 50/250 (20%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD 109
KD + + ++ +++ G + A +F ++ R V++ AMI GY ++ + A +LF
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 110 KMP---QR------------------------------------DLVSWNVMLTGYVRNR 130
M QR + N ++T Y +
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 131 RLGDARRLFDSMP-QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLL 185
+ A R FD + ++D VSW +M+ AQ+G+A+EA E+F M + + I++ G+
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 186 AAYVHNGRIEEACRLFDSKSDWELI-----SWNCLMGGFVKRKMLGAARKLFDKMHVR-D 239
+A H G + + + FD D + I + C++ F + +L A++ +KM + D
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 240 VVSWNTMISG 249
VV+W +++S
Sbjct: 583 VVTWGSLLSA 592
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/751 (37%), Positives = 432/751 (57%), Gaps = 57/751 (7%)
Query: 76 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 135
F PR + N +I Y +++ + AR LFD++ + D ++ M++GY + + A
Sbjct: 42 TFGFQPRAHIL--NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 136 RRLFDSMP--QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYV 189
R +F+ P +D V +NAM++G++ N A +F +M H+ + ++ +LA
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 190 HNGRIEEACRLFDS---KSDWELISW--NCLMGGFVK----RKMLGAARKLFDKMHVRDV 240
E+ C F + KS I+ N L+ + K +L +ARK+FD++ +D
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 241 VSWNTMISGYAQDGDMSQAKNLFD-QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP- 298
SW TM++GY ++G + L + + + + AM+SGYV G EA +M
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 299 ---QKNEISY----------------------------------NAMVAGYVQSNKMDMA 321
+ +E +Y N++V+ Y + K D A
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEA 339
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
R +FE MP++++ SWN +++GY +G I +A+ +F M +++ +SW +ISG A+ G E
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
E L +F +KR+G FS A+ +CA + A G+Q H Q++K G+++ GNAL+
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
MY KCG + EA VF + D VSWN +IA +HG G +A+ V+E M G++PD I
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T++ VL+ACSHAGL+D+G +YF SM Y + P + HY +IDLL R+G+ +A+ ++ +
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 562 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 621
+PF+P A W ALL R+HGN ELG AA+ +F + P + G Y+LLSN++AA+G+W +
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 622 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYV 681
+R MRD GV+K SW+E++ ++H F V D HPE + +Y +L++L +MRR GYV
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYV 699
Query: 682 SSTKLVLHDVEEE-EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKH 740
T VLHDVE + KE ML HSEK+AVAFG++ +P G IR+ KNLR C DCHN +
Sbjct: 700 PDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRF 759
Query: 741 ISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+S +V R IILRD RFHHF G CSCG++W
Sbjct: 760 LSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 30/275 (10%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
DL+ WN ++S ++ +GH A +F M ++ +S+ MISG N LF M
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 113 QRDLVSWNVMLTGYVR---------NRRLGDARRL---FDSMPQKDVVSWNAMLSGYAQN 160
+ + +G ++ N + A+ L FDS + + NA+++ YA+
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS----SLSAGNALITMYAKC 465
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLM 216
G +EAR+VF MP +++SWN L+AA +G EA +++ + I+ ++
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 217 GGFVKRKMLGAARKLFDKMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
++ RK FD M + + +I + G S A+++ + P +
Sbjct: 526 TACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 272 F-TWTAMVSGYVQNGMLD----EARTFFDQMPQKN 301
W A++SG +G ++ A F +P+ +
Sbjct: 586 AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----------SSVSYNAMISGYLR 97
++K+ ++L W +IS NG + L++F+ M R ++ A++ Y
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 98 NARF--SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLS 155
++ L + FD L + N ++T Y + + +AR++F +MP D VSWNA+++
Sbjct: 436 GQQYHAQLLKIGFDS----SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 156 GYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSD----- 206
Q+G+ EA +V+ +M K + I+ +L A H G +++ + FDS
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 207 ------WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDGDMS-- 257
LI C G F A + + + + W ++SG G+M
Sbjct: 552 PGADHYARLIDLLCRSGKF------SDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 258 --QAKNLFDQSPHQD 270
A LF P D
Sbjct: 606 IIAADKLFGLIPEHD 620
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 103/273 (37%), Gaps = 70/273 (25%)
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----------- 462
+L+L + +HG ++ G++ + N L+ +Y K + A +F+ I E
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 463 ----------------------KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 500
+D V +N MI G++ + G A+ +F MK G KPD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 501 ITMVGVLSACS------------HAGLIDRGTEYFYSMNKD----YSVTPSSKHYTCMID 544
T VL+ + HA + G Y S++ YS SS
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL----- 203
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV---FKMEPHN 601
L A+ + + E SW ++ +G +LGE+ E + K+ +N
Sbjct: 204 -------LHSARKVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 602 SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
+ + + Y G + +A M RM G++
Sbjct: 256 A-----MISGYVNRGFYQEALEMVRRMVSSGIE 283
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/648 (40%), Positives = 382/648 (58%), Gaps = 42/648 (6%)
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 223
DEAREVF Q+P + + ++ Y + R+ +A LFD +++SWN ++ G V+
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 283
+ A KLFD+M R VVSW M++G + G + QA+ LF Q P +D W +MV GY+Q
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN------ 337
G +D+A F QMP KN IS+ M+ G Q+ + A +LF+ M + S +
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 338 ---------------------------------TMITGYGQNGDIAQARKLFDMMPQRDC 364
++IT Y I +RK+FD
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
W A++SGY+ +E+AL++F + R+ N+STF+ L++C+ + L+ GK++HG
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
VK G ET FVGN+L+ MY G++ +A VF I +K +VSWN++I G A+HG GK A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS-VTPSSKHYTCMI 543
++F M + +PDEIT G+LSACSH G +++G + FY M+ + + +HYTCM+
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMV 471
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
D+LGR G+L+EA++L+ M +P W ALL A R+H + + GEKAA +F ++ +S
Sbjct: 472 DILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSA 531
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 663
YVLLSN+YA++GRW++ +R +M+ G+ K G SWV ++ K H+F GD P R
Sbjct: 532 AYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSR 589
Query: 664 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 723
IY LE L K++ GY + LHDVE+E+KE ML YHSE+LA+AFG++ G +
Sbjct: 590 IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVT 649
Query: 724 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
V+KNLRVCEDCH IK IS +VGR I+LRD RFHHF G CSCGDYW
Sbjct: 650 VMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/624 (25%), Positives = 274/624 (43%), Gaps = 99/624 (15%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
+I H+ + D A VFN +P Y MI+GY R+ R A +LFD+MP RD+VSW
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
N M++G V + A +LFD MP++ VVSW AM++G ++G D+A +FYQMP K+
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 180 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
+WN ++ Y+ G++++A +LF +ISW ++ G + + G A LF M
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 240 VVSWN---------------------------------------TMISGYAQDGDMSQAK 260
+ S + ++I+ YA + ++
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS----N 316
+FD+ H+ V WTA++SGY N ++A + F M + + + + A + S
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 317 KMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
+D +E+ + + N+++ Y +G++ A +F + ++ VSW +II
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 432
G AQ G + A +F ++ R + + TF+ LS C+ LE G+++
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL----------- 449
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 492
Y+ I ++ + + M+ R G K+A + E M
Sbjct: 450 ----------FYYMSSGINHI--------DRKIQHYTCMVDILGRCGKLKEAEELIERMV 491
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHYTCMIDLLGRAGR 551
VKP+E+ + +LSAC +DRG + ++ N D + SS Y + ++ AGR
Sbjct: 492 ---VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLD---SKSSAAYVLLSNIYASAGR 545
Query: 552 LEEAQDL----MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 607
L +N + P +SW + G K E +PH S +Y
Sbjct: 546 WSNVSKLRVKMKKNGIMKKPGSSWVVIRG------------KKHEFFSGDQPHCSRIYEK 593
Query: 608 LSNLYAASGRWADAGNMRSRMRDV 631
L L A + RS + DV
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDV 617
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 176/387 (45%), Gaps = 64/387 (16%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + ++ W +++ R+G D A R+F MP + + ++N+M+ GYL+ + A L
Sbjct: 122 EMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKL 181
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----------PQKDVVSWNA----- 152
F +MP ++++SW M+ G +N R G+A LF +M P V++ A
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 153 ------------------------MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY 188
+++ YA ++R+VF + H+ W LL+ Y
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 189 VHNGRIEEACRLFD---------SKSDWELISWNCLMGGFVK--RKMLGAARKLFDKMHV 237
N + E+A +F ++S + +C G + ++M G A KL +
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET-- 359
Query: 238 RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
D N+++ Y+ G+++ A ++F + + + +W +++ G Q+G A F QM
Sbjct: 360 -DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 298 PQKN----EISYNAMVAGYVQSNKMDMARELFEAMPS------RNVSSWNTMITGYGQNG 347
+ N EI++ +++ ++ R+LF M S R + + M+ G+ G
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCG 478
Query: 348 DIAQARKLFD-MMPQRDCVSWAAIISG 373
+ +A +L + M+ + + + W A++S
Sbjct: 479 KLKEAEELIERMVVKPNEMVWLALLSA 505
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP---- 112
W ++S + N + AL +F+ M R S + + + L + D +M
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 113 ----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
+ D N ++ Y + + DA +F + +K +VSWN+++ G AQ+G A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 169 VFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSKS------DWELISWNCLMGG 218
+F QM N I++ GLL+A H G +E+ +LF S D ++ + C++
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 219 FVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAK 260
+ L A +L ++M V+ + + W ++S D+ + +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 290/763 (38%), Positives = 413/763 (54%), Gaps = 43/763 (5%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTM------PRRSSVSYNAMISGYLRNARF--- 101
D + WN +I ++ NG + L +F M P + + G + + R
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 102 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG 161
+ A L V N ++ Y R R L DAR++FD M DVVSWN+++ YA+ G
Sbjct: 149 AHALSLVTGFISNVFVG-NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 162 YADEAREVFYQMPHKNAISWNGLLAAYV---------HNGRIEEACRLFDSKSDWELISW 212
A E+F +M ++ + + V H+ + C S+ +
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ--- 269
NCL+ + K M+ A +F M V+DVVSWN M++GY+Q G A LF++ +
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 270 -DVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL 324
DV TW+A +SGY Q G+ EA QM + NE++ ++++G + +E+
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 325 FEAMPSRNVS-----------SWNTMITGYGQNGDIAQARKLFDMMP--QRDCVSWAAII 371
+ N +I Y + + AR +FD + +RD V+W +I
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 372 SGYAQTGHYEEALNMFIEI-KRDGES-LNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
GY+Q G +AL + E+ + D ++ N T SCAL CA +AAL +GKQIH ++
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 430 YE-TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 488
FV N L+ MY KCGSI +A VF+ + K+ V+W +++ GY HG+G++AL +F
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 489 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 548
+ M+ IG K D +T++ VL ACSH+G+ID+G EYF M + V+P +HY C++DLLGR
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGR 627
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 608
AGRL A L+ MP EPP W A L RIHG ELGE AAE + ++ ++ G Y LL
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 609 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 668
SNLYA +GRW D +RS MR GV+K G SWVE F VGD HP IY L
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Query: 669 EELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNL 728
+ +++ GYV T LHDV++EEK+ +L HSEKLA+A+GILT P G IR+ KNL
Sbjct: 748 LDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNL 807
Query: 729 RVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
RVC DCH A ++S+I+ IILRDS RFHHF G CSC YW
Sbjct: 808 RVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 406/713 (56%), Gaps = 18/713 (2%)
Query: 76 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 135
+ +P + YN ++ Y + AR +FD++PQ +L SWN +L Y + + +
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 136 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYVH 190
F+ +P +D V+WN ++ GY+ +G A + + M + ++ +L
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 191 NGRIEEACRLFDS--KSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 246
NG + ++ K +E L+ + L+ + + A+K+F + R+ V +N++
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 247 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNE 302
+ G G + A LF + +D +W AM+ G QNG+ EA F +M + ++
Sbjct: 212 MGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 303 ISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDM 358
+ +++ ++ +++ + N + + +I Y + + A+ +FD
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
M Q++ VSW A++ GY QTG EEA+ +F++++R G + T A+S CA++++LE G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
Q HG+ + +G V N+L+ +Y KCG I ++ +F + +D VSW M++ YA+
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 479 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 538
G + + +F+ M G+KPD +T+ GV+SACS AGL+++G YF M +Y + PS H
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 539 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
Y+CMIDL R+GRLEEA + MPF P A W LL A R GN E+G+ AAE + +++
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
Query: 599 PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFH 658
PH+ Y LLS++YA+ G+W +R MR+ V+K G SW++ + K+H F+ D
Sbjct: 571 PHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESS 630
Query: 659 PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPA 718
P D+IYA LEEL+ K+ GY T V HDVEE K ML YHSE+LA+AFG++ +P+
Sbjct: 631 PYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPS 690
Query: 719 GRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
G+PIRV KNLRVC DCHNA KHIS + GR I++RD+ RFH F +G CSCGD+W
Sbjct: 691 GQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 222/491 (45%), Gaps = 63/491 (12%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
+ P+L WN ++ + + G F +P R V++N +I GY + A +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 109 DKMPQRDL------VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW----NAMLSGYA 158
+ M RD V+ ML N + +++ + + S+ + +L YA
Sbjct: 127 NTM-MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
G +A++VFY + +N + +N L+ + G IE+A +LF + +SW ++ G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKG 244
Query: 219 FVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNL---FDQSPHQD- 270
+ + A + F +M V+ D + +++ G +++ K + ++ QD
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM-- 328
++ +A++ Y + L A+T FD+M QKN +S+ AMV GY Q+ + + A ++F M
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 329 ---------------PSRNVSSW----------------------NTMITGYGQNGDIAQ 351
NVSS N+++T YG+ GDI
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
+ +LF+ M RD VSW A++S YAQ G E + +F ++ + G + T + +S C+
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 412 IAALELGKQIHGQVVKTGYETGCFVG--NALLGMYFKCGSIGEANDVFEGIE-EKDVVSW 468
+E G++ + +++ + Y +G + ++ ++ + G + EA G+ D + W
Sbjct: 485 AGLVEKGQR-YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 469 NTMIAGYARHG 479
T+++ G
Sbjct: 544 TTLLSACRNKG 554
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 155/371 (41%), Gaps = 71/371 (19%)
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 320
N+ P+ + F + +V Y AR FD++PQ N S+N ++ Y ++ +
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 321 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 380
FE +P R+ +WN +I GY +G + A K ++ M RD +
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSA-------------- 135
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
+L R T L + + LGKQIHGQV+K G+E+ VG+ L
Sbjct: 136 ---------------NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 441 LGMYFKCGSIGEANDVFEGIE------------------------------EKDVVSWNT 470
L MY G I +A VF G++ EKD VSW
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAA 240
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
MI G A++G K+A+ F MK G+K D+ VL AC G I+ G + + +
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-- 298
Query: 531 SVTPSSKHY---TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
T H + +ID+ + L A+ + M + SW A++ +G T
Sbjct: 299 --TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRA 352
Query: 588 EKAAEMVFKME 598
E+A ++ M+
Sbjct: 353 EEAVKIFLDMQ 363
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N +++ + + G D + R+FN M R +VS+ AM+S Y + R LFDKM Q L
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 118 SWNVMLTGYV----RNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEARE 168
V LTG + R + +R F M + + ++ M+ ++++G +EA
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 169 VFYQMPH-KNAISWNGLLAAYVHNGRIE 195
MP +AI W LL+A + G +E
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLE 557
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/575 (41%), Positives = 352/575 (61%), Gaps = 40/575 (6%)
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
V +V WN ++ YA+ G + A+ +FD+ P++D+ +W MV+GY + G+L+EAR FD+
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 297 MPQKNEISYNAMVAGYVQSNKMDMARELFEAM-------PSRNVSS-------------- 335
M +K+ S+ AMV GYV+ ++ + A L+ M P+ S
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 336 -------------------WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQ 376
W++++ YG+ G I +AR +FD + ++D VSW ++I Y +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 377 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
+ + E ++F E+ E N TF+ L+ CAD+ ELGKQ+HG + + G++ F
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 496
++L+ MY KCG+I A V +G + D+VSW ++I G A++G +AL F+ + G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 497 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 556
KPD +T V VLSAC+HAGL+++G E+FYS+ + + ++ +S HYTC++DLL R+GR E+ +
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 557 DLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 616
++ MP +P W ++LG +GN +L E+AA+ +FK+EP N YV ++N+YAA+G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 617 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 676
+W + G MR RM+++GV K G SW E++ K H F D HP ++I FL EL KM+
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 677 REGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHN 736
EGYV +T LVLHDVE+E+KE L YHSEKLAVAF IL+ G I+V KNLR C DCH
Sbjct: 597 EEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHG 656
Query: 737 AIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
AIK IS I R I +RDS RFH F G CSCGDYW
Sbjct: 657 AIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 215/486 (44%), Gaps = 68/486 (13%)
Query: 116 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 175
+V WN +L Y + L DAR++FD MP +D+ SWN M++GYA+ G +EAR++F +M
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 176 KNAISWNGLLAAYVHNGRIEEACRLFD-----SKSDWELISWNCLMGGFVKRKMLGAARK 230
K++ SW ++ YV + EEA L+ S + + + + K + ++
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 231 LFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 285
+ + VR D V W++++ Y + G + +A+N+FD+ +DV +WT+M+ Y ++
Sbjct: 240 IHGHI-VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 286 MLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----N 337
E + F ++ + NE ++ ++ ++ +++ M + +
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 338 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+++ Y + G+I A+ + D P+ D VSW ++I G AQ G +EAL F + + G
Sbjct: 359 SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKP 418
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+ TF LS C H +V+ G E F
Sbjct: 419 DHVTFVNVLSACT-----------HAGLVEKGLE------------------------FF 443
Query: 458 EGIEEKDVVS-----WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 512
I EK +S + ++ AR G +Q V M +KP + VL CS
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP---MKPSKFLWASVLGGCST 500
Query: 513 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP----FEPPA 568
G ID E + K P + Y M ++ AG+ EE + + M + P
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVT--YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPG 558
Query: 569 ASWGAL 574
+SW +
Sbjct: 559 SSWTEI 564
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 193/440 (43%), Gaps = 36/440 (8%)
Query: 86 VSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 145
V +N ++ Y + AR +FD+MP RDL SWNVM+ GY L +AR+LFD M +K
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC------- 198
D SW AM++GY + +EA ++ M N + C
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 199 --RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 256
+ + D + + W+ LM + K + AR +FDK+ +DVVSW +MI Y +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 257 SQAKNLFD------QSPHQDVFTWTAMVSGYVQNGMLDE------ARTFFDQMPQKNEIS 304
+ +LF + P++ F + L + R FD +
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY----SFA 356
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----P 360
+++V Y + ++ A+ + + P ++ SW ++I G QNG +A K FD++
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 361 QRDCVSWAAIISGYAQTGHYEEALNMFIEI-KRDGESLNRSTFSCALSTCADIAALELGK 419
+ D V++ ++S G E+ L F I ++ S ++C + A E
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE--- 473
Query: 420 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIG---EANDVFEGIEEKDVVSWNTMIAGYA 476
Q+ + + + F+ ++LG G+I EA IE ++ V++ TM YA
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 533
Query: 477 RHGFGKQALMVFESMKTIGV 496
G ++ + + M+ IGV
Sbjct: 534 AAGKWEEEGKMRKRMQEIGV 553
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 176/406 (43%), Gaps = 71/406 (17%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM 111
P ++ WN+++ + + G A +VF+ MP R S+N M++GY AR LFD+M
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 112 PQRDLVSWNVMLTGYVRNRRLGDA-------RRLFDSMPQ-------------------- 144
++D SW M+TGYV+ + +A +R+ +S P
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 145 -------------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
D V W++++ Y + G DEAR +F ++ K+ +SW ++ Y +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 192 GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT------ 245
R E LF EL+ + +L A L + + V + T
Sbjct: 298 SRWREGFSLFS-----ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 246 -------MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM- 297
++ Y + G++ AK++ D P D+ +WT+++ G QNG DEA +FD +
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 298 ---PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-----WNTMITGYGQNGDI 349
+ + +++ +++ + ++ E F ++ ++ S + ++ ++G
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 350 AQARKLFDMMPQRDC-VSWAAIISGYAQTGHY---EEALNMFIEIK 391
Q + + MP + WA+++ G + G+ EEA +I+
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
ST+ + C+ ALE GK++H + +G+ G + N LL MY KCGS+ +A VF+
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
+ +D+ SWN M+ GYA G ++A +F+ M
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/738 (36%), Positives = 414/738 (56%), Gaps = 41/738 (5%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYN-AMISGYLRNARFSLARDL 107
+++ D+ WN +IS + R G+ +R F+ S ++ + L+ R + +
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK 171
Query: 108 FDKMPQRDLVSWNVMLTG-----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ + W+V + Y R + +G+AR LFD MP +D+ SWNAM+SGY Q+G
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 163 ADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL----FDSKSDWELISWNCLMGG 218
A EA + + ++++ LL+A G + + EL N L+
Sbjct: 232 AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTW 274
+ + L +K+FD+M+VRD++SWN++I Y + +A +LF + D T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
++ S Q G + R+ V G+ L + +++
Sbjct: 352 ISLASILSQLGDIRACRS----------------VQGFT----------LRKGWFLEDIT 385
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
N ++ Y + G + AR +F+ +P D +SW IISGYAQ G EA+ M+ ++ +G
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 395 E-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
E + N+ T+ L C+ AL G ++HG+++K G FV +L MY KCG + +A
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
+F I + V WNT+IA + HG G++A+M+F+ M GVKPD IT V +LSACSH+
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 514 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 573
GL+D G F M DY +TPS KHY CM+D+ GRAG+LE A +++M +P A+ WGA
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 574 LLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
LL A R+HGN +LG+ A+E +F++EP + G +VLLSN+YA++G+W +RS G+
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Query: 634 QKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEE 693
+K G+S +EV NK+ F G+ HP + +Y L L K++ GYV + VL DVE+
Sbjct: 686 RKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVED 745
Query: 694 EEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRD 753
+EKEH+L HSE+LA+AF ++ PA IR+ KNLRVC DCH+ K ISKI R II+RD
Sbjct: 746 DEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRD 805
Query: 754 SHRFHHFNEGICSCGDYW 771
S+RFHHF G+CSCGDYW
Sbjct: 806 SNRFHHFKNGVCSCGDYW 823
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 211/485 (43%), Gaps = 98/485 (20%)
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD--- 264
+L++ C +G + AR FD + RDV +WN MISGY + G+ S+ F
Sbjct: 91 KLVNLYCYLGN------VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 265 ----QSPHQ------------------------------DVFTWTAMVSGYVQNGMLDEA 290
+P DV+ +++ Y + + A
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 291 RTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL---FEAMPSRNVSSW----------- 336
R FD+MP ++ S+NAM++GY QS A L AM S V S
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 337 ---------------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 375
N +I Y + G + +K+FD M RD +SW +II Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 376 QTGHYEEALNMFIEIKR---DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YE 431
A+++F E++ + L + + LS DI A + + G ++ G +
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC---RSVQGFTLRKGWFL 381
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
+GNA++ MY K G + A VF + DV+SWNT+I+GYA++GF +A+ ++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 492 KTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 550
+ G + ++ T V VL ACS AG + +G + + K+ + T + D+ G+ G
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCG 500
Query: 551 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK------MEPHNSGM 604
RLE+A L +P + W L+ HG+ GEKA M+FK ++P +
Sbjct: 501 RLEDALSLFYQIP-RVNSVPWNTLIACHGFHGH---GEKAV-MLFKEMLDEGVKPDHITF 555
Query: 605 YVLLS 609
LLS
Sbjct: 556 VTLLS 560
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 139/273 (50%), Gaps = 17/273 (6%)
Query: 313 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
+QS K AR L + +NV ++ Y G++A AR FD + RD +W +IS
Sbjct: 67 LQSAKCLHAR-LVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 373 GYAQTGHYEEALNMF-IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
GY + G+ E + F + + G + + TF L C + G +IH +K G+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
+V +L+ +Y + ++G A +F+ + +D+ SWN MI+GY + G K+AL + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNK--DYSVTPSSKHYTCMIDLLGR 548
+ + D +T+V +LSAC+ AG +RG T + YS+ + + S+K +IDL
Sbjct: 243 RAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK----LIDLYAE 294
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 581
GRL + Q + M + SW +++ A ++
Sbjct: 295 FGRLRDCQKVFDRM-YVRDLISWNSIIKAYELN 326
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
L+ K +H ++V + + L+ +Y G++ A F+ I+ +DV +WN MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 475 YARHGFGKQALMVFES-MKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK----D 529
Y R G + + F M + G+ PD T VL AC +ID + ++ D
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLALKFGFMWD 184
Query: 530 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
V S +I L R + A+ L MP SW A++ GN +
Sbjct: 185 VYVAAS------LIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAK 233
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 291/839 (34%), Positives = 446/839 (53%), Gaps = 129/839 (15%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF-------- 108
+ V S+ + N H +F+ P R SY +++ G+ R+ R A+ LF
Sbjct: 35 FGTVSSSRLYNAH-----NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 109 ------------------DKMPQR-------------DLVSWNVMLTGYVRNRRLGDARR 137
D++ R D+ ++ Y++ D R+
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWN---GLLAAYVH 190
+FD M +++VV+W ++SGYA+N DE +F +M ++ N+ ++ G+LA
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 191 NGR-IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 249
GR ++ + + D + N L+ ++K + AR LFDK V+ VV+WN+MISG
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 250 YAQDGDMSQAKNL------------------------------FDQSPHQDVFTW----- 274
YA +G +A + F + H V +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 275 ----TAMVSGYVQ-NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM- 328
TA++ Y + MLD R F + N +S+ AM++G++Q++ + A +LF M
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 329 ----------------------PS------------RNVSSWNTMITGYGQNGDIAQARK 354
PS R+ + ++ Y + G + +A K
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI-A 413
+F + +D V+W+A+++GYAQTG E A+ MF E+ + G N TFS L+ CA A
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
++ GKQ HG +K+ ++ V +ALL MY K G+I A +VF+ EKD+VSWN+MI+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
GYA+HG +AL VF+ MK VK D +T +GV +AC+HAGL++ G +YF M +D +
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
P+ +H +CM+DL RAG+LE+A ++ NMP + W +L A R+H TELG AAE
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 594 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 653
+ M+P +S YVLLSN+YA SG W + +R M + V+K GYSW+EV+NK + F
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLA 749
Query: 654 GDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 713
GD HP KD+IY LE+L +++ GY T VL D+++E KE +L HSE+LA+AFG+
Sbjct: 750 GDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGL 809
Query: 714 LTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHF-NEGICSCGDYW 771
+ P G P+ +IKNLRVC DCH IK I+KI R I++RDS+RFHHF ++G+CSCGD+W
Sbjct: 810 IATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 180/358 (50%), Gaps = 30/358 (8%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLF 108
+++ W +IS ++N + A+ +F+ M R+ + +Y+ +++ + + +
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 109 DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
+R +L YV+ ++ +A ++F + KD+V+W+AML+GYAQ G + A +
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 169 VFYQMP----HKNAISWNGLL-AAYVHNGRIEEACRL----FDSKSDWELISWNCLMGGF 219
+F ++ N +++ +L N + + + S+ D L + L+ +
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 220 VKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWT 275
K+ + +A ++F + +D+VSWN+MISGYAQ G +A ++F + + V T+
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPS 330
+ + G+++E +FD M + +I+ + MV Y ++ +++ A ++ E MP+
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 331 RNVSS-WNTMITG-----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
S+ W T++ + G +A A K+ M P+ D ++ + + YA++G ++E
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLA-AEKIIAMKPE-DSAAYVLLSNMYAESGDWQE 716
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLR-----NARFSL 103
+ D D++ W+ +++ + + G ++A+++F + + S L NA
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 104 ARDL--FDKMPQRD--LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
+ F + D L + +LT Y + + A +F +KD+VSWN+M+SGYAQ
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD 202
+G A +A +VF +M + + +++ G+ AA H G +EE + FD
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/745 (36%), Positives = 407/745 (54%), Gaps = 52/745 (6%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYL----------RN 98
V+ PD+ +N ++ N S+L VF + + + + N+ + R
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 99 ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
R + + D L+ N++ Y + R+ DAR++FD MP+KD + WN M+SGY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIV-KMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 159 QNGYADEAREVFYQMPHKNAISWNG-----LLAAYVHNGRIEEACRLFDSKSDWELISWN 213
+N E+ +VF + +++ + +L A + ++ + S +
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 214 CLMGGFVK------RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
++ GF+ + +G+A LF + D+V++N MI GY +G+ + +LF +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSA--LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE-- 312
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGY-VQSNKMDMARELFE 326
+ +G + T +P + + GY ++SN + A
Sbjct: 313 -------------LMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHA----- 354
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
S + T Y + +I ARKLFD P++ SW A+ISGY Q G E+A+++
Sbjct: 355 -------SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
F E+++ S N T +C LS CA + AL LGK +H V T +E+ +V AL+GMY K
Sbjct: 408 FREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAK 467
Query: 447 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
CGSI EA +F+ + +K+ V+WNTMI+GY HG G++AL +F M G+ P +T + V
Sbjct: 468 CGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
L ACSHAGL+ G E F SM Y PS KHY CM+D+LGRAG L+ A + M EP
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP 587
Query: 567 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 626
++ W LLGA RIH +T L +E +F+++P N G +VLLSN+++A + A +R
Sbjct: 588 GSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQ 647
Query: 627 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 686
+ + K GY+ +E+ H FT GD HP+ IY LE+L+ KMR GY T+L
Sbjct: 648 TAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETEL 707
Query: 687 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVG 746
LHDVEEEE+E M+K HSE+LA+AFG++ G IR+IKNLRVC DCH K ISKI
Sbjct: 708 ALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITE 767
Query: 747 RLIILRDSHRFHHFNEGICSCGDYW 771
R+I++RD++RFHHF +G+CSCGDYW
Sbjct: 768 RVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 151/383 (39%), Gaps = 91/383 (23%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVF------------NTMPRRSSVSYNAMI--- 92
+ + PD++ +N +I + NG + +L +F +T+ VS + M+
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA 340
Query: 93 -------SGYLRNARFSL--------------ARDLFDKMPQRDLVSWNVMLTGYVRNRR 131
S +L +A S AR LFD+ P++ L SWN M++GY +N
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 132 LGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAR---EVFYQMPHKNAISWN-G 183
DA LF M + + V+ +LS AQ G + ++ +++I +
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 184 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 243
L+ Y G I EA RLFD + ++W
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTW------------------------------- 489
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
NTMISGY G +A N+F + + + T+ ++ G++ E F+ M
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 300 KNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQAR 353
+ Y MV ++ + A + EAM SS W T++ + D AR
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 354 ----KLFDMMPQRDCVSWAAIIS 372
KLF++ P D V + ++S
Sbjct: 610 TVSEKLFELDP--DNVGYHVLLS 630
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/745 (34%), Positives = 423/745 (56%), Gaps = 37/745 (4%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR-------FSLARDLFDK 110
N +IS G+ D A +F+ M R ++S+N++ + Y +N FSL R D+
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDA------RRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
+ VS + + G+V +++ G + FDS+ V N +L YA G +
Sbjct: 259 V-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV----VCVCNTLLRMYAGAGRSV 313
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWN-----CL 215
EA VF QMP K+ ISWN L+A++V++GR +A C + S +++ C
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 373
Query: 216 MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
F ++ + + + ++ N ++S Y + G+MS+++ + Q P +DV W
Sbjct: 374 TPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432
Query: 276 AMVSGYVQNGMLDEARTFFDQM----PQKNEISY-NAMVAGYVQSNKMDMARELFEAMPS 330
A++ GY ++ D+A F M N I+ + + A + + ++ + L + S
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 331 RNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
S N++IT Y + GD++ ++ LF+ + R+ ++W A+++ A GH EE L +
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
+++ G SL++ +FS LS A +A LE G+Q+HG VK G+E F+ NA MY K
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 447 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
CG IGE + + + SWN +I+ RHG+ ++ F M +G+KP +T V +
Sbjct: 613 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
L+ACSH GL+D+G Y+ + +D+ + P+ +H C+IDLLGR+GRL EA+ + MP +P
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 732
Query: 567 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 626
W +LL + +IHGN + G KAAE + K+EP + +YVL SN++A +GRW D N+R
Sbjct: 733 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792
Query: 627 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 686
+M ++K SWV++++K+ F +GD HP+ IYA LE++ ++ GYV+ T
Sbjct: 793 QMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQ 852
Query: 687 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVG 746
L D +EE+KEH L HSE+LA+A+ +++ P G +R+ KNLR+C DCH+ K +S+++G
Sbjct: 853 ALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIG 912
Query: 747 RLIILRDSHRFHHFNEGICSCGDYW 771
R I+LRD +RFHHF G+CSC DYW
Sbjct: 913 RRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 270/576 (46%), Gaps = 63/576 (10%)
Query: 64 HMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVML 123
+ + G A +F+ MP R+ VS+N M+SG +R + + F KM + + ++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 124 TGYVRNRRLGDARRLFDSMPQ-----------KDVVSWNAMLSGYAQNGYADEAREVFYQ 172
V G + +F Q DV A+L Y G +R+VF +
Sbjct: 62 ASLVT--ACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEACRLFD---------SKSDWELISWNCLMGGFVK-- 221
MP +N +SW L+ Y G EE ++ +++ L+ +C G +K
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE 176
Query: 222 ---RKMLGAARK--LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
R+++G K L K+ V N++IS G++ A +FDQ +D +W +
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVE-----NSLISMLGSMGNVDYANYIFDQMSERDTISWNS 231
Query: 277 MVSGYVQNGMLDEA-------RTFFDQMPQKNEISYNAMVAGYVQSNKMD------MARE 323
+ + Y QNG ++E+ R F D++ +S V G+V K + +
Sbjct: 232 IAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 324 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
F+++ V NT++ Y G +A +F MP +D +SW ++++ + G +A
Sbjct: 291 GFDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
L + + G+S+N TF+ AL+ C E G+ +HG VV +G +GNAL+ M
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 406
Query: 444 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
Y K G + E+ V + +DVV+WN +I GYA +AL F++M+ GV + IT+
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466
Query: 504 VGVLSACSHAG-LIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
V VLSAC G L++RG + Y ++ + K+ +I + + G L +QDL
Sbjct: 467 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNG 524
Query: 562 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
+ +W A+L A+ HG+ GE+ ++V KM
Sbjct: 525 LD-NRNIITWNAMLAANAHHGH---GEEVLKLVSKM 556
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
MY K G + A +F+ + ++ VSWNTM++G R G + + F M +G+KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ +++AC +G + R + + T ++ L G G + ++ + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 563 PFEPPAASWGALL 575
P + SW +L+
Sbjct: 121 P-DRNVVSWTSLM 132
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 479 bits (1234), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/655 (38%), Positives = 383/655 (58%), Gaps = 18/655 (2%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVH 190
A +F ++ + +++ WN M G+A + A +++ M N+ ++ +L +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 191 NGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 246
+ +E ++ D +L L+ +V+ L A K+FDK RDVVS+ +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 247 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----E 302
I GYA G + A+ LFD+ P +DV +W AM+SGY + G EA F M + N E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 303 ISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDM 358
+ +V+ QS +++ R++ + N+ N +I Y + G++ A LF+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
+P +D +SW +I GY Y+EAL +F E+ R GE+ N T L CA + A+++G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 419 KQIHGQVVK--TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 476
+ IH + K G + +L+ MY KCG I A+ VF I K + SWN MI G+A
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 477 RHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 536
HG + +F M+ IG++PD+IT VG+LSACSH+G++D G F +M +DY +TP
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 537 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 596
+HY CMIDLLG +G +EA++++ M EP W +LL A ++HGN ELGE AE + K
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 597 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 656
+EP N G YVLLSN+YA++GRW + R+ + D G++KV G S +E+ + +H+F +GD
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 657 FHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTI 716
FHP IY LEE+++ + + G+V T VL ++EEE KE L++HSEKLA+AFG+++
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 686
Query: 717 PAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
G + ++KNLRVC +CH A K ISKI R II RD RFHHF +G+CSC DYW
Sbjct: 687 KPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 196/399 (49%), Gaps = 26/399 (6%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLA 104
+++P+LL WN + H + SAL+++ M +S ++ ++ ++ F
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 105 RDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
+ + + + DL +++ YV+N RL DA ++FD P +DVVS+ A++ GYA
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 220
GY + A+++F ++P K+ +SWN +++ Y G +EA LF + M V
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 221 KRKMLGAARKLFDKMHV--------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
+ +L ++H+ ++ N +I Y++ G++ A LF++ P++DV
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM 328
+W ++ GY + EA F +M + N+++ +++ +D+ R + +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 329 PSR-----NVSSWNT-MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
R N SS T +I Y + GDI A ++F+ + + SW A+I G+A G +
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
+ ++F +++ G + TF LS C+ L+LG+ I
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 166/330 (50%), Gaps = 26/330 (7%)
Query: 88 YNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 147
+ ++IS Y++N R A +FDK P RD+VS+ ++ GY + +A++LFD +P KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLF-- 201
VSWNAM+SGYA+ G EA E+F M N + +++A +G IE ++
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 202 --DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 259
D L N L+ + K L A LF+++ +DV+SWNT+I GY +A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 260 KNLFD------QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA------ 307
LF ++P DV T +++ G +D R + ++ + NA
Sbjct: 352 LLLFQEMLRSGETP-NDV-TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 308 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRD 363
++ Y + ++ A ++F ++ +++SSWN MI G+ +G + LF M Q D
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 364 CVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
+++ ++S + +G + ++F + +D
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/836 (34%), Positives = 445/836 (53%), Gaps = 117/836 (13%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSY--------------- 88
D++ + + WN +IS + + G SA R+F++M R + ++
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 89 ----------------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY 126
+ ++S + ++ S AR +F++M R+ V+ N ++ G
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 127 VRNRRLGDARRLF---DSMPQKDVVSWNAMLSGYAQNGYADE-----AREVFYQMPHKNA 178
VR + +A +LF +SM S+ +LS + + A+E REV +
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 179 ISW-----NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
+ + NGL+ Y G I +A R+F +D + +SWN ++ G + A + +
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 234 KMHVRDVVSWN-TMISGYAQDGDMSQAKNLFDQSPHQD---------VFTWTAMVSGYVQ 283
M D++ + T+IS + + AK Q H + V A+++ Y +
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAK--LGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKM------------------------- 318
G L+E R F MP+ +++S+N+++ +S +
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 319 -----------DMARELFEAMPSRNV----SSWNTMITGYGQNGDIAQARKLFDMMPQR- 362
++ +++ N+ ++ N +I YG+ G++ K+F M +R
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 422
D V+W ++ISGY +AL++ + + G+ L+ ++ LS A +A LE G ++H
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 423 GQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK 482
V+ E+ VG+AL+ MY KCG + A F + ++ SWN+MI+GYARHG G+
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 483 QALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 541
+AL +FE+MK G PD +T VGVLSACSHAGL++ G ++F SM+ Y + P +H++C
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762
Query: 542 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS-RIHG-NTELGEKAAEMVFKMEP 599
M D+LGRAG L++ +D + MP +P W +LGA R +G ELG+KAAEM+F++EP
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 822
Query: 600 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 659
N+ YVLL N+YAA GRW D R +M+D V+K GYSWV +++ +H F GD HP
Sbjct: 823 ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHP 882
Query: 660 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 719
+ D IY L+EL+ KMR GYV T L+D+E+E KE +L YHSEKLAVAF + A
Sbjct: 883 DADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF---VLAAQ 939
Query: 720 R----PIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
R PIR++KNLRVC DCH+A K+ISKI GR IILRDS+RFHHF +G CSC D+W
Sbjct: 940 RSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 168/685 (24%), Positives = 274/685 (40%), Gaps = 142/685 (20%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ N +I+ ++ G SA +VF+ MP R+ VS+ ++SGY RN A
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 111 MPQRDLVSWNVMLTGYVRN-RRLGDARRLFDSMPQK---------DVVSWNAMLSGYAQN 160
M + + S +R + +G LF D V N ++S Y +
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 161 -GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK----------SDWEL 209
G A F + KN++SWN +++ Y G A R+F S + L
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 210 ISWNC-------------------------------LMGGFVKRKMLGAARKLFDKMHVR 238
++ C L+ F K L ARK+F++M R
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLF-------DQSPHQDVFTWTA--------------- 276
+ V+ N ++ G + +A LF D SP V ++
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKG 332
Query: 277 ----------------------MVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 314
+V+ Y + G + +AR F M K+ +S+N+M+ G Q
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 315 SNKMDMARELFEAMPSR---------------------------------------NVSS 335
+ A E +++M NVS
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH-YEEALNMFIEIKRDG 394
N ++T Y + G + + RK+F MP+ D VSW +II A++ EA+ F+ +R G
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ LNR TFS LS + ++ ELGKQIHG +K NAL+ Y KCG +
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 455 DVFEGI-EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
+F + E +D V+WN+MI+GY + +AL + M G + D VLSA +
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 514 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 573
++RG E ++ + + + ++D+ + GRL+ A MP + SW +
Sbjct: 633 ATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNS 690
Query: 574 LLGASRIHGNTELGEKAAEMVFKME 598
++ HG GE+A ++ M+
Sbjct: 691 MISGYARHGQ---GEEALKLFETMK 712
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 158/646 (24%), Positives = 271/646 (41%), Gaps = 126/646 (19%)
Query: 78 NTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARR 137
N +P +S+ G+ ARF +R L+ +D+ N ++ Y+ AR+
Sbjct: 3 NCVP----LSFVQSCVGHRGAARFFHSR-LYKNRLDKDVYLCNNLINAYLETGDSVSARK 57
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN--------------- 182
+FD MP ++ VSW ++SGY++NG EA VF + K I N
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Query: 183 --GLLAAYVHNGRIEEACRLFDSKSDWELIS--WNCLMGGFVKRKMLGAARKLFDKMHVR 238
G+L +G + + D+ LIS W C+ +G A F + V+
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI-------GSVGYALCAFGDIEVK 169
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----------------------------- 269
+ VSWN++IS Y+Q GD A +F +
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 270 ------------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 317
D+F + +VS + ++G L AR F+QM +N ++ N ++ G V+
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 318 MDMARELFEAMPSR--------------------------------------------NV 333
+ A +LF M S V
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
N ++ Y + G IA AR++F M +D VSW ++I+G Q G + EA+ + ++R
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
T +LS+CA + +LG+QIHG+ +K G + V NAL+ +Y + G + E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFG-KQALMVFESMKTIGVKPDEITMVGVLSACSH 512
+F + E D VSWN++I AR +A++ F + + G K + IT VLSA S
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 513 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 572
+ G + + + ++ + +I G+ G ++ + + M +W
Sbjct: 530 LSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 573 ALLGASRIHGNTELGEKAAEMVFKM----EPHNSGMYVLLSNLYAA 614
+++ + IH EL KA ++V+ M + +S MY + + +A+
Sbjct: 589 SMI-SGYIH--NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 206/439 (46%), Gaps = 34/439 (7%)
Query: 213 NCLMGGFVKRKM--LGAAR----KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
NC+ FV+ + GAAR +L+ +DV N +I+ Y + GD A+ +FD+
Sbjct: 3 NCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGY--VQSNKMDM 320
P ++ +W +VSGY +NG EA F M ++ N+ ++ +++ + S +
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 321 AREL----FEAMPSRNVSSWNTMITGYGQN-GDIAQARKLFDMMPQRDCVSWAAIISGYA 375
R++ F+ + + N +I+ Y + G + A F + ++ VSW +IIS Y+
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA--LELGKQIHGQVVKTGYETG 433
Q G A +F ++ DG TF ++T + + L +QI + K+G T
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
FVG+ L+ + K GS+ A VF +E ++ V+ N ++ G R +G++A +F M +
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 494 -IGVKPDEITMVGVLSACSHAGL-----IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
I V P+ + V +LS+ L + +G E + V ++++
Sbjct: 303 MIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN--SGMY 605
+ G + +A+ + M + + SW +++ +G +A E M H+ G +
Sbjct: 361 KCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG---CFIEAVERYKSMRRHDILPGSF 416
Query: 606 VLLSNLYA-ASGRWADAGN 623
L+S+L + AS +WA G
Sbjct: 417 TLISSLSSCASLKWAKLGQ 435
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 279/841 (33%), Positives = 423/841 (50%), Gaps = 129/841 (15%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF------DKM 111
N +I + RNG D A RVF+ + + S+ AMISG +N + A LF M
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 112 P---------------------------------QRDLVSWNVMLTGYVRNRRLGDARRL 138
P D N +++ Y L A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNG 192
F +M Q+D V++N +++G +Q GY ++A E+F +M P N ++ L+ A +G
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA--SLVVACSADG 403
Query: 193 RIEEACRLFDSKSDWELISWNCLMGG----FVKRKMLGAARKLFDKMHVRDVVSWNTMIS 248
+ +L + S N + G + K + A F + V +VV WN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 249 GYAQDGDMSQAKNLFDQ------SPHQ--------------------------------- 269
Y D+ + +F Q P+Q
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
+ + + ++ Y + G LD A + K+ +S+ M+AGY Q N D A F M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 330 SRNVSS---------------------------------------WNTMITGYGQNGDIA 350
R + S N ++T Y + G I
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
++ F+ D ++W A++SG+ Q+G+ EEAL +F+ + R+G N TF A+ +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
+ A ++ GKQ+H + KTGY++ V NAL+ MY KCGSI +A F + K+ VSWN
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
+I Y++HGFG +AL F+ M V+P+ +T+VGVLSACSH GL+D+G YF SMN +Y
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
++P +HY C++D+L RAG L A++ ++ MP +P A W LL A +H N E+GE A
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 591 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 650
A + ++EP +S YVLLSNLYA S +W R +M++ GV+K G SW+EV+N IH
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 651 FTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 710
F VGD HP D I+ + ++L + GYV +L++++ E+K+ ++ HSEKLA++
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 711 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDY 770
FG+L++PA PI V+KNLRVC DCH IK +SK+ R II+RD++RFHHF G CSC DY
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 771 W 771
W
Sbjct: 1064 W 1064
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/630 (24%), Positives = 269/630 (42%), Gaps = 61/630 (9%)
Query: 59 KVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS 118
K+ ++ G A +VF+ MP R+ ++N MI LF +M ++
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 119 WNVMLTGYVRNRRLGD----------ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
+G + R G AR L+ + VV N ++ Y++NG+ D AR
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARR 243
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
VF + K+ SW +++ N EA RLF ++ + + +L A
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF-----CDMYVLGIMPTPYAFSSVLSAC 298
Query: 229 RKLF-----DKMH--------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
+K+ +++H D N ++S Y G++ A+++F +D T+
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 276 AMVSGYVQNGMLDEARTFFDQM------PQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
+++G Q G ++A F +M P N ++ ++V + ++L
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA--SLVVACSADGTLFRGQQLHAYTT 416
Query: 330 SRNVSSWN----TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 385
+S N ++ Y + DI A F + V W ++ Y +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYF 445
+F +++ + N+ T+ L TC + LELG+QIH Q++KT ++ +V + L+ MY
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 446 KCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVG 505
K G + A D+ KDVVSW TMIAGY ++ F +AL F M G++ DE+ +
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 506 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 565
+SAC+ + G + ++ + ++ L R G++EE+ + FE
Sbjct: 597 AVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFE 650
Query: 566 PPAA----SWGALLGASRIHGNTELGEKAAEMVFKM--EPHNSGMYVLLSNLYAASGRWA 619
A +W AL+ + GN E+A + +M E ++ + S + AAS
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNN---EEALRVFVRMNREGIDNNNFTFGSAVKAAS---- 703
Query: 620 DAGNMRSRMRDVGVQKVTGY-SWVEVQNKI 648
+ NM+ + V TGY S EV N +
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLF 108
D + WN ++S ++G+ + ALRVF M R ++ ++ + + A + +
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 109 DKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
+ + S N +++ Y + + DA + F + K+ VSWNA+++ Y+++G+
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775
Query: 165 EAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDS-KSDWELIS----WNCL 215
EA + F QM H N ++ G+L+A H G +++ F+S S++ L + C+
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835
Query: 216 MGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS----QAKNLFDQSPHQD 270
+ + +L A++ +M ++ D + W T++S +M A +L + P +D
Sbjct: 836 VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEP-ED 894
Query: 271 VFTWTAMVSGY 281
T+ + + Y
Sbjct: 895 SATYVLLSNLY 905
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 326 EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 385
E M R+VSS I G + + R +F + S+AAI ++ ++E
Sbjct: 16 EPMFLRSVSSSFIFIHGVPRK---LKTRTVFPTLCGTRRASFAAISVYISEDESFQE--K 70
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADI-AALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
++ G N T L C +L+ G+++H Q++K G ++ + L Y
Sbjct: 71 RIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY 130
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
G + A VF+ + E+ + +WN MI A + +F M + V P+E T
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 564
GVL AC + E ++ + S+ +IDL R G ++ A+ + +
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 565 EPPAASWGALL 575
+ +SW A++
Sbjct: 251 K-DHSSWVAMI 260
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/760 (35%), Positives = 413/760 (54%), Gaps = 66/760 (8%)
Query: 69 HCD-----SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVML 123
HCD S L +F T N +++ Y++ A +LFD+MP+R+ VS+ +
Sbjct: 72 HCDILKKGSCLDLFAT---------NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLA 122
Query: 124 TGYVRNRRLGDARRL------------------FDSMPQKDVVSW--------------- 150
GY +G RL F S+ + ++ W
Sbjct: 123 QGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 151 --NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
A+++ Y+ G D AR VF + K+ + W G+++ YV NG E++ +L
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 209 LISWNCLMGGFVKRKM-LGAAR-------KLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 260
+ N +K + LGA ++ +V D ++ Y Q GDMS A
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSN 316
+F++ P DV W+ M++ + QNG +EA F +M + NE + ++++ G
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 317 KMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
+ +L + ++ N +I Y + + A KLF + ++ VSW +I
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 432
GY G +A +MF E R+ S+ TFS AL CA +A+++LG Q+HG +KT
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 492
V N+L+ MY KCG I A VF +E DV SWN +I+GY+ HG G+QAL + + MK
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
KP+ +T +GVLS CS+AGLID+G E F SM +D+ + P +HYTCM+ LLGR+G+L
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 553 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 612
++A L+ +P+EP W A+L AS N E ++AE + K+ P + YVL+SN+Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 613 AASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELD 672
A + +WA+ ++R M+++GV+K G SW+E Q +H F+VG HP+ I LE L+
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Query: 673 LKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRP-IRVIKNLRVC 731
+K R GYV VL D+++EEK+ L HSE+LA+A+G++ +P+ R I ++KNLR+C
Sbjct: 723 MKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRIC 782
Query: 732 EDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
DCH+A+K IS IV R +++RD +RFHHF+ G+CSCGD+W
Sbjct: 783 SDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 163/350 (46%), Gaps = 26/350 (7%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
++ + + G A +VFN MP+ V ++ MI+ + +N + A DLF +M + +V
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 120 NVMLTGYVRNRRLGDARRLFDSMP--------QKDVVSWNAMLSGYAQNGYADEAREVFY 171
L+ + +G L + + D+ NA++ YA+ D A ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 172 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGA 227
++ KN +SWN ++ Y + G +A +F ++ ++++ +G +
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 228 ARKL----FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 283
++ + + V N++I YA+ GD+ A+++F++ DV +W A++SGY
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 284 NGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VS 334
+G+ +A D M + N +++ +++G + +D +E FE+M + +
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-WAAIISGYAQTGHYEEA 383
+ M+ G++G + +A KL + +P V W A++S + E A
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFA 637
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ N +I + + D+A+++F + ++ VS+N +I GY A +F
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF-- 437
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRL-------------FDSMPQKDVVSWNAMLSGY 157
R+ + V +T + LG L + K V N+++ Y
Sbjct: 438 ---REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMY 494
Query: 158 AQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWN 213
A+ G A+ VF +M + SWN L++ Y +G +A R+ D D + +++
Sbjct: 495 AKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFL 554
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRD------VVSWNTMISGYAQDGDMSQAKNLFDQSP 267
++ G ++ ++ F+ M +RD + + M+ + G + +A L + P
Sbjct: 555 GVLSGCSNAGLIDQGQECFESM-IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIP 613
Query: 268 HQ-DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ---KNEISY 305
++ V W AM+S + + AR +++ + K+E +Y
Sbjct: 614 YEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATY 655
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/738 (34%), Positives = 417/738 (56%), Gaps = 37/738 (5%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR-------FSLARDLFDK 110
N +IS G+ D A +F+ M R ++S+N++ + Y +N FSL R D+
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDA------RRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
+ VS + + G+V +++ G + FDS+ V N +L YA G +
Sbjct: 242 V-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV----VCVCNTLLRMYAGAGRSV 296
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWN-----CL 215
EA VF QMP K+ ISWN L+A++V++GR +A C + S +++ C
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 216 MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
F ++ + + + ++ N ++S Y + G+MS+++ + Q P +DV W
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 276 AMVSGYVQNGMLDEARTFFDQM----PQKNEISY-NAMVAGYVQSNKMDMARELFEAMPS 330
A++ GY ++ D+A F M N I+ + + A + + ++ + L + S
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 331 RNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
S N++IT Y + GD++ ++ LF+ + R+ ++W A+++ A GH EE L +
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
+++ G SL++ +FS LS A +A LE G+Q+HG VK G+E F+ NA MY K
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 447 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
CG IGE + + + SWN +I+ RHG+ ++ F M +G+KP +T V +
Sbjct: 596 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
L+ACSH GL+D+G Y+ + +D+ + P+ +H C+IDLLGR+GRL EA+ + MP +P
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 715
Query: 567 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 626
W +LL + +IHGN + G KAAE + K+EP + +YVL SN++A +GRW D N+R
Sbjct: 716 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 775
Query: 627 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 686
+M ++K SWV++++K+ F +GD HP+ IYA LE++ ++ GYV+ T
Sbjct: 776 QMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQ 835
Query: 687 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVG 746
L D +EE+KEH L HSE+LA+A+ +++ P G +R+ KNLR+C DCH+ K +S+++G
Sbjct: 836 ALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIG 895
Query: 747 RLIILRDSHRFHHFNEGI 764
R I+LRD +RFHHF G+
Sbjct: 896 RRIVLRDQYRFHHFERGL 913
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 161/624 (25%), Positives = 285/624 (45%), Gaps = 66/624 (10%)
Query: 68 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP------QRDLVSWNV 121
G + +VF MP R+ VS+ +++ GY D++ M + +S +
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 122 MLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
G +++ LG ++ S + + N+++S G D A +F QM ++ I
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 180 SWNGLLAAYVHNGRIEEACRLF-------DSKSDWELISWNCLMGGFVKRKMLGAARKLF 232
SWN + AAY NG IEE+ R+F D + + + ++G +K L
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 270
Query: 233 DKMHVRDVVS-WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 291
KM VV NT++ YA G +A +F Q P +D+ +W ++++ +V +G +A
Sbjct: 271 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 330
Query: 292 TFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGY 343
M N +++ + +A + + R L + N N +++ Y
Sbjct: 331 GLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 390
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
G+ G+++++R++ MP+RD V+W A+I GYA+ ++AL F ++ +G S N T
Sbjct: 391 GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVV 450
Query: 404 CALSTC---ADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 460
LS C D+ LE GK +H +V G+E+ V N+L+ MY KCG + + D+F G+
Sbjct: 451 SVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 461 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
+ +++++WN M+A A HG G++ L + M++ GV D+ + LSA + +++ G
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 521 E--------------YFYSMNKDY----------------SVTPSSKHYTCMIDLLGRAG 550
+ + ++ D SV S + +I LGR G
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Query: 551 RLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV---FKMEPHNSGM 604
EE M M +P ++ +LL A G + G +M+ F +EP
Sbjct: 629 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 688
Query: 605 YVLLSNLYAASGRWADAGNMRSRM 628
++ +L SGR A+A S+M
Sbjct: 689 ICVI-DLLGRSGRLAEAETFISKM 711
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 263/560 (46%), Gaps = 63/560 (11%)
Query: 80 MPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF 139
MP R+ VS+N M+SG +R + + F KM + + ++ V G + +F
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVT--ACGRSGSMF 58
Query: 140 DSMPQ-----------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY 188
Q DV A+L Y G +R+VF +MP +N +SW L+ Y
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 189 VHNGRIEEACRLFD---------SKSDWELISWNCLMGGFVK-----RKMLGAARK--LF 232
G EE ++ +++ L+ +C G +K R+++G K L
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLE 175
Query: 233 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-- 290
K+ V N++IS G++ A +FDQ +D +W ++ + Y QNG ++E+
Sbjct: 176 SKLAVE-----NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 291 -----RTFFDQMPQKNEISYNAMVAGYVQSNKMD------MARELFEAMPSRNVSSWNTM 339
R F D++ +S V G+V K + + F+++ V NT+
Sbjct: 231 IFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV----VCVCNTL 285
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
+ Y G +A +F MP +D +SW ++++ + G +AL + + G+S+N
Sbjct: 286 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 345
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
TF+ AL+ C E G+ +HG VV +G +GNAL+ MY K G + E+ V
Sbjct: 346 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG-LIDR 518
+ +DVV+WN +I GYA +AL F++M+ GV + IT+V VLSAC G L++R
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 519 GTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 577
G + Y ++ + K+ +I + + G L +QDL + +W A+L A
Sbjct: 466 GKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAA 522
Query: 578 SRIHGNTELGEKAAEMVFKM 597
+ HG+ GE+ ++V KM
Sbjct: 523 NAHHGH---GEEVLKLVSKM 539
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 379/604 (62%), Gaps = 20/604 (3%)
Query: 101 FSLARDLFD-----KMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLS 155
F+L R ++ ++PQ + + + G ++ +AR+LFD +P++DVV+W +++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVG-----KIAEARKLFDGLPERDVVTWTHVIT 85
Query: 156 GYAQNGYADEAREVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC 214
GY + G EARE+F ++ KN ++W +++ Y+ + ++ A LF + ++SWN
Sbjct: 86 GYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNT 145
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
++ G+ + + A +LFD+M R++VSWN+M+ Q G + +A NLF++ P +DV +W
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW 205
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
TAMV G +NG +DEAR FD MP++N IS+NAM+ GY Q+N++D A +LF+ MP R+ +
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
SWNTMITG+ +N ++ +A LFD MP+++ +SW +I+GY + EEALN+F ++ RDG
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 395 E-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
N T+ LS C+D+A L G+QIH + K+ ++ V +ALL MY K G + A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 454 NDVFEG--IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+F+ + ++D++SWN+MIA YA HG GK+A+ ++ M+ G KP +T + +L ACS
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
HAGL+++G E+F + +D S+ +HYTC++DL GRAGRL++ + + + +
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFY 505
Query: 572 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
GA+L A +H + ++ + V + ++G YVL+SN+YAA+G+ +A MR +M++
Sbjct: 506 GAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 632 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 691
G++K G SWV+V + H F VGD HP+ + + + L +L KMR+ V+S D
Sbjct: 566 GLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTS------DA 619
Query: 692 EEEE 695
EE E
Sbjct: 620 EEAE 623
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 240/426 (56%), Gaps = 48/426 (11%)
Query: 45 NKPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLA 104
++P V P+ L I + G A ++F+ +P R V++ +I+GY++ A
Sbjct: 42 SRPRVPQPEWL-----IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA 96
Query: 105 RDLFDKMPQR-DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
R+LFD++ R ++V+W M++GY+R+++L A LF MP+++VVSWN M+ GYAQ+G
Sbjct: 97 RELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRI 156
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 223
D+A E+F +MP +N +SWN ++ A V GRI+EA LF+ +++SW ++ G K
Sbjct: 157 DKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNG 216
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 283
+ AR+LFD M R+++SWN MI+GYAQ+ + +A LF P +D +W M++G+++
Sbjct: 217 KVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIR 276
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM--------------- 328
N +++A FD+MP+KN IS+ M+ GYV++ + + A +F M
Sbjct: 277 NREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 329 --------------------PSRNVSSWNTMITG-----YGQNGDIAQARKLFD--MMPQ 361
S++V N ++T Y ++G++ ARK+FD ++ Q
Sbjct: 337 ILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 362 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
RD +SW ++I+ YA GH +EA+ M+ ++++ G + T+ L C+ +E G +
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 422 HGQVVK 427
+V+
Sbjct: 457 FKDLVR 462
Score = 203 bits (517), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 249/478 (52%), Gaps = 41/478 (8%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + +++ WN +I + ++G D AL +F+ MP R+ VS+N+M+ ++ R A +L
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
F++MP+RD+VSW M+ G +N ++ +ARRLFD MP+++++SWNAM++GYAQN DEA
Sbjct: 194 FERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 227
++F MP ++ SWN ++ ++ N + +AC LFD + +ISW ++ G+V+ K
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 228 ARKLFDKMHVRDVVSWN--TMISGYAQDGDMS------QAKNLFDQSPHQ-DVFTWTAMV 278
A +F KM V N T +S + D++ Q L +S HQ + +A++
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 279 SGYVQNGMLDEARTFFDQ--MPQKNEISYNAMVAGYVQSNKMDMARELFEAM------PS 330
+ Y ++G L AR FD + Q++ IS+N+M+A Y A E++ M PS
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLF------DMMPQRDCVSWAAIISGYAQTGHYEEAL 384
++ ++ G + + + F + +P R+ + ++ + G ++
Sbjct: 434 --AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE-EHYTCLVDLCGRAGRLKDVT 490
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY-ETGCFVGNALLGM 443
N I D L+RS + LS C + + K++ +V++TG + G +V + +
Sbjct: 491 NF---INCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYV--LMSNI 545
Query: 444 YFKCGSIGEANDVFEGIEEKDV-----VSWNTMIAGYARHGF--GKQALMVFESMKTI 494
Y G EA ++ ++EK + SW + G H F G ++ FE++ +I
Sbjct: 546 YAANGKREEAAEMRMKMKEKGLKKQPGCSW--VKVGKQNHLFVVGDKSHPQFEALDSI 601
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/816 (33%), Positives = 423/816 (51%), Gaps = 144/816 (17%)
Query: 90 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR---NRRLGDARRLFDSM---P 143
A+++ YL+ + + LF++MP RD+V WN+ML Y+ D F S P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 144 QKDVVSWNAMLSG----------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 193
+ + A +SG +A A E+ ++ N L+ Y+H+G+
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR---------NKGLSEYLHSGQ 295
Query: 194 IEEACRLF-------------------------DSKS--------------DWELISWNC 214
+ F DS + D L N
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPH 268
L+ + K + G AR +FD M RD++SWN++I+G AQ+G +A LF Q P
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 269 Q----------------------------------DVFTWTAMVSGYVQNGMLDEARTFF 294
Q D F TA++ Y +N + EA F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 295 DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----------------------- 331
++ + +++NAM+AGY QS+ +LF M +
Sbjct: 476 ER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 332 --------------NVSSWNT--MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 375
++ W + ++ Y + GD++ A+ FD +P D V+W +ISG
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
+ G E A ++F +++ G + T + + + ALE G+QIH +K F
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 436 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
VG +L+ MY KCGSI +A +F+ IE ++ +WN M+ G A+HG GK+ L +F+ MK++G
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
+KPD++T +GVLSACSH+GL+ ++ SM+ DY + P +HY+C+ D LGRAG +++A
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 556 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
++L+ +M E A+ + LL A R+ G+TE G++ A + ++EP +S YVLLSN+YAA+
Sbjct: 775 ENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 834
Query: 616 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 675
+W + R+ M+ V+K G+SW+EV+NKIH F V D + + + IY ++++ +
Sbjct: 835 SKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894
Query: 676 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 735
++EGYV T L DVEEEEKE L YHSEKLAVAFG+L+ P PIRVIKNLRVC DCH
Sbjct: 895 KQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCH 954
Query: 736 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
NA+K+I+K+ R I+LRD++RFH F +GICSCGDYW
Sbjct: 955 NAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/638 (23%), Positives = 279/638 (43%), Gaps = 114/638 (17%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR--------- 100
++P+ N +IS + + G A RVF+ MP R VS+N++++ Y +++
Sbjct: 70 ENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 101 FSLARDLFDKMPQRDLVSWNVML-----TGYV---------------------------- 127
F L R L + ++ + ML +GYV
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 128 --RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL- 184
+ ++ + + LF+ MP +DVV WN ML Y + G+ +EA ++ H + ++ N +
Sbjct: 190 YLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF-HSSGLNPNEIT 248
Query: 185 --------------------------------------LAAYVHNGRIEEACRLF----D 202
L+ Y+H+G+ + F +
Sbjct: 249 LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 203 SKSDWELISWNCLMGGFVKRKMLGAARKL--------FDKMHVRDVVSWNTMISGYAQDG 254
S + + +++ ++ VK L +++ D M + N++I+ Y +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM----LTVSNSLINMYCKLR 364
Query: 255 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKNEISYNAM 308
A+ +FD +D+ +W ++++G QNG+ EA F Q+ P + ++ + +
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT-SVL 423
Query: 309 VAGYVQSNKMDMAREL-FEAMPSRNVSS---WNTMITGYGQNGDIAQARKLFDMMPQRDC 364
A + +++++ A+ NVS +I Y +N + +A LF+ D
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDL 482
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
V+W A+++GY Q+ + L +F + + GE + T + TC + A+ GKQ+H
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
+K+GY+ +V + +L MY KCG + A F+ I D V+W TMI+G +G ++A
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
VF M+ +GV PDE T+ + A S +++G + + K + T T ++D
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK-LNCTNDPFVGTSLVD 661
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 582
+ + G +++A L + + A W A+L HG
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLAQHG 698
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/561 (24%), Positives = 252/561 (44%), Gaps = 41/561 (7%)
Query: 58 NKVISTHMRNGHCDSA-LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
N + S+ + G C A + F P R + N +IS Y + + AR +FDKMP RDL
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 117 VSWNVMLTGYVRN-----RRLGDARRLFDSMPQKDVV-----SWNAMLSGYAQNGYADEA 166
VSWN +L Y ++ + A LF + Q DVV + + ML +GY A
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQ-DVVYTSRMTLSPMLKLCLHSGYV-WA 163
Query: 167 REVFYQMPHKNAISWNGLLAA-----YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK 221
E F+ K + + +A Y+ G+++E LF+ +++ WN ++ +++
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 222 RKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLF---DQSPHQDVFTW 274
A L H + ++ + D D Q K+ D S ++
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL----FE 326
+S Y+ +G F M + +++++ M+A V+ + + + +++ +
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
++ N++I Y + AR +FD M +RD +SW ++I+G AQ G EA+ +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIA-ALELGKQIHGQVVKTGYETGCFVGNALLGMYF 445
F+++ R G ++ T + L + + L L KQ+H +K + FV AL+ Y
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 446 KCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVG 505
+ + EA +FE D+V+WN M+AGY + G + L +F M G + D+ T+
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 506 VLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 564
V C I++G + + Y++ Y + + ++D+ + G + AQ ++P
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 565 EPPAASWGALLGASRIHGNTE 585
P +W ++ +G E
Sbjct: 581 -PDDVAWTTMISGCIENGEEE 600
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 168/368 (45%), Gaps = 36/368 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR-----FS 102
++ + DL+ WN VI+ +NG A+ +F + R ++ L+ A S
Sbjct: 375 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 434
Query: 103 LARDLFDKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
L++ + + + VS ++ Y RNR + +A LF+ D+V+WNAM++GY
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYT 493
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAY---------VHNGRIEEACRLFDSKSDWEL 209
Q+ + ++F M + S + LA ++ G+ A + KS ++L
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA---YAIKSGYDL 550
Query: 210 ISW--NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-- 265
W + ++ +VK + AA+ FD + V D V+W TMISG ++G+ +A ++F Q
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 266 --SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----EISYNAMVAGYVQSNKMD 319
D FT + L++ R + N ++V Y + +D
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 320 MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYA 375
A LF+ + N+++WN M+ G Q+G+ + +LF M + D V++ ++S +
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 376 QTGHYEEA 383
+G EA
Sbjct: 731 HSGLVSEA 738
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 52 PDLLKWNKVISTHMRNG------HCDSALRVFNTMPRRSSVSYNAMISG---YLRNARFS 102
PD + W +IS + NG H S +R+ +P +++ A S L R
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
A L V + ++ Y + + DA LF + ++ +WNAML G AQ+G
Sbjct: 641 HANALKLNCTNDPFVGTS-LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 163 ADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDS-KSDW----ELISWN 213
E ++F QM + +++ G+L+A H+G + EA + S D+ E+ ++
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDGDMSQAKNL 262
CL + ++ A L + M + S + T+++ GD K +
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/736 (35%), Positives = 394/736 (53%), Gaps = 87/736 (11%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA--I 179
+++ + R + +A R+F+ + K V ++ ML G+A+ D+A + F +M + + +
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 180 SWNGLLAAYVHNGRIEEAC------RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
+N V E L S +L + L + K + + ARK+FD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 234 KMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTW--------------- 274
+M RD+VSWNT+++GY+Q+G + K++ +++ T
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 275 --------------------TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 314
TA+V Y + G L+ AR FD M ++N +S+N+M+ YVQ
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 315 SNKMDMARELFEAM------PS---------------------------------RNVSS 335
+ A +F+ M P+ RNVS
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
N++I+ Y + ++ A +F + R VSW A+I G+AQ G +ALN F +++
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
+ T+ ++ A+++ K IHG V+++ + FV AL+ MY KCG+I A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
+F+ + E+ V +WN MI GY HGFGK AL +FE M+ +KP+ +T + V+SACSH+GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
++ G + FY M ++YS+ S HY M+DLLGRAGRL EA D + MP +P +GA+L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 576 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 635
GA +IH N EKAAE +F++ P + G +VLL+N+Y A+ W G +R M G++K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 636 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 695
G S VE++N++H F G HP+ +IYAFLE+L ++ GYV T LVL VE +
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDV 733
Query: 696 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 755
KE +L HSEKLA++FG+L AG I V KNLRVC DCHNA K+IS + GR I++RD
Sbjct: 734 KEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 756 RFHHFNEGICSCGDYW 771
RFHHF G CSCGDYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 177/401 (44%), Gaps = 61/401 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
DL + + + + + A +VF+ MP R VS+N +++GY +N +A ++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 113 QRDL-------------------------VSWNVMLTG--------------YVRNRRLG 133
+ +L + M +G Y + L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYV 189
AR+LFD M +++VVSWN+M+ Y QN EA +F +M + +S G L A
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 190 HNGRIEEACRLFDSKS-----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 244
G +E R S D + N L+ + K K + A +F K+ R +VSWN
Sbjct: 349 DLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWN 407
Query: 245 TMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEAR----TFFDQ 296
MI G+AQ+G A N F Q + D FT+ ++++ + + A+
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 297 MPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 356
KN A+V Y + + +AR +F+ M R+V++WN MI GYG +G A +LF
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527
Query: 357 DMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
+ M + + V++ ++IS + +G E L F +K +
Sbjct: 528 EEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
L C+ + L +QI V K G F L+ ++ + GS+ EA VFE I+ K
Sbjct: 44 LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 525
V ++TM+ G+A+ +AL F M+ V+P +L C + G E
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 526 MNKD-YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 584
+ K +S+ + T + ++ + ++ EA+ + MP E SW ++ +G
Sbjct: 161 LVKSGFSLDLFA--MTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNG-- 215
Query: 585 ELGEKAAEMVFKMEPHN 601
+ A EMV M N
Sbjct: 216 -MARMALEMVKSMCEEN 231
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 274/779 (35%), Positives = 410/779 (52%), Gaps = 90/779 (11%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD-- 115
N +++ + + G + +VF+ + R+ VS+N++IS ++ +A + F M +
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 116 -----LVS----------------------------------WNVMLTGYVRNRRLGDAR 136
LVS N ++ Y + +L ++
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 137 RLFDSMPQKDVVSWNAMLSGYAQNGYADEA----REVFYQMPHKNAISWNGLLAAYVH-- 190
L S +D+V+WN +LS QN EA RE+ + + + + +L A H
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 191 ---NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMI 247
G+ A L + D + L+ + K + + R++FD M R + WN MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 248 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP---QKNEIS 304
+GY+Q+ +A LF + G+L + T +P + S
Sbjct: 377 AGYSQNEHDKEALLLF--------------IGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+ G+V +D R+ NT++ Y + G I A ++F M RD
Sbjct: 423 RKEAIHGFVVKRGLD-----------RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIK-----------RDGESLNRSTFSCALSTCADIA 413
V+W +I+GY + H+E+AL + +++ R N T L +CA ++
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
AL GK+IH +K T VG+AL+ MY KCG + + VF+ I +K+V++WN +I
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
Y HG G++A+ + M GVKP+E+T + V +ACSH+G++D G FY M DY V
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE-PPAASWGALLGASRIHGNTELGEKAAE 592
PSS HY C++DLLGRAGR++EA LM MP + A +W +LLGASRIH N E+GE AA+
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFT 652
+ ++EP+ + YVLL+N+Y+++G W A +R M++ GV+K G SW+E +++HKF
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771
Query: 653 VGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 712
GD HP+ +++ +LE L +MR+EGYV T VLH+VEE+EKE +L HSEKLA+AFG
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831
Query: 713 ILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
IL G IRV KNLRVC DCH A K ISKIV R IILRD RFH F G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 160/346 (46%), Gaps = 29/346 (8%)
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
V V NT+++ Y + GD +FD+ ++ +W +++S + A F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 297 MPQKN-EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW------------NTMITGY 343
M +N E S +V+ + + M L M + V ++ NT++ Y
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGL---MMGKQVHAYGLRKGELNSFIINTLVAMY 246
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
G+ G +A ++ L RD V+W ++S Q EAL E+ +G + T S
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 404 CALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
L C+ + L GK++H +K G + FVG+AL+ MY C + VF+G+ +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 463 KDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDR--- 518
+ + WN MIAGY+++ K+AL++F M ++ G+ + TM GV+ AC +G R
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 519 --GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
G +++D V + ++D+ R G+++ A + M
Sbjct: 427 IHGFVVKRGLDRDRFVQNT------LMDMYSRLGKIDIAMRIFGKM 466
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 212/493 (43%), Gaps = 49/493 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTM------PRRSSVSYNAMISGY---LRNARFSL 103
DL+ WN V+S+ +N AL M P ++S + LR +
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
A L + + + ++ Y +++ RR+FD M + + WNAM++GY+QN +
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 164 DEAREVFYQMPHK-----NAISWNGLLAAYVHNGRI--EEACRLFDSKS--DWELISWNC 214
EA +F M N+ + G++ A V +G +EA F K D + N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA---------------QDGDMSQA 259
LM + + + A ++F KM RD+V+WNTMI+GY Q+ + +
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 260 KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNAMVAGYVQS 315
K S + T ++ L + + + N + +A+V Y +
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 316 NKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAII 371
+ M+R++F+ +P +NV +WN +I YG +G+ +A L MM + + V++ ++
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
Query: 372 SGYAQTGHYEEALNMFIEIKRD-GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
+ + +G +E L +F +K D G + ++C + ++ Q+ + +
Sbjct: 626 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 431 ETGC---FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG-YARHGFGKQALM 486
+ G +G + + + G I N + E +V S ++A Y+ G +A
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLI---QLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 487 VFESMKTIGVKPD 499
V +MK GV+ +
Sbjct: 743 VRRNMKEQGVRKE 755
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 149/315 (47%), Gaps = 14/315 (4%)
Query: 274 WTAMVSGYVQNGMLDEA-RTFFDQMP---QKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
W ++ V++ +L EA T+ D + + + ++ A++ M++ +++ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 330 S-----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 384
+V+ NT++ Y + GD K+FD + +R+ VSW ++IS +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIA---ALELGKQIHGQVVKTGYETGCFVGNALL 441
F + + + T ++ C+++ L +GKQ+H ++ G E F+ N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
MY K G + + + +D+V+WNT+++ ++ +AL M GV+PDE
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T+ VL ACSH ++ G E K+ S+ +S + ++D+ ++ + +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 562 MPFEPPAASWGALLG 576
M F+ W A++
Sbjct: 364 M-FDRKIGLWNAMIA 377
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/656 (37%), Positives = 366/656 (55%), Gaps = 19/656 (2%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-------PHKNAISWNGLLAA 187
AR++FD +P+ + +WN ++ YA + F M P+K + AA
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 188 YVHNGRIEEACRLFDSKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
V + + ++ KS ++ N L+ + L +A K+F + +DVVSWN+
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQK- 300
MI+G+ Q G +A LF + +DV T ++S + L+ R + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 301 ---NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 357
N NAM+ Y + ++ A+ LF+AM ++ +W TM+ GY + D AR++ +
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 358 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK-RDGESLNRSTFSCALSTCADIAALE 416
MPQ+D V+W A+IS Y Q G EAL +F E++ + LN+ T LS CA + ALE
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 417 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA 476
LG+ IH + K G V +AL+ MY KCG + ++ +VF +E++DV W+ MI G A
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 477 RHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 536
HG G +A+ +F M+ VKP+ +T V ACSH GL+D F+ M +Y + P
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 537 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 596
KHY C++D+LGR+G LE+A + MP P + WGALLGA +IH N L E A + +
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 597 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 656
+EP N G +VLLSN+YA G+W + +R MR G++K G S +E+ IH+F GD
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 657 FHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE-KEHMLKYHSEKLAVAFGILT 715
HP +++Y L E+ K++ GY VL +EEEE KE L HSEKLA+ +G+++
Sbjct: 623 AHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 682
Query: 716 IPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
A + IRVIKNLRVC DCH+ K IS++ R II+RD +RFHHF G CSC D+W
Sbjct: 683 TEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 193/403 (47%), Gaps = 47/403 (11%)
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQK----NEISYNAM 308
+ A+ +FD+ P + F W ++ Y + F D + + N+ ++ +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 309 VAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+ + + + + + L ++ +V N++I Y GD+ A K+F + ++D
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
VSW ++I+G+ Q G ++AL +F +++ + + T LS CA I LE G+Q+
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYA-------- 476
+ + + NA+L MY KCGSI +A +F+ +EEKD V+W TM+ GYA
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 477 -----------------------RHGFGKQALMVFESMK-TIGVKPDEITMVGVLSACSH 512
++G +AL+VF ++ +K ++IT+V LSAC+
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 513 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 572
G ++ G + +S K + + + + +I + + G LE+++++ ++ + W
Sbjct: 378 VGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWS 435
Query: 573 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY-VLLSNLYAA 614
A++G +HG G +A +M +KM+ N V +N++ A
Sbjct: 436 AMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 193/445 (43%), Gaps = 67/445 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ N +I + G DSA +VF T+ + VS+N+MI+G+++ A +LF KM
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 113 QRDLVSWNVMLTGY------VRNRRLG--------------------------------- 133
D+ + +V + G +RN G
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 193
DA+RLFD+M +KD V+W ML GYA + + AREV MP K+ ++WN L++AY NG+
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 194 IEEACRLFDSKSDWELISWN--CLMGGFVKRKMLGAAR------KLFDKMHVR-DVVSWN 244
EA +F + + N L+ +GA K +R + +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----K 300
+I Y++ GD+ +++ +F+ +DVF W+AM+ G +G +EA F +M +
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKL 355
N +++ + + +D A LF M S + ++ G++G + +A K
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 356 FDMMPQRDCVS-WAAIISG---YAQTGHYEEALNMFIEI--KRDGESLNRSTFSCALSTC 409
+ MP S W A++ +A E A +E+ + DG + S L
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 410 ADIAALELGKQIHGQVVKTGYETGC 434
+++ L + H +V E GC
Sbjct: 585 ENVSEL----RKHMRVTGLKKEPGC 605
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 175/396 (44%), Gaps = 65/396 (16%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPR-------------------------- 82
+K+ D++ WN +I+ ++ G D AL +F M
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 83 RSSVSY-------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN 129
R SY NAM+ Y + A+ LFD M ++D V+W ML GY +
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 130 RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGL 184
AR + +SMPQKD+V+WNA++S Y QNG +EA VF+++ + N I+
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 185 LAAYVHNGRIEEACRLFDSKSDWELISWN-----CLMGGFVKRKMLGAARKLFDKMHVRD 239
L+A G +E R S I N L+ + K L +R++F+ + RD
Sbjct: 372 LSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFD 295
V W+ MI G A G ++A ++F + +V T+T + G++DEA + F
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 296 QMPQK-----NEISYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDI 349
QM E Y +V +S ++ A + EAMP + S W ++ + ++
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Query: 350 AQAR----KLFDMMPQRDCVSWAAIISGYAQTGHYE 381
A +L ++ P+ D + + + YA+ G +E
Sbjct: 551 NLAEMACTRLLELEPRNDG-AHVLLSNIYAKLGKWE 585
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/733 (34%), Positives = 404/733 (55%), Gaps = 47/733 (6%)
Query: 59 KVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS 118
K+I+++ + A V ++P + S++++I + F+ + +F +M L+
Sbjct: 55 KLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114
Query: 119 WNVMLTGYVR------NRRLGDARRLFDSMPQKDVVSW--NAMLSGYAQNGYADEAREVF 170
+ +L + ++G + D+ ++ +M Y + G +AR+VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 171 YQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 230
+M K+ ++ + LL AY G +EE R+ S+ + I N
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRIL-SEMESSGIEAN----------------- 216
Query: 231 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGM 286
+VSWN ++SG+ + G +A +F + H D T ++++ + M
Sbjct: 217 ---------IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 287 LDEARTF----FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITG 342
L+ R Q K++ +AM+ Y +S + LF N ITG
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 343 YGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
+NG + +A ++F++ ++ + VSW +II+G AQ G EAL +F E++ G N
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
T L C +IAAL G+ HG V+ VG+AL+ MY KCG I + VF
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 518
+ K++V WN+++ G++ HG K+ + +FES+ +KPD I+ +LSAC GL D
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 519 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 578
G +YF M+++Y + P +HY+CM++LLGRAG+L+EA DL++ MPFEP + WGALL +
Sbjct: 508 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
Query: 579 RIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 638
R+ N +L E AAE +F +EP N G YVLLSN+YAA G W + ++R++M +G++K G
Sbjct: 568 RLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPG 627
Query: 639 YSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEH 698
SW++V+N+++ GD HP+ D+I ++E+ +MR+ G+ + LHDVEE+E+E
Sbjct: 628 CSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQ 687
Query: 699 MLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFH 758
ML HSEKLAV FG+L P G P++VIKNLR+C DCH IK IS GR I +RD++RFH
Sbjct: 688 MLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFH 747
Query: 759 HFNEGICSCGDYW 771
HF +GICSCGD+W
Sbjct: 748 HFKDGICSCGDFW 760
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 162/365 (44%), Gaps = 28/365 (7%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D + +MR G A +VF+ M + V+ +A++ Y R + +
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 111 MP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGY 162
M + ++VSWN +L+G+ R+ +A +F + D V+ +++L +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 163 ADEAR----EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
+ R V Q K+ + ++ Y +G + LF+ E N + G
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 219 FVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV--- 271
+ ++ A ++F+ + +VVSW ++I+G AQ+G +A LF + V
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 272 -FTWTAMVSGYVQNGMLDEART---FFDQMPQKNEISY-NAMVAGYVQSNKMDMARELFE 326
T +M+ L R+ F ++ + + +A++ Y + ++++++ +F
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQARKLFD-MMPQR---DCVSWAAIISGYAQTGHYEE 382
MP++N+ WN+++ G+ +G + +F+ +M R D +S+ +++S Q G +E
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 383 ALNMF 387
F
Sbjct: 508 GWKYF 512
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 121/279 (43%), Gaps = 33/279 (11%)
Query: 46 KPDVKDPDLLKWNKVISTHMRNGHCDSALRVFN------------TMPRRSSVSYNAMIS 93
K + +++ W +I+ +NG AL +F T+P N
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAAL 404
Query: 94 GYLRNAR-FSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 152
G+ R+ F++ L D ++ + ++ Y + R+ ++ +F+ MP K++V WN+
Sbjct: 405 GHGRSTHGFAVRVHLLD-----NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 153 MLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW- 207
+++G++ +G A E +F + + IS+ LL+A G +E + F S+
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 208 ----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISG--YAQDGDMSQ-- 258
L ++C++ + L A L +M D W +++ + D+++
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIA 579
Query: 259 AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
A+ LF P ++ T+ + + Y GM E + ++M
Sbjct: 580 AEKLFHLEP-ENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/732 (34%), Positives = 413/732 (56%), Gaps = 31/732 (4%)
Query: 68 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNVML 123
G A RVF+ + ++ +N +++ ++ FS + LF KM + D +++ +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 124 TGYVRNRRLGDARRLF-----DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 178
+ R + +L +++ V N++++ Y +N D AR+VF +M ++
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 179 ISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL--- 231
ISWN ++ YV NG E+ +F S + +L + + G +++ R +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 232 -FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 290
R+ NT++ Y++ GD+ AK +F + + V ++T+M++GY + G+ EA
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 291 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITG 342
F++M ++ + + A++ + +D + + E + ++ N ++
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF---IEIKRDGESLNR 399
Y + G + +A +F M +D +SW II GY++ + EAL++F +E KR S +
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR--FSPDE 499
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
T +C L CA ++A + G++IHG +++ GY + V N+L+ MY KCG++ A+ +F+
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
I KD+VSW MIAGY HGFGK+A+ +F M+ G++ DEI+ V +L ACSH+GL+D G
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 520 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 579
+F M + + P+ +HY C++D+L R G L +A + NMP P A WGALL R
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 580 IHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 639
IH + +L EK AE VF++EP N+G YVL++N+YA + +W +R R+ G++K G
Sbjct: 680 IHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Query: 640 SWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHM 699
SW+E++ +++ F GD +PE + I AFL ++ +M EGY TK L D EE EKE
Sbjct: 740 SWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEA 799
Query: 700 LKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHH 759
L HSEKLA+A GI++ G+ IRV KNLRVC DCH K +SK+ R I+LRDS+RFH
Sbjct: 800 LCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQ 859
Query: 760 FNEGICSCGDYW 771
F +G CSC +W
Sbjct: 860 FKDGHCSCRGFW 871
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 162/371 (43%), Gaps = 80/371 (21%)
Query: 250 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------------ 297
Y GD+ +A +FD+ + W +++ ++G + F +M
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 298 ----------------------------PQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
++N + N++VA Y+++ ++D AR++F+ M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMT 257
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
R+V SWN++I GY N G E+ L++F++
Sbjct: 258 ERDVISWNSIINGYVSN-------------------------------GLAEKGLSVFVQ 286
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
+ G ++ +T + CAD + LG+ +H VK + N LL MY KCG
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
+ A VF + ++ VVS+ +MIAGYAR G +A+ +FE M+ G+ PD T+ VL+
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 510 CSHAGLIDRGT---EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
C+ L+D G E+ + + + S+ ++D+ + G ++EA+ + M +
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNA----LMDMYAKCGSMQEAELVFSEMRVK- 461
Query: 567 PAASWGALLGA 577
SW ++G
Sbjct: 462 DIISWNTIIGG 472
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 182/381 (47%), Gaps = 31/381 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQ 113
N +++ +++N DSA +VF+ M R +S+N++I+GY+ N +F +M +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 114 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS-----WNAMLSGYAQNGYADEARE 168
DL + + G + RL R S+ K S N +L Y++ G D A+
Sbjct: 294 IDLATIVSVFAG-CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKM 224
VF +M ++ +S+ ++A Y G EA +LF+ + ++ + ++ + ++
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 225 LGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
L +++ + + D+ N ++ YA+ G M +A+ +F + +D+ +W ++ G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 281 YVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV-----QSNKMDMARELFEAM------P 329
Y +N +EA + F+ + ++ S + V + D RE+ +
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
R+V+ N+++ Y + G + A LFD + +D VSW +I+GY G +EA+ +F +
Sbjct: 533 DRHVA--NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQ 590
Query: 390 IKRDGESLNRSTFSCALSTCA 410
+++ G + +F L C+
Sbjct: 591 MRQAGIEADEISFVSLLYACS 611
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 37/348 (10%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR--- 114
N ++ + + G DSA VF M RS VSY +MI+GY R A LF++M +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 115 -DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREV 169
D+ + +L R R L + +R+ + + + D+ NA++ YA+ G EA V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWN-----CLMGGFVKRKM 224
F +M K+ ISWN ++ Y N EA LF+ + + S + C++
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 225 LGAARKL---------FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
R++ F HV N+++ YA+ G + A LFD +D+ +WT
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVA-----NSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR 331
M++GY +G EA F+QM Q +EIS+ +++ S +D F M
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 332 -----NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISG 373
V + ++ + GD+ +A + + MP D W A++ G
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 173/369 (46%), Gaps = 29/369 (7%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSL 103
++ + D++ WN +I+ ++ NG + L VF M + ++ +G + SL
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL 314
Query: 104 ARDL----FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
R + R+ N +L Y + L A+ +F M + VVS+ +M++GYA+
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD--SKSD--WELIS 211
G A EA ++F +M + + + +L ++E R+ + ++D +++
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
N LM + K + A +F +M V+D++SWNT+I GY+++ ++A +LF+ +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 272 F-----TWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNAMVAGYVQSNKMDMAR 322
F T ++ D+ R + + S N++V Y + + +A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 323 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTG 378
LF+ + S+++ SW MI GYG +G +A LF+ M Q D +S+ +++ + +G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 379 HYEEALNMF 387
+E F
Sbjct: 615 LVDEGWRFF 623
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 47 PDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARD 106
+++ D++ WN +I + +N + + AL +FN + S + + A SL+
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS-- 513
Query: 107 LFDKMPQRDLVSWNVMLTGYVRNRRLGD--------------ARRLFDSMPQKDVVSWNA 152
FDK + + +M GY +R + + A LFD + KD+VSW
Sbjct: 514 AFDKGRE---IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 153 MLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLF-----DS 203
M++GY +G+ EA +F QM + IS+ LL A H+G ++E R F +
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 204 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDMSQAKNL 262
K + + + C++ + L A + + M + D W ++ G D+ A+ +
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 263 FDQSPHQDVFTWTAMVSGY 281
++ VF +GY
Sbjct: 691 AEK-----VFELEPENTGY 704
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 29/288 (10%)
Query: 374 YAQTGHYEEALNMF-IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 432
+ ++G+ E A+ + + K D ++ T L CAD +L+ GK++ + G+
Sbjct: 71 FCESGNLENAVKLLCVSGKWD---IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVI 127
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 492
+G+ L MY CG + EA+ VF+ ++ + + WN ++ A+ G ++ +F+ M
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
+ GV+ D T V + S + G E + + ++ + R+
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSV-HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 553 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 612
+ A+ + M E SW +++ +G L EK + +M SG+ + L+ +
Sbjct: 247 DSARKVFDEMT-ERDVISWNSIINGYVSNG---LAEKGLSVFVQMLV--SGIEIDLATIV 300
Query: 613 AASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPE 660
+ AD SR+ +G +H V CF E
Sbjct: 301 SVFAGCAD-----SRLISLG-------------RAVHSIGVKACFSRE 330
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 264/768 (34%), Positives = 421/768 (54%), Gaps = 58/768 (7%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPR---RSSVSYNAMISGYLRNARFSLARDL 107
+PD + +N +IS + ++G A VF TM R R VS++AM++ Y N R A +
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 108 FDKMPQRDLVSWNVMLTGYVR----NRRLGDARRLFDSMP-----QKDVVSWNAMLSGYA 158
F + + LV + T +R + +G R + + DV +++ +
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 159 --QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLM 216
+N + + A +VF +M N ++W ++ + G EA R F + ++
Sbjct: 214 KGENSF-ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF----------LDMVL 262
Query: 217 GGFVKRK-----MLGAARKLFDKMHVRDVVSWN-----------TMISGYAQ---DGDMS 257
GF K + A +L + + + SW +++ YA+ DG +
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVD 322
Query: 258 QAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQKNEISYN--AMVAGYVQ 314
+ +FD+ V +WTA+++GY++N + EA F +M + + N + +
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 315 SNKMDMAR-------ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 367
+ R + F+ + N S N++I+ + ++ + A++ F+ + +++ VS+
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSY 442
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
+ G + ++E+A + EI ++ TF+ LS A++ ++ G+QIH QVVK
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 487
G V NAL+ MY KCGSI A+ VF +E ++V+SW +MI G+A+HGF + L
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLET 562
Query: 488 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
F M GVKP+E+T V +LSACSH GL+ G +F SM +D+ + P +HY CM+DLL
Sbjct: 563 FNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLC 622
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 607
RAG L +A + + MPF+ W LGA R+H NTELG+ AA + +++P+ Y+
Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 608 LSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAF 667
LSN+YA +G+W ++ MR +M++ + K G SW+EV +KIHKF VGD HP +IY
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDE 742
Query: 668 LEELDLKMRREGYVSSTKLVLHDV----EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 723
L+ L +++R GYV T LVLH + +E EKE +L HSEK+AVAFG+++ RP+R
Sbjct: 743 LDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVR 802
Query: 724 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
V KNLRVC DCHNA+K+IS + GR I+LRD +RFHHF +G CSC DYW
Sbjct: 803 VFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 370 IISGYAQTGHYEEALNMFIEIKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+I + G A++ + RDG ++ TFS L +C LGK +H ++++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE---EKDVVSWNTMIAGYARHGFGKQAL 485
E + N+L+ +Y K G +A DVFE + ++DVVSW+ M+A Y +G A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
VF +G+ P++ V+ ACS++ + G
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/611 (38%), Positives = 359/611 (58%), Gaps = 26/611 (4%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
NK ++ +R+G+ A +F + R++V++N MISGY++ + AR LFD MP+RD+V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 118 SWNVMLTGYVRN---RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
+WN M++GYV R L +AR+LFD MP +D SWN M+SGYA+N EA +F +MP
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 175 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 234
+NA+SW+ ++ + NG ++ A LF + L+ G +K + L A + +
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 235 ----MHVRD--VVSWNTMISGYAQDGDMSQAKNLFDQSPH---------------QDVFT 273
+ R+ V ++NT+I GY Q G + A+ LFDQ P ++V +
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 274 WTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
W +M+ Y++ G + AR FDQM ++ IS+N M+ GYV ++M+ A LF MP+R+
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
SWN M++GY G++ AR F+ P++ VSW +II+ Y + Y+EA+++FI + +
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
GE + T + LS + L LG Q+H VVKT V NAL+ MY +CG I E+
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMES 462
Query: 454 NDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 512
+F+ ++ +++V++WN MI GYA HG +AL +F SMK+ G+ P IT V VL+AC+H
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 513 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 572
AGL+D F SM Y + P +HY+ ++++ G+ EEA ++ +MPFEP WG
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 573 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 632
ALL A RI+ N L AAE + ++EP +S YVLL N+YA G W +A +R M
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKR 642
Query: 633 VQKVTGYSWVE 643
++K G SWV+
Sbjct: 643 IKKERGSSWVD 653
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 201/396 (50%), Gaps = 29/396 (7%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D WN +IS + +N AL +F MP R++VS++AMI+G+ +N A LF KMP
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFD------SMPQKDVVSWNAMLSGYAQNGYADEA 166
+D ++ G ++N RL +A + S + V ++N ++ GY Q G + A
Sbjct: 195 VKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAA 254
Query: 167 REVFYQMPH---------------KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 211
R +F Q+P KN +SWN ++ AY+ G + A LFD D + IS
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS 314
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
WN ++ G+V + A LF +M RD SWN M+SGYA G++ A++ F+++P +
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNE-------ISYNAMVAGYVQSNKMDMAREL 324
+W ++++ Y +N EA F +M + E S + G V ++
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 325 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHYEEA 383
+V N +IT Y + G+I ++R++FD M +R+ ++W A+I GYA G+ EA
Sbjct: 435 VVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
LN+F +K +G + TF L+ CA ++ K
Sbjct: 495 LNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 58/369 (15%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
+KD D + WN +I ++ + A +F+ MP R + S+N M+SGY LAR F
Sbjct: 307 MKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 109 DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQNGYAD 164
+K P++ VSWN ++ Y +N+ +A LF M + D + ++LS A G +
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVN 424
Query: 165 -----EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS-KSDWELISWNCLMGG 218
+ ++ + + N L+ Y G I E+ R+FD K E+I+WN ++G
Sbjct: 425 LRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG- 483
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF----TW 274
GYA G+ S+A NLF ++ T+
Sbjct: 484 ------------------------------GYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP 329
++++ G++DEA+ F M +I Y+++V + + A + +MP
Sbjct: 514 VSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
Query: 330 -SRNVSSWNTMITG---YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA-- 383
+ + W ++ Y G A + + + + + YA G ++EA
Sbjct: 574 FEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQ 633
Query: 384 LNMFIEIKR 392
+ M +E KR
Sbjct: 634 VRMNMESKR 642
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 43/199 (21%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + D WN ++S + G+ + A F P + +VS+N++I+ Y +N + A DL
Sbjct: 337 EMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Query: 108 FDKM--------PQR------------------------------DLVSWNVMLTGYVRN 129
F +M P D+ N ++T Y R
Sbjct: 397 FIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRC 456
Query: 130 RRLGDARRLFDSMP-QKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGL 184
+ ++RR+FD M +++V++WNAM+ GYA +G A EA +F M + + I++ +
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSV 516
Query: 185 LAAYVHNGRIEEACRLFDS 203
L A H G ++EA F S
Sbjct: 517 LNACAHAGLVDEAKAQFVS 535
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/620 (39%), Positives = 361/620 (58%), Gaps = 25/620 (4%)
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGFVKRKMLGAARKLF 232
+ SWN ++A +G EA F S L S+ C + + + ++
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 233 DKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG-ML 287
+ V D+ + +I Y+ G + A+ +FD+ P +++ +WT+M+ GY NG L
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 288 DEARTFFDQMPQKNE----ISYNAM-VAGYVQSNKMDMARELFEAMPS--------RNVS 334
D F D + +N+ + ++M + + + A+ L E++ S R VS
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 335 SWNTMITGYGQNGD--IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE-IK 391
NT++ Y + G+ +A ARK+FD + +D VS+ +I+S YAQ+G EA +F +K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
+ N T S L + AL +GK IH QV++ G E VG +++ MY KCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
A F+ ++ K+V SW MIAGY HG +AL +F +M GV+P+ IT V VL+ACS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
HAGL G +F +M + V P +HY CM+DLLGRAG L++A DL++ M +P + W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 572 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
+LL A RIH N EL E + +F+++ N G Y+LLS++YA +GRW D +R M++
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 632 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 691
G+ K G+S +E+ ++H F +GD HP++++IY FL EL+ K+ GYVS+T V HDV
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 692 EEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIIL 751
+EEEKE L+ HSEKLA+AFGI+ G + V+KNLRVC DCHN IK ISKIV R ++
Sbjct: 580 DEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVV 639
Query: 752 RDSHRFHHFNEGICSCGDYW 771
RD+ RFHHF +G CSCGDYW
Sbjct: 640 RDAKRFHHFKDGGCSCGDYW 659
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 177/380 (46%), Gaps = 37/380 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTM------PRRSS--VSYNAMISGYLRNAR 100
V D+ WN VI+ R+G AL F++M P RSS + A S + +
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 101 FSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
+ F Q D+ + ++ Y +L DAR++FD +P++++VSW +M+ GY N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF- 219
G A +A +F + + + + + AC +K E I + GF
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 220 ----VKRKMLGA-----------ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 264
V +L A ARK+FD++ +D VS+N+++S YAQ G ++A +F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 265 QSPHQDVFTWTAMVSGYV-----QNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQS 315
+ V T+ A+ V +G L + DQ+ + + I +++ Y +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 316 NKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAII 371
+++ AR+ F+ M ++NV SW MI GYG +G A+A +LF M + + +++ +++
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 372 SGYAQTGHYEEALNMFIEIK 391
+ + G + E F +K
Sbjct: 396 AACSHAGLHVEGWRWFNAMK 415
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
+++ DV SWN++IA AR G +AL+ F SM+ + + P + + ACS I G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 520 TE-----YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
+ + + D V+ + +I + G+LE+A+ + +P + SW ++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSA------LIVMYSTCGKLEDARKVFDEIP-KRNIVSWTSM 148
Query: 575 LGASRIHGN 583
+ ++GN
Sbjct: 149 IRGYDLNGN 157
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/681 (35%), Positives = 380/681 (55%), Gaps = 33/681 (4%)
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM---- 173
S +++++ Y + L +A LF ++ V++W +++ + +A F +M
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 174 --PHKNAISWNGLLAAYVHNGRIEEACRLFDSK--SDWELISWNCLMGGFVKRKMLGAAR 229
P N + + R E+ F + D +L + N LM + K +LG
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAK--LLGMGS 158
Query: 230 KL-----FDKMHVR------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 278
K+ FD+M R + V T I + D + +F+ P +DV ++ ++
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID----SVRRVFEVMPRKDVVSYNTII 214
Query: 279 SGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
+GY Q+GM ++A +M + + + ++++ + + + +E+ + + +
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID 274
Query: 335 S----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
S ++++ Y ++ I + ++F + RD +SW ++++GY Q G Y EAL +F ++
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
FS + CA +A L LGKQ+HG V++ G+ + F+ +AL+ MY KCG+I
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
A +F+ + D VSW +I G+A HG G +A+ +FE MK GVKP+++ V VL+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
SH GL+D YF SM K Y + +HY + DLLGRAG+LEEA + + M EP +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
W LL + +H N EL EK AE +F ++ N G YVL+ N+YA++GRW + +R RMR
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 631 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 690
G++K SW+E++NK H F GD HP D+I FL+ + +M +EGYV+ T VLHD
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHD 634
Query: 691 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLII 750
V+EE K +L HSE+LAVAFGI+ G IRV KN+R+C DCH AIK ISKI R II
Sbjct: 635 VDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREII 694
Query: 751 LRDSHRFHHFNEGICSCGDYW 771
+RD+ RFHHFN G CSCGDYW
Sbjct: 695 VRDNSRFHHFNRGNCSCGDYW 715
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 174/384 (45%), Gaps = 60/384 (15%)
Query: 71 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG----- 125
DS RVF MPR+ VSYN +I+GY ++ + A + +M DL + L+
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 126 ----------------------------------YVRNRRLGDARRLFDSMPQKDVVSWN 151
Y ++ R+ D+ R+F + +D +SWN
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 152 AMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRL----FDS 203
++++GY QNG +EA +F QM A++++ ++ A H + +L
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 204 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
+ + L+ + K + AARK+FD+M+V D VSW +I G+A G +A +LF
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 264 DQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYV-Q 314
++ Q V + A+++ G++DEA +F+ M + E+ + A VA + +
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 315 SNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII-- 371
+ K++ A M S W+T+++ + ++ A K+ + + D + A +
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 552
Query: 372 -SGYAQTGHYEEALNMFIEIKRDG 394
+ YA G ++E + + +++ G
Sbjct: 553 CNMYASNGRWKEMAKLRLRMRKKG 576
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 129/302 (42%), Gaps = 52/302 (17%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ + ++ + ++ + + RVF+ + R +S+N++++GY++N R++ A LF +
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 333
Query: 111 MPQRDLVSWNV-------------------MLTGYVRNRRLGD----------------- 134
M + V L GYV G
Sbjct: 334 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 135 ---ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAA 187
AR++FD M D VSW A++ G+A +G+ EA +F +M + N +++ +L A
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 188 YVHNGRIEEACRLFDSKS-----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 242
H G ++EA F+S + + EL + + + L A KM V S
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGS 513
Query: 243 -WNTMISGYAQDGDMSQAKNLFDQ---SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
W+T++S + ++ A+ + ++ +++ + M + Y NG E +M
Sbjct: 514 VWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMR 573
Query: 299 QK 300
+K
Sbjct: 574 KK 575
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/614 (38%), Positives = 357/614 (58%), Gaps = 25/614 (4%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N +I Y + R +FDKMPQR++ +WN ++TG + L +A LF SMP++D
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDS 203
+WN+M+SG+AQ+ +EA ++ M HK N S+ +L+A + + ++
Sbjct: 119 TWNSMVSGFAQHDRCEEAL-CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 177
Query: 204 KSDWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 259
+ +S + L+ + K + A+++FD+M R+VVSWN++I+ + Q+G +A
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 260 KNLF----DQSPHQDVFTWTAMVSG-----YVQNGMLDEARTFFDQMPQKNEISYNAMVA 310
++F + D T +++S ++ G R + + + I NA V
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 311 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 370
Y + +++ AR +F++MP RNV + +MI+GY AR +F M +R+ VSW A+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
I+GY Q G EEAL++F +KR+ +F+ L CAD+A L LG Q H V+K G+
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 431 ------ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
E FVGN+L+ MY KCG + E VF + E+D VSWN MI G+A++G+G +A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
L +F M G KPD ITM+GVLSAC HAG ++ G YF SM +D+ V P HYTCM+D
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 604
LLGRAG LEEA+ ++ MP +P + WG+LL A ++H N LG+ AE + ++EP NSG
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 597
Query: 605 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 664
YVLLSN+YA G+W D N+R MR GV K G SW+++Q H F V D HP K +I
Sbjct: 598 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQI 657
Query: 665 YAFLEELDLKMRRE 678
++ L+ L +MR E
Sbjct: 658 HSLLDILIAEMRPE 671
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/626 (22%), Positives = 255/626 (40%), Gaps = 134/626 (21%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
++ N++I + + G + +VF+ MP+R+ ++N++++G + A LF MP
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--------------------------- 145
+RD +WN M++G+ ++ R +A F M ++
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 146 ------------DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 193
DV +A++ Y++ G ++A+ VF +M +N +SWN L+ + NG
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 194 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR---------DVVSWN 244
EA +F + + + + +A K+ ++H R D++ N
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 304
+ YA+ + +A+ +FD P ++V T+M+SGY AR F +M ++N +S
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSW---------------------------- 336
+NA++AGY Q+ + + A LF + +V
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 337 -----------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
N++I Y + G + + +F M +RDCVSW A+I G+AQ G+
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGY 473
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
EAL +F E+ GE + T LS C +E G+ + + G A
Sbjct: 474 GNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-------FGVA 526
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
L ++ C M+ R GF ++A + E M ++PD
Sbjct: 527 PLRDHYTC-----------------------MVDLLGRAGFLEEAKSMIEEMP---MQPD 560
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS-SKHYTCMIDLLGRAGRLEEAQDL 558
+ +L+AC I G Y K V PS S Y + ++ G+ E+ ++
Sbjct: 561 SVIWGSLLAACKVHRNITLGK---YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 559 MRNMPFE----PPAASWGALLGASRI 580
++M E P SW + G +
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQGHDHV 643
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 57/441 (12%)
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
++F ++ Y + G L++ R FD+MPQ+N ++N++V G + +D A LF +MP
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
R+ +WN+M++G+ AQ EEAL F
Sbjct: 114 ERDQCTWNSMVSGF-------------------------------AQHDRCEEALCYFAM 142
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
+ ++G LN +F+ LS C+ + + G Q+H + K+ + + ++G+AL+ MY KCG+
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
+ +A VF+ + +++VVSWN++I + ++G +AL VF+ M V+PDE+T+ V+SA
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 510 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
C+ I G E + K+ + +D+ + R++EA+ + +MP A
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 570 SWGALLGASRIHGNTELGEKAAEMVF-KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
+ G + KAA ++F KM N + L Y +G +A ++ +
Sbjct: 323 ETSMISGYAMAAST-----KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 629 RDVGVQKVTGYSWVEV--------------QNKIHKFTVGDCFHP-EKDRIYAFLEELDL 673
+ V T YS+ + Q +H G F E+D I+ +D+
Sbjct: 378 KRESVCP-THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 674 KMR----REGYVSSTKLVLHD 690
++ EGY+ K++ D
Sbjct: 437 YVKCGCVEEGYLVFRKMMERD 457
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 186/415 (44%), Gaps = 69/415 (16%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSL 103
++ D +++ WN +I+ +NG AL VF M V+ ++IS + +
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Query: 104 ARDLFDKMPQRDLVSWNVMLTG-----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+++ ++ + D + +++L+ Y + R+ +AR +FDSMP ++V++ +M+SGYA
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL------------------ 200
AR +F +M +N +SWN L+A Y NG EEA L
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 201 ---------------------------FDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
F S + ++ N L+ +VK + +F
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDE 289
KM RD VSWN MI G+AQ+G ++A LF + D T ++S G ++E
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 290 ARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGY 343
R +F M + ++ Y MV ++ ++ A+ + E MP + S W +++
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 344 GQNGDIAQ----ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
+ +I A KL ++ P + + + + YA+ G +E+ +N+ ++++G
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPS-NSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 625
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 150/343 (43%), Gaps = 38/343 (11%)
Query: 46 KPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLAR 105
K D D++ N + + + A +F++MP R+ ++ +MISGY A AR
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 106 DLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADE 165
+F KM +R++VSWN ++ GY +N +A LF + ++ V + + + AD
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK-ACADL 399
Query: 166 AREVFYQMPHKNAISW---------------NGLLAAYVHNGRIEEACRLFDSKSDWELI 210
A H + + N L+ YV G +EE +F + + +
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQ- 265
SWN ++ GF + A +LF +M D ++ ++S G + + ++ F
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 266 ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKM 318
+P +D +T MV + G L+EA++ ++MP Q + + + +++A +
Sbjct: 520 TRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 319 DM----ARELFEAMPSRNVSSWNTMITGYGQNG---DIAQARK 354
+ A +L E PS N + + Y + G D+ RK
Sbjct: 578 TLGKYVAEKLLEVEPS-NSGPYVLLSNMYAELGKWEDVMNVRK 619
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 383 ALNMFIEIKRDGESLNRST-FSCALSTC--ADIAALELGKQIHGQVVKTGYETGCFVGNA 439
A F+++ D S S+ F+ L +C + ++A+ + + +H V+K+G+ F+ N
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 440 LLGMYFKCGS-------------------------------IGEANDVFEGIEEKDVVSW 468
L+ Y KCGS + EA+ +F + E+D +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
N+M++G+A+H ++AL F M G +E + VLSACS +++G + +S+
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIA 179
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+ ++D+ + G + +AQ + M + SW +L+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLI 225
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/738 (34%), Positives = 394/738 (53%), Gaps = 48/738 (6%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
V + LLKW+K+ S ++ + N + + V N S YLR A +
Sbjct: 6 VIEQRLLKWDKLASLVPKSKKTPFPIDRLNELLK---VCAN---SSYLRIGESIHAHLIV 59
Query: 109 DKMPQR--DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA 166
R D N ++ YV+ R AR+LFD MP+++VVSW AM+ GY +G+ E
Sbjct: 60 TNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEV 119
Query: 167 REVFYQMPHKNAISWNGLLAAYV-----HNGRIEEACRLFDSKSDWELISWNCLMGGFVK 221
++F M N +A V ++GRIEE + + LIS FV+
Sbjct: 120 LKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE-----FVR 174
Query: 222 RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 281
NT++ Y+ +A + D P+ D+ +++ +SGY
Sbjct: 175 ----------------------NTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 282 VQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP----SRNV 333
++ G E + + N ++Y + + + +++A ++ M + V
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
+ +I YG+ G + A+++FD ++ I+ Y Q +EEALN+F ++
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
N TF+ L++ A+++ L+ G +HG V+K+GY VGNAL+ MY K GSI +A
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
F G+ +D+V+WNTMI+G + HG G++AL F+ M G P+ IT +GVL ACSH
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 514 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 573
G +++G YF + K + V P +HYTC++ LL +AG ++A+D MR P E +W
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 574 LLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
LL A + N LG+K AE + P++SG+YVLLSN++A S W +RS M + GV
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 634 QKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEE 693
+K G SW+ ++N+ H F D HPE IYA ++E+ K++ GY HDV+E
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDE 632
Query: 694 EEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRD 753
E++E L YHSEKLAVA+G++ P P+ V KN+R+C+DCH+AIK ISKI R I++RD
Sbjct: 633 EQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692
Query: 754 SHRFHHFNEGICSCGDYW 771
S+RFHHF +G CSC DYW
Sbjct: 693 SNRFHHFLDGQCSCCDYW 710
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 372/645 (57%), Gaps = 43/645 (6%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
+ + N IS H RNG+ A +F M RS VS+ AMIS Y N + S A +FD+MP
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 114 RDLVSWNVMLTGYVRNR-RLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
R S+N M+T ++N+ LG A LF +P+K+ VS+ M++G+ + G DEA ++ +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 173 MPHK--NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 230
P K ++++ N LL+ Y+ G+ EA R+F + E++S + ++ G+ K + AR
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 231 LFDKMHVRDVVSWNTMISGY----------------AQDGDM------------------ 256
LFD+M R+V++W MI GY Q+GD+
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 257 -----SQAKNLFDQSPHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVA 310
SQ L + P + D+F +++S Y + G + EA+ F M K+ +S+N+++
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 311 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 370
G VQ ++ A ELFE MP +++ SW MI G+ G+I++ +LF MMP++D ++W A+
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
IS + G+YEEAL F ++ + N TFS LS A +A L G QIHG+VVK
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
V N+L+ MY KCG+ +A +F I E ++VS+NTMI+GY+ +GFGK+AL +F
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 491 MKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 550
+++ G +P+ +T + +LSAC H G +D G +YF SM Y++ P HY CM+DLLGR+G
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSG 589
Query: 551 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 610
L++A +L+ MP +P + WG+LL AS+ H +L E AA+ + ++EP ++ YV+LS
Sbjct: 590 LLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQ 649
Query: 611 LYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 655
LY+ G+ D + + + ++K G SW+ ++ ++H F GD
Sbjct: 650 LYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD 694
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 192/395 (48%), Gaps = 52/395 (13%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
VK D + N ++S ++R G + A+RVF M + VS ++M+ GY + R AR LF
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 109 DKMPQRDLVSWNVMLTGY-------------VRNRRLGDARR------------------ 137
D+M +R++++W M+ GY +R R+ GD +
Sbjct: 232 DRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 138 --------LFDSMP-QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY 188
L MP + D+ N+++S Y++ GY EA+ VF M +K+++SWN L+
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGL 351
Query: 189 VHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMIS 248
V +I EA LF+ +++SW ++ GF + + +LF M +D ++W MIS
Sbjct: 352 VQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMIS 411
Query: 249 GYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 304
+ +G +A F + ++V +T+++++S L E ++ + N ++
Sbjct: 412 AFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Query: 305 ----YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM- 359
N++V+ Y + + A ++F + N+ S+NTMI+GY NG +A KLF M+
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 360 ---PQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+ + V++ A++S G+ + F +K
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 164/330 (49%), Gaps = 22/330 (6%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
DL N ++S + + G+ A VF M + SVS+N++I+G ++ + S A +LF+KMP
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP 368
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
+D+VSW M+ G+ + LF MP+KD ++W AM+S + NGY +EA F++
Sbjct: 369 GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK 428
Query: 173 MPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLMGGFVKRKM 224
M K N+ +++ +L+A + E ++ +++ N L+ + K
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSG 280
A K+F + ++VS+NTMISGY+ +G +A LF + T+ A++S
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Query: 281 YVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS 335
V G +D +F M I Y MV +S +D A L MP + S
Sbjct: 549 CVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSG 608
Query: 336 -WNTMITGYGQN--GDIAQ--ARKLFDMMP 360
W ++++ + D+A+ A+KL ++ P
Sbjct: 609 VWGSLLSASKTHLRVDLAELAAKKLIELEP 638
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 39/239 (16%)
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 487
T T F N+ + + + G++ EA +F + + +VSW MI+ YA +G +A V
Sbjct: 44 TTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQV 103
Query: 488 FESMKT-IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
F+ M + + + + + C + + E F + + +V+ Y MI
Sbjct: 104 FDEMPVRVTTSYNAMITAMIKNKCD----LGKAYELFCDIPEKNAVS-----YATMITGF 154
Query: 547 GRAGRLEEAQDLMRNMP--FEPPAASWGALLG-------------------------ASR 579
RAGR +EA+ L P F AS L G +S
Sbjct: 155 VRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 580 IHGNTELGE--KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
+HG ++G A + +M N + + + Y +G + D + RMR G KV
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/741 (33%), Positives = 406/741 (54%), Gaps = 26/741 (3%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTM------PRRSSVSYNAMISGYLRNARFSLA-RDLFD 109
+N +I + +G C+ A+ +F M P + + + R + L
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 110 KMP-QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
KM +DL N ++ Y L AR++FD M +++VVSW +M+ GYA+ +A +A +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 169 VFYQMPHKNAISWNGLL-------AAYVHNGRIEEACRLFDSKSDWEL--ISWNCLMGGF 219
+F++M ++ N + A + + E F S E+ + + L+ +
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 220 VKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWT 275
+K + A++LFD+ ++ N M S Y + G +A +F D D +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSR 331
+ +S Q + ++ + + S+ NA++ Y++ ++ D A +F+ M ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
V +WN+++ GY +NG++ A + F+ MP+++ VSW IISG Q +EEA+ +F ++
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 392 -RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
++G + + T S C + AL+L K I+ + K G + +G L+ M+ +CG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
A +F + +DV +W I A G ++A+ +F+ M G+KPD + VG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
SH GL+ +G E FYSM K + V+P HY CM+DLLGRAG LEEA L+ +MP EP
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
W +LL A R+ GN E+ AAE + + P +G YVLLSN+YA++GRW D +R M++
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 631 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 690
G++K G S ++++ K H+FT GD HPE I A L+E+ + G+V VL D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761
Query: 691 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLII 750
V+E+EK ML HSEKLA+A+G+++ G IR++KNLRVC DCH+ K SK+ R II
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821
Query: 751 LRDSHRFHHFNEGICSCGDYW 771
LRD++RFH+ +G CSCGD+W
Sbjct: 822 LRDNNRFHYIRQGKCSCGDFW 842
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 208/447 (46%), Gaps = 51/447 (11%)
Query: 166 AREVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFV 220
A+EVF + +N L+ Y +G EA LF +S + ++ +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 221 KRKMLGAARK---LFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
K + G + L KM + +D+ N+++ YA+ G++ A+ +FD+ ++V +WT+
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 277 MVSGYVQNGMLDEARTFFDQMPQKNEISYNA-----MVAGYVQSNKMDMARELFEAMPSR 331
M+ GY + +A F +M + E++ N+ +++ + ++ +++ + +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 332 NVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 387
+ + M++ Y + I A++LFD + A+ S Y + G EAL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
+ G +R + A+S+C+ + + GK HG V++ G+E+ + NAL+ MY KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 448 -------------------------------GSIGEANDVFEGIEEKDVVSWNTMIAGYA 476
G + A + FE + EK++VSWNT+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 477 RHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
+ ++A+ VF SM++ GV D +TM+ + SAC H G +D +Y + K+ +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLD 504
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ T ++D+ R G E A + ++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 335/533 (62%), Gaps = 9/533 (1%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
D+V NT+++ YA+ G + +A+ +F++ P +D TWT ++SGY Q+ +A FF+QM
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 299 Q----KNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIA 350
+ NE + ++++ + +L + NV + ++ Y + G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
A+ +FD + R+ VSW A+I+G+A+ E+AL +F + RDG + +++ C+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
LE GK +H ++K+G + F GN LL MY K GSI +A +F+ + ++DVVSWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
++ YA+HGFGK+A+ FE M+ +G++P+EI+ + VL+ACSH+GL+D G Y+ M KD
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD- 392
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
+ P + HY ++DLLGRAG L A + MP EP AA W ALL A R+H NTELG A
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 591 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 650
AE VF+++P + G +V+L N+YA+ GRW DA +R +M++ GV+K SWVE++N IH
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 651 FTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 710
F D HP+++ I EE+ K++ GYV T V+ V+++E+E L+YHSEK+A+A
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 711 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 763
F +L P G I + KN+RVC DCH AIK SK+VGR II+RD++RFHHF +
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 166/340 (48%), Gaps = 27/340 (7%)
Query: 75 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD 134
R +NT+ ++ +V + +I G + +A + + + D+V N +L Y + L +
Sbjct: 61 RFYNTLLKKCTV-FKLLIQGRIVHAH------ILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAY 188
AR++F+ MPQ+D V+W ++SGY+Q+ +A F QM P++ +S AA
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 189 VHNGRIEEACRLFDSKS--DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 246
G F K D + + L+ + + ++ A+ +FD + R+ VSWN +
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 247 ISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 302
I+G+A+ +A LF F++ ++ G L++ + M + E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 303 ----ISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDM 358
+ N ++ Y +S + AR++F+ + R+V SWN+++T Y Q+G +A F+
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 359 MP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
M + + +S+ ++++ + +G +E + + +K+DG
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 183/402 (45%), Gaps = 61/402 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM- 111
D++ N +++ + + G + A +VF MP+R V++ +ISGY ++ R A F++M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 112 -----PQRDLVS---------------------------------WNVMLTGYVRNRRLG 133
P +S + +L Y R +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYV 189
DA+ +FD++ ++ VSWNA+++G+A+ ++A E+F M + S+ L A
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 190 HNGRIEEA--CRLFDSKSDWELISW--NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
G +E+ + KS +L+++ N L+ + K + ARK+FD++ RDVVSWN+
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
+++ YAQ G +A F++ + ++ ++++ +G+LDE +++ M +
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Query: 302 EIS----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITG--YGQNGDIA--QA 352
+ Y +V ++ ++ A E MP ++ W ++ +N ++ A
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
+F++ P D + + YA G + +A + ++K G
Sbjct: 454 EHVFELDPD-DPGPHVILYNIYASGGRWNDAARVRKKMKESG 494
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 46/275 (16%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+R ++ L C L G+ +H ++++ + +GN LL MY KCGS+ EA VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA-------- 509
E + ++D V+W T+I+GY++H AL+ F M G P+E T+ V+ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 510 CSHA---------------------------GLIDRGTEYFYSMNKDYSVTPSSKHYTCM 542
C H GL+D F ++ V+ + +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-----WNAL 233
Query: 543 IDLLGRAGRLEEAQDLMRNM---PFEPPAASWGALLGASRIHGNTELGEKA-AEMVFKME 598
I R E+A +L + M F P S+ +L GA G E G+ A M+ E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 599 PHNSGMYVLLSNLYAASGRWADAGNMRSRM--RDV 631
+ L ++YA SG DA + R+ RDV
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 354/573 (61%), Gaps = 16/573 (2%)
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----- 267
N L+ + K A ++FD+M RD ++W ++++ Q ++S K L S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ-ANLS-GKTLSVFSSVGSSS 99
Query: 268 --HQDVFTWTAMVSGYVQNGMLDEART----FFDQMPQKNEISYNAMVAGYVQSNKMDMA 321
D F ++A+V G +D R F +E+ +++V Y + ++ A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
+ +F+++ +N SW M++GY ++G +A +LF ++P ++ SW A+ISG+ Q+G
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 382 EALNMFIEIKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
EA ++F E++R+ + L+ S + CA++AA G+Q+HG V+ G+++ F+ NAL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 441 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 500
+ MY KC + A D+F + +DVVSW ++I G A+HG ++AL +++ M + GVKP+E
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 501 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 560
+T VG++ ACSH G +++G E F SM KDY + PS +HYTC++DLLGR+G L+EA++L+
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 561 NMPFEPPAASWGALLGASRIHGNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWA 619
MPF P +W ALL A + G ++G + A+ +V + + Y+LLSN+YA++ W
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Query: 620 DAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR-RE 678
R ++ ++ V+K G+S VEV+ + F G+ HP K+ I+ L++L+ +MR R
Sbjct: 460 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 519
Query: 679 GYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAI 738
GYV T +LHD++E+EKE +L +HSE+ AVA+G+L G PIR++KNLRVC DCH +
Sbjct: 520 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVL 579
Query: 739 KHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
KHIS+I R II+RD+ R+HHF G CSC D+W
Sbjct: 580 KHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 190/420 (45%), Gaps = 57/420 (13%)
Query: 128 RNRRLGDARRLFDSMPQKDVVSW----NAMLSGYAQNGYADEAREVFYQMPHKNAISWNG 183
RNR L A+ L + + +V N +++ Y + G A A +VF +MPH++ I+W
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 184 LLAAY-----------------------------------------VHNGRIEEACRLFD 202
+L A + +GR + C
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR-QVHCHFIV 133
Query: 203 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 262
S+ + + + L+ + K +L +A+ +FD + V++ +SW M+SGYA+ G +A L
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA- 321
F P +++++WTA++SG+VQ+G EA + F +M ++ + +V + ++A
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 322 ----RELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 373
R++ + + S N +I Y + D+ A+ +F M RD VSW ++I G
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 374 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GYET 432
AQ G E+AL ++ ++ G N TF + C+ + +E G+++ + K G
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESM 491
LL + + G + EA ++ + D +W +++ R G G+ + + + +
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 145/287 (50%), Gaps = 27/287 (9%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
D V + ++ Y + L A+ +FDS+ K+ +SW AM+SGYA++G +EA E+F +P
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 175 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 234
KN SW L++ +V +G+ EA +F ++ E + ++ V ++GA L
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVF-TEMRRERVD---ILDPLVLSSIVGACANLAAS 254
Query: 235 MHVRDVVSW-------------NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 281
+ R V N +I YA+ D+ AK++F + H+DV +WT+++ G
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 282 VQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPS-----RN 332
Q+G ++A +D M + NE+++ ++ ++ RELF++M +
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 333 VSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTG 378
+ + ++ G++G + +A L MP D +WAA++S + G
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 153/333 (45%), Gaps = 27/333 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
+ ++ + + G +SA VF+++ ++++S+ AM+SGY ++ R A +LF +P ++L
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY 203
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 177
SW +++G+V++ + +A +F M ++ V + ++ A+ A + + H
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 178 AISW---------NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
I+ N L+ Y + A +F +++SW L+ G + A
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 229 RKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVS 279
L+D M V V++ +I + G + + + LF D + +T ++
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 280 GYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDM----ARELFEAMPSRNVS 334
++G+LDEA MP +E ++ A+++ + + M A L + ++ S
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPS 443
Query: 335 SWNTMITGYGQN---GDIAQA-RKLFDMMPQRD 363
++ + Y G +++A RKL +M ++D
Sbjct: 444 TYILLSNIYASASLWGKVSEARRKLGEMEVRKD 476
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 124/265 (46%), Gaps = 37/265 (13%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR-------F 101
++ + + W ++S + ++G + AL +F +P ++ S+ A+ISG++++ + F
Sbjct: 166 IRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVF 225
Query: 102 SLAR----DLFDKMPQRDLVSWNVMLTGYVRNRRL-GDARRL-FDSMPQKDVVSWNAMLS 155
+ R D+ D + +V L + R++ G L FDS V NA++
Sbjct: 226 TEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC----VFISNALID 281
Query: 156 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD---------SKSD 206
YA+ A+++F +M H++ +SW L+ +G+ E+A L+D ++
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 207 WELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVS-WNTMISGYAQDGDMSQAKN 261
+ + + C GFV++ R+LF M +R + + ++ + G + +A+N
Sbjct: 342 FVGLIYACSHVGFVEK-----GRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAEN 396
Query: 262 LFDQSPH-QDVFTWTAMVSGYVQNG 285
L P D TW A++S + G
Sbjct: 397 LIHTMPFPPDEPTWAALLSACKRQG 421
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
L CA L K +H +VK G C + N L+ +Y KCG+ A VF+ + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 466 VSWNTMIAGYARHGF-GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE--- 521
++W +++ + GK + + G++PD+ ++ AC++ G ID G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 522 -YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 580
+ S + V SS ++D+ + G L A+ + ++ + SW A++
Sbjct: 130 HFIVSEYANDEVVKSS-----LVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAK 183
Query: 581 HGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMR 629
G E+A E+ + N + L + + SG+ +A ++ + MR
Sbjct: 184 SGRK---EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/657 (34%), Positives = 378/657 (57%), Gaps = 54/657 (8%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAA--- 187
AR++FD +P+ + WNA++ GY++N + +A ++ M ++ ++ LL A
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 188 --YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
++ GR A ++F D ++ N L+ + K + LG+AR +F+ + +
Sbjct: 132 LSHLQMGRFVHA-QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL-------- 182
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE--- 302
P + + +WTA+VS Y QNG EA F QM + +
Sbjct: 183 ---------------------PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
Query: 303 -ISYNAMVAGYVQSNKMDMARELFEAMPSRNVS-------SWNTMITGYGQNGDIAQARK 354
++ +++ + + R + ++ + S NTM Y + G +A A+
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKI 278
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
LFD M + + W A+ISGYA+ G+ EA++MF E+ + + + A+S CA + +
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
LE + ++ V ++ Y F+ +AL+ M+ KCGS+ A VF+ ++DVV W+ MI G
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
Y HG ++A+ ++ +M+ GV P+++T +G+L AC+H+G++ G +F M D+ + P
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINP 457
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
+HY C+IDLLGRAG L++A ++++ MP +P WGALL A + H + ELGE AA+ +
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 595 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 654
F ++P N+G YV LSNLYAA+ W +R RM++ G+ K G SWVEV+ ++ F VG
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577
Query: 655 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 714
D HP + I +E ++ +++ G+V++ LHD+ +EE E L HSE++A+A+G++
Sbjct: 578 DKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLI 637
Query: 715 TIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+ P G P+R+ KNLR C +CH A K ISK+V R I++RD++RFHHF +G+CSCGDYW
Sbjct: 638 STPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 18/350 (5%)
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKN 301
+I + GD++ A+ +FD P +F W A++ GY +N +A + M +
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 302 EISYNAMVAGYVQSNKMDMAR----ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 357
++ ++ + + M R ++F +V N +I Y + + AR +F+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 358 --MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
+P+R VSW AI+S YAQ G EAL +F ++++ + L+ + L
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
+ G+ IH VVK G E + +L MY KCG + A +F+ ++ +++ WN MI+GY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDY--SV 532
A++G+ ++A+ +F M V+PD I++ +SAC+ G +++ + Y Y DY V
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 582
SS +ID+ + G +E A+ L+ + + W A++ +HG
Sbjct: 359 FISS----ALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 230/529 (43%), Gaps = 90/529 (17%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM--PRRSSVSYN-----AMISG--YLRN 98
D+ P + WN +I + RN H AL +++ M R S S+ SG +L+
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 99 ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFD--SMPQKDVVSWNAMLSG 156
RF A+ +F D+ N ++ Y + RRLG AR +F+ +P++ +VSW A++S
Sbjct: 138 GRFVHAQ-VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 157 YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW-----ELIS 211
YAQNG EA E+F QM R D K DW L +
Sbjct: 197 YAQNGEPMEALEIFSQM-------------------------RKMDVKPDWVALVSVLNA 231
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
+ CL R + + K+ ++ ++S NTM YA+ G ++ AK LFD+ ++
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNL 288
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEA 327
W AM+SGY +NG EA F +M K + IS + ++ Q ++ AR ++E
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY 348
Query: 328 MPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
+ +V + +I + + G + AR +FD RD V W+A+I GY G EA
Sbjct: 349 VGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
++++ ++R G N TF L C H +V+ G+
Sbjct: 409 ISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMVREGW------------W 445
Query: 444 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
+F N + + + +I R G QA +E +K + V+P
Sbjct: 446 FF--------NRMADHKINPQQQHYACVIDLLGRAGHLDQA---YEVIKCMPVQPGVTVW 494
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
+LSAC ++ G Y+ + +S+ PS+ + + L A RL
Sbjct: 495 GALLSACKKHRHVELGE---YAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
KQIH +++ G + F+ L+ G I A VF+ + + WN +I GY+R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 479 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFYSMNKDYSVTPS 535
+ AL+++ +M+ V PD T +L ACS + G + + D V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPF-EPPAASWGALLGA 577
+ +I L + RL A+ + +P E SW A++ A
Sbjct: 158 NG----LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/740 (33%), Positives = 405/740 (54%), Gaps = 26/740 (3%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTM------PRRSSVSYNAMISGYLRNARFSLA-RDLFD 109
+N +I + +G C+ A+ +F M P + + + R + L
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 110 KMP-QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
KM +DL N ++ Y L AR++FD M +++VVSW +M+ GYA+ +A +A +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 169 VFYQMPHKNAISWNGLL-------AAYVHNGRIEEACRLFDSKSDWEL--ISWNCLMGGF 219
+F++M ++ N + A + + E F S E+ + + L+ +
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 220 VKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWT 275
+K + A++LFD+ ++ N M S Y + G +A +F D D +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSR 331
+ +S Q + ++ + + S+ NA++ Y++ ++ D A +F+ M ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
V +WN+++ GY +NG++ A + F+ MP+++ VSW IISG Q +EEA+ +F ++
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 392 -RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
++G + + T S C + AL+L K I+ + K G + +G L+ M+ +CG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
A +F + +DV +W I A G ++A+ +F+ M G+KPD + VG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
SH GL+ +G E FYSM K + V+P HY CM+DLLGRAG LEEA L+ +MP EP
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
W +LL A R+ GN E+ AAE + + P +G YVLLSN+YA++GRW D +R M++
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 631 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 690
G++K G S ++++ K H+FT GD HPE I A L+E+ + G+V VL D
Sbjct: 702 KGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMD 761
Query: 691 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLII 750
V+E+EK ML HSEKLA+A+G+++ G IR++KNLRVC DCH+ K SK+ R II
Sbjct: 762 VDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREII 821
Query: 751 LRDSHRFHHFNEGICSCGDY 770
LRD++RFH+ +G CSCGD+
Sbjct: 822 LRDNNRFHYIRQGKCSCGDF 841
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 208/447 (46%), Gaps = 51/447 (11%)
Query: 166 AREVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFV 220
A+EVF + +N L+ Y +G EA LF +S + ++ +
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 221 KRKMLGAARK---LFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
K + G + L KM + +D+ N+++ YA+ G++ A+ +FD+ ++V +WT+
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 277 MVSGYVQNGMLDEARTFFDQMPQKNEISYNA-----MVAGYVQSNKMDMARELFEAMPSR 331
M+ GY + +A F +M + E++ N+ +++ + ++ +++ + +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 332 NVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 387
+ + M++ Y + I A++LFD + A+ S Y + G EAL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
+ G +R + A+S+C+ + + GK HG V++ G+E+ + NAL+ MY KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 448 -------------------------------GSIGEANDVFEGIEEKDVVSWNTMIAGYA 476
G + A + FE + EK++VSWNT+I+G
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 477 RHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
+ ++A+ VF SM++ GV D +TM+ + SAC H G +D +Y + K+ +
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLD 504
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ T ++D+ R G E A + ++
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 342/541 (63%), Gaps = 8/541 (1%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
DV N +I+ Y++ G + A+ +FD + + +W M+ Y +N M EA F +M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 299 QK----NEISYNAMVAGY-VQSNKMDMARELFEAMPS---RNVSSWNTMITGYGQNGDIA 350
+ +E + +++++ V + ++ + ++ + N+ ++ Y + G I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
A ++F+ M + V+W+++++GY Q +YEEAL ++ +R N+ T S + C+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
++AAL GKQ+H + K+G+ + FV ++ + MY KCGS+ E+ +F ++EK++ WNT
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
+I+G+A+H K+ +++FE M+ G+ P+E+T +LS C H GL++ G +F M Y
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
++P+ HY+CM+D+LGRAG L EA +L++++PF+P A+ WG+LL + R++ N EL E A
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 454
Query: 591 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 650
AE +F++EP N+G +VLLSN+YAA+ +W + R +RD V+KV G SW+++++K+H
Sbjct: 455 AEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHT 514
Query: 651 FTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 710
F+VG+ HP I + L+ L +K R+ GY S + LHDVE +KE +L HSEKLA+
Sbjct: 515 FSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALV 574
Query: 711 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDY 770
FG++ +P P+R++KNLR+C DCH +K S R II+RD +RFHHF++G CSCGD+
Sbjct: 575 FGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Query: 771 W 771
W
Sbjct: 635 W 635
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 162/357 (45%), Gaps = 30/357 (8%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV- 147
N +I+ Y + LAR +FD M +R LVSWN M+ Y RNR +A +F M +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 148 ---VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACR 199
+ +++LS N A E +++ + + K I N LL Y G I++A +
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 200 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGD 255
+F+S D ++W+ ++ G+V+ K A L+ + ++ + +++I +
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 256 MSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG 311
+ + K + +VF ++ V Y + G L E+ F ++ +KN +N +++G
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 312 YVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----- 362
+ + + LFE M N +++++++ G G + + R+ F +M
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
+ V ++ ++ + G EA + I D + S + L++C LEL +
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA---SIWGSLLASCRVYKNLELAE 452
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 147/312 (47%), Gaps = 23/312 (7%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
D+ NV++ Y + + AR++FD M ++ +VSWN M+ Y +N EA ++F +M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 175 HK----NAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLG 226
++ + + + +L+A N E C + D L L+ + K M+
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYV 282
A ++F+ M + V+W++M++GY Q+ + +A L+ + S Q+ FT ++++
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 283 QNGMLDEARTFFDQMPQKNEISYNAMVAG-----YVQSNKMDMARELFEAMPSRNVSSWN 337
L E + + K+ N VA Y + + + +F + +N+ WN
Sbjct: 275 NLAALIEGKQ-MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 338 TMITGYGQNGDIAQARKLFDMMPQ----RDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
T+I+G+ ++ + LF+ M Q + V++++++S TG EE F ++
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTT 393
Query: 394 -GESLNRSTFSC 404
G S N +SC
Sbjct: 394 YGLSPNVVHYSC 405
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
NR+ L CA A+ K HG++++ E + N L+ Y KCG + A VF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
+G+ E+ +VSWNTMI Y R+ +AL +F M+ G K E T+ VLSAC
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG-VNCDA 178
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 577
+ + ++ + + T ++DL + G +++A + +M + + +W +++
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAG 237
Query: 578 SRIHGNTE 585
+ N E
Sbjct: 238 YVQNKNYE 245
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 118/270 (43%), Gaps = 53/270 (19%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D +L ++ + + G A++VF +M +SSV++++M++GY++N + A L+ +
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 111 MPQRDLVSWNVMLTG---------------------------------------YVRNRR 131
+ L L+ Y +
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAA 187
L ++ +F + +K++ WN ++SG+A++ E +F +M H N ++++ LL+
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
Query: 188 YVHNGRIEEACRLFD-SKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 242
H G +EE R F ++ + L + ++C++ + +L A +L + S
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 243 -WNTMISG--YAQDGDMSQ--AKNLFDQSP 267
W ++++ ++ ++++ A+ LF+ P
Sbjct: 434 IWGSLLASCRVYKNLELAEVAAEKLFELEP 463
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/527 (41%), Positives = 326/527 (61%), Gaps = 11/527 (2%)
Query: 256 MSQAKNLFDQSPHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 314
MS A +F + +VF W ++ GY + G A + + +M + + ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 315 SNKMDMAR-ELFEAMPSRNVSS--------WNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
MA L E + S + S N+++ Y GD+A A K+FD MP++D V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
+W ++I+G+A+ G EEAL ++ E+ G + T LS CA I AL LGK++H +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 426 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
+K G N LL +Y +CG + EA +F+ + +K+ VSW ++I G A +GFGK+A+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 486 MVFESMK-TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+F+ M+ T G+ P EIT VG+L ACSH G++ G EYF M ++Y + P +H+ CM+D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 604
LL RAG++++A + +++MP +P W LLGA +HG+++L E A + ++EP++SG
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 605 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 664
YVLLSN+YA+ RW+D +R +M GV+KV G+S VEV N++H+F +GD HP+ D I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 665 YAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRV 724
YA L+E+ ++R EGYV V DVEEEEKE+ + YHSEK+A+AF +++ P PI V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 725 IKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+KNLRVC DCH AIK +SK+ R I++RD RFHHF G CSC DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 28/327 (8%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD 109
K ++ WN +I + G+ SA ++ M V + +L A ++A
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 110 KMPQRDLVSWNVMLTGYVRNRRL------GD---ARRLFDSMPQKDVVSWNAMLSGYAQN 160
+ ++ YV+N L GD A ++FD MP+KD+V+WN++++G+A+N
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 161 GYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISW 212
G +EA ++ +M K + + LL+A G + R + L S
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD-- 270
N L+ + + + A+ LFD+M ++ VSW ++I G A +G +A LF +
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 271 ---VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMAR 322
T+ ++ GM+ E +F +M ++ +I + MV ++ ++ A
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 323 ELFEAMPSR-NVSSWNTMITGYGQNGD 348
E ++MP + NV W T++ +GD
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGD 407
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLARD 106
+ DL+ WN VI+ NG + AL ++ M + + +++S + +L +
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 107 LFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ M + R+L S NV+L Y R R+ +A+ LFD M K+ VSW +++ G A NG+
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 303
Query: 163 ADEAREVFYQMPHKNA-----ISWNGLLAAYVHNGRIEEACRLF-----DSKSDWELISW 212
EA E+F M I++ G+L A H G ++E F + K + + +
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 363
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAK 260
C++ + + A + M ++ +VV W T++ GD A+
Sbjct: 364 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 329/532 (61%), Gaps = 10/532 (1%)
Query: 250 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISY 305
Y + + A+ + D+ P ++V +WTAM+S Y Q G EA T F +M + NE ++
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQ 361
++ ++++ + + +++ + N S ++++ Y + G I +AR++F+ +P+
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 362 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
RD VS AII+GYAQ G EEAL MF + +G S N T++ L+ + +A L+ GKQ
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 422 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 481
H V++ + N+L+ MY KCG++ A +F+ + E+ +SWN M+ GY++HG G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 482 KQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHY 539
++ L +F M+ VKPD +T++ VLS CSH + D G F M +Y P ++HY
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 540 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 599
C++D+LGRAGR++EA + ++ MP +P A G+LLGA R+H + ++GE + ++EP
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 600 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 659
N+G YV+LSNLYA++GRWAD N+R+ M V K G SW++ + +H F D HP
Sbjct: 457 ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 516
Query: 660 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 719
++ + A ++E+ +KM++ GYV VL+DV+EE+KE ML HSEKLA+ FG++ G
Sbjct: 517 RREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEG 576
Query: 720 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
PIRV KNLR+C DCHN K SK+ R + LRD +RFH +GICSCGDYW
Sbjct: 577 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 195/438 (44%), Gaps = 46/438 (10%)
Query: 75 RVFNTMPRRSSVSYNAMISGYLRNARFSLAR-DLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
R F++ P + IS N R A ++ P+ ++ +L + R L
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALR 69
Query: 134 DARRLFDSMPQKDVVSWN----AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYV 189
D +R+ M + + +L Y + ++AR+V +MP KN +SW +++ Y
Sbjct: 70 DGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 190 HNGRIEEACRLFDS--KSDWEL--ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN- 244
G EA +F +SD + ++ ++ ++ LG +++ +V WN
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL-----IVKWNY 184
Query: 245 --------TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
+++ YA+ G + +A+ +F+ P +DV + TA+++GY Q G+ +EA F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 297 MPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGD 348
+ + N ++Y +++ +D ++ + R + + N++I Y + G+
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCAL 406
++ AR+LFD MP+R +SW A++ GY++ G E L +F + RD + + + T L
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVL 363
Query: 407 STCADIAALELGKQIHGQVVKTGYET-------GCFVGNALLGMYFKCGSIGEANDVFEG 459
S C+ + G I +V Y T GC V M + G I EA + +
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV-----DMLGRAGRIDEAFEFIKR 418
Query: 460 IEEKDVVSWNTMIAGYAR 477
+ K + G R
Sbjct: 419 MPSKPTAGVLGSLLGACR 436
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 178/377 (47%), Gaps = 45/377 (11%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSL 103
++ + +++ W +IS + + GH AL VF M R + ++ +++ +R + L
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 104 ARDLFDKMPQRDLVSWNV---------MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAML 154
+ + +V WN +L Y + ++ +AR +F+ +P++DVVS A++
Sbjct: 172 GKQIHGL-----IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 155 SGYAQNGYADEAREVFYQMPHK----NAISWNGLLA-----AYVHNGRIEEACRLFDSKS 205
+GYAQ G +EA E+F+++ + N +++ LL A + +G+ + C + +
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK-QAHCHVLRREL 285
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-- 263
+ + N L+ + K L AR+LFD M R +SWN M+ GY++ G + LF
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRL 345
Query: 264 ---DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKNEISYNAMVAGYVQ 314
++ D T A++SG M D FD M + Y +V +
Sbjct: 346 MRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGR 405
Query: 315 SNKMDMARELFEAMPSRNVSSWNTMITGYGQ---NGDIAQA--RKLFDMMPQRDCVSWAA 369
+ ++D A E + MPS+ + + G + + DI ++ R+L ++ P+ + ++
Sbjct: 406 AGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE-NAGNYVI 464
Query: 370 IISGYAQTGHYEEALNM 386
+ + YA G + + N+
Sbjct: 465 LSNLYASAGRWADVNNV 481
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
F P + IS G +EAL +E+ G + + L+ C D AL
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
G+++H ++KT Y ++ LL Y KC + +A V + + EK+VVSW MI+ Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYSV 532
++ G +AL VF M KP+E T VL++C A + G + N D +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
S ++D+ +AG+++EA+++ +P E S A++ + L E+A E
Sbjct: 189 FVGSS----LLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQLGLDEEALE 240
Query: 593 MVFKMEPHNSGM---YVLLSNLYAA 614
M ++ H+ GM YV ++L A
Sbjct: 241 MFHRL--HSEGMSPNYVTYASLLTA 263
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 355/611 (58%), Gaps = 18/611 (2%)
Query: 179 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA----RKLFDK 234
IS N L+ + G++++A R+ +S ++ L+ R L A R + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 235 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
+D +I Y+ G + A+ +FD++ + ++ W A+ G +E +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 295 DQM----PQKNEISYN----AMVAGYVQSNKMDMARELFEAMPSRNVSS----WNTMITG 342
+M + + +Y A VA N + +E+ + R SS T++
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE--SLNRS 400
Y + G + A +F MP R+ VSW+A+I+ YA+ G EAL F E+ R+ + S N
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 460
T L CA +AALE GK IHG +++ G ++ V +AL+ MY +CG + VF+ +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 461 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
++DVVSWN++I+ Y HG+GK+A+ +FE M G P +T V VL ACSH GL++ G
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 580
F +M +D+ + P +HY CM+DLLGRA RL+EA ++++M EP WG+LLG+ RI
Sbjct: 407 RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466
Query: 581 HGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
HGN EL E+A+ +F +EP N+G YVLL+++YA + W + ++ + G+QK+ G
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 641 WVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHML 700
W+EV+ K++ F D F+P ++I+AFL +L M+ +GY+ TK VL+++E EEKE ++
Sbjct: 527 WMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIV 586
Query: 701 KYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHF 760
HSEKLA+AFG++ G PIR+ KNLR+CEDCH K ISK + + I++RD +RFH F
Sbjct: 587 LGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRF 646
Query: 761 NEGICSCGDYW 771
G+CSCGDYW
Sbjct: 647 KNGVCSCGDYW 657
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 172/421 (40%), Gaps = 61/421 (14%)
Query: 45 NKPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS-----VSYNAMISGYLRNA 99
+ P V P N + + ++ C AL P SS +S N +I +
Sbjct: 5 HPPQVIQPTYHTVNFLPRSPLKPPSCSVAL----NNPSISSGAGAKISNNQLIQSLCKEG 60
Query: 100 RFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA----RRLFDSMPQKDVVSWNAMLS 155
+ A + + ++ +++ L DA R + D+ +D ++
Sbjct: 61 KLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIG 120
Query: 156 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF------DSKSDW-- 207
Y+ G D AR+VF + + WN L A G EE L+ +SD
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 208 ------ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 261
++ C + +K K + A L + + V T++ YA+ G + A
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHA--HLTRRGYSSHVYIMTTLVDMYARFGCVDYASY 238
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEA-RTFFDQMPQKNEISYNA------------- 307
+F P ++V +W+AM++ Y +NG EA RTF + M + + S N+
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 308 -------MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP 360
++ GY+ +D + A ++T YG+ G + +++FD M
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISA-----------LVTMYGRCGKLEVGQRVFDRMH 347
Query: 361 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQ 420
RD VSW ++IS Y G+ ++A+ +F E+ +G S TF L C+ +E GK+
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 421 I 421
+
Sbjct: 408 L 408
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 135/277 (48%), Gaps = 33/277 (11%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK------NAISWNGLLAAY 188
A +F MP ++VVSW+AM++ YA+NG A EA F +M + N+++ +L A
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 189 VHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 244
+E+ + D L + L+ + + L +++FD+MH RDVVSWN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 245 TMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
++IS Y G +A +F++ SP T+ +++ G+++E + F+ M
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASP--TPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 299 QKNEIS-----YNAMVAGYVQSNKMDMARELFEAM---PSRNVSSWNTMITGYGQNGDIA 350
+ + I Y MV ++N++D A ++ + M P V W +++ +G++
Sbjct: 414 RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV--WGSLLGSCRIHGNVE 471
Query: 351 QA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
A R+LF + P ++ ++ + YA+ ++E
Sbjct: 472 LAERASRRLFALEP-KNAGNYVLLADIYAEAQMWDEV 507
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 25/263 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRS------SVSYNAMISGYLRNARFSLARD 106
+++ W+ +I+ + +NG ALR F M R + SV+ +++ A +
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 107 LFDKMPQRDLVSW----NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ + +R L S + ++T Y R +L +R+FD M +DVVSWN+++S Y +GY
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 163 ADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLF-----DSKSDWELISWN 213
+A ++F +M A +++ +L A H G +EE RLF D ++ +
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDGDMSQA----KNLFDQSPH 268
C++ + L A K+ M W +++ G++ A + LF P
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP- 485
Query: 269 QDVFTWTAMVSGYVQNGMLDEAR 291
++ + + Y + M DE +
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVK 508
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/539 (40%), Positives = 326/539 (60%), Gaps = 11/539 (2%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----- 298
+ ++ Y + G A+ LFD+ P +D+ +W +++SGY G L + +M
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 299 -QKNEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQAR 353
+ NE+++ +M++ V + R + + V N I YG+ GD+ +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
KLF+ + ++ VSW +I + Q G E+ L F +R G +++TF L +C D+
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
+ L + IHG ++ G+ + ALL +Y K G + +++ VF I D ++W M+A
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
YA HGFG+ A+ FE M G+ PD +T +L+ACSH+GL++ G YF +M+K Y +
Sbjct: 310 AYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
P HY+CM+DLLGR+G L++A L++ MP EP + WGALLGA R++ +T+LG KAAE
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAER 429
Query: 594 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 653
+F++EP + YV+LSN+Y+ASG W DA +R+ M+ G+ + +G S++E NKIHKF V
Sbjct: 430 LFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVV 489
Query: 654 GDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 712
GD HPE ++I L+E+ KM+ E GY S T+ VLHDV E+ KE M+ HSEK+A+AFG
Sbjct: 490 GDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFG 549
Query: 713 ILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+L + PI + KNLR+C DCH K IS I R II+RDS RFHHF +G CSC DYW
Sbjct: 550 LLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 44/307 (14%)
Query: 131 RLGD---ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP------HKNAISW 181
RLG A +LFD MP++D+VSWN+++SGY+ GY + EV +M N +++
Sbjct: 78 RLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTF 137
Query: 182 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 241
+++A V+ G EE C+ G +K +L +V
Sbjct: 138 LSMISACVYGGSKEEG---------------RCIHGLVMKFGVL------------EEVK 170
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM---- 297
N I+ Y + GD++ + LF+ +++ +W M+ ++QNG+ ++ +F+
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 298 PQKNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIAQAR 353
+ ++ ++ A++ + +A+ + + S N ++ Y + G + +
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSS 290
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
+F + D ++W A+++ YA G +A+ F + G S + TF+ L+ C+
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Query: 414 ALELGKQ 420
+E GK
Sbjct: 351 LVEEGKH 357
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 71/391 (18%)
Query: 69 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 128
HC +V ++ R + ++ YLR A LFD+MP+RDLVSWN +++GY
Sbjct: 54 HC----KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 129 NRRLGDARRLFDSMPQKDV------VSWNAMLSGYAQNGYADEAREV------FYQMPHK 176
LG + M +V V++ +M+S G +E R + F +
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC-----LMGGFVKRKM------- 224
+ N + Y G + +C+LF+ S L+SWN L G ++ +
Sbjct: 170 KVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227
Query: 225 -----------LGAARKLFDKMHVRDVVSWNTMI-----SG-----------YAQDGDMS 257
L R D VR + +I SG Y++ G +
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLE 287
Query: 258 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYV 313
+ +F + D WTAM++ Y +G +A F+ M + +++ ++
Sbjct: 288 DSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Query: 314 QSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-W 367
S ++ + FE M R + ++ M+ G++G + A L MP W
Sbjct: 348 HSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVW 407
Query: 368 AAIISG---YAQTGHYEEALNMFIEIK-RDG 394
A++ Y T +A E++ RDG
Sbjct: 408 GALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDV 456
N S+ A+ +C I EL + +H +VVK+ Y G F+G+ L+G Y + G A +
Sbjct: 33 NVSSLIAAVKSCVSI---ELCRLLHCKVVKSVSYRHG-FIGDQLVGCYLRLGHDVCAEKL 88
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAG 514
F+ + E+D+VSWN++I+GY+ G+ + V M +G +P+E+T + ++SAC + G
Sbjct: 89 FDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGG 148
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
+ G + + + V K I+ G+ G L + L ++ + SW +
Sbjct: 149 SKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTM 206
Query: 575 LGASRIHGNTELGEKA 590
+ IH L EK
Sbjct: 207 I---VIHLQNGLAEKG 219
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 182/434 (41%), Gaps = 79/434 (18%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL- 116
++++ ++R GH A ++F+ MP R VS+N++ISGY ++ +M ++
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 117 -----VSWNVMLTGYVRNRRLGDARRL------FDSMPQKDVVSWNAMLSGYAQNGYADE 165
V++ M++ V + R + F + + VV NA ++ Y + G
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTS 187
Query: 166 AREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD---------SKSDWELISWNC-- 214
+ ++F + KN +SWN ++ ++ NG E+ F+ ++ + + +C
Sbjct: 188 SCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCED 247
Query: 215 --------------LMGGFVKRKMLGAA--------------RKLFDKMHVRDVVSWNTM 246
+ GGF K + A +F ++ D ++W M
Sbjct: 248 MGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAM 307
Query: 247 ISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 302
++ YA G A F+ H D T+T +++ +G+++E + +F+ M ++
Sbjct: 308 LAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR 367
Query: 303 IS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGD----IAQA 352
I Y+ MV +S + A L + MP S W ++ D A
Sbjct: 368 IDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAA 427
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
+LF++ P RD ++ + + Y+ +G +++A + +K+ G L +
Sbjct: 428 ERLFELEP-RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG-----------LVRASGC 475
Query: 413 AALELGKQIHGQVV 426
+ +E G +IH VV
Sbjct: 476 SYIEHGNKIHKFVV 489
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 27/280 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR-----SSVSYNAMIS-----GYLR 97
D+ +L+ WN +I H++NG + L FN M RR ++ A++ G +R
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 98 NARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGY 157
A+ +F ++ +L Y + RL D+ +F + D ++W AML+ Y
Sbjct: 253 LAQGIHGLIMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 158 AQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKS-----DWE 208
A +G+ +A + F M H + +++ LL A H+G +EE F++ S D
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGYAQDGDMS----QAKNLF 263
L ++C++ + +L A L +M + W ++ D A+ LF
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLF 431
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 303
+ P +D + + + Y +G+ +A + M QK +
Sbjct: 432 ELEP-RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 338/574 (58%), Gaps = 37/574 (6%)
Query: 235 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
+H R V + YA G + + LF Q+ D+F +TA ++ NG+ D+A +
Sbjct: 59 LHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLY 118
Query: 295 DQMPQK----NEISYNAMVAG----------------------YVQSNKMDM-------- 320
Q+ NE ++++++ YV + +D+
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 321 -ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
A+++F+ MP R++ S MIT Y + G++ AR LFD M +RD VSW +I GYAQ G
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 380 YEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 438
+AL +F ++ +G+ + T ALS C+ I ALE G+ IH V + V
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 439 ALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI-GVK 497
L+ MY KCGS+ EA VF KD+V+WN MIAGYA HG+ + AL +F M+ I G++
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 498 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 557
P +IT +G L AC+HAGL++ G F SM ++Y + P +HY C++ LLGRAG+L+ A +
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 418
Query: 558 LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGR 617
++NM + + W ++LG+ ++HG+ LG++ AE + + NSG+YVLLSN+YA+ G
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGD 478
Query: 618 WADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRR 677
+ +R+ M++ G+ K G S +E++NK+H+F GD H + IY L ++ +++
Sbjct: 479 YEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 538
Query: 678 EGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNA 737
GYV +T VL D+EE EKE L+ HSE+LA+A+G+++ G P+++ KNLRVC DCH
Sbjct: 539 HGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTV 598
Query: 738 IKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
K ISKI GR I++RD +RFHHF +G CSCGD+W
Sbjct: 599 TKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 27/318 (8%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
++ Y + A+ +FD+MP+R LVS M+T Y + + AR LFDSM ++D+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 149 SWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEEA--CRLF 201
SWN M+ GYAQ+G+ ++A +F ++ P + I+ L+A G +E +F
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 202 DSKSDWELISWNC--LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 259
S L C L+ + K L A +F+ +D+V+WN MI+GYA G A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 260 KNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 307
LF++ P F T + G+++E F+ M Q+ I Y
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHA--GLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 308 MVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQ---RD 363
+V+ ++ ++ A E + M S W++++ +GD +++ + + ++
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 364 CVSWAAIISGYAQTGHYE 381
+ + + YA G YE
Sbjct: 463 SGIYVLLSNIYASVGDYE 480
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 182 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 241
GL+ Y G + A ++FD + L+S ++ + K+ + AAR LFD M RD+V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQ-----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
SWN MI GYAQ G + A LF + P D T A +S Q G L+ R +
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR-WIHV 283
Query: 297 MPQKNEISYNAMVAG-----YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 351
+ + I N V Y + ++ A +F P +++ +WN MI GY +G
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 352 ARKLFDMMP-----QRDCVSWAAIISGYAQTGHYEEALNMF 387
A +LF+ M Q +++ + A G E + +F
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 51/260 (19%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-- 111
L+ +I+ + + G+ ++A +F++M R VS+N MI GY ++ + A LF K+
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 112 ---PQRDLVSWNVMLTG---------------YVRNRR--------------------LG 133
P+ D ++ L+ +V++ R L
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP-----HKNAISWNGLLAAY 188
+A +F+ P+KD+V+WNAM++GYA +GY+ +A +F +M I++ G L A
Sbjct: 312 EAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
Query: 189 VHNGRIEEACRLFDSKSDW-----ELISWNCLMGGFVKRKMLGAARKLFDKMHV-RDVVS 242
H G + E R+F+S ++ + CL+ + L A + M++ D V
Sbjct: 372 AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
Query: 243 WNTMISGYAQDGDMSQAKNL 262
W++++ GD K +
Sbjct: 432 WSSVLGSCKLHGDFVLGKEI 451
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/738 (32%), Positives = 399/738 (54%), Gaps = 55/738 (7%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
NA++ Y R + AR +FD+MP RDLVSWN +++GY + +A ++ + +V
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 149 SWNAMLS--------------GYAQNGYA-------------------------DEAREV 169
+ +S G +G+A +AR V
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW---ELISWNCLMGGFVKRKMLG 226
F +M ++++S+N ++ Y+ +EE+ R+F D +L++ + ++ + L
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLS 324
Query: 227 AARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYV 282
A+ +++ M V + N +I YA+ GDM A+++F+ +D +W +++SGY+
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 283 QNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVS 334
Q+G L EA F M Q + I+Y +++ + + + L ++ ++S
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
N +I Y + G++ + K+F M D V+W +IS + G + L + ++++
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ +TF L CA +AA LGK+IH +++ GYE+ +GNAL+ MY KCG + ++
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
VFE + +DVV+W MI Y +G G++AL F M+ G+ PD + + ++ ACSH+G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
L+D G F M Y + P +HY C++DLL R+ ++ +A++ ++ MP +P A+ W ++
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
L A R G+ E E+ + + ++ P + G +L SN YAA +W +R ++D +
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744
Query: 635 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV-EE 693
K GYSW+EV +H F+ GD P+ + IY LE L M +EGY+ + V ++ EE
Sbjct: 745 KNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEE 804
Query: 694 EEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRD 753
EEK ++ HSE+LA+AFG+L G P++V+KNLRVC DCH K ISKIVGR I++RD
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864
Query: 754 SHRFHHFNEGICSCGDYW 771
++RFH F +G CSC D W
Sbjct: 865 ANRFHLFKDGTCSCKDRW 882
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 246/567 (43%), Gaps = 106/567 (18%)
Query: 143 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 202
P K+V WN+++ +++NG EA E FY ++ +S + Y I+ LFD
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALE-FYGKLRESKVSPD----KYTFPSVIKACAGLFD 121
Query: 203 SKS-------------DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 249
++ + +L N L+ + + +L AR++FD+M VRD+VSWN++ISG
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 250 YAQDGDMSQAKNLFDQSPHQ----DVFTWTA----------------------------- 276
Y+ G +A ++ + + D FT ++
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 277 ------MVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF----- 325
+V+ Y++ +AR FD+M ++ +SYN M+ GY++ ++ + +F
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 326 EAMPS-RNVSSW--------------------------------NTMITGYGQNGDIAQA 352
+ P VSS N +I Y + GD+ A
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA 361
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
R +F+ M +D VSW +IISGY Q+G EA+ +F + E + T+ +S +
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 413 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 472
A L+ GK +H +K+G V NAL+ MY KCG +G++ +F + D V+WNT+I
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 473 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 532
+ R G L V M+ V PD T + L C+ G E + + +
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGY 540
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
+ +I++ + G LE + + M +W ++ A ++G GEKA E
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALE 596
Query: 593 MVFKMEPHNSGM----YVLLSNLYAAS 615
ME SG+ V ++ +YA S
Sbjct: 597 TFADME--KSGIVPDSVVFIAIIYACS 621
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 104/182 (57%), Gaps = 1/182 (0%)
Query: 339 MITGYGQNGDIAQARKLFDMM-PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+I Y + A + +F + P ++ W +II +++ G + EAL + +++ S
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
++ TF + CA + E+G ++ Q++ G+E+ FVGNAL+ MY + G + A VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
+ + +D+VSWN++I+GY+ HG+ ++AL ++ +K + PD T+ VL A + ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 518 RG 519
+G
Sbjct: 225 QG 226
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/828 (31%), Positives = 412/828 (49%), Gaps = 108/828 (13%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV-----SYNAMISGYLRNARFSL 103
++ +L +WN VIS++ RN D L F M + + +Y +I + +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 104 ARDLFDKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
+ + + LV N +++ Y + + DA +LFD MP++++VSWN+M+ ++
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 160 NGYADEAREVFYQMPHKNA-----ISWNGLLAAYVHNGRIEE----------ACRLFDSK 204
NG+++E+ + +M +N L+ R E A +L +
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL---R 322
Query: 205 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD--------- 255
D EL+ N LM + K + A+ +F + ++VVSWNTM+ G++ +GD
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 256 ----------------------------MSQAKNLFDQSPHQDV----FTWTAMVSGYVQ 283
+ K L S Q+ A V+ Y +
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP-------------- 329
G L A+ F + K S+NA++ G+ QSN ++ + M
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 330 -------------------------SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
R++ + ++++ Y G++ + LFD M +
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
VSW +I+GY Q G + AL +F ++ G L + C+ + +L LG++ H
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
+K E F+ +L+ MY K GSI +++ VF G++EK SWN MI GY HG K+A
Sbjct: 623 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+ +FE M+ G PD++T +GVL+AC+H+GLI G Y M + + P+ KHY C+ID
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 545 LLGRAGRLEEAQDLM-RNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
+LGRAG+L++A ++ M E W +LL + RIH N E+GEK A +F++EP
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 663
YVLLSNLYA G+W D +R RM ++ ++K G SW+E+ K+ F VG+ F +
Sbjct: 803 NYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEE 862
Query: 664 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 723
I + L++K+ + GY T V HD+ EEEK L+ HSEKLA+ +G++ G IR
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIR 922
Query: 724 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
V KNLR+C DCHNA K ISK++ R I++RD+ RFHHF G+CSCGDYW
Sbjct: 923 VYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 40/416 (9%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 181
++T Y D+R +FD++ K++ WNA++S Y++N DE E F +M IS
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM-----IST 180
Query: 182 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 241
LL + + +AC SD + + G V + L V DV
Sbjct: 181 TDLLPDHFTYPCVIKACA---GMSD---VGIGLAVHGLVVKTGL-----------VEDVF 223
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
N ++S Y G ++ A LFD P +++ +W +M+ + NG +E+ +M ++N
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 302 -EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW-------------NTMITGYGQNG 347
+ ++ VA V + ARE E + V W N ++ Y + G
Sbjct: 284 GDGAFMPDVATLVTVLPV-CARER-EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 348 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCA 405
I A+ +F M ++ VSW ++ G++ G ++ ++ GE + + T A
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
+ C + L K++H +K + V NA + Y KCGS+ A VF GI K V
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
SWN +I G+A+ + +L MK G+ PD T+ +LSACS + G E
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 19/355 (5%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
D V +I+ YA G ++ +FD +++F W A++S Y +N + DE F +M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 299 QKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDI 349
++ +Y ++ + + + + + +V N +++ YG +G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 350 AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA---LNMFIEIKRDGESL-NRSTFSCA 405
A +LFD+MP+R+ VSW ++I ++ G EE+ L +E DG + + +T
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
L CA + LGK +HG VK + + NAL+ MY KCG I A +F+ K+V
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIG--VKPDEITMVGVLSACSHAGLIDRGTE-Y 522
VSWNTM+ G++ G V M G VK DE+T++ + C H + E +
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 523 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 577
YS+ +++ + + + G L AQ + + SW AL+G
Sbjct: 419 CYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGG 470
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 13/254 (5%)
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL- 397
+IT Y G +R +FD + ++ W A+IS Y++ Y+E L FIE+ + L
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+ T+ C + CA ++ + +G +HG VVKTG FVGNAL+ Y G + +A +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVF-ESMKTIG---VKPDEITMVGVLSACSHA 513
+ + E+++VSWN+MI ++ +GF +++ ++ E M+ G PD T+V VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 514 GLIDRGT---EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
I G + + D + ++ ++D+ + G + AQ + + M S
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNA----LMDMYSKCGCITNAQMIFK-MNNNKNVVS 360
Query: 571 WGALLGASRIHGNT 584
W ++G G+T
Sbjct: 361 WNTMVGGFSAEGDT 374
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/537 (41%), Positives = 317/537 (59%), Gaps = 38/537 (7%)
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS 330
+F +++ YV+ +L++A FDQMPQ+N IS+ M++ Y + A EL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 331 RNVS-----------SWNTM-------------------------ITGYGQNGDIAQARK 354
NV S N M I + + G+ A
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
+FD M D + W +II G+AQ + AL +F +KR G ++T + L C +A
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
LELG Q H +VK Y+ + NAL+ MY KCGS+ +A VF ++E+DV++W+TMI+G
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
A++G+ ++AL +FE MK+ G KP+ IT+VGVL ACSHAGL++ G YF SM K Y + P
Sbjct: 334 LAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
+HY CMIDLLG+AG+L++A L+ M EP A +W LLGA R+ N L E AA+ V
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKV 453
Query: 595 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 654
++P ++G Y LLSN+YA S +W +R+RMRD G++K G SW+EV +IH F +G
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIG 513
Query: 655 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 714
D HP+ + L +L ++ GYV T VL D+E E+ E L++HSEKLA+AFG++
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 715 TIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
T+P + IR+ KNLR+C DCH K SK+ R I++RD R+HHF +G CSCGDYW
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 27/344 (7%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM 111
P + N +I+ +++ + A ++F+ MP+R+ +S+ MIS Y + A +L M
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 112 PQRDLVSWNVMLTGYVRN--RRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADE 165
RD V NV V + D R L + ++ DV +A++ +A+ G ++
Sbjct: 154 -LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 166 AREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKML 225
A VF +M +AI WN ++ + N R + A LF I+ + ++
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 226 GAARKLFDKMHV------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 279
A +L + HV +D++ N ++ Y + G + A +F+Q +DV TW+ M+S
Sbjct: 273 LALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 280 GYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAM------- 328
G QNG EA F++M + N I+ ++ + ++ F +M
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 329 PSRNVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 371
P R + MI G+ G + A KL + M + D V+W ++
Sbjct: 393 PVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN----ARFSLARDLF 108
D + WN +I +N D AL +F M R ++ A ++ LR A L
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 109 DKMPQ--RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA 166
+ + +DL+ N ++ Y + L DA R+F+ M ++DV++W+ M+SG AQNGY+ EA
Sbjct: 284 VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 167 REVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMG 217
++F +M N I+ G+L A H G +E+ F S I + C++
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 218 GFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMS----QAKNLFDQSPHQDVF 272
K L A KL ++M D V+W T++ +M AK + P +D
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP-EDAG 462
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQM 297
T+T + + Y + D +M
Sbjct: 463 TYTLLSNIYANSQKWDSVEEIRTRM 487
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+ +T+S + C A+ G I + G+ F+ N L+ MY K + +A+ +F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS------ 511
+ + +++V+SW TMI+ Y++ ++AL + M V+P+ T VL +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 512 --HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
H G+I G E D V + +ID+ + G E+A + M A
Sbjct: 180 MLHCGIIKEGLE------SDVFVRSA------LIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 570 SWGALLG 576
W +++G
Sbjct: 227 VWNSIIG 233
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 354/619 (57%), Gaps = 16/619 (2%)
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
+F N +N L+ +V+N E LF S L +K ++
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 229 RKLFDKMHV--------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
RKL +H DV + +++S Y+ G ++ A LFD+ P + V TWTA+ SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 281 YVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMD----MARELFEAMPSRN 332
Y +G EA F +M + + +++ V +D + + + E +N
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 333 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 392
T++ Y + G + +AR +FD M ++D V+W+ +I GYA +E + +F+++ +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
+ ++ + LS+CA + AL+LG+ + + + T F+ NAL+ MY KCG++
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 453 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 512
+VF+ ++EKD+V N I+G A++G K + VF + +G+ PD T +G+L C H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 513 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 572
AGLI G +F +++ Y++ + +HY CM+DL GRAG L++A L+ +MP P A WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 573 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 632
ALL R+ +T+L E + + +EP N+G YV LSN+Y+ GRW +A +R M G
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 633 VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVE 692
++K+ GYSW+E++ K+H+F D HP D+IYA LE+L +MR G+V +T+ V DVE
Sbjct: 547 MKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVE 606
Query: 693 EEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILR 752
EEEKE +L YHSEKLAVA G+++ G+ IRV+KNLRVC DCH +K ISKI R I++R
Sbjct: 607 EEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVR 666
Query: 753 DSHRFHHFNEGICSCGDYW 771
D++RFH F G CSC DYW
Sbjct: 667 DNNRFHCFTNGSCSCNDYW 685
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 154/373 (41%), Gaps = 78/373 (20%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ ++S + +G + A ++F+ +P RS V++ A+ SGY + R A DLF KM
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 113 ---------------------------------------QRDLVSWNVMLTGYVRNRRLG 133
Q++ ++ Y + ++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYV 189
AR +FDSM +KD+V+W+ M+ GYA N + E E+F QM +N S G L++
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 190 HNGRI---EEACRLFDSKSDW-ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
G + E L D L N L+ + K + ++F +M +D+V N
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 246 MISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
ISG A++G + + +F Q+ D T+ ++ G V G++ + FF
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF------- 437
Query: 302 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ 361
NA+ Y R V + M+ +G+ G + A +L MP
Sbjct: 438 ----NAISCVYAL---------------KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478
Query: 362 R-DCVSWAAIISG 373
R + + W A++SG
Sbjct: 479 RPNAIVWGALLSG 491
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/696 (35%), Positives = 380/696 (54%), Gaps = 39/696 (5%)
Query: 89 NAMISGYLRNARFSLARDL--FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 146
NA+ + +R R AR + D P L N ++ Y + AR + P ++
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTPARN 72
Query: 147 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 206
VVSW +++SG AQNG+ A F++M + + + + + RL +
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAF---KAVASLRLPVTGKQ 129
Query: 207 WELISWNCLMGGFVKRKMLG-AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
++ C G + +G +A ++ K +RD A+ LFD+
Sbjct: 130 IHALAVKC---GRILDVFVGCSAFDMYCKTRLRD------------------DARKLFDE 168
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMA 321
P +++ TW A +S V +G EA F + + N I++ A + +++
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 322 REL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
+L + +VS N +I YG+ I + +F M ++ VSW ++++ Y Q
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
E+A +++ ++D + S LS CA +A LELG+ IH VK E FVG
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM--KTIG 495
+AL+ MY KCG I ++ F+ + EK++V+ N++I GYA G AL +FE M + G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
P+ +T V +LSACS AG ++ G + F SM Y + P ++HY+C++D+LGRAG +E A
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 556 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
+ ++ MP +P + WGAL A R+HG +LG AAE +FK++P +SG +VLLSN +AA+
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528
Query: 616 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 675
GRWA+A +R ++ VG++K GYSW+ V+N++H F D H I L +L +M
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Query: 676 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 735
GY KL L+D+EEEEK + +HSEKLA+AFG+L++P PIR+ KNLR+C DCH
Sbjct: 589 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 648
Query: 736 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+ K +S V R II+RD++RFH F +GICSC DYW
Sbjct: 649 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 177/404 (43%), Gaps = 93/404 (23%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
D P L N +I+ + + H +SA V P R+ VS+ ++ISG +N FS A
Sbjct: 37 DSPPPPFLA-NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVE 95
Query: 108 FDKMPQRDLV--------------SWNVMLTG-------------------------YVR 128
F +M + +V S + +TG Y +
Sbjct: 96 FFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCK 155
Query: 129 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGL 184
R DAR+LFD +P++++ +WNA +S +G EA E F + H N+I++
Sbjct: 156 TRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAF 215
Query: 185 LAA---YVH-NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 240
L A ++H N ++ + S D ++ N L+ + K K + ++ +F +M ++
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQS---------------------------------- 266
VSW ++++ Y Q+ + +A L+ +S
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 267 -----PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA 321
+ +F +A+V Y + G ++++ FD+MP+KN ++ N+++ GY ++DMA
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 322 RELFEAM------PSRNVSSWNTMITGYGQNGDIAQARKLFDMM 359
LFE M P+ N ++ ++++ + G + K+FD M
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 29/269 (10%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRRSSV-SYNAMISGYLRN----ARFSLARDL-- 107
+ W +++ +++N H D V R+ V + + MIS L A L R +
Sbjct: 276 VSWCSLVAAYVQN-HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 108 --FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADE 165
+R + + ++ Y + + D+ + FD MP+K++V+ N+++ GYA G D
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDM 394
Query: 166 AREVFYQM------PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNC 214
A +F +M P N +++ LL+A G +E ++FDS I ++C
Sbjct: 395 ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC 454
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTM-----ISGYAQDGDMSQAKNLFDQSPH 268
++ + M+ A + KM ++ +S W + + G Q G ++ A+NLF P
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA-AENLFKLDP- 512
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
+D + + + G EA T +++
Sbjct: 513 KDSGNHVLLSNTFAAAGRWAEANTVREEL 541
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 293/436 (67%), Gaps = 1/436 (0%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
N+++ Y GD+A A K+FD MP++D V+W ++I+G+A+ G EEAL ++ E+ G
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 397 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 456
+ T LS CA I AL LGK++H ++K G N LL +Y +CG + EA +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK-TIGVKPDEITMVGVLSACSHAGL 515
F+ + +K+ VSW ++I G A +GFGK+A+ +F+ M+ T G+ P EIT VG+L ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+ G EYF M ++Y + P +H+ CM+DLL RAG++++A + +++MP +P W LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 576 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 635
GA +HG+++L E A + ++EP++SG YVLLSN+YA+ RW+D +R +M GV+K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 636 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 695
V G+S VEV N++H+F +GD HP+ D IYA L+E+ ++R EGYV V DVEEEE
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 696 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 755
KE+ + YHSEK+A+AF +++ P PI V+KNLRVC DCH AIK +SK+ R I++RD
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 756 RFHHFNEGICSCGDYW 771
RFHHF G CSC DYW
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 471
+A + LG+ IH V+++G+ + +V N+LL +Y CG + A VF+ + EKD+V+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 472 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 531
I G+A +G ++AL ++ M + G+KPD T+V +LSAC+ G + G M K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 532 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 591
+T + ++DL R GR+EEA+ L M + + SW +L+ ++G G++A
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAI 175
Query: 592 EMVFKME 598
E+ ME
Sbjct: 176 ELFKYME 182
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 19/248 (7%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK--- 176
N +L Y + A ++FD MP+KD+V+WN++++G+A+NG +EA ++ +M K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 177 -NAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKL 231
+ + LL+A G + R + L S N L+ + + + A+ L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 232 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD-----VFTWTAMVSGYVQNGM 286
FD+M ++ VSW ++I G A +G +A LF + T+ ++ GM
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 287 LDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMI 340
+ E +F +M ++ +I + MV ++ ++ A E ++MP + NV W T++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 341 TGYGQNGD 348
+GD
Sbjct: 267 GACTVHGD 274
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 19/229 (8%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLARD 106
+ DL+ WN VI+ NG + AL ++ M + + +++S + +L +
Sbjct: 51 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 110
Query: 107 LFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ M + R+L S NV+L Y R R+ +A+ LFD M K+ VSW +++ G A NG+
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 170
Query: 163 ADEAREVFYQMPHKNA-----ISWNGLLAAYVHNGRIEEACRLF-----DSKSDWELISW 212
EA E+F M I++ G+L A H G ++E F + K + + +
Sbjct: 171 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 230
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAK 260
C++ + + A + M ++ +VV W T++ GD A+
Sbjct: 231 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 279
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 335/572 (58%), Gaps = 25/572 (4%)
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQ-DGDMSQ-AKNLF-----DQSPHQDVFTWTAM 277
L A K+F++M R+ SWNT+I G+++ D D + A LF D+ + FT+ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 278 VSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELF-------- 325
+ + G + E + + +E + +V YV M AR LF
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 326 -EAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
M R + WN MI GY + GD AR LFD M QR VSW +ISGY+ G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
+++A+ +F E+K+ N T L + + +LELG+ +H +G +G+A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
L+ MY KCG I +A VFE + ++V++W+ MI G+A HG A+ F M+ GV+P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM 559
++ + +L+ACSH GL++ G YF M + P +HY CM+DLLGR+G L+EA++ +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 560 RNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWA 619
NMP +P W ALLGA R+ GN E+G++ A ++ M PH+SG YV LSN+YA+ G W+
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 620 DAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREG 679
+ MR RM++ ++K G S +++ +H+F V D HP+ I + L E+ K+R G
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Query: 680 YVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIK 739
Y T VL ++EEE+KE++L YHSEK+A AFG+++ G+PIR++KNLR+CEDCH++IK
Sbjct: 555 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 614
Query: 740 HISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
ISK+ R I +RD RFHHF +G CSC DYW
Sbjct: 615 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 50/285 (17%)
Query: 348 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE--ALNMFIEIKRDG-ESLNRSTFSC 404
D+ A K+F+ MPQR+C SW II G++++ + A+ +F E+ D NR TF
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGIEEK 463
L CA ++ GKQIHG +K G+ FV + L+ MY CG + +A +F + I EK
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 464 D--------------------------------------------VVSWNTMIAGYARHG 479
D VVSWNTMI+GY+ +G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 480 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 539
F K A+ VF MK ++P+ +T+V VL A S G ++ G E+ + +D +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 540 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 584
+ +ID+ + G +E+A + +P E +W A++ IHG
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHGQA 356
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 91 MISGYLRNARFSLARDLFDK----MPQR-----DLVSWNVMLTGYVRNRRLGD---ARRL 138
++ G++++AR +++ +K M R ++V WNVM+ GY+R LGD AR L
Sbjct: 174 VMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR---LGDCKAARML 230
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRI 194
FD M Q+ VVSWN M+SGY+ NG+ +A EVF +M N ++ +L A G +
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 195 E--EACRLF--DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 250
E E L+ DS + + + L+ + K ++ A +F+++ +V++W+ MI+G+
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350
Query: 251 AQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-- 304
A G A + F + V + +++ G+++E R +F QM + +
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPR 410
Query: 305 ---YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARK----LF 356
Y MV +S +D A E MP + + W ++ G++ ++ L
Sbjct: 411 IEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILM 470
Query: 357 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
DM+P D ++ A+ + YA G++ E M + +K
Sbjct: 471 DMVPH-DSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 191/429 (44%), Gaps = 66/429 (15%)
Query: 124 TGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN--GYADEAREVFYQM-----PHK 176
T + +R L A ++F+ MPQ++ SWN ++ G++++ A A +FY+M
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDW-----ELISWNC----LMGGFVKRKMLGA 227
N ++ +L A G+I+E ++ + E + N +M GF+K +
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 228 ARKLFDKMHV-------RD--VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 278
+ + +K V RD +V WN MI GY + GD A+ LFD+ + V +W M+
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 279 SGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
SGY NG +A F +M + N ++ +++ + +++ L +
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 306
Query: 335 S----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
+ +I Y + G I +A +F+ +P+ + ++W+A+I+G+A G +A++ F ++
Sbjct: 307 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 366
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
++ G + + L+ C+ +E G++ Q+V
Sbjct: 367 RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSV---------------------- 404
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
+G+E + + + M+ R G +A E + + +KPD++ +L AC
Sbjct: 405 -------DGLEPR-IEHYGCMVDLLGRSGLLDEAE---EFILNMPIKPDDVIWKALLGAC 453
Query: 511 SHAGLIDRG 519
G ++ G
Sbjct: 454 RMQGNVEMG 462
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 190/441 (43%), Gaps = 89/441 (20%)
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRN--RRLGDARRLFDSMPQKDVVSWN-----AMLSG 156
A +F++MPQR+ SWN ++ G+ + + A LF M + V N ++L
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 157 YAQNGYADEAREVFYQMPHKNAISW---------NGLLAAYVHNGRIEEACRLF------ 201
A+ G E +++ H A+ + + L+ YV G +++A LF
Sbjct: 138 CAKTGKIQEGKQI-----HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 202 --------DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 253
K D E++ WN ++ G+++ AAR LFDKM R VVSWNTMISGY+ +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 254 GDMSQAKNLFDQSPHQDV---------------------------------------FTW 274
G A +F + D+
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
+A++ Y + G++++A F+++P++N I+++AM+ G+ + A + F M V
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 335 ----SWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALN 385
++ ++T G + + R+ F M D + + ++ ++G +EA
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK-TGYETGCFVGNALLGMY 444
+ + + + + L C +E+GK++ ++ +++G +V AL MY
Sbjct: 433 FILNMPIKPDDV---IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV--ALSNMY 487
Query: 445 FKCGSIGEANDVFEGIEEKDV 465
G+ E +++ ++EKD+
Sbjct: 488 ASQGNWSEVSEMRLRMKEKDI 508
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 176/404 (43%), Gaps = 78/404 (19%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN--ARFSLARDLFDK 110
++L++ H R+ D A ++FN MP+R+ S+N +I G+ + + +A LF +
Sbjct: 60 EILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYE 117
Query: 111 MPQRDLVSWNV----------------------------------------MLTGYVRNR 130
M + V N ++ YV
Sbjct: 118 MMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG 177
Query: 131 RLGDARRLF-DSMPQKD-------------VVSWNAMLSGYAQNGYADEAREVFYQMPHK 176
+ DAR LF ++ +KD +V WN M+ GY + G AR +F +M +
Sbjct: 178 FMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQR 237
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL-ISWNCLMGGFVKRKMLGAARKLFDKM 235
+ +SWN +++ Y NG ++A +F ++ ++ L+ LG+ +L + +
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL-ELGEWL 296
Query: 236 HVR--------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 287
H+ D V + +I Y++ G + +A ++F++ P ++V TW+AM++G+ +G
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQA 356
Query: 288 DEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNT 338
+A F +M Q ++++Y ++ ++ R F M S + + +
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416
Query: 339 MITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHYE 381
M+ G++G + +A + MP + D V W A++ G+ E
Sbjct: 417 MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 23/270 (8%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLF- 108
++ WN +IS + NG A+ VF M R + V+ +++ R L L
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL 298
Query: 109 ---DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADE 165
D + D V + ++ Y + + A +F+ +P+++V++W+AM++G+A +G A +
Sbjct: 299 YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGD 358
Query: 166 AREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLM 216
A + F +M +++ LL A H G +EE R F + + + C++
Sbjct: 359 AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMV 418
Query: 217 GGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKN----LFDQSPHQDV 271
+ +L A + M ++ D V W ++ G++ K L D PH D
Sbjct: 419 DLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPH-DS 477
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
+ A+ + Y G E +M +K+
Sbjct: 478 GAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/607 (37%), Positives = 335/607 (55%), Gaps = 50/607 (8%)
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPH 268
LM + K + +ARK+FD++ R+V+ N MI Y +G + +F + P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 269 Q---------------------------------DVFTWTAMVSGYVQNGMLDEARTFFD 295
+F +VS Y + G L EAR D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 296 QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNG--DI 349
+M +++ +S+N++V GY Q+ + D A E+ M S +S + +++ ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 350 AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTC 409
+ +F M ++ VSW +I Y + EA+ ++ ++ DG + + + L C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 410 ADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWN 469
D +AL LGK+IHG + + + NAL+ MY KCG + +A DVFE ++ +DVVSW
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 470 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 529
MI+ Y G G A+ +F ++ G+ PD I V L+ACSHAGL++ G F M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 530 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 589
Y +TP +H CM+DLLGRAG+++EA +++M EP WGALLGA R+H +T++G
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 590 AAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIH 649
AA+ +F++ P SG YVLLSN+YA +GRW + N+R+ M+ G++K G S VEV IH
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 650 KFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 709
F VGD HP+ D IY L+ L KM+ GYV ++ LHDVEEE+KE L HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 710 AFGILTIP-----AGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGI 764
F ++ + IR+ KNLR+C DCH A K IS+I R II+RD++RFH F G+
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 765 CSCGDYW 771
CSCGDYW
Sbjct: 680 CSCGDYW 686
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 173/438 (39%), Gaps = 101/438 (23%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSL 103
++ + +++ N +I +++ NG ++VF TM R ++ ++ + +
Sbjct: 99 EIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158
Query: 104 ARDLFDKMPQRDLVSW----NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
R + + L S N +++ Y + L +AR + D M ++DVVSWN+++ GYAQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 160 NGYADEAREV-------------------------------------FYQMPHKNAISWN 182
N D+A EV F++M K+ +SWN
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWN 278
Query: 183 GLLAAYVHNGRIEEACRLF----------DSKS---------DWELISWNCLMGGFVKRK 223
++ Y+ N EA L+ D+ S D +S + G+++RK
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 224 --------------------MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
L AR +F+ M RDVVSW MIS Y G A LF
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398
Query: 264 ----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQ 314
D D + ++ G+L+E R+ F M +I+ MV +
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458
Query: 315 SNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGD----IAQARKLFDMMPQRDCVSWAA 369
+ K+ A + M N W ++ + D + A KLF + P++ +
Sbjct: 459 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS--GYYV 516
Query: 370 IISG-YAQTGHYEEALNM 386
++S YA+ G +EE N+
Sbjct: 517 LLSNIYAKAGRWEEVTNI 534
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKD 464
L T DI L + +H +++ +G L+ Y + A VF+ I E++
Sbjct: 48 VLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 465 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFY 524
V+ N MI Y +GF + + VF +M V+PD T VL ACS +G I G +
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 525 SMNKDYSVTPSSKHYT--CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
S K V SS + ++ + G+ G L EA+ ++ M SW +L+
Sbjct: 165 SATK---VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 340/557 (61%), Gaps = 9/557 (1%)
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS------PHQDVFTWTAM 277
+LG A +F ++ ++ +N +I ++ + S+A + Q P F +
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 278 VSGYVQNGMLDE-ARTFFDQMPQKNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSS 335
S ++ ++ E + + +N++ N++V Y + A +F M R+V S
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
W +M+ GY + G + AR++FD MP R+ +W+ +I+GYA+ +E+A+++F +KR+G
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
N + +S+CA + ALE G++ + VVK+ +G AL+ M+++CG I +A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
VFEG+ E D +SW+++I G A HG +A+ F M ++G P ++T VLSACSH GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+++G E + +M KD+ + P +HY C++D+LGRAG+L EA++ + M +P A GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 576 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 635
GA +I+ NTE+ E+ M+ K++P +SG YVLLSN+YA +G+W ++R M++ V+K
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 636 VTGYSWVEVQNKIHKFTVG-DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEE 694
G+S +E+ KI+KFT+G D HPE +I EE+ K+R GY +T DV+EE
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEE 545
Query: 695 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDS 754
EKE + HSEKLA+A+G++ G IR++KNLRVCEDCH K IS++ GR +I+RD
Sbjct: 546 EKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDR 605
Query: 755 HRFHHFNEGICSCGDYW 771
+RFHHF G+CSC DYW
Sbjct: 606 NRFHHFRNGVCSCRDYW 622
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 165/342 (48%), Gaps = 19/342 (5%)
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
LG A +F + ++ +N ++ ++ +A + QM K+ I + + ++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIK 125
Query: 192 GRIEEACRLFDSKSDWELISW---------NCLMGGFVKRKMLGAARKLFDKMHVRDVVS 242
E C L ++ +++ + N L+ + + AA ++F +M RDVVS
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 243 WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 302
W +M++GY + G + A+ +FD+ PH+++FTW+ M++GY +N ++A F+ M ++
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 303 ISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT--------MITGYGQNGDIAQARK 354
++ ++ + S A E E V S T ++ + + GDI +A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
+F+ +P+ D +SW++II G A GH +A++ F ++ G TF+ LS C+
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 415 LELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEAND 455
+E G +I+ + K G E ++ M + G + EA +
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAEN 407
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 146/317 (46%), Gaps = 24/317 (7%)
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
Q D+ N ++ Y + A R+F M +DVVSW +M++GY + G + ARE+F +
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR-KMLGA---- 227
MPH+N +W+ ++ Y N E+A LF+ +++ +M + LGA
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 228 --ARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 284
A + K H+ +++ ++ + + GD+ +A ++F+ P D +W++++ G +
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 285 GMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSS 335
G +A +F QM ++++ A+++ ++ E++E M + +
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG----YAQTGHYEEALNMFIEIK 391
+ ++ G+ G +A+A M + + G Y T E NM I++K
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 392 RDGES---LNRSTFSCA 405
+ L + ++CA
Sbjct: 449 PEHSGYYVLLSNIYACA 465
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ N ++ + G +A R+F M R VS+ +M++GY + AR++FD+MP
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
R+L +W++M+ GY +N A LF+ M ++ VV+
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA----------------------- 247
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAA 228
N ++++ H G +E R ++ S LI L+ F + + A
Sbjct: 248 ----NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 229 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH-----QDVFTWTAMVSGYVQ 283
+F+ + D +SW+++I G A G +A + F Q +DV T+TA++S
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV-TFTAVLSACSH 362
Query: 284 NGMLDEARTFFDQMPQKNEI 303
G++++ ++ M + + I
Sbjct: 363 GGLVEKGLEIYENMKKDHGI 382
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/536 (41%), Positives = 340/536 (63%), Gaps = 9/536 (1%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 303
N +I+ Y++ ++ F+ SP + TW++++S + QN + + F +M N
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 304 SYNAMVAGYVQS----NKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKL 355
+ ++ +S ++ D+ R + + +V ++++ Y + G+I ARK+
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
FD MPQR+ V+W+ ++ GYAQ G EEAL +F E + ++N +FS +S CA+ L
Sbjct: 174 FDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLL 233
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
ELG+QIHG +K+ +++ FVG++L+ +Y KCG A VF + K++ WN M+ Y
Sbjct: 234 ELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY 293
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
A+H ++ + +F+ MK G+KP+ IT + VL+ACSHAGL+D G YF M K+ + P+
Sbjct: 294 AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPT 352
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
KHY ++D+LGRAGRL+EA +++ NMP +P + WGALL + +H NTEL AA+ VF
Sbjct: 353 DKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVF 412
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 655
++ P +SGM++ LSN YAA GR+ DA R +RD G +K TG SWVE +NK+H F G+
Sbjct: 413 ELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGE 472
Query: 656 CFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILT 715
H + IY L EL +M + GY++ T VL +V+ +EK ++YHSE+LA+AFG++T
Sbjct: 473 RRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLIT 532
Query: 716 IPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
PA RPIRV+KNLRVC DCHNAIK +S R+II+RD++RFH F +G CSC DYW
Sbjct: 533 FPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 197/447 (44%), Gaps = 49/447 (10%)
Query: 61 ISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN 120
+ H N CD L + R S + GY+ + SL +P LV+ N
Sbjct: 10 VPCHNYNQICDLLL----SSARTRSTIKGLQLHGYVVKSGLSL-------IP---LVA-N 54
Query: 121 VMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 180
++ Y +++ D+RR F+ PQK +W++++S +AQN + E +M N
Sbjct: 55 NLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRP 114
Query: 181 WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 240
+ +L + + I C + S +CL + + +D DV
Sbjct: 115 DDHVLPSATKSCAILSRCDIGRS--------VHCL-----------SMKTGYDA----DV 151
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
++++ YA+ G++ A+ +FD+ P ++V TW+ M+ GY Q G +EA F + +
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 301 ----NEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQA 352
N+ S++++++ S +++ R++ ++ + +++++ Y + G A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
++F+ +P ++ W A++ YAQ H ++ + +F +K G N TF L+ C+
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 413 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS-WNTM 471
++ G+ Q+ ++ E +L+ M + G + EA +V + S W +
Sbjct: 332 GLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 472 IAGYARHGFGKQALMVFESMKTIGVKP 498
+ H L F + K + P
Sbjct: 392 LTSCTVH--KNTELAAFAADKVFELGP 416
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 141/290 (48%), Gaps = 22/290 (7%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA----REVF 170
D+ + ++ Y + + AR++FD MPQ++VV+W+ M+ GYAQ G +EA +E
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 171 YQMPHKNAISWNGLLAAYVHNGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLG 226
++ N S++ +++ ++ +E ++ S D + L+ + K +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYV 282
A ++F+++ V+++ WN M+ YAQ + LF + + T+ +++
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 283 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WN 337
G++DE R +FDQM + + Y ++V ++ ++ A E+ MP S W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 338 TMITG--YGQNGDIA--QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
++T +N ++A A K+F++ P + ++ + YA G +E+A
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMH-ISLSNAYAADGRFEDA 438
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 136/329 (41%), Gaps = 54/329 (16%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLR-----NARFSLAR 105
D D+ + ++ + + G A ++F+ MP+R+ V+++ M+ GY + A +
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Query: 106 DLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRL----FDSMPQKDVVSWNAMLSGYAQNG 161
LF+ + D S++ +++ + L R++ S ++++S Y++ G
Sbjct: 208 ALFENLAVNDY-SFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 162 YADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK 221
+ A +VF ++P KN WN +L AY + ++ LF K
Sbjct: 267 VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELF-------------------K 307
Query: 222 RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT----WTAM 277
R L + F +++ +++ + G + + + FDQ + + ++
Sbjct: 308 RMKLSGMKPNF--------ITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASL 359
Query: 278 VSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMAR----ELFEAMPSRN 332
V + G L EA MP E + A++ ++A ++FE P
Sbjct: 360 VDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGP--- 416
Query: 333 VSSWN--TMITGYGQNG---DIAQARKLF 356
VSS ++ Y +G D A+ARKL
Sbjct: 417 VSSGMHISLSNAYAADGRFEDAAKARKLL 445
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 333/557 (59%), Gaps = 11/557 (1%)
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-----SPHQDVFTWTAMVS 279
L A+ +FD D WN MI G++ + ++ L+ + +PH + +T+ +++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLK 123
Query: 280 GYVQNGMLDEARTFFDQMPQ---KNEI-SYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 335
+E Q+ + +N++ + N+++ Y + +A LF+ +P + S
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
WN++I GY + G + A LF M +++ +SW +ISGY Q +EAL +F E++
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
+ + + ALS CA + ALE GK IH + KT +G L+ MY KCG + EA +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
VF+ I++K V +W +I+GYA HG G++A+ F M+ +G+KP+ IT VL+ACS+ GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
++ G FYSM +DY++ P+ +HY C++DLLGRAG L+EA+ ++ MP +P A WGALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 576 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 635
A RIH N ELGE+ E++ ++P++ G YV +N++A +W A R M++ GV K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 636 VTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD-VEEE 694
V G S + ++ H+F GD HPE ++I + + K+ GYV + +L D V+++
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 695 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDS 754
E+E ++ HSEKLA+ +G++ G IR++KNLRVC+DCH K ISKI R I++RD
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 755 HRFHHFNEGICSCGDYW 771
RFHHF +G CSCGDYW
Sbjct: 604 TRFHHFRDGKCSCGDYW 620
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 173/368 (47%), Gaps = 30/368 (8%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYV 189
A+ +FD + D WN M+ G++ + + + ++ +M PH NA ++ LL A
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACS 126
Query: 190 HNGRIEEACRLFD--SKSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
+ EE ++ +K +E + + N L+ + A LFD++ D VSWN+
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKN 301
+I GY + G M A LF + ++ +WT M+SGYVQ M EA F +M + +
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 302 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN----TMITGYGQNGDIAQARKLFD 357
+S ++ Q ++ + + + + + +I Y + G++ +A ++F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 358 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 417
+ ++ +W A+ISGYA GH EA++ F+E+++ G N TF+ L+ C+ +E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 418 GKQIHGQVVK------TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNT 470
GK I + + T GC V LLG + G + EA + + K + V W
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVD--LLG---RAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 471 MIAGYARH 478
++ H
Sbjct: 422 LLKACRIH 429
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N++I+ Y F LA LFD++P+ D VSWN ++ GYV+ ++ A LF M +K+ +
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI 213
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSK 204
SW M+SGY Q EA ++F++M + + +S L+A G +E+
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG------- 266
Query: 205 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLF 263
W +K +R D V +I YA+ G+M +A +F
Sbjct: 267 ------KW---------------IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMD 319
+ V WTA++SGY +G EA + F +M + N I++ A++ + ++
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 320 MARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISG 373
+ +F +M + + ++ G+ G + +A++ MP + + V W A++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
+ +PD + WN VI +++ G D AL +F M ++++S+ MISGY++ A LF
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 109 DKMPQRDLVSWNVMLTGYVRN-RRLGDARR-------LFDSMPQKDVVSWNAMLSGYAQN 160
+M D+ NV L + +LG + L + + D V ++ YA+
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 220
G +EA EVF + K+ +W L++ Y ++G EA + F+
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA------------------ISKFM 337
Query: 221 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWT 275
+ + +G +V+++ +++ + G + + K +F D + + +
Sbjct: 338 EMQKMGIK---------PNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQK-NEISYNAMVAGYVQSNKMDMARELFEAM 328
+V + G+LDEA+ F +MP K N + + A++ +++ E+ E +
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 58/275 (21%)
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS---IGEANDVF 457
T SC L C+ L KQIH +++KTG + L S + A VF
Sbjct: 17 TMSC-LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS------ 511
+G + D WN MI G++ +++L++++ M + T +L ACS
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 512 -----HAGLIDRGTEY-FYSMNK---DYSVT---------------PSSKHYTCMIDLLG 547
HA + G E Y++N Y+VT P + +I
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM-----EPHNS 602
+AG+++ A L R M E A SW ++ + ++ ++A ++ +M EP N
Sbjct: 193 KAGKMDIALTLFRKMA-EKNAISWTTMISG---YVQADMNKEALQLFHEMQNSDVEPDN- 247
Query: 603 GMYVLLSNLYAA--------SGRWADAGNMRSRMR 629
V L+N +A G+W + ++R+R
Sbjct: 248 ---VSLANALSACAQLGALEQGKWIHSYLNKTRIR 279
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 311/503 (61%), Gaps = 2/503 (0%)
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS 330
+F T ++ Y G ++ AR FD+M Q N +++NA++ + N + ARE+F+ M
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
RN +SWN M+ GY + G++ A+++F MP RD VSW+ +I G A G + E+ F E+
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
+R G S N + + LS C+ + E GK +HG V K GY V NAL+ MY +CG++
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 451 GEANDVFEGIEEKD-VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
A VFEG++EK +VSW +MIAG A HG G++A+ +F M GV PD I+ + +L A
Sbjct: 321 PMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHA 380
Query: 510 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
CSHAGLI+ G +YF M + Y + P +HY CM+DL GR+G+L++A D + MP P A
Sbjct: 381 CSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAI 440
Query: 570 SWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMR 629
W LLGA HGN EL E+ + + +++P+NSG VLLSN YA +G+W D ++R M
Sbjct: 441 VWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMI 500
Query: 630 DVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKLVL 688
++K T +S VEV ++KFT G+ + L+E+ L+++ E GY L
Sbjct: 501 VQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASAL 560
Query: 689 HDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRL 748
+DVEEEEKE + HSEKLA+AF + + G IR++KNLR+C DCH +K SK+ G
Sbjct: 561 YDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVE 620
Query: 749 IILRDSHRFHHFNEGICSCGDYW 771
I++RD +RFH F +G CSC DYW
Sbjct: 621 ILVRDRNRFHSFKDGSCSCRDYW 643
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 180/401 (44%), Gaps = 61/401 (15%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN--- 191
ARRL P+ D +N ++ GY+++ + VF +M K + + A+V
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 192 -------------------------------------GRIEEACRLFDSKSDWELISWNC 214
G +E A ++FD L++WN
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
++ + + AR++FDKM VR+ SWN M++GY + G++ AK +F + PH+D +W
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELF----E 326
+ M+ G NG +E+ +F ++ + NE+S +++ QS + + L +
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-VSWAAIISGYAQTGHYEEALN 385
A S VS N +I Y + G++ AR +F+ M ++ C VSW ++I+G A G EEA+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY------ETGCFVGNA 439
+F E+ G + + +F L C+ +E G+ ++ + + GC V
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV--- 414
Query: 440 LLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 479
+Y + G + +A D + + W T++ + HG
Sbjct: 415 --DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 68 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 127
G + A +VF+ M + + V++NA+I+ R + AR++FDKM R+ SWNVML GY+
Sbjct: 155 GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 128 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNG 183
+ L A+R+F MP +D VSW+ M+ G A NG +E+ F ++ N +S G
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 184 LLAAYVHNGRIEEACRL--FDSKS--DWELISWNCLMGGFVKRKMLGAARKLFDKMH-VR 238
+L+A +G E L F K+ W + N L+ + + + AR +F+ M R
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
+VSW +MI+G A G +A LF++ D ++ +++ G+++E +F
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 295 DQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVS-SWNTMITGYGQNGD 348
+M + I Y MV Y +S K+ A + MP + W T++ +G+
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 349 IAQARKLFDMMPQRD 363
I A ++ + + D
Sbjct: 455 IELAEQVKQRLNELD 469
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 136/350 (38%), Gaps = 100/350 (28%)
Query: 315 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
S+ + AR L P + +NT++ GY ++ + P
Sbjct: 52 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDE-----------PH------------- 87
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRS-TFSCALSTCADIAALELGKQIHGQVVKTGYETG 433
++ +F+E+ R G S +F+ + + +L G Q+H Q +K G E+
Sbjct: 88 -------NSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESH 140
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV--------------------------- 466
FVG L+GMY CG + A VF+ + + ++V
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 467 ----SWNTMIAGY-------------------------------ARHGFGKQALMVFESM 491
SWN M+AGY A +G ++ + F +
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 550
+ G+ P+E+++ GVLSACS +G + G + + YS S + +ID+ R G
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN--ALIDMYSRCG 318
Query: 551 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
+ A+ + M + SW +++ +HG GE+A + +M +
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ---GEEAVRLFNEMTAY 365
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 334/554 (60%), Gaps = 9/554 (1%)
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 286
+A ++ +M ++ +S N +I+GY + GD+ A+ +FD+ P + + TW AM++G +Q
Sbjct: 12 SAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 287 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNT 338
+E + F +M +E + ++ +G + + +++ + ++ ++
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
+ Y +NG + + MP R+ V+W +I G AQ G E L ++ +K G N
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
+ TF LS+C+D+A G+QIH + +K G + V ++L+ MY KCG +G+A F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLID 517
E++D V W++MI+ Y HG G +A+ +F +M + ++ +E+ + +L ACSH+GL D
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 577
+G E F M + Y P KHYTC++DLLGRAG L++A+ ++R+MP + W LL A
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 578 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 637
IH N E+ ++ + + +++P++S YVLL+N++A++ RW D +R MRD V+K
Sbjct: 372 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 431
Query: 638 GYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKE 697
G SW E + ++H+F +GD + IY++L+EL L+M+ +GY T VLHD++EEEKE
Sbjct: 432 GISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKE 491
Query: 698 HMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 757
L HSEKLAVAF ++ +P G PIR+IKNLRVC DCH A K+IS I R I LRD RF
Sbjct: 492 SDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRF 551
Query: 758 HHFNEGICSCGDYW 771
HHF G CSCGDYW
Sbjct: 552 HHFINGKCSCGDYW 565
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 198/435 (45%), Gaps = 41/435 (9%)
Query: 92 ISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN 151
+S Y + F A ++ +M +++ +S N+++ GYVR L +AR++FD MP + + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 152 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG-------RIEEACRLFDSK 204
AM++G Q + +E +F +M H S + V +G I + + K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 205 SDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 262
E L+ + L +++ L + M VR++V+WNT+I G AQ+G
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-------- 171
Query: 263 FDQSPHQDVFTWTAM-VSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA 321
P ++ + M +SG N + TF + ++++ ++ +
Sbjct: 172 ---CPETVLYLYKMMKISGCRPNKI-----TFVTVLSSCSDLA--------IRGQGQQIH 215
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
E + S V+ +++I+ Y + G + A K F D V W+++IS Y G +
Sbjct: 216 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 275
Query: 382 EALNMFIEI-KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV-KTGYETGCFVGNA 439
EA+ +F + ++ +N F L C+ + G ++ +V K G++ G
Sbjct: 276 EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC 335
Query: 440 LLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 498
++ + + G + +A + + K D+V W T+++ H + A VF+ + + + P
Sbjct: 336 VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI--LQIDP 393
Query: 499 DEITMVGVLSACSHA 513
++ + VL A HA
Sbjct: 394 ND-SACYVLLANVHA 407
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 162/388 (41%), Gaps = 58/388 (14%)
Query: 61 ISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN 120
+S + + G SA+ V+ M +++ +S N +I+GY+R AR +FD+MP R L +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 121 VMLTGYVRNRRLGDARRLFDSM------PQK----------------------------- 145
M+ G ++ + LF M P +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 146 ----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF 201
D+V +++ Y +NG + V MP +N ++WN L+ NG E L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 202 D----SKSDWELISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQD 253
S I++ ++ + G +++ + V +++IS Y++
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-----NEISYNAM 308
G + A F + +D W++M+S Y +G DEA F+ M ++ NE+++ +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 309 VAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMP-QR 362
+ S D ELF+ M + + + ++ G+ G + QA + MP +
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEI 390
D V W ++S + E A +F EI
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISG----YLRNARFSLA 104
+L+ WN +I + +NG ++ L ++ M R + +++ ++S +R +
Sbjct: 156 NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH 215
Query: 105 RDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
+ + + +++ Y + LGDA + F +D V W++M+S Y +G D
Sbjct: 216 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 275
Query: 165 EAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFD---SKSDWE--LISWNC 214
EA E+F M + N +++ LL A H+G ++ LFD K ++ L + C
Sbjct: 276 EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC 335
Query: 215 LMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQ 265
++ + L A + M ++ D+V W T++S + A+ +F +
Sbjct: 336 VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 318/567 (56%), Gaps = 45/567 (7%)
Query: 250 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN-------- 301
YA G ++ A+N+FD+ H+DV TW M+ Y + G++DEA F++M N
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 302 -----------EISYN--------------------AMVAGYVQSNKMDMARELFEAMPS 330
+ YN A+V Y + MDMARE F M
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
RN+ M++GY + G + A+ +FD ++D V W +IS Y ++ + +EAL +F E+
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
G + + +S CA++ L+ K +H + G E+ + NAL+ MY KCG +
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
DVFE + ++VVSW++MI + HG AL +F MK V+P+E+T VGVL C
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
SH+GL++ G + F SM +Y++TP +HY CM+DL GRA L EA +++ +MP
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI 515
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
WG+L+ A RIHG ELG+ AA+ + ++EP + G VL+SN+YA RW D N+R M +
Sbjct: 516 WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEE 575
Query: 631 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 690
V K G S ++ K H+F +GD H + + IYA L+E+ K++ GYV VL D
Sbjct: 576 KNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVD 635
Query: 691 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRP------IRVIKNLRVCEDCHNAIKHISKI 744
VEEEEK+ ++ +HSEKLA+ FG++ IR++KNLRVCEDCH K +SK+
Sbjct: 636 VEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKV 695
Query: 745 VGRLIILRDSHRFHHFNEGICSCGDYW 771
R II+RD RFH + G+CSC DYW
Sbjct: 696 YEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 34/399 (8%)
Query: 126 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 185
Y R+ AR +FD M +DVV+WN M+ Y + G DEA ++F +M N + +L
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 186 AAYVH------NGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM 235
V N R A F D + D L++ L+ + + AR+ F KM
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT--ALVTMYAGAGCMDMAREFFRKM 273
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 295
VR++ M+SGY++ G + A+ +FDQ+ +D+ WT M+S YV++ EA F+
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 296 QMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNG 347
+M + + +S ++++ +D A+ + + + S N +I Y + G
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 348 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
+ R +F+ MP+R+ VSW+++I+ + G +AL++F +K++ N TF L
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 408 TCADIAALELGKQIHGQVVKTGYET------GCFVGNALLGMYFKCGSIGEANDVFEGIE 461
C+ +E GK+I + T GC V ++ + + EA +V E +
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV-----DLFGRANLLREALEVIESMP 508
Query: 462 -EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
+VV W ++++ H G+ L F + + + ++PD
Sbjct: 509 VASNVVIWGSLMSACRIH--GELELGKFAAKRILELEPD 545
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 189/396 (47%), Gaps = 64/396 (16%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVF------NTMP-------------RRSSVSYN---- 89
D++ WN +I + R G D A ++F N MP R ++ YN
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 90 ----------------AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
A+++ Y +AR+ F KM R+L M++GY + RL
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYV 189
DA+ +FD +KD+V W M+S Y ++ Y EA VF +M + +S +++A
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 190 HNGRIEEA-----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 244
+ G +++A C + + + EL N L+ + K L A R +F+KM R+VVSW+
Sbjct: 356 NLGILDKAKWVHSC-IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWS 414
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
+MI+ + G+ S A +LF + ++V T+ ++ G +G+++E + F M +
Sbjct: 415 SMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE 474
Query: 301 NEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIA---- 350
I+ Y MV + ++N + A E+ E+MP + NV W ++++ +G++
Sbjct: 475 YNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKF 534
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
A+++ ++ P D + + + YA+ +E+ N+
Sbjct: 535 AAKRILELEPDHDG-ALVLMSNIYAREQRWEDVRNI 569
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 352 ARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
A +F +P + + + + +++ + + I+ G L++ +F L +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
++AL G ++HG K FV + MY CG I A +VF+ + +DVV+WNT
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
MI Y R G +A +FE MK V PDE+ + ++SAC G + R Y +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM-RYNRAIYEFLIEN 241
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 579
V + T ++ + AG ++ A++ R M S + G S+
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/751 (31%), Positives = 400/751 (53%), Gaps = 42/751 (5%)
Query: 58 NKVISTHMR-NGHCDS---ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
+V+S M G C S A ++F+ MP+R +++N ++ LR+ + A +LF +M
Sbjct: 23 TRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQF 82
Query: 114 RDLVSWNVMLT----------GYVRNRRL-GDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+++ + G+ R++ G RL + +V N+++ Y++NG
Sbjct: 83 SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG---LESNVSMCNSLIVMYSRNGK 139
Query: 163 ADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS------KSDWELISWNCLM 216
+ +R+VF M +N SWN +L++Y G +++A L D K D +++WN L+
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD--IVTWNSLL 197
Query: 217 GGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNL----FDQSPH 268
G+ + + A + +M + + S ++++ A+ G + K +
Sbjct: 198 SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW 257
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM 328
DV+ T ++ Y++ G L AR FD M KN +++N++V+G + + A L M
Sbjct: 258 YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRM 317
Query: 329 PSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHY 380
+ +WN++ +GY G +A + M ++ + VSW AI SG ++ G++
Sbjct: 318 EKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNF 377
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
AL +FI+++ +G N +T S L ++ L GK++HG ++ +V AL
Sbjct: 378 RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Query: 441 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 500
+ MY K G + A ++F GI+ K + SWN M+ GYA G G++ + F M G++PD
Sbjct: 438 VDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDA 497
Query: 501 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 560
IT VLS C ++GL+ G +YF M Y + P+ +H +CM+DLLGR+G L+EA D ++
Sbjct: 498 ITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQ 557
Query: 561 NMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWAD 620
M +P A WGA L + +IH + EL E A + + +EPHNS Y+++ NLY+ RW D
Sbjct: 558 TMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWED 617
Query: 621 AGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGY 680
+R+ MR+ V+ +SW+++ +H F HP++ IY L +L +M++ GY
Sbjct: 618 VERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGY 677
Query: 681 VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKH 740
V T + D+ + EKE +L H+EKLA+ +G++ PIRV+KN +C D H K+
Sbjct: 678 VPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKY 737
Query: 741 ISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+S + R I+L++ R HHF +G CSC D W
Sbjct: 738 MSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 133/588 (22%), Positives = 256/588 (43%), Gaps = 92/588 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSY------------------------ 88
D L WN+++ ++R+G+ + A+ +F M + +Y
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 89 ---------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
N++I Y RN + L+R +F+ M R+L SWN +L+ Y + +
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVD 172
Query: 134 DARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNG 183
DA L D M + D+V+WN++LSGYA G + +A V +M P ++IS
Sbjct: 173 DAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS--S 230
Query: 184 LLAAYVHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
LL A G ++ + ++ +++ L+ ++K L AR +FD M ++
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 240 VVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 295
+V+WN+++SG + + A+ L + D TW ++ SGY G ++A
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 296 QMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNG 347
+M +K N +S+ A+ +G ++ A ++F M N ++ +T++ G
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Query: 348 DIAQARKLFDMMPQRDCVSWA----AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ +++ +++ + A A++ Y ++G + A+ +F IK + ++++
Sbjct: 411 LLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWN 466
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
C L A E G +++ G E ++L + G + E F+ + +
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Query: 464 -----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 518
+ + M+ R G+ +A ++ ++T+ +KPD LS+C I R
Sbjct: 527 YGIIPTIEHCSCMVDLLGRSGYLDEA---WDFIQTMSLKPDATIWGAFLSSCK----IHR 579
Query: 519 GTEYFYSMNKDYSVTP--SSKHYTCMIDL---LGRAGRLEEAQDLMRN 561
E K V +S +Y MI+L L R +E ++LMRN
Sbjct: 580 DLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRN 627
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 32/371 (8%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLA 104
+KD +L WN ++S++ + G+ D A+ + + M + V++N+++SGY A
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 105 RDLFDKM------PQRDLVSWNVMLTGYVRNRRLGDARR--LFDSMPQKDVVSWNAMLSG 156
+ +M P +S + + +LG A + + DV ++
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 157 YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELISW 212
Y + GY AR VF M KN ++WN L++ + +++A R+ + I+W
Sbjct: 270 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 329
Query: 213 NCLMGGFVK----RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
N L G+ K L K+ +K +VVSW + SG +++G+ A +F +
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 269 QDVFTWTAMVSGYVQN----GMLDEARTFFDQMPQKNEIS----YNAMVAGYVQSNKMDM 320
+ V A +S ++ +L + +KN I A+V Y +S +
Sbjct: 390 EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQS 449
Query: 321 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQ 376
A E+F + +++++SWN M+ GY G + F +M + D +++ +++S
Sbjct: 450 AIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Query: 377 TGHYEEALNMF 387
+G +E F
Sbjct: 510 SGLVQEGWKYF 520
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/745 (31%), Positives = 380/745 (51%), Gaps = 123/745 (16%)
Query: 83 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 142
R+ + N ++ ++ R AR +FDKMP+RD +WN M+ Y +RRL DA +LF S
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 143 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMP---------------------------- 174
P K+ +SWNA++SGY ++G EA +F++M
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 175 --HKNAISW---------NGLLAAYVHNGRIEEACRLFDS-KSDWELISWNCLMGGFVKR 222
H + I NGLLA Y RI EA LF++ + + ++W ++ G+ +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 223 KMLGAARKLFDKMHVR---------------------------------------DVVSW 243
A + F + ++
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN-- 301
+ +I YA+ +M A+ L + DV +W +M+ G V+ G++ EA + F +M +++
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 302 --EISYNAMVAGYVQS-NKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARK 354
+ + +++ + S +M +A + +++ N ++ Y + G + A K
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
+F+ M ++D +SW A+++G G Y+EAL +F ++ G + ++ + LS A++
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
LE G+Q+HG +K+G+ + V N+L+ MY KCGS+ +AN +F +E +D+++W +I G
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
YA++G L++ YF SM Y +TP
Sbjct: 506 YAKNG-----------------------------------LLEDAQRYFDSMRTVYGITP 530
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
+HY CMIDL GR+G + + L+ M EP A W A+L ASR HGN E GE+AA+ +
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 595 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 654
++EP+N+ YV LSN+Y+A+GR +A N+R M+ + K G SWVE + K+H F
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSE 650
Query: 655 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 714
D HP IY+ ++E+ L ++ GY + LHD+++E KE L YHSEKLAVAFG+L
Sbjct: 651 DRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLL 710
Query: 715 TIPAGRPIRVIKNLRVCEDCHNAIK 739
+P+G PIR+IKNLRVC DCH+A+K
Sbjct: 711 VVPSGAPIRIIKNLRVCGDCHSAMK 735
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 203/401 (50%), Gaps = 29/401 (7%)
Query: 203 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 262
S +D + N L+G K + AR++FDKM RD +WNTMI Y+ +S A+ L
Sbjct: 22 SYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKL 81
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAR 322
F +P ++ +W A++SGY ++G EA F +M Q + I N G V + M
Sbjct: 82 FRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSV----LRMCT 136
Query: 323 ELFEAMPSR-------------NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWA 368
L + +V+ N ++ Y Q I++A LF+ M +++ V+W
Sbjct: 137 SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
++++GY+Q G +A+ F +++R+G N+ TF L+ CA ++A +G Q+H +VK+
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 488
G++T +V +AL+ MY KC + A + EG+E DVVSWN+MI G R G +AL +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 489 ESMKTIGVKPDEITMVGVLS--ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
M +K D+ T+ +L+ A S + + + + Y+ + ++D+
Sbjct: 317 GRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN--ALVDMY 374
Query: 547 GRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
+ G ++ A + M E SW AL + GNT G
Sbjct: 375 AKRGIMDSALKVFEGM-IEKDVISWTAL-----VTGNTHNG 409
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 23/264 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF--------- 108
N ++ + + G DSAL+VF M + +S+ A+++G N + A LF
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 109 -DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
DK+ ++S + LT +++ + P V+ N++++ Y + G ++A
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQV-HGNYIKSGFPSSLSVN-NSLVTMYTKCGSLEDAN 485
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKR 222
+F M ++ I+W L+ Y NG +E+A R FDS I+ + C++ F +
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRS 545
Query: 223 KMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQ----AKNLFDQSPHQDVFTWTAM 277
+L +M V D W +++ + G++ AK L + P+ V + +
Sbjct: 546 GDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAV-PYVQL 604
Query: 278 VSGYVQNGMLDEARTFFDQMPQKN 301
+ Y G DEA M +N
Sbjct: 605 SNMYSAAGRQDEAANVRRLMKSRN 628
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/556 (37%), Positives = 332/556 (59%), Gaps = 12/556 (2%)
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQ 283
AR++ + + R+ W +I GYA +G +A ++ +++ FT++A++
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 284 NGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 339
L+ R F Q + + N M+ YV+ +D AR++F+ MP R+V SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
I Y + G++ A +LF+ +P +D V+W A+++G+AQ +EAL F +++ G +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETG--CFVGNALLGMYFKCGSIGEANDVF 457
T + +S CA + A + + K+GY +G+AL+ MY KCG++ EA +VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT-IGVKPDEITMVGVLSACSHAGLI 516
+ K+V ++++MI G A HG ++AL +F M T +KP+ +T VG L ACSH+GL+
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 517 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
D+G + F SM + + V P+ HYTCM+DLLGR GRL+EA +L++ M EP WGALLG
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 577 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
A RIH N E+ E AAE +F++EP G Y+LLSN+YA++G W +R +++ G++K
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 637 TGYSWVEVQN-KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEE 695
SWV +N ++HKF G+ HP ++I LEEL ++ GY V +DV +
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 696 KEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSH 755
K +L H+EKLA+AF +LT I ++KNLR+C DCH ++ S++ G++II+RD+
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 756 RFHHFNEGICSCGDYW 771
RFHHF G CSCGD+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 161/314 (51%), Gaps = 21/314 (6%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAY-- 188
ARR+ + + ++ W A++ GYA G DEA ++ M + + +++ LL A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 189 ---VHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
++ GR A + F + + N ++ +VK + + ARK+FD+M RDV+SW
Sbjct: 162 MKDLNLGRQFHA-QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 305
+I+ YA+ G+M A LF+ P +D+ WTAMV+G+ QN EA +FD+M + +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 306 NAMVAGYVQ-------SNKMDMARELFEA---MPSRNVSSWNTMITGYGQNGDIAQARKL 355
VAGY+ S D A ++ + PS +V + +I Y + G++ +A +
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAA 414
F M ++ +++++I G A G +EAL++F + E N TF AL C+
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 415 LELGKQIHGQVVKT 428
++ G+Q+ + +T
Sbjct: 401 VDQGRQVFDSMYQT 414
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 35/283 (12%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N MI Y++ AR +FD+MP+RD++SW ++ Y R + A LF+S+P KD+V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
+W AM++G+AQN EA E F +M K+ I + + A G I +L SK
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRM-EKSGIRADEVTVA----GYISACAQLGASK---- 298
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
+ R + A + + VV + +I Y++ G++ +A N+F +
Sbjct: 299 ----------YADRAVQIAQKSGYSPSD--HVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM-----VAGYVQSNKMDMARE 323
++VFT+++M+ G +G EA F M + EI N + + S +D R+
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 324 LFEAM-------PSRNVSSWNTMITGYGQNGDIAQARKLFDMM 359
+F++M P+R+ + M+ G+ G + +A +L M
Sbjct: 407 VFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTM 447
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 159/365 (43%), Gaps = 63/365 (17%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N +I +++ D A +VF+ MP R +S+ +I+ Y R A +LF+ +P +D+V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGY----AQNG---YADEAREVF 170
+W M+TG+ +N + +A FD M + + + ++GY AQ G YAD A ++
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 171 YQ---MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 227
+ P + + + L+ Y G +EEA +F S
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS------------------------ 343
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYV 282
M+ ++V ++++MI G A G +A +LF Q + T+ +
Sbjct: 344 -------MNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACS 396
Query: 283 QNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAM---PSRNVS 334
+G++D+ R FD M Q + Y MV ++ ++ A EL + M P V
Sbjct: 397 HSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV- 455
Query: 335 SWNTMITG--YGQNGDIAQ--ARKLFDMMPQRDCVSWAAIISG-YAQTGHYEEALNMFIE 389
W ++ N +IA+ A LF++ P D + ++S YA G + L +
Sbjct: 456 -WGALLGACRIHNNPEIAEIAAEHLFELEP--DIIGNYILLSNVYASAGDWGGVLRVRKL 512
Query: 390 IKRDG 394
IK G
Sbjct: 513 IKEKG 517
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 63/345 (18%)
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV--VSW----------- 150
AR + + + R+ W ++ GY + +A ++ M ++++ VS+
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 151 --------------------------NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 184
N M+ Y + D AR+VF +MP ++ ISW L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 185 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 244
+AAY G +E A LF+S ++++W ++ GF + A + FD+M + +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 245 TMISGYAQDGDMSQAKNLFDQ----------SPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
++GY A D+ SP V +A++ Y + G ++EA F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 295 DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM-----ITGYGQNGDI 349
M KN +Y++M+ G + A LF M ++ NT+ + +G +
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 350 AQARKLFDMM-------PQRDCVSWAAIISGYAQTGHYEEALNMF 387
Q R++FD M P RD + ++ +TG +EAL +
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELI 444
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 29/256 (11%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + D++ W ++I+ + R G+ + A +F ++P + V++ AM++G+ +NA+ A +
Sbjct: 209 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 268
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----------PQKDVVSWNAMLSGY 157
FD+M + + + V + GY+ A + D P VV +A++ Y
Sbjct: 269 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 328
Query: 158 AQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL-- 215
++ G +EA VF M +KN +++ ++ +GR +EA LF I N +
Sbjct: 329 SKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 388
Query: 216 MGGFVK---RKMLGAARKLFDKMH-------VRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
+G + ++ R++FD M+ RD + M+ + G + +A L
Sbjct: 389 VGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKT 446
Query: 266 ---SPHQDVFTWTAMV 278
PH V W A++
Sbjct: 447 MSVEPHGGV--WGALL 460
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 19/261 (7%)
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
F EI E L S S L C ++ + KQIHG V++ G + C++ L+ K
Sbjct: 38 FSEISNQKELLVSSLIS-KLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTK 93
Query: 447 CGSIGE--ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
G + A V E ++ ++ W +I GYA G +A+ ++ M+ + P T
Sbjct: 94 LGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFS 153
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT--CMIDLLGRAGRLEEAQDLMRNM 562
+L AC ++ G ++ + + + Y MID+ + ++ A+ + M
Sbjct: 154 ALLKACGTMKDLNLGRQFH---AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 563 PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAG 622
P E SW L+ A GN E AAE+ + + + + +A + + +A
Sbjct: 211 P-ERDVISWTELIAAYARVGNMEC---AAELFESLPTKDMVAWTAMVTGFAQNAKPQEAL 266
Query: 623 NMRSRMRDVGVQ----KVTGY 639
RM G++ V GY
Sbjct: 267 EYFDRMEKSGIRADEVTVAGY 287
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/479 (41%), Positives = 300/479 (62%), Gaps = 7/479 (1%)
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 359
K+ +++ Y + A+ +F+ S+++ +WN+++ Y + G I ARKLFD M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESL---NRSTFSCALSTCADIAA 414
P+R+ +SW+ +I+GY G Y+EAL++F +++ + E+ N T S LS C + A
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI-EEKDVVSWNTMIA 473
LE GK +H + K E +G AL+ MY KCGS+ A VF + +KDV +++ MI
Sbjct: 215 LEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMIC 274
Query: 474 GYARHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 532
A +G + +F M T + P+ +T VG+L AC H GLI+ G YF M +++ +
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
TPS +HY CM+DL GR+G ++EA+ + +MP EP WG+LL SR+ G+ + E A +
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 394
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFT 652
+ +++P NSG YVLLSN+YA +GRW + +R M G+ KV G S+VEV+ +H+F
Sbjct: 395 RLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFV 454
Query: 653 VGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 712
VGD E +RIYA L+E+ ++R GYV+ TK VL D+ E++KE L YHSEKLA+AF
Sbjct: 455 VGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFC 514
Query: 713 ILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
++ G P+R+IKNLR+C DCH +K ISK+ R I++RD +RFHHF +G CSC D+W
Sbjct: 515 LMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 40/303 (13%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 181
+L Y L A+R+FD KD+ +WN++++ YA+ G D+AR++F +MP +N ISW
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISW 162
Query: 182 NGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL------ 231
+ L+ YV G+ +EA LF K + + N F +L A +L
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN----EFTMSTVLSACGRLGALEQG 218
Query: 232 ------FDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQ 283
DK HV D+V +I YA+ G + +AK +F+ +DV ++AM+
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMV----------AGYVQSNK--MDMARELFEAMPSR 331
G+ DE F +M + I+ N++ G + K M E F PS
Sbjct: 279 YGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPS- 337
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHY---EEALNMF 387
+ + M+ YG++G I +A MP + D + W +++SG G E AL
Sbjct: 338 -IQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Query: 388 IEI 390
IE+
Sbjct: 397 IEL 399
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 151/353 (42%), Gaps = 59/353 (16%)
Query: 181 WNGLLAAYVHN-------GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
WN ++ A VHN I R+ + + + ++ L+ F L ++
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 234 KMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 289
++ + +D ++++ Y+ GD+ A+ +FD S +D+ W ++V+ Y + G++D+
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 290 ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM--PSRNVS------------- 334
AR FD+MP++N IS++ ++ GYV K A +LF M P N +
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 335 ------------SW-----------------NTMITGYGQNGDIAQARKLFDMM-PQRDC 364
W +I Y + G + +A+++F+ + ++D
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEI-KRDGESLNRSTFSCALSTCADIAALELGKQIHG 423
+++A+I A G +E +F E+ D + N TF L C + GK
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 424 QVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAG 474
+++ G ++ +Y + G I EA + E DV+ W ++++G
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 158/358 (44%), Gaps = 53/358 (14%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D +++ + G SA RVF+ + ++N++++ Y + AR LFD+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQKDVVSWN-----AMLSGYAQNG 161
MP+R+++SW+ ++ GYV + +A LF M P + V N +LS + G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 162 YADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK 221
++ + W + AY+ +E +++ L+ + K
Sbjct: 214 ALEQGK-------------W---VHAYIDKYHVE-----------IDIVLGTALIDMYAK 246
Query: 222 RKMLGAARKLFDKM-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD-----VFTWT 275
L A+++F+ + +DV +++ MI A G + LF + D T+
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP- 329
++ V G+++E +++F M ++ I+ Y MV Y +S + A +MP
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 330 SRNVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
+V W ++++G GDI ++L ++ P + ++ + + YA+TG + E
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM-NSGAYVLLSNVYAKTGRWMEV 423
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 133/313 (42%), Gaps = 61/313 (19%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
D DL WN V++ + + G D A ++F+ MP R+ +S++ +I+GY+ ++ A DL
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 108 FDKMP--------------------------------------------QRDLVSWNVML 123
F +M + D+V ++
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 124 TGYVRNRRLGDARRLFDSM-PQKDVVSWNAMLSGYAQNGYADEAREVFYQMP-----HKN 177
Y + L A+R+F+++ +KDV +++AM+ A G DE ++F +M + N
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 178 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARKLF 232
++++ G+L A VH G I E F + I+ + C++ + + ++ A
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 233 DKMHVR-DVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGML 287
M + DV+ W +++SG GD+ K L + P + + + + Y + G
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDP-MNSGAYVLLSNVYAKTGRW 420
Query: 288 DEARTFFDQMPQK 300
E + +M K
Sbjct: 421 MEVKCIRHEMEVK 433
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 37/238 (15%)
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
+++++ ++ S + TF L + + L LG++ H Q++ G + FV +LL M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 444 YFKCGS-------------------------------IGEANDVFEGIEEKDVVSWNTMI 472
Y CG I +A +F+ + E++V+SW+ +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 473 AGYARHGFGKQALMVFESMKTIG-----VKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 527
GY G K+AL +F M+ V+P+E TM VLSAC G +++G ++ ++
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYI 225
Query: 528 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
Y V T +ID+ + G LE A+ + + + ++ A++ ++G T+
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 312/528 (59%), Gaps = 10/528 (1%)
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMV 309
GDM A+ +FD+ +F W + GYV+N + E+ + +M + +E +Y +V
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 310 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCV 365
Q L + + T Y + G+++ A LF+ M +D V
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
+W A ++ QTG+ AL F ++ D + T LS C + +LE+G++I+ +
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 426 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
K + V NA L M+ KCG+ A +FE +++++VVSW+TMI GYA +G ++AL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM--NKDYSVTPSSKHYTCMI 543
+F +M+ G++P+ +T +GVLSACSHAGL++ G YF M + D ++ P +HY CM+
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
DLLGR+G LEEA + ++ MP EP WGALLGA +H + LG+K A+++ + P
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGS 416
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 663
+VLLSN+YAA+G+W +RS+MR +G +KV YS VE + KIH F GD HP+
Sbjct: 417 YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKA 476
Query: 664 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 723
IY L+E+ K+R+ GYV T V HDVE EEKE L +HSEKLA+AFG++ G PIR
Sbjct: 477 IYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIR 536
Query: 724 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
V+KNLR C+DCH K +S + II+RD +RFHHF G+CSC ++W
Sbjct: 537 VMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 167/366 (45%), Gaps = 33/366 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSL 103
++ P + WN + ++RN +L ++ M R +Y ++ + FS
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 104 ARDLFDKMPQRDLVSWNVMLTG----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
L + + ++ T Y++ L A LF+SM KD+V+WNA L+ Q
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 160 NGYADEAREVFYQMPHKNAISWNG-----LLAAYVHNGRIEEACRLFD----SKSDWELI 210
G + A E F +M +A+ ++ +L+A G +E ++D + D +I
Sbjct: 188 TGNSAIALEYFNKMC-ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQS 266
N + +K AAR LF++M R+VVSW+TMI GYA +GD +A LF ++
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-------YNAMVAGYVQSNKMD 319
+ T+ ++S G+++E + +F M Q N+ + Y MV +S ++
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 320 MARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDMMPQR--DCVSWAAIISG-YA 375
A E + MP + W ++ + D+ +K+ D++ + D S+ ++S YA
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYA 426
Query: 376 QTGHYE 381
G ++
Sbjct: 427 AAGKWD 432
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 170/380 (44%), Gaps = 38/380 (10%)
Query: 89 NAMISGYLRN----ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM-- 142
N++++ L N AR +FD+M + + WN + GYVRN+ ++ L+ M
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 143 --PQKDVVSWNAMLSGYAQ-----NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIE 195
+ D ++ ++ +Q G+A A V Y ++ L+ Y+ G +
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA-TELVMMYMKFGELS 161
Query: 196 EACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN-----TMISGY 250
A LF+S +L++WN + V+ A + F+KM D V ++ +M+S
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSAC 220
Query: 251 AQDGDMSQAKNLFDQSPHQD----VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN 306
Q G + + ++D++ ++ + A + +++ G + AR F++M Q+N +S++
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 307 AMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR 362
M+ GY + A LF M + N ++ +++ G + + ++ F +M Q
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 363 DCVS-------WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
+ + +A ++ ++G EEA IK+ + + L CA +
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEF---IKKMPVEPDTGIWGALLGACAVHRDM 397
Query: 416 ELGKQIHGQVVKTGYETGCF 435
LG+++ +V+T + G +
Sbjct: 398 ILGQKVADVLVETAPDIGSY 417
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 75/362 (20%)
Query: 182 NGLLAAYVHN----GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH- 236
N LL + N G + A ++FD + WN L G+V+ ++ + L+ KM
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 237 --VR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW---------TAMVSGYVQN 284
VR D ++ ++ +Q GD S L H V + T +V Y++
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFAL-----HAHVVKYGFGCLGIVATELVMMYMKF 157
Query: 285 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMI 340
G L A F+ M K+ +++NA +A VQ+ +A E F M + V + +M+
Sbjct: 158 GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSML 217
Query: 341 TGYGQNGDIA-------QARK----------------------------LFDMMPQRDCV 365
+ GQ G + +ARK LF+ M QR+ V
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV 277
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
SW+ +I GYA G EAL +F ++ +G N TF LS C+ + GK+ +
Sbjct: 278 SWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
Query: 426 VKTGYET--------GCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYA 476
V++ + C V LLG + G + EA + + + E D W ++ A
Sbjct: 338 VQSNDKNLEPRKEHYACMVD--LLG---RSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
Query: 477 RH 478
H
Sbjct: 393 VH 394
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
K+IH V++TG+ + LL G + A VF+ + + + WNT+ GY R+
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 479 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 538
++L++++ M+ +GV+PDE T V+ A S G G + K Y
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK-YGFGCLGIV 146
Query: 539 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
T ++ + + G L A+ L +M + A W A L GN+ +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLAVCVQTGNSAIA 194
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/727 (34%), Positives = 391/727 (53%), Gaps = 67/727 (9%)
Query: 100 RFSLARDLFDK-MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+F RDL K + +RDL + + YV+ S+ N ++ Y+
Sbjct: 7 KFKTFRDLLLKSVAERDLFTGKSLHALYVK------------SIVASSTYLSNHFVNLYS 54
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
+ G AR FY N S+N ++ AY + +I A +LFD + +S+N L+ G
Sbjct: 55 KCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG 114
Query: 219 FVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
+ + AA LF +M D + + +I+ D+ + + F S D ++
Sbjct: 115 YADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSS 174
Query: 275 T--AMVSGYVQNGMLDEARTFFDQMPQ-KNEISYNAMVAGYVQSNKMDMARELFEAMPSR 331
A V+ Y + G+L EA + F M + ++E+S+N+M+ Y Q + A L++ M +
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 332 N--------------VSSWNTMI-----------TGYGQNGDIAQ--------------- 351
++S + +I G+ QN +
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 352 --ARKLFDMMPQRDCVSWAAIISGYAQTGHY-EEALNMFIEIKRDGESLNRSTFSCALST 408
+ K+F + D V W +ISGY+ EEA+ F +++R G + +F C S
Sbjct: 295 YDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA 354
Query: 409 CADIAALELGKQIHGQVVKTGYETG-CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
C+++++ KQIHG +K+ + V NAL+ +Y+K G++ +A VF+ + E + VS
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 468 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 527
+N MI GYA+HG G +AL++++ M G+ P++IT V VLSAC+H G +D G EYF +M
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 528 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
+ + + P ++HY+CMIDLLGRAG+LEEA+ + MP++P + +W ALLGA R H N L
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 588 EKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNK 647
E+AA + M+P + YV+L+N+YA + +W + ++R MR ++K G SW+EV+ K
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 648 IHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTK--LVLHDVEEEEKEHM-LKYHS 704
H F D HP + +LEE+ KM++ GYV K +V D E E M L +HS
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHS 654
Query: 705 EKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGI 764
EKLAVAFG+++ G + V+KNLR+C DCHNAIK +S + GR II+RD+ RFH F +G
Sbjct: 655 EKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGK 714
Query: 765 CSCGDYW 771
CSCGDYW
Sbjct: 715 CSCGDYW 721
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 177/476 (37%), Gaps = 162/476 (34%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N ++ + + G A F + + SYN ++ Y ++++ +AR LFD++PQ D V
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSM--------------------PQKDVVSW------- 150
S+N +++GY R A LF M + D++
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVS 166
Query: 151 ----------NAMLSGYAQNGYADEAREVFYQMPH-KNAISWNGLLAAYVHNGRIEEACR 199
NA ++ Y++ G EA VFY M ++ +SWN ++ AY + +A
Sbjct: 167 GGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 200 LFDS------KSDW--------ELISWNCLMG-----------GFVKRKMLGA------- 227
L+ K D L S + L+G GF + +G+
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS 286
Query: 228 ----------ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ------------------- 258
+ K+F ++ D+V WNTMISGY+ + ++S+
Sbjct: 287 KCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Query: 259 --------AKNLFDQS--------------PHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
NL S P + A++S Y ++G L +AR FD+
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406
Query: 297 MPQKNEISYNAMVAGYVQ-----------------------------------SNKMDMA 321
MP+ N +S+N M+ GY Q K+D
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 322 RELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD-CVSWAAII 371
+E F M ++ MI G+ G + +A + D MP + V+WAA++
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 48 DVKDPDLLKWNKVISTHMRNGH-CDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS 102
++ PDL+ WN +IS + N + A++ F M R S+ + S + S
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 103 LARDLF-----DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGY 157
+ + +P + N +++ Y ++ L DAR +FD MP+ + VS+N M+ GY
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 158 AQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDS-----KSDWE 208
AQ+G+ EA ++ +M N I++ +L+A H G+++E F++ K + E
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRD-VVSWNTMISGYAQDGDMSQAK 260
++C++ + L A + D M + V+W ++ + +M+ A+
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/643 (34%), Positives = 344/643 (53%), Gaps = 39/643 (6%)
Query: 136 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIE 195
R + S +VS +++L D + +F +N N L+ N R E
Sbjct: 55 RGVLSSRVAAQLVSCSSLLKS------PDYSLSIFRNSEERNPFVLNALIRGLTENARFE 108
Query: 196 EACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
+ R F+ LG D++ V+ N+ + G+ G
Sbjct: 109 SSVR------------------HFILMLRLGVKP---DRLTFPFVLKSNSKL-GFRWLGR 146
Query: 256 MSQA---KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAM 308
A KN D D F ++V Y + G L A F++ P +++ + +N +
Sbjct: 147 ALHAATLKNFVDC----DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 309 VAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWA 368
+ GY ++ M MA LF +MP RN SW+T+I GY +G++ +A++LF++MP+++ VSW
Sbjct: 203 INGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT 262
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+I+G++QTG YE A++ + E+ G N T + LS C+ AL G +IHG ++
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 488
G + +G AL+ MY KCG + A VF + KD++SW MI G+A HG QA+ F
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 489 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 548
M G KPDE+ + VL+AC ++ +D G +F SM DY++ P+ KHY ++DLLGR
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 608
AG+L EA +L+ NMP P +W AL A + H E ++ + +++P G Y+ L
Sbjct: 443 AGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFL 502
Query: 609 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 668
+A+ G D R ++ ++ G+S++E+ +++KF+ GD H I L
Sbjct: 503 DKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKL 562
Query: 669 EELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNL 728
+E+ ++GY +HD+EEEEKE++ HSEKLA+ G L G IR+IKNL
Sbjct: 563 DEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNL 622
Query: 729 RVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
R+C DCH+ +K++SKI R I+LRD+ +FHHF +G CSCGDYW
Sbjct: 623 RICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 169/354 (47%), Gaps = 35/354 (9%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQRD 115
++ + + G A +VF P R S + +N +I+GY R +A LF MP+R+
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN 226
Query: 116 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 175
SW+ ++ GYV + L A++LF+ MP+K+VVSW +++G++Q G + A +++M
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 176 K----NAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGA 227
K N + +L+A +G + R + D+ + L+ + K L
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGY 281
A +F M+ +D++SW MI G+A G QA F Q P + VF A+++
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF--LAVLTAC 404
Query: 282 VQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVSS 335
+ + +D FFD M I Y +V ++ K++ A EL E MP + ++++
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 336 WNTMI------TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
W + GY + ++Q L ++ P+ C S+ + +A G+ ++
Sbjct: 465 WAALYRACKAHKGYRRAESVSQ--NLLELDPEL-CGSYIFLDKTHASKGNIQDV 515
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 192/443 (43%), Gaps = 53/443 (11%)
Query: 71 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------PQRDLVSWNVMLT 124
D +L +F R+ NA+I G NARF + F M P R + +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 125 GYVRNRRLGDARRLFDSMPQKDVVSWN-----AMLSGYAQNGYADEAREVFYQMPHK--- 176
+ R LG R + K+ V + +++ YA+ G A +VF + P +
Sbjct: 137 SKLGFRWLG---RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKK 193
Query: 177 -NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM 235
+ + WN L+ Y + A LF S + SW+ L+ G+V L A++LF+ M
Sbjct: 194 ESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAKN----LFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 291
++VVSW T+I+G++Q GD A + + ++ + +T A++S ++G L
Sbjct: 254 PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG- 312
Query: 292 TFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 351
+ GY+ N + + R + A ++ Y + G++
Sbjct: 313 ---------------IRIHGYILDNGIKLDRAIGTA-----------LVDMYAKCGELDC 346
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
A +F M +D +SW A+I G+A G + +A+ F ++ GE + F L+ C +
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALL--GMYFKCGSIGEANDVFEGIE-EKDVVSW 468
+ ++LG ++ Y + + +L + + G + EA+++ E + D+ +W
Sbjct: 407 SSEVDLGLNFFDS-MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTW 465
Query: 469 NTMIAGYARHGFGKQALMVFESM 491
+ H ++A V +++
Sbjct: 466 AALYRACKAHKGYRRAESVSQNL 488
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
W+ +I ++ +G + A ++F MP ++ VS+ +I+G+ + + A + +M ++ L
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGL 289
Query: 117 ----VSWNVMLTGYVRNRRLGDARR----LFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
+ +L+ ++ LG R + D+ + D A++ YA+ G D A
Sbjct: 290 KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAAT 349
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKM 224
VF M HK+ +SW ++ + +GR +A + F S + + + ++ +
Sbjct: 350 VFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 225 LGAARKLFDKMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQSP-HQDVFTWTAM 277
+ FD M + + + ++ + G +++A L + P + D+ TW A+
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 112/279 (40%), Gaps = 54/279 (19%)
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
S + S F + C D A+L + +H Q+++ G + + + C S+ ++ D
Sbjct: 26 SPDESHFISLIHACKDTASL---RHVHAQILRRG-----VLSSRVAAQLVSCSSLLKSPD 77
Query: 456 ----VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+F EE++ N +I G + + ++ F M +GVKPD +T VL + S
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 512 HAG---------------LIDRGTEYFYSMNKDYSVTPSSKH------------------ 538
G +D + S+ Y+ T KH
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 539 -YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE-KAAEMVFK 596
+ +I+ RA + A L R+MP E + SW L I G + GE A+ +F+
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMP-ERNSGSWSTL-----IKGYVDSGELNRAKQLFE 251
Query: 597 MEPH-NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
+ P N + L N ++ +G + A + M + G++
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/741 (33%), Positives = 387/741 (52%), Gaps = 67/741 (9%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM-----P 143
NA ++ ++R A +F KM +R+L SWNV++ GY + +A L+ M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 144 QKDVVSW-----------------------------------NAMLSGYAQNGYADEARE 168
+ DV ++ NA+++ Y + G AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELISWNCLMGGFVKRKM 224
+F +MP ++ ISWN +++ Y NG E LF + D +L++ ++ ++
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC---EL 309
Query: 225 LGAARKLFDKMHVR--------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
LG R+L +H D+ N++ Y G +A+ LF + +D+ +WT
Sbjct: 310 LGD-RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 277 MVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFE-AMPSR 331
M+SGY N + D+A + M Q +EI+ A+++ +D EL + A+ +R
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 332 NVS---SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 388
+S N +I Y + I +A +F +P+++ +SW +II+G EAL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 389 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
++K + N T + AL+ CA I AL GK+IH V++TG F+ NALL MY +CG
Sbjct: 489 QMKMTLQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 449 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
+ A F ++KDV SWN ++ GY+ G G + +F+ M V+PDEIT + +L
Sbjct: 548 RMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606
Query: 509 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 568
CS + ++ +G YF M +DY VTP+ KHY C++DLLGRAG L+EA ++ MP P
Sbjct: 607 GCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 665
Query: 569 ASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
A WGALL A RIH +LGE +A+ +F+++ + G Y+LL NLYA G+W + +R M
Sbjct: 666 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Query: 629 RDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVL 688
++ G+ G SWVEV+ K+H F D +HP+ I LE KM G ++
Sbjct: 726 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 785
Query: 689 HDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRL 748
D E ++ + HSE+ A+AFG++ G PI V KNL +CE+CH+ +K ISK V R
Sbjct: 786 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 845
Query: 749 IILRDSHRFHHFNEGICSCGD 769
I +RD+ FHHF +G CSCGD
Sbjct: 846 ISVRDAEHFHHFKDGECSCGD 866
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 180/377 (47%), Gaps = 29/377 (7%)
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC 198
SM V NA L+ + + G +A VF +M +N SWN L+ Y G +EA
Sbjct: 121 LSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM 180
Query: 199 RLFDSKSDW------ELISWNCLM---GGFVKRKMLGAARKLFDKMHV------RDVVSW 243
L+ + W ++ ++ C++ GG + AR +HV D+
Sbjct: 181 CLY-HRMLWVGGVKPDVYTFPCVLRTCGG-----IPDLARGKEVHVHVVRYGYELDIDVV 234
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQ 299
N +I+ Y + GD+ A+ LFD+ P +D+ +W AM+SGY +NGM E F M
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKL 355
+ ++ ++++ + R++ + + ++S N++ Y G +A KL
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKL 354
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
F M ++D VSW +ISGY ++A++ + + +D + T + LS CA + L
Sbjct: 355 FSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
+ G ++H +K + V N L+ MY KC I +A D+F I K+V+SW ++IAG
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL 474
Query: 476 ARHGFGKQALMVFESMK 492
+ +AL+ MK
Sbjct: 475 RLNNRCFEALIFLRQMK 491
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 13/306 (4%)
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE--------LFEAMPSR 331
G NG L+EA + M + + V+ + A+E +M S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
V N + + + G++ A +F M +R+ SW ++ GYA+ G+++EA+ ++ +
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 392 -RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
G + TF C L TC I L GK++H VV+ GYE V NAL+ MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
A +F+ + +D++SWN MI+GY +G + L +F +M+ + V PD +T+ V+SAC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 511 SHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
G G + + Y + ++V S + + L AG EA+ L M
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL--NAGSWREAEKLFSRME-RKDIV 364
Query: 570 SWGALL 575
SW ++
Sbjct: 365 SWTTMI 370
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 205/506 (40%), Gaps = 92/506 (18%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLF 108
D++ WN +IS + NG C L +F M S ++ ++IS L RD+
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 109 DKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
+ D+ N + Y+ +A +LF M +KD+VSW M+SGY N D
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 165 EAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 220
+A + + M + I+ +L+A G ++ L LIS+
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY-------- 432
Query: 221 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
V+ N +I+ Y++ + +A ++F P ++V +WT++++G
Sbjct: 433 -------------------VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 281 YVQNGMLDEARTFFDQMPQK--------------------------------------NE 302
N EA F QM ++
Sbjct: 474 LRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533
Query: 303 ISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 362
NA++ YV+ +M+ A F + ++V+SWN ++TGY + G + +LFD M +
Sbjct: 534 FLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKS 592
Query: 363 ----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
D +++ +++ G +++ + L F +++ G + N ++C + L+
Sbjct: 593 RVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQ-- 650
Query: 419 KQIHGQVVKTGYETGCFVGNALLG---MYFKCGSIGE--ANDVFEGIEEKDVVSWNTMIA 473
+ H + K V ALL ++ K +GE A +FE +++K V + +
Sbjct: 651 -EAHKFIQKMPVTPDPAVWGALLNACRIHHKI-DLGELSAQHIFE-LDKKSVGYYILLCN 707
Query: 474 GYARHGFGKQALMVFESMKTIGVKPD 499
YA G ++ V MK G+ D
Sbjct: 708 LYADCGKWREVAKVRRMMKENGLTVD 733
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 142/345 (41%), Gaps = 52/345 (15%)
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
+ G G EEA+ + ++ +++ F + C A E G +++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
G +GNA L M+ + G++ +A VF + E+++ SWN ++ GYA+ G+ +A+ ++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 491 MKTI-GVKPDEITMVGVLSACSHAGLIDRGTE-------YFYSMNKDYSVTPSSKHYTC- 541
M + GVKPD T VL C + RG E Y Y ++ D + + C
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 542 ----------------------MIDLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLG 576
MI G E +L MR + +P + +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 577 ASRIHGNTELGEKAAEMVFKMEPHNSGMYV------LLSNLYAASGRWADAGNMRSRM-- 628
A + G+ LG V +G V L+ +Y +G W +A + SRM
Sbjct: 306 ACELLGDRRLGRDIHAYVI-----TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 629 RDVG--VQKVTGYSWVEVQNK---IHKFTVGDCFHPEKDRIYAFL 668
+D+ ++GY + + +K ++ D P++ + A L
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/651 (35%), Positives = 363/651 (55%), Gaps = 39/651 (5%)
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 207
+S + ++ + G D AR+VF M ++ ++WN L+A + + R +EA ++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRL---- 155
Query: 208 ELISWNCLMGGFVKRKMLGAARKL-FDK-------------MHVRDVVSWNTMISGYAQD 253
+I+ N L + + A L +K + V +V + ++ Y +
Sbjct: 156 -MITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMV 309
G +AK + D+ +DV TA++ GY Q G EA F M Q NE +Y +++
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 310 AGY-----VQSNKMD---MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ 361
+ + K+ M + FE+ ++S +++T Y + + + ++F +
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESA----LASQTSLLTMYLRCSLVDDSLRVFKCIEY 330
Query: 362 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
+ VSW ++ISG Q G E AL F ++ RD N T S AL C+++A E G+QI
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 422 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 481
HG V K G++ + G+ L+ +Y KCG A VF+ + E DV+S NTMI YA++GFG
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 482 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 541
++AL +FE M +G++P+++T++ VL AC+++ L++ G E F S KD + ++ HY C
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYAC 509
Query: 542 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN 601
M+DLLGRAGRLEEA+ L + P W LL A ++H E+ E+ + ++EP +
Sbjct: 510 MVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGD 568
Query: 602 SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCF-HPE 660
G +L+SNLYA++G+W M+S+M+D+ ++K SWVE+ + H F GD F HP
Sbjct: 569 EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPN 628
Query: 661 KDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGR 720
++I LEEL K + GYV V D+EE KE L HSEKLA+AF + G
Sbjct: 629 SEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NVGG 687
Query: 721 PIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
IR++KNLRVC DCH+ IK +S+++ R II RDS RFHHF +G CSCGDYW
Sbjct: 688 SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 206/484 (42%), Gaps = 71/484 (14%)
Query: 84 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP 143
+ +S + ++ L+ AR +FD M +R +V+WN ++ +++RR +A ++ M
Sbjct: 98 AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI 157
Query: 144 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----------KNAISWNGLLAAYVHNGR 193
+V+ LS + ++D + E Q H N + L+ YV G+
Sbjct: 158 TNNVLPDEYTLSSVFK-AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 194 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISG 249
EA + D + +++ L+ G+ ++ A K F M V V ++ +++
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 250 YAQDGDMSQAK---NLFDQSPHQDVF-TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 305
D+ K L +S + + T++++ Y++ ++D++ F + N++S+
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 306 NAMVAGYVQSNKMDMARELFEAM------PS----------------------------- 330
++++G VQ+ + +MA F M P+
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 331 ----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
R+ + + +I YG+ G AR +FD + + D +S +I YAQ G EAL++
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQI-----HGQVVKTGYETGCFVGNALL 441
F + G N T L C + +E G ++ +++ T C V LL
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVD--LL 514
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP-DE 500
G + G + EA + + D+V W T+++ H + A + + K + ++P DE
Sbjct: 515 G---RAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERI--TRKILEIEPGDE 569
Query: 501 ITMV 504
T++
Sbjct: 570 GTLI 573
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 49/244 (20%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
L +++ ++R D +LRVF + + VS+ ++ISG ++N R +A F KM
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM-M 360
Query: 114 RDLVSWN--------------------------VMLTGYVRNRRLGD------------- 134
RD + N V G+ R++ G
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 135 -ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYV 189
AR +FD++ + DV+S N M+ YAQNG+ EA ++F +M N ++ +L A
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 190 HNGRIEEACRLFDS-KSDWELIS---WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
++ +EE C LFDS + D +++ + C++ + L A L ++ D+V W T
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRT 540
Query: 246 MISG 249
++S
Sbjct: 541 LLSA 544
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 138/298 (46%), Gaps = 25/298 (8%)
Query: 116 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 175
L S +LT Y+R + D+ R+F + + VSW +++SG QNG + A F +M
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 176 K----NAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGA 227
N+ + + L + EE ++ + D + + + L+ + K
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH-----QDVFTWTAMVSGYV 282
AR +FD + DV+S NTMI YAQ+G +A +LF++ + DV + +++
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN- 480
Query: 283 QNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN 337
+ +++E FD +K++I Y MV ++ +++ A L + + ++ W
Sbjct: 481 NSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539
Query: 338 TMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
T+++ + + A RK+ ++ P D + + + YA TG + + M ++K
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPG-DEGTLILMSNLYASTGKWNRVIEMKSKMK 596
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 254/788 (32%), Positives = 395/788 (50%), Gaps = 72/788 (9%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+PD+ K++S + + G A +VF++M R+ +++AMI Y R R+ LF
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 111 MPQRDLVSWNVMLTGYVRN-RRLGD--ARRLFDSMPQKDVVSW-----NAMLSGYAQNGY 162
M + ++ + + ++ GD A ++ S+ K +S N++L+ YA+ G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 163 ADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE----LISWNCLMGG 218
D A + F +M ++ I+WN +L AY NG+ EEA L L++WN L+GG
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 219 FVKRKMLGAARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPH 268
+ + AA L KM DV +W MISG +G QA ++F + P+
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 269 ---------------------------------QDVFTWTAMVSGYVQNGMLDEARTFFD 295
DV ++V Y + G L++AR FD
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 296 QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQ 351
+ K+ ++N+M+ GY Q+ A ELF M N + +WNTMI+GY +NGD +
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 352 ARKLFDMMP-----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 406
A LF M QR+ +W II+GY Q G +EAL +F +++ N T L
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 407 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 466
CA++ ++ ++IHG V++ + V NAL Y K G I + +F G+E KD++
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII 591
Query: 467 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM 526
+WN++I GY HG AL +F MKT G+ P+ T+ ++ A G +D G + FYS+
Sbjct: 592 TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI 651
Query: 527 NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTEL 586
DY + P+ +H + M+ L GRA RLEEA ++ M + W + L RIHG+ ++
Sbjct: 652 ANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDM 711
Query: 587 GEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 646
AAE +F +EP N+ ++S +YA + + RD ++K G SW+EV+N
Sbjct: 712 AIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRN 771
Query: 647 KIHKFTVGDCFHPEKDRIYAFLEELD-LKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSE 705
IH FT GD D +Y +E++ L R + Y +EEE +E HSE
Sbjct: 772 LIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELW-----IEEEGREETCGIHSE 826
Query: 706 KLAVAFGILTIPAGR--PIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 763
K A+AFG+++ IR++KNLR+C DCH+ K++SK G I+L D+ HHF G
Sbjct: 827 KFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNG 886
Query: 764 ICSCGDYW 771
CSC DYW
Sbjct: 887 DCSCKDYW 894
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 243/499 (48%), Gaps = 45/499 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLA 104
+++ D++ WN V+ + +NG + A+ + M + V++N +I GY + + A
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 105 RDLFDKMP----QRDLVSWNVMLTGYVRN----RRLGDARRLFDSMPQKDVVSWNAMLSG 156
DL KM D+ +W M++G + N + L R++F + + V+ + +S
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 157 YAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 211
+ ++ EV + + K + + N L+ Y G++E+A ++FDS + ++ +
Sbjct: 362 CSCLKVINQGSEV-HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 212 WNCLMGGFVKRKMLGAARKLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLF---- 263
WN ++ G+ + G A +LF +M ++R ++++WNTMISGY ++GD +A +LF
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Query: 264 -DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKM 318
D ++ TW +++GY+QNG DEA F +M N ++ +++
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGA 540
Query: 319 DMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
M RE+ + RN+ + N + Y ++GDI +R +F M +D ++W ++I GY
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGY 600
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
G Y AL +F ++K G + NR T S + + ++ GK++ + +
Sbjct: 601 VLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPA 660
Query: 435 FV-GNALLGMYFKCGSIGEANDVFEGIEEKDVVS----WNTMIAGYARHGFGKQALMVFE 489
+A++ +Y + + EA + I+E ++ S W + + G HG A+ E
Sbjct: 661 LEHCSAMVYLYGRANRLEEA---LQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717
Query: 490 SMKTIGVKPDEITMVGVLS 508
++ ++P+ ++S
Sbjct: 718 NL--FSLEPENTATESIVS 734
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 22/375 (5%)
Query: 283 QNGMLDEAR----TFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL---FEAMPSRNVSS 335
+NG L EA + F Q + +Y ++ + S + + R L F +V
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFV 117
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
+++ Y + G IA ARK+FD M +R+ +W+A+I Y++ + E +F + +DG
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
+ F L CA+ +E GK IH V+K G + V N++L +Y KCG + A
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
F + E+DV++WN+++ Y ++G ++A+ + + M+ G+ P +T ++ + G
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWG 572
D + M + + +T +T MI L G +A D+ R M P A +
Sbjct: 298 CDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 573 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN----LYAASGRWADAGNMRSRM 628
+ + A G + + KM + VL+ N +Y+ G+ DA + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDD---VLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 629 RDVGV----QKVTGY 639
++ V +TGY
Sbjct: 414 KNKDVYTWNSMITGY 428
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/688 (33%), Positives = 365/688 (53%), Gaps = 69/688 (10%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM- 173
+L++ N ++ Y + R A ++FDSMP+++VVSW+A++SG+ NG + +F +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 174 -----PHKNAISWN----GLLAAYVHNGRIEEACRLFDSKSDWELI--SWNCLMGGFVKR 222
P++ S N GLL A +I C K +E++ N L+ + K
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL----KIGFEMMVEVGNSLVDMYSKC 155
Query: 223 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPHQDVFTWTA 276
+ A K+F ++ R ++SWN MI+G+ G S+A + F + D FT T+
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 277 MVSGYVQNGMLDEARTFFD-------QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
++ GM+ + P I+ ++V YV+ + AR+ F+ +
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT-GSLVDLYVKCGYLFSARKAFDQIK 274
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
+ + SW+++I GY Q G+ + EA+ +F
Sbjct: 275 EKTMISWSSLILGYAQEGE-------------------------------FVEAMGLFKR 303
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK--TGYETGCFVGNALLGMYFKC 447
++ ++ S + AD A L GKQ+ VK +G ET V N+++ MY KC
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKC 361
Query: 448 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
G + EA F ++ KDV+SW +I GY +HG GK+++ +F M ++PDE+ + VL
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 567
SACSH+G+I G E F + + + + P +HY C++DLLGRAGRL+EA+ L+ MP +P
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481
Query: 568 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 627
W LL R+HG+ ELG++ +++ +++ N YV++SNLY +G W + GN R
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541
Query: 628 MRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE-GYVSSTKL 686
G++K G SWVE++ ++H F G+ HP I L+E + ++R E GYV K
Sbjct: 542 GNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKH 601
Query: 687 VLHDVEEEEKEHMLKYHSEKLAVAFGILT---IPAGRPIRVIKNLRVCEDCHNAIKHISK 743
LHD+++E KE L+ HSEKLA+ + T G+ IRV KNLRVC DCH IK +SK
Sbjct: 602 ELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSK 661
Query: 744 IVGRLIILRDSHRFHHFNEGICSCGDYW 771
I ++RD+ RFH F +G CSCGDYW
Sbjct: 662 ITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 183/398 (45%), Gaps = 68/398 (17%)
Query: 58 NKVISTHMRNGHCDS-----ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM- 111
N + S ++ + +C A +VF++MP R+ VS++A++SG++ N + LF +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 112 -----PQRDLVSWNVMLTG---------------------------------YVRNRRLG 133
P S N+ G Y + R+
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN------AISWNGLLAA 187
+A ++F + + ++SWNAM++G+ GY +A + F M N + LL A
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 188 YVHNGRIEEACRL--FDSKSDWELISWNCLMGG----FVKRKMLGAARKLFDKMHVRDVV 241
G I ++ F +S + S + G +VK L +ARK FD++ + ++
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEAR---TFF 294
SW+++I GYAQ+G+ +A LF + + D F ++++ + +L + +
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 295 DQMPQKNEIS-YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQAR 353
++P E S N++V Y++ +D A + F M ++V SW +ITGYG++G ++
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 354 KLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMF 387
++F M + D V + A++S + +G +E +F
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
R L C + G Q+H ++K+G N L+ MY KC A VF
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
+ + E++VVSW+ +++G+ +G K +L +F M G+ P+E T L AC ++
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 518 RGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
+G + + + + + + + ++D+ + GR+ EA+ + R + + SW A++
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI- 180
Query: 577 ASRIHGNTELGEKAAEMVFKMEPHN----SGMYVLLSNLYAASGRWADAGNMRSRMRDVG 632
A +H G KA + M+ N + L S L A S
Sbjct: 181 AGFVHAG--YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS---------------- 222
Query: 633 VQKVTGYSWVEVQNKIHKFTVGDCFH-PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDV 691
TG + Q IH F V FH P I L +L +K GY+ S + +
Sbjct: 223 ----TGMIYAGKQ--IHGFLVRSGFHCPSSATITGSLVDLYVKC---GYLFSARKAFDQI 273
Query: 692 EEE 694
+E+
Sbjct: 274 KEK 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/322 (18%), Positives = 142/322 (44%), Gaps = 45/322 (13%)
Query: 81 PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFD 140
P ++++ +++ Y++ AR FD++ ++ ++SW+ ++ GY + +A LF
Sbjct: 244 PSSATIT-GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 141 SM----PQKDVVSWNAMLSGYAQNGYADEARE---VFYQMPHKNAIS-WNGLLAAYVHNG 192
+ Q D + ++++ +A + ++ + ++P S N ++ Y+ G
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 193 RIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 252
++EA + F ++ISW ++ G+ K + + ++F +M ++
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI------------ 410
Query: 253 DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 307
D + A++S +GM+ E F ++ + + I Y
Sbjct: 411 ---------------EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 308 MVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-- 364
+V ++ ++ A+ L + MP + NV W T+++ +GDI +++ ++ + D
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Query: 365 -VSWAAIISGYAQTGHYEEALN 385
++ + + Y Q G++ E N
Sbjct: 516 PANYVMMSNLYGQAGYWNEQGN 537
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/581 (36%), Positives = 330/581 (56%), Gaps = 32/581 (5%)
Query: 215 LMGGFVK------RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----- 263
L+G FVK K L A ++ D+ + + N+MI + + ++ + +
Sbjct: 40 LVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILS 99
Query: 264 ---DQSPHQDVFTWTAMV----------SGYVQNGMLDEARTFFDQMPQKNEISYNAMVA 310
D P D +T +V +G +GM R FD P +++
Sbjct: 100 SGNDLKP--DNYTVNFLVQACTGLRMRETGLQVHGM--TIRRGFDNDPHVQ----TGLIS 151
Query: 311 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 370
Y + +D ++F ++P + M+T + GD+ ARKLF+ MP+RD ++W A+
Sbjct: 152 LYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAM 211
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
ISGYAQ G EALN+F ++ +G +N LS C + AL+ G+ H + +
Sbjct: 212 ISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKI 271
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
+ + L+ +Y KCG + +A +VF G+EEK+V +W++ + G A +GFG++ L +F
Sbjct: 272 KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSL 331
Query: 491 MKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 550
MK GV P+ +T V VL CS G +D G +F SM ++ + P +HY C++DL RAG
Sbjct: 332 MKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAG 391
Query: 551 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 610
RLE+A +++ MP +P AA W +LL ASR++ N ELG A++ + ++E N G YVLLSN
Sbjct: 392 RLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSN 451
Query: 611 LYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEE 670
+YA S W + ++R M+ GV+K G S +EV ++H+F VGD HP+ +I A ++
Sbjct: 452 IYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKD 511
Query: 671 LDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRV 730
+ ++R GY + T V+ D++EEEKE L HSEK A+AFGI+++ PIR++KNLRV
Sbjct: 512 ISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRV 571
Query: 731 CEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
C DCH ISKI R II+RD +RFHHF +G CSC +W
Sbjct: 572 CGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 41/297 (13%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
+IS Y +F+ +P D V M+T R + AR+LF+ MP++D +
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSK 204
+WNAM+SGYAQ G + EA VF+ M + N ++ +L+A G +++
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG------- 259
Query: 205 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 264
W +++R + +L T++ YA+ GDM +A +F
Sbjct: 260 ------RW---AHSYIERNKIKITVRL-----------ATTLVDLYAKCGDMEKAMEVFW 299
Query: 265 QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDM 320
++V+TW++ ++G NG ++ F M Q N +++ +++ G +D
Sbjct: 300 GMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDE 359
Query: 321 ARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD-CVSWAAII 371
+ F++M + + + ++ Y + G + A + MP + W++++
Sbjct: 360 GQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 41/295 (13%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
+IS + G DS +VFN++P V AM++ R AR LF+ MP+RD ++W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQMPH 175
N M++GY + +A +F M + V V+ ++LS Q G D+ R
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGR-------- 260
Query: 176 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM 235
W +Y+ +I+ RL + D + K + A ++F M
Sbjct: 261 -----WA---HSYIERNKIKITVRLATTLVDL-----------YAKCGDMEKAMEVFWGM 301
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEAR 291
++V +W++ ++G A +G + LF V T+ +++ G G +DE +
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 292 TFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMI 340
FD M + I Y +V Y ++ +++ A + + MP + + + W++++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 25/305 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM 111
PD + +++ R G A ++F MP R +++NAMISGY + A ++F M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 112 PQRDL-VSWNVMLTGYVRNRRLG--DARRLFDSMPQKDVVSWNAMLSG-----YAQNGYA 163
+ V+ M++ +LG D R S +++ + L+ YA+ G
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD-SKSDW---ELISWNCLMGGF 219
++A EVF+ M KN +W+ L NG E+ LF K D +++ ++ G
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGC 351
Query: 220 VKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQ---SPHQDV 271
+ ++ FD M + + ++ YA+ G + A ++ Q PH V
Sbjct: 352 SVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV 411
Query: 272 FTWTAMVSGYVQN---GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM 328
++ S +N G+L + ++ N +Y + Y SN D + ++M
Sbjct: 412 WSSLLHASRMYKNLELGVLASKKML--ELETANHGAYVLLSNIYADSNDWDNVSHVRQSM 469
Query: 329 PSRNV 333
S+ V
Sbjct: 470 KSKGV 474
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/542 (38%), Positives = 308/542 (56%), Gaps = 49/542 (9%)
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS--YNAMVAGYVQSNKMDMARELFEAMP 329
F TA++S Y + G++ +AR F++ PQ +++S YNA+++GY ++K+ A +F M
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 330 SRNVSS------------------W---------------------NTMITGYGQNGDIA 350
VS W N+ IT Y + G +
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
R+LFD MP + ++W A+ISGY+Q G + L ++ ++K G + T LS+CA
Sbjct: 209 AGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
+ A ++G ++ V G+ FV NA + MY +CG++ +A VF+ + K +VSW
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
MI Y HG G+ LM+F+ M G++PD V VLSACSH+GL D+G E F +M ++Y
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY 388
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
+ P +HY+C++DLLGRAGRL+EA + + +MP EP A WGALLGA +IH N ++ E A
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 591 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHK 650
V + EP+N G YVL+SN+Y+ S +R MR+ +K GYS+VE + ++H
Sbjct: 449 FAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHL 508
Query: 651 FTVGDCFHPEKDRIYAFLEELDLK-MRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAV 709
F GD H + + ++ L+EL+ M G + + EE + HSE+LA+
Sbjct: 509 FLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR-------GEEVSSTTREHSERLAI 561
Query: 710 AFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGD 769
AFGIL G I VIKNLRVCEDCH +K +SKIV R ++RD+ RFH+F +G+CSC D
Sbjct: 562 AFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKD 621
Query: 770 YW 771
YW
Sbjct: 622 YW 623
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 24/372 (6%)
Query: 151 NAMLSGYAQNGYADEAREVFYQMPHKNAIS--WNGLLAAYVHNGRIEEACRLFDSKSDWE 208
A++S Y + G +AR+VF + P + +S +N L++ Y N ++ +A +F +
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVR--------DVVSWNTMISGYAQDGDMSQAK 260
+ + M G V + L +H + +V N+ I+ Y + G + +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSN 316
LFD+ P + + TW A++SGY QNG+ + ++QM + + ++++
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 317 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
+ E+ + + S NV N I+ Y + G++A+AR +FD+MP + VSW A+I
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY-- 430
Y G E L +F ++ + G + + F LS C+ + G ++ + +K Y
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREYKL 390
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFE 489
E G + L+ + + G + EA + E + E D W ++ H A + F
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 450
Query: 490 SMKTIGVKPDEI 501
K I +P+ I
Sbjct: 451 --KVIEFEPNNI 460
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 58/328 (17%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRS--SVSYNAMISGYLRNARFSLARDLFDKMPQ---- 113
+IS + + G A +VF P+ S SV YNA+ISGY N++ + A +F +M +
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 114 -----------------------------------RDLVSWNVMLTGYVRNRRLGDARRL 138
++ N +T Y++ + RRL
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 194
FD MP K +++WNA++SGY+QNG A + E++ QM + + +L++ H G
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 195 E---EACRLFDSKSDW-ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 250
+ E +L +S + N + + + L AR +FD M V+ +VSW MI Y
Sbjct: 274 KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 251 AQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-- 304
G LFD + D + ++S +G+ D+ F M ++ ++
Sbjct: 334 GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPG 393
Query: 305 ---YNAMVAGYVQSNKMDMARELFEAMP 329
Y+ +V ++ ++D A E E+MP
Sbjct: 394 PEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
W + A + E+++++ + R G S + +F L +CA ++ G+Q+H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 427 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS--WNTMIAGYARHGFGKQA 484
K G ET FV AL+ MY KCG + +A VFE + +S +N +I+GY + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACS 511
+F MK GV D +TM+G++ C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT 167
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 18/255 (7%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 145
N+ I+ Y++ R LFD+MP + L++WN +++GY +N D L++ M
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 146 -DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRL 200
D + ++LS A G EV + N N ++ Y G + +A +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 201 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDM 256
FD L+SW ++G + M LFD M R D + ++S + G
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 257 SQAKNLFDQSPHQDVFT-----WTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVA 310
+ LF + ++ +V + G LDEA F + MP + + + A++
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 311 GYVQSNKMDMARELF 325
+DMA F
Sbjct: 435 ACKIHKNVDMAELAF 449
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 359/652 (55%), Gaps = 56/652 (8%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
W ++S + + G+ D A +F MP R+ V+ NAM++GY++ R + A LF +MP +++
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNV 138
Query: 117 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 176
VSW VMLT + R DA LFD MP+++VVSWN +++G +NG ++A++VF MP +
Sbjct: 139 VSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR 198
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 236
+ +SWN ++ Y+ N +EEA LF S+ +++W ++ G+ + + A +LF +M
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQ--------SPHQDVFTWTAMVSG-------- 280
R++VSW MISG+A + +A LF + SP+ + A G
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 281 ------------------------------YVQNGMLDEARTFFDQMPQKNEISYNAMVA 310
Y +G++ A++ ++ + S N ++
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIIN 376
Query: 311 GYVQSNKMDMARELFEAMPS-RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 369
Y+++ ++ A LFE + S + SW +MI GY + GD+++A LF + +D V+W
Sbjct: 377 RYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTV 436
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
+ISG Q + EA ++ ++ R G ST+S LS+ + L+ GK IH + KT
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTT 496
Query: 430 --YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 487
Y+ + N+L+ MY KCG+I +A ++F + +KD VSWN+MI G + HG +AL +
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNL 556
Query: 488 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
F+ M G KP+ +T +GVLSACSH+GLI RG E F +M + YS+ P HY MIDLLG
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE----LGEKAAEMVFKMEPHNSG 603
RAG+L+EA++ + +PF P +GALLG ++ + + E+AA + +++P N+
Sbjct: 617 RAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAP 676
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 655
+V L N+YA GR MR M GV+K G SWV V + + F GD
Sbjct: 677 GHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 262/537 (48%), Gaps = 75/537 (13%)
Query: 130 RRLGD-----ARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 180
RRL + AR L D +PQ+ VV W ++LS YA+ GY DEAR +F MP +N ++
Sbjct: 51 RRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVT 110
Query: 181 WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 240
N +L YV R+ EA LF ++SW ++ A +LFD+M R+V
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPERNV 169
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
VSWNT+++G ++GDM +AK +FD P +DV +W AM+ GY++N ++EA+ F M +K
Sbjct: 170 VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP 360
N +++ +MV GY + + A LF MP RN+ SW MI+G+
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGF----------------- 272
Query: 361 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-------GESLNRSTFSCALSTCADIA 413
+W + Y EAL +F+E+K+D GE+L ++C +
Sbjct: 273 -----AWNEL---------YREALMLFLEMKKDVDAVSPNGETLISLAYACG---GLGVE 315
Query: 414 ALELGKQIHGQVVKTGYET---GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
LG+Q+H QV+ G+ET + +L+ MY G I A + E D+ S N
Sbjct: 316 FRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNI 373
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
+I Y ++G ++A +FE +K++ D+++ ++ AG + R F ++
Sbjct: 374 IINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD 430
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTELG 587
VT +T MI L + EA L+ +M +P +++ LL ++ N + G
Sbjct: 431 GVT-----WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 588 EKAAEMVFKMEPHNSGMYVL---LSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 641
+ ++ K +L L ++YA G DA + ++M VQK T SW
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDT-VSW 537
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 262/540 (48%), Gaps = 42/540 (7%)
Query: 82 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD----LVSWNVMLTGYVRNRRLGDARR 137
RR + A+I L AR L DK+PQR +V W +L+ Y + L +AR
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARV 98
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 197
LF+ MP++++V+ NAML+GY + +EA +F +MP KN +SW +L A +GR E+A
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDA 157
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 257
LFD + ++SWN L+ G ++ + A+++FD M RDVVSWN MI GY ++ M
Sbjct: 158 VELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 258 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNK 317
+AK LF ++V TWT+MV GY + G + EA F +MP++N +S+ AM++G+ +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 318 MDMARELFEAMPSRNVSSWN----TMIT-GYGQNGDIAQARKLFDMM-PQRDCVSW---- 367
A LF M ++V + + T+I+ Y G + R+L + + Q W
Sbjct: 278 YREALMLFLEM-KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVD 336
Query: 368 ------AAIISGYAQTGHYEEA---LNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
+++ YA +G A LN +++ +NR + L + E
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETL--FERV 394
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
K +H +V T G Y + G + A +F+ + +KD V+W MI+G ++
Sbjct: 395 KSLHDKVSWTSMIDG----------YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 479 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV-TPSSK 537
+A + M G+KP T +LS+ +D+G + K + P
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
++ + + G +E+A ++ M + SW +++ HG L +KA + +M
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHG---LADKALNLFKEM 560
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 216/438 (49%), Gaps = 59/438 (13%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + +++ WN +++ +RNG + A +VF+ MP R VS+NAMI GY+ N A+ L
Sbjct: 163 EMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
F M ++++V+W M+ GY R + +A RLF MP++++VSW AM+SG+A N EA
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 168 EVFYQMPHK-NAISWNG------------------------------------------- 183
+F +M +A+S NG
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLA 342
Query: 184 --LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH-VRDV 240
L+ Y +G I A L + D L S N ++ ++K L A LF+++ + D
Sbjct: 343 KSLVHMYASSGLIASAQSLLNESFD--LQSCNIIINRYLKNGDLERAETLFERVKSLHDK 400
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
VSW +MI GY + GD+S+A LF + +D TWT M+SG VQN + EA + M +
Sbjct: 401 VSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC 460
Query: 301 N----EISYNAMVAGYVQSNKMDMARELF------EAMPSRNVSSWNTMITGYGQNGDIA 350
+Y+ +++ ++ +D + + A ++ N++++ Y + G I
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
A ++F M Q+D VSW ++I G + G ++ALN+F E+ G+ N TF LS C+
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Query: 411 DIAALELGKQIHGQVVKT 428
+ G ++ + +T
Sbjct: 581 HSGLITRGLELFKAMKET 598
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 321/546 (58%), Gaps = 27/546 (4%)
Query: 130 RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYV 189
R+ A R+F+ + + +V N+++ +AQN +A VF +M GL A
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQR------FGLFADNF 118
Query: 190 HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 249
+ +AC S W + +M +++ L + D+ N +I
Sbjct: 119 TYPFLLKAC----SGQSW--LPVVKMMHNHIEKLGLSS-----------DIYVPNALIDC 161
Query: 250 YAQDGDMS--QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 307
Y++ G + A LF++ +D +W +M+ G V+ G L +AR FD+MPQ++ IS+N
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 308 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP--QRDCV 365
M+ GY + +M A ELFE MP RN SW+TM+ GY + GD+ AR +FD MP ++ V
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
+W II+GYA+ G +EA + ++ G + + L+ C + L LG +IH +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 426 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
++ + +V NALL MY KCG++ +A DVF I +KD+VSWNTM+ G HG GK+A+
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 545
+F M+ G++PD++T + VL +C+HAGLID G +YFYSM K Y + P +HY C++DL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 546 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY 605
LGR GRL+EA +++ MP EP WGALLGA R+H ++ ++ + + K++P + G Y
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521
Query: 606 VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIY 665
LLSN+YAA+ W ++RS+M+ +GV+K +G S VE+++ IH+FTV D HP+ D+IY
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 666 AFLEEL 671
L L
Sbjct: 582 QMLGSL 587
Score = 155 bits (393), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 178/341 (52%), Gaps = 22/341 (6%)
Query: 53 DLLKWNKVISTHMRNGH--CDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D+ N +I + R G A+++F M R +VS+N+M+ G ++ AR LFD+
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVF 170
MPQRDL+SWN ML GY R R + A LF+ MP+++ VSW+ M+ GY++ G + AR +F
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 171 YQM--PHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKM 224
+M P KN ++W ++A Y G ++EA RL D S ++ + ++ + +
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 225 LGAARKLFDKMHVRDVVS----WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
L ++ + ++ S N ++ YA+ G++ +A ++F+ P +D+ +W M+ G
Sbjct: 331 LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG 390
Query: 281 YVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS-----R 331
+G EA F +M ++ +++++ A++ + +D + F +M
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 371
V + ++ G+ G + +A K+ MP + + V W A++
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 491
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 163/333 (48%), Gaps = 24/333 (7%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D + WN ++ ++ G A R+F+ MP+R +S+N M+ GY R S A +LF+KMP
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSM--PQKDVVSWNAMLSGYAQNGYADEAREVF 170
+R+ VSW+ M+ GY + + AR +FD M P K+VV+W +++GYA+ G EA +
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 171 YQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLMGGFVKR 222
QM +A + +LAA +G + R+ L S N L+ + K
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 223 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMV 278
L A +F+ + +D+VSWNTM+ G G +A LF + + D T+ A++
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Query: 279 SGYVQNGMLDEARTFF-------DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP-S 330
G++DE +F D +PQ Y +V + ++ A ++ + MP
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH--YGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD 363
NV W ++ + ++ A+++ D + + D
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+R F L A L KQ+H Q+++ + L+ C A VF
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
++E +V N++I +A++ QA VF M+ G+ D T +L ACS +
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL--EEAQDLMRNMPFEPPAASWGALL 575
+ ++ + ++ +ID R G L +A L M E SW ++L
Sbjct: 135 V-VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSML 192
Query: 576 G 576
G
Sbjct: 193 G 193
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 317/550 (57%), Gaps = 12/550 (2%)
Query: 234 KMHVRDVVSWNTMISGYAQ---DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 290
K H+ DV +I+ + + MS A++LF+ D+ + +M GY + E
Sbjct: 54 KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV 113
Query: 291 RTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITG 342
+ F ++ + + ++ +++ + ++ R+L + NV T+I
Sbjct: 114 FSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINM 173
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y + D+ AR +FD + + V + A+I+GYA+ EAL++F E++ N T
Sbjct: 174 YTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITL 233
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
LS+CA + +L+LGK IH K + V AL+ M+ KCGS+ +A +FE +
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY 293
Query: 463 KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 522
KD +W+ MI YA HG ++++++FE M++ V+PDEIT +G+L+ACSH G ++ G +Y
Sbjct: 294 KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKY 353
Query: 523 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 582
F M + + PS KHY M+DLL RAG LE+A + + +P P W LL A H
Sbjct: 354 FSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Query: 583 NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 642
N +L EK +E +F+++ + G YV+LSNLYA + +W ++R M+D KV G S +
Sbjct: 414 NLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSI 473
Query: 643 EVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLH-DVEEEEKEHMLK 701
EV N +H+F GD +++ L+E+ +++ GYV T +V+H ++ ++EKE L+
Sbjct: 474 EVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLR 533
Query: 702 YHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFN 761
YHSEKLA+ FG+L P G IRV+KNLRVC DCHNA K IS I GR ++LRD RFHHF
Sbjct: 534 YHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFE 593
Query: 762 EGICSCGDYW 771
+G CSCGD+W
Sbjct: 594 DGKCSCGDFW 603
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 164/358 (45%), Gaps = 39/358 (10%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
AR LF++M + D+V +N+M GY++ E +F + I +G+L +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVE------ILEDGILPDNYTFPSL 135
Query: 195 EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG 254
+AC + +K+ E +CL LG L D ++V T+I+ Y +
Sbjct: 136 LKACAV--AKALEEGRQLHCL------SMKLG----LDDNVYV-----CPTLINMYTECE 178
Query: 255 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVA 310
D+ A+ +FD+ V + AM++GY + +EA + F +M K NEI+ ++++
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 238
Query: 311 GYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVS 366
+D+ + + + + + +I + + G + A +F+ M +D +
Sbjct: 239 SCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA 298
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
W+A+I YA G E+++ MF ++ + + TF L+ C+ +E G++ Q+V
Sbjct: 299 WSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV 358
Query: 427 -KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHG 479
K G +++ + + G++ D +E I++ + + W ++A + H
Sbjct: 359 SKFGIVPSIKHYGSMVDLLSRAGNL---EDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 18/260 (6%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 177
++ Y + AR +FD + + VV +NAM++GYA+ +EA +F +M K N
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 178 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW----NCLMGGFVKRKMLGAARKLFD 233
I+ +L++ G ++ + + L+ F K L A +F+
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDE 289
KM +D +W+ MI YA G ++ +F+ ++ D T+ +++ G ++E
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEE 349
Query: 290 ARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGY 343
R +F QM K I Y +MV ++ ++ A E + +P S W ++
Sbjct: 350 GRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAAC 409
Query: 344 GQNGDIAQARKLFDMMPQRD 363
+ ++ A K+ + + + D
Sbjct: 410 SSHNNLDLAEKVSERIFELD 429
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 138/308 (44%), Gaps = 27/308 (8%)
Query: 102 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGY 157
S AR LF+ M + D+V +N M GY R + LF + + ++ ++ ++L
Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 158 AQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 212
A +E R++ + + K N L+ Y ++ A +FD + ++ +
Sbjct: 140 AVAKALEEGRQL-HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
N ++ G+ +R A LF +M + + ++ +++S A G + K + +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 269 QDVFTW----TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 324
+ TA++ + + G LD+A + F++M K+ +++AM+ Y K + + +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 325 FEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDCV-----SWAAIISGYA 375
FE M S NV ++ ++ G + + RK F M + + + +++ +
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 376 QTGHYEEA 383
+ G+ E+A
Sbjct: 379 RAGNLEDA 386
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 71 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNR 130
DSA VF+ + V YNAMI+GY R R + A LF +M + L + L + +
Sbjct: 181 DSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 131 RLGDARRLFDSMPQ--------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 182
L + L + + K V A++ +A+ G D+A +F +M +K+ +W+
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 183 GLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMH-- 236
++ AY ++G+ E++ +F+ + I++ L+ + RK F +M
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 237 ---VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-FTWTAMVSGYVQNGMLDEA 290
V + + +M+ ++ G++ A D+ P W +++ + LD A
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/767 (31%), Positives = 375/767 (48%), Gaps = 92/767 (11%)
Query: 93 SGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 152
SG + AR L RD + Q + + L G+ +R + DA +LFD M + D WN
Sbjct: 42 SGISKPARLVL-RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNV 100
Query: 153 MLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
M+ G+ G EA + + +M + ++ ++ + +EE ++
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 209 LIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 264
+S N L+ ++K A K+F++M RD+VSWN+MISGY GD + LF
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 265 Q------------------------SPHQ----------------DVFTWTAMVSGYVQN 284
+ SP DV T+++ Y +
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 285 GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN------VSSWN- 337
G + A F+ M Q+N +++N M+ Y ++ ++ A F+ M +N ++S N
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 338 -----------------------------TMITGYGQNGDIAQARKLFDMMPQRDCVSWA 368
+I YG+ G + A +FD M +++ +SW
Sbjct: 341 LPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+II+ Y Q G AL +F E+ + +T + L A+ +L G++IH +VK+
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 488
Y + + N+L+ MY CG + +A F I KDVVSWN++I YA HGFG+ ++ +F
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 489 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 548
M V P++ T +L+ACS +G++D G EYF SM ++Y + P +HY CM+DL+GR
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 608
G A+ + MPF P A WG+LL ASR H + + E AAE +FKME N+G YVLL
Sbjct: 581 TGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLL 640
Query: 609 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 668
N+YA +GRW D ++ M G+ + + S VE + K H FT GD H ++IY
Sbjct: 641 LNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY--- 697
Query: 669 EELDLKMRREG----YVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRV 724
E LD+ R G YV + + + + + + HS +LA FG+++ GR + V
Sbjct: 698 EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTV 757
Query: 725 IKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
N R+C CH ++ S++ R I++ DS FHHF+ G CSCG+YW
Sbjct: 758 RNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 32/385 (8%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM- 111
D+ N +IS +M+ G A +VF MP R VS+N+MISGYL + LF +M
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 112 -----PQRDLVSWNVMLTGYVRNRRLGD---ARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
P R + +V + ++G + + DV+ ++L Y++ G
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE------LISWNCLMG 217
A +F M +N ++WN ++ Y NGR+ +A F S+ + S N L
Sbjct: 284 SYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 218 GFV--KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
+ R + G A + + + +V +I Y + G + A+ +FD+ ++V +W
Sbjct: 344 SAILEGRTIHGYAMR---RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 276 AMVSGYVQNGMLDEARTFFDQM------PQKNEISYNAMVAGYVQSNKMDMARELFE-AM 328
++++ YVQNG A F ++ P I+ +++ Y +S + RE+ +
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA--SILPAYAESLSLSEGREIHAYIV 458
Query: 329 PSR---NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 385
SR N N+++ Y GD+ ARK F+ + +D VSW +II YA G ++
Sbjct: 459 KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVW 518
Query: 386 MFIEIKRDGESLNRSTFSCALSTCA 410
+F E+ + N+STF+ L+ C+
Sbjct: 519 LFSEMIASRVNPNKSTFASLLAACS 543
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 192/446 (43%), Gaps = 65/446 (14%)
Query: 46 KPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLAR 105
+ ++ D++ ++ + + G A R+FN M +R+ V++N MI Y RN R + A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 106 DLFDKMPQRD------LVSWNVMLTGYVRNRRL--GDA-RRLFDSMPQKDVVSWNAMLSG 156
F KM +++ + S N++ + R G A RR F +P +V A++
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF--LPH--MVLETALIDM 374
Query: 157 YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SW 212
Y + G A +F +M KN ISWN ++AAYV NG+ A LF D L+ +
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 213 NCLMGGFVKRKMLGAARK----LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
++ + + L R+ + + + + N+++ YA GD+ A+ F+
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL 324
+DV +W +++ Y +G + F +M N+ ++ +++A S +D E
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554
Query: 325 FEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
FE+M + + M+ G+ G+ + A++ + MP
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP------------------- 595
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
F+ R SL ++ + T A+ AA ++ K H TGC+V
Sbjct: 596 -------FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDN-------TGCYV--L 639
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDV 465
LL MY + G + N + +E K +
Sbjct: 640 LLNMYAEAGRWEDVNRIKLLMESKGI 665
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/474 (42%), Positives = 288/474 (60%), Gaps = 18/474 (3%)
Query: 307 AMVAGYVQSNKMDMAREL---FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD 363
+ VA Y + N+ +AR L F ++ S V + N +I + G+ A+K+ ++
Sbjct: 70 STVAAYRRCNRSYLARRLLLWFLSL-SPGVCNINLIIESLMKIGESGLAKKVLRNASDQN 128
Query: 364 CVSWAAIISGYAQTGHYEEAL----NM--FIEIKRDGESLNRSTFSCALSTCADIAALEL 417
++W +I GY + YEEAL NM F +IK N+ +F+ +L+ CA + L
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP-----NKFSFASSLAACARLGDLHH 183
Query: 418 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 477
K +H ++ +G E + +AL+ +Y KCG IG + +VF ++ DV WN MI G+A
Sbjct: 184 AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 478 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
HG +A+ VF M+ V PD IT +G+L+ CSH GL++ G EYF M++ +S+ P +
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
HY M+DLLGRAGR++EA +L+ +MP EP W +LL +SR + N ELGE A + + K
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA 363
Query: 598 EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCF 657
+ SG YVLLSN+Y+++ +W A +R M G++K G SW+E IH+F GD
Sbjct: 364 K---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTS 420
Query: 658 HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIP 717
H E IY LE L K + +G+VS T LVL DV EEEKE L YHSEKLA+A+ IL
Sbjct: 421 HIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSS 480
Query: 718 AGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
G IR+ KN+R+C DCHN IK +SK++ R+II+RD RFH F +G+CSC DYW
Sbjct: 481 PGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-------RT 292
V + N +I + G+ AK + + Q+V TW M+ GYV+N +EA +
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 293 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGD 348
F D P N+ S+ + +A + + A+ + M N + ++ Y + GD
Sbjct: 158 FTDIKP--NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 408
I +R++F + + D W A+I+G+A G EA+ +F E++ + S + TF L+T
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTT 275
Query: 409 CADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVV 466
C+ LE GK+ G + + + A++ + + G + EA ++ E + E DVV
Sbjct: 276 CSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV 335
Query: 467 SWNTMIA 473
W ++++
Sbjct: 336 IWRSLLS 342
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 23/274 (8%)
Query: 90 AMISGYLRNARFSLARDL---FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 146
+ ++ Y R R LAR L F + + + N+++ ++ G A+++ + ++
Sbjct: 70 STVAAYRRCNRSYLARRLLLWFLSLSP-GVCNINLIIESLMKIGESGLAKKVLRNASDQN 128
Query: 147 VVSWNAMLSGYAQNGYADEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEEA---- 197
V++WN M+ GY +N +EA + M N S+ LAA G + A
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVH 188
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 257
+ DS + I + L+ + K +G +R++F + DV WN MI+G+A G +
Sbjct: 189 SLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLAT 248
Query: 258 QAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAM 308
+A +F + + D T+ +++ G+L+E + +F M ++ I Y AM
Sbjct: 249 EAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAM 308
Query: 309 VAGYVQSNKMDMARELFEAMP-SRNVSSWNTMIT 341
V ++ ++ A EL E+MP +V W ++++
Sbjct: 309 VDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 50/247 (20%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNA------------ 99
P + N +I + M+ G A +V ++ +++N MI GY+RN
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 100 ---------RFSLARDLFDKMPQRDL--------------VSWNVMLTG-----YVRNRR 131
+FS A L DL + N +L+ Y +
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAA 187
+G +R +F S+ + DV WNAM++G+A +G A EA VF +M + ++I++ GLL
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTT 275
Query: 188 YVHNGRIEEACRLFDSKS-----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVV 241
H G +EE F S +L + ++ + + A +L + M + DVV
Sbjct: 276 CSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV 335
Query: 242 SWNTMIS 248
W +++S
Sbjct: 336 IWRSLLS 342
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 235/734 (32%), Positives = 361/734 (49%), Gaps = 115/734 (15%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
N+ L ++R+L +A M + V +S Y+ + RE+ ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVS-----VSSYSYQCLFEACREL-------RSL 99
Query: 180 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
S LL + G IE L NC++ + + + L A KLFD+M +
Sbjct: 100 SHGRLLHDRMRMG-IENPSVLLQ----------NCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFD------QSPHQDVFTW------------------- 274
VS TMIS YA+ G + +A LF P ++T
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 275 --------------TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 320
T +V+ YV+ G L A+ FDQM K ++ ++ GY Q+ +
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 321 ARELFEAMPSRNVSSWNT----------------------------------------MI 340
A +LF + + V W++ ++
Sbjct: 269 ALKLFVDLVTEGVE-WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 341 TGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK-RDGESLNR 399
Y + A + F + + + VSW+AIISGY Q +EEA+ F ++ ++ LN
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
T++ C+ +A +G Q+H +K + +AL+ MY KCG + +AN+VFE
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES 447
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
++ D+V+W I+G+A +G +AL +FE M + G+KP+ +T + VL+ACSHAGL+++G
Sbjct: 448 MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 520 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 579
+M + Y+V P+ HY CMID+ R+G L+EA M+NMPFEP A SW L
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 580 IHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 639
H N ELGE A E + +++P ++ YVL NLY +G+W +A M M + ++K
Sbjct: 568 THKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSC 627
Query: 640 SWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHM 699
SW++ + KIH+F VGD HP+ IY L+E D M EG + + E +E +
Sbjct: 628 SWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFM--EGDMFQCNMT------ERREQL 679
Query: 700 LKYHSEKLAVAFGILTI--PAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 757
L HSE+LA+AFG++++ A PI+V KNLR C DCH KH+S + G I++RDS RF
Sbjct: 680 LD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRF 738
Query: 758 HHFNEGICSCGDYW 771
HHF EG CSC DYW
Sbjct: 739 HHFKEGKCSCNDYW 752
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 187/477 (39%), Gaps = 104/477 (21%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
+++P +L N V+ + + A ++F+ M ++VS MIS Y A LF
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 109 -------DKMP----------------------------QRDLVSWNVMLTG----YVRN 129
DK P + L S + TG YV+
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC 232
Query: 130 RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYV 189
L A+R+FD M K V+ ++ GY Q G A +A ++F + + W+ + + V
Sbjct: 233 GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV-TEGVEWDSFVFSVV 291
Query: 190 HN----------GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
G+ AC + + E+ L+ ++K +A + F ++ +
Sbjct: 292 LKACASLEELNLGKQIHAC-VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-----FTWT------------------- 275
VSW+ +ISGY Q +A F ++ FT+T
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 276 ----------------AMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMD 319
A+++ Y + G LD+A F+ M + +++ A ++G+
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 320 MARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-----WAAI 370
A LFE M S N ++ ++T G + Q + D M ++ V+ + +
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
I YA++G +EAL + + +++ ++ C LS C LELG +I G+ ++
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAM---SWKCFLSGCWTHKNLELG-EIAGEELR 583
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS-----SVSYNAMISGYLRNARFS 102
++++P+ + W+ +IS + + + A++ F ++ ++ S +Y ++ A +
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 103 LARDLFDKMPQRDLVSW----NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+ + +R L+ + ++T Y + L DA +F+SM D+V+W A +SG+A
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHA 464
Query: 159 QNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDS-----KSDWEL 209
G A EA +F +M N++++ +L A H G +E+ D+ +
Sbjct: 465 YYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTI 524
Query: 210 ISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISG 249
++C++ + + +L A K M D +SW +SG
Sbjct: 525 DHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 277/437 (63%), Gaps = 5/437 (1%)
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
++T Y + GD+ AR++FD MP++ V+W +++SG+ Q G +EA+ +F +++ G +
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
+TF LS CA A+ LG +H ++ G + +G AL+ +Y +CG +G+A +VF+
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT-IGVKPDEITMVGVLSACSHAGLID 517
++E +V +W MI+ Y HG+G+QA+ +F M+ G P+ +T V VLSAC+HAGL++
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA---ASWGAL 574
G + M K Y + P +H+ CM+D+LGRAG L+EA + + A A W A+
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM 387
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
LGA ++H N +LG + A+ + +EP N G +V+LSN+YA SG+ + ++R M ++
Sbjct: 388 LGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLR 447
Query: 635 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEE 694
K GYS +EV+NK + F++GD H E IY +LE L + + GY ++ V+H VEEE
Sbjct: 448 KQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEE 507
Query: 695 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDS 754
EKE L+YHSEKLAVAFG+L I ++KNLR+CEDCH+A K+IS + R I +RD
Sbjct: 508 EKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDK 566
Query: 755 HRFHHFNEGICSCGDYW 771
RFHHF G CSC DYW
Sbjct: 567 LRFHHFQNGSCSCLDYW 583
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 155/319 (48%), Gaps = 18/319 (5%)
Query: 301 NEISYNAMV-AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 359
N +Y A+V AG + L R+ S +IT IA LF +
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
P D + ++I ++ + + + S + TF+ + +CAD++AL +GK
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127
Query: 420 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 479
+H V +G+ +V AL+ Y KCG + A VF+ + EK +V+WN++++G+ ++G
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187
Query: 480 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFYSMNKDYSVTPSS 536
+A+ VF M+ G +PD T V +LSAC+ G + G+ +Y S D +V
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV---- 243
Query: 537 KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 596
K T +I+L R G + +A+++ M E A+W A++ A HG G++A E+ K
Sbjct: 244 KLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELFNK 299
Query: 597 ME------PHNSGMYVLLS 609
ME P+N +LS
Sbjct: 300 MEDDCGPIPNNVTFVAVLS 318
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
D +++ Y++ GDM A+ +FD+ P + + W ++VSG+ QNG+ DEA F QM
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 299 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIA 350
+ + ++ ++++ Q+ + + + + + S NV +I Y + GD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-GESLNRSTFSCALSTC 409
+AR++FD M + + +W A+IS Y G+ ++A+ +F +++ D G N TF LS C
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 410 ADIAALELGKQIHGQVVKT 428
A +E G+ ++ ++ K+
Sbjct: 321 AHAGLVEEGRSVYKRMTKS 339
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----N 177
++T Y + + AR++FD MP+K +V+WN+++SG+ QNG ADEA +VFYQM +
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 178 AISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
+ ++ LL+A G + + D + L+ + + +G AR++FD
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLD 288
KM +V +W MIS Y G QA LF D P + T+ A++S G+++
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 289 EARTFFDQMPQ 299
E R+ + +M +
Sbjct: 328 EGRSVYKRMTK 338
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 34/240 (14%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF---- 201
D A+++ Y++ G + AR+VF +MP K+ ++WN L++ + NG +EA ++F
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 202 ------DSKSDWELISWNCL------MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISG 249
DS + L+S C +G +V + ++ L K+ +I+
Sbjct: 201 ESGFEPDSATFVSLLS-ACAQTGAVSLGSWVHQYIISEGLDLNVKL-------GTALINL 252
Query: 250 YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM-----PQKNEIS 304
Y++ GD+ +A+ +FD+ +V WTAM+S Y +G +A F++M P N ++
Sbjct: 253 YSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVT 312
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMM 359
+ A+++ + ++ R +++ M V M+ G+ G + +A K +
Sbjct: 313 FVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL 372
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS-----SVSYNAMISGYLRNARFSLAR 105
+ ++ WN ++S +NG D A++VF M R S S ++ +++S + SL
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 106 DLFDKMPQRDLVSWNV-----MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
+ + L NV ++ Y R +G AR +FD M + +V +W AM+S Y +
Sbjct: 229 WVHQYIISEGL-DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTH 287
Query: 161 GYADEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEE 196
GY +A E+F +M P N +++ +L+A H G +EE
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 311/538 (57%), Gaps = 12/538 (2%)
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFT---WTAMVSGYVQNGMLDEARTFFDQM----P 298
+I+ ++ + A+ +FD + T W AM GY +NG +A + M
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 299 QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARK 354
+ S + + V + + R + + R + +N ++ Y ++G ARK
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
+FD M +R+ V+W ++IS ++ E N+F +++ + + +T + L C+ +AA
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
L GK+IH Q++K+ + + N+L+ MY KCG + + VF+ + KD+ SWN M+
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
YA +G ++ + +FE M GV PD IT V +LS CS GL + G F M ++ V+P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
+ +HY C++D+LGRAG+++EA ++ MPF+P A+ WG+LL + R+HGN +GE AA+ +
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 595 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 654
F +EPHN G YV++SN+YA + W + +R M+ GV+K G SWV+V++KI F G
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 655 DCFH-PEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 713
+ D EL + + GY +T +VLHDV+EE K + + HSE+LA + +
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 652
Query: 714 LTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+ G PIR+ KNLRVC DCH+ +K +S++ R+I+LRD+ RFHHF +GICSC DYW
Sbjct: 653 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 157/371 (42%), Gaps = 81/371 (21%)
Query: 48 DVKDPDLLK---WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLA 104
DV D LL W + + RNG PR + + Y M+ ++ FS++
Sbjct: 192 DVTDSSLLTEKVWAAMAIGYSRNGS-----------PRDALIVYVDMLCSFIEPGNFSIS 240
Query: 105 RDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
L + +DL R R G ++ + D V +N +L Y ++G D
Sbjct: 241 VALKACVDLKDL-----------RVGR-GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI--SW---------- 212
+AR+VF M +N ++WN L++ R+ E LF K E+I SW
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLF-RKMQEEMIGFSWATLTTILPAC 347
Query: 213 ----------------------------NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWN 244
N LM + K + +R++FD M +D+ SWN
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 245 TMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
M++ YA +G++ + NLF + D T+ A++SG G+ + + F++M +
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 301 NEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIA---- 350
+S Y +V ++ K+ A ++ E MP + + S W +++ +G+++
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 351 QARKLFDMMPQ 361
A++LF + P
Sbjct: 528 AAKELFVLEPH 538
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/779 (31%), Positives = 402/779 (51%), Gaps = 65/779 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N +IST+++ G A+ VF ++ + VSY A+ISG+ R A +F +M + LV
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 118 SWN-----VMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNG--YADEA 166
N +LT VR R ++ + + V N+++S Y ++ D+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 167 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE-----LISWNCLMGGFVK 221
++F ++P ++ SWN ++++ V G+ +A LF + E + + L+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 222 RKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAM 277
+L R+L + ++++ N +I Y++ DM + ++L++ QD T+T M
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 278 VSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN 337
++ Y+ GM+D A F + +KN I+YNA++AG+ ++ A +LF M R V +
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 338 TMIT-------------------------GYGQNGDI--------------AQARKLFDM 358
+T G N I A A ++FD
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 359 MPQRDCVSWA--AIISGYAQTGHYEEALNMFIEIKRDGES-LNRSTFSCALSTCADIAAL 415
P S A +II GYA+ G ++A+++F + + L+ + + L+ C +
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
E+G QIH +K GY + +GN+L+ MY KC +A +F + E DV+SWN++I+ Y
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC--SHAGLIDRGTEYFYSMNKDYSVT 533
G +AL ++ M +KPD IT+ V+SA + + + + F SM Y +
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
P+++HYT + +LG G LEEA+D + +MP +P + ALL + RIH NT + ++ A++
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKL 717
Query: 594 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 653
+ +P Y+L SN+Y+ASG W + +R MR+ G +K SW+ +NKIH F
Sbjct: 718 ILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHA 777
Query: 654 GDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI 713
D HP++ IY LE L ++ + GY +T+ VL +V+E K+ L +HS KLAV +GI
Sbjct: 778 RDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGI 837
Query: 714 LTIPA-GRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
L+ G+P+RV+KN+ +C DCH K+IS +V R I+LRDS FHHF G CSC D W
Sbjct: 838 LSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 43/406 (10%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS-----SVSYNAMISGYLRNARFS 102
++ D+ WN V+S+ ++ G A +F M R S + + ++S ++
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 103 LARDLFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
R+L + + ++L N ++ Y + + L++ M +D V++ M++ Y
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--KSDWELISWNCLM 216
G D A E+F + KN I++N L+A + NG +A +LF + EL ++ +
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS--L 420
Query: 217 GGFVKRKMLGAARKLFDKMH---VRDVVSWNTMISGYAQD-----GDMSQAKNLFDQSPH 268
V L + +K+ +++H ++ ++N I D M+ A+ +FDQ P
Sbjct: 421 TSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS 480
Query: 269 Q--DVFTWTAMVSGYVQNGMLDEA-----RTFFDQMPQKNEISYNAMVAGYVQSNKMDMA 321
T+++ GY +NG+ D+A RT +Q +E+S ++A +M
Sbjct: 481 NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Query: 322 REL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
++ +A ++S N++I+ Y + D A K+F+ M + D +SW ++IS Y
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ 600
Query: 378 GHYEEALNMFI-----EIKRDGESLN------RSTFSCALSTCADI 412
+ +EAL ++ EIK D +L R T S LS+C D+
Sbjct: 601 RNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL 646
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
+E+ K +H +K E +GNAL+ Y K G EA VF + VVS+ +I+G
Sbjct: 96 VEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 475 YARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTE 521
++R +AL VF M+ G V+P+E T V +L+AC G +
Sbjct: 155 FSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/760 (29%), Positives = 373/760 (49%), Gaps = 108/760 (14%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALR------VFNTMPRRSSVSY------------- 88
D++ + WN +IS+ +RNG + AL F P S+
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 89 --------------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 128
+++I YL + + LFD++ Q+D V WNVML GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 129 NRRLGDARRLFDSMPQKDVVSWNA------------------------------------ 152
L + F M + D +S NA
Sbjct: 217 CGALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 153 ----MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
+LS Y++ G D+A ++F M + ++WN +++ YV +G +EE+ F +E
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF-----YE 330
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVR-------------DVVSWNTMISGYAQDGD 255
+IS L +L + K + + + D+ + +I Y +
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAG 311
+S A+N+F Q DV +TAM+SGY+ NG+ ++ F + + NEI+ +++
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 312 YVQSNKMDMARELFEAMPSRNVSSWNTM----ITGYGQNGDIAQARKLFDMMPQRDCVSW 367
+ + REL + + + + I Y + G + A ++F+ + +RD VSW
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
++I+ AQ+ + A+++F ++ G + + S ALS CA++ + GK IHG ++K
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 487
+ + + L+ MY KCG++ A +VF+ ++EK++VSWN++IA HG K +L +
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCL 630
Query: 488 FESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
F M + G++PD+IT + ++S+C H G +D G +F SM +DY + P +HY C++DL
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
Query: 547 GRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV 606
GRAGRL EA + +++MPF P A WG LLGA R+H N EL E A+ + ++P NSG YV
Sbjct: 691 GRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYV 750
Query: 607 LLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYA 666
L+SN +A + W +RS M++ VQK+ GYSW+E+ + H F GD HPE IY+
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYS 810
Query: 667 FLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 706
L L ++R EGY+ L LH E K + + EK
Sbjct: 811 LLNSLLGELRLEGYIPQPYLPLHP-ESSRKVYPVSRFIEK 849
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 138/272 (50%), Gaps = 10/272 (3%)
Query: 250 YAQDGDMSQAKNLFDQSP--HQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEI 303
YA G S +F + + W +++S +V+NG+L++A F+ +M +
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMM 359
++ +V V L + + S N +++I Y + G I KLFD +
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
Q+DCV W +++GYA+ G + + F ++ D S N TF C LS CA ++LG
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 420 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 479
Q+HG VV +G + + N+LL MY KCG +A+ +F + D V+WN MI+GY + G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 480 FGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+++L F M + GV PD IT +L + S
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 9/264 (3%)
Query: 343 YGQNGDIAQARKLFDMMPQR--DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRS 400
Y G + K+F + R W +IIS + + G +AL + ++ G S + S
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 460
TF C + C + + + V G + FV ++L+ Y + G I + +F+ +
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 461 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
+KD V WN M+ GYA+ G + F M+ + P+ +T VLS C+ LID G
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 580
+ + + V ++ + + GR ++A L R M +W + I
Sbjct: 260 Q-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCM-----I 312
Query: 581 HGNTELGEKAAEMVFKMEPHNSGM 604
G + G + F E +SG+
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGV 336
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 402 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
S L C++ L GKQ+H ++ + +LGMY CGS + +F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 462 EK--DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
+ + WN++I+ + R+G QAL + M GV PD T ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 269/440 (61%), Gaps = 5/440 (1%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
T++ Y + A K+FD +P+RD VSW + S Y + + L +F ++K D +
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDG 211
Query: 397 LNRS---TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
+ T AL CA++ AL+ GKQ+H + + G + N L+ MY +CGS+ +A
Sbjct: 212 CVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
VF G+ E++VVSW +I+G A +GFGK+A+ F M G+ P+E T+ G+LSACSH+
Sbjct: 272 YQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHS 331
Query: 514 GLIDRGTEYFYSMNK-DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWG 572
GL+ G +F M ++ + P+ HY C++DLLGRA L++A L+++M +P + W
Sbjct: 332 GLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWR 391
Query: 573 ALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 632
LLGA R+HG+ ELGE+ + +++ +G YVLL N Y+ G+W +RS M++
Sbjct: 392 TLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKR 451
Query: 633 VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVE 692
+ G S +E+Q +H+F V D HP K+ IY L E++ +++ GYV+ LH++E
Sbjct: 452 IHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLE 511
Query: 693 -EEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIIL 751
EEEK + L+YHSEKLA+AFGIL P G IRV KNLR C DCHN K +S + R++I+
Sbjct: 512 SEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIV 571
Query: 752 RDSHRFHHFNEGICSCGDYW 771
RD RFHHF G CSC D+W
Sbjct: 572 RDRSRFHHFKGGSCSCNDFW 591
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 9/267 (3%)
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
+I ++ + E +F ++R+ N + S AL C L G QIHG++
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 487
G+ + + L+ +Y C + +A VF+ I ++D VSWN + + Y R+ + L++
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 488 FESMKTI---GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
F+ MK VKPD +T + L AC++ G +D G + ++++ ++ + ++
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN-GLSGALNLSNTLVS 260
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG-NTELGEKAAEMV-FKMEPHNS 602
+ R G +++A + M E SW AL+ ++G E E EM+ F + P
Sbjct: 261 MYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 603 GMYVLLSNLYAASGRWADAGNMRSRMR 629
+ LLS + SG A+ RMR
Sbjct: 320 TLTGLLSAC-SHSGLVAEGMMFFDRMR 345
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 37/341 (10%)
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR------ 222
VF Q + N ++ A+ + E RLF S + N L F +
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 223 KMLGAAR---KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 279
+LG + K+F + D + T++ Y+ + + A +FD+ P +D +W + S
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 280 GYVQNGMLDEARTFFDQMPQKNEIS-------YNAMVAGYVQSN--KMDMARELFEAMPS 330
Y++N + FD+M KN++ ++A +N +D +++ + +
Sbjct: 188 CYLRNKRTRDVLVLFDKM--KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDE 245
Query: 331 RNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
+S NT+++ Y + G + +A ++F M +R+ VSW A+ISG A G +EA+
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET-------GCFVGNA 439
F E+ + G S T + LS C+ + G ++ ++ GC V
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD-- 363
Query: 440 LLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 479
LLG + + +A + + +E K D W T++ HG
Sbjct: 364 LLG---RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 162/372 (43%), Gaps = 38/372 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGY-----LRNARFSLAR 105
+P L N +I + R+F ++ R SS+ N + S + +++
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 106 DLFDKMPQRDLVSWNVMLTG----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG 161
+ K+ +S ++++T Y DA ++FD +P++D VSWN + S Y +N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 162 YADEAREVFYQMPH-------KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW-- 212
+ +F +M + + ++ L A + G ++ ++ D + L
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 213 --NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----- 265
N L+ + + + A ++F M R+VVSW +ISG A +G +A F++
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 266 -SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP------QKNEISYNAMVAGYVQSNKM 318
SP + T T ++S +G++ E FFD+M + N Y +V ++ +
Sbjct: 314 ISPEEQ--TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 319 DMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQ---RDCVSWAAIISGY 374
D A L ++M + S+ W T++ +GD+ ++ + + + + +++ Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 375 AQTGHYEEALNM 386
+ G +E+ +
Sbjct: 432 STVGKWEKVTEL 443
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 26/233 (11%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMP-------RRSSVSYNAMISGYLRNAR 100
++ D + WN + S ++RN L +F+ M + V+ +
Sbjct: 173 EIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGA 232
Query: 101 FSLARDLFDKMPQRDLVSW----NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSG 156
+ + D + + L N +++ Y R + A ++F M +++VVSW A++SG
Sbjct: 233 LDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISG 292
Query: 157 YAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE-- 208
A NG+ EA E F +M P + ++ GLL+A H+G + E FD E
Sbjct: 293 LAMNGFGKEAIEAFNEMLKFGISPEEQTLT--GLLSACSHSGLVAEGMMFFDRMRSGEFK 350
Query: 209 ----LISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDM 256
L + C++ + ++L A L M ++ D W T++ GD+
Sbjct: 351 IKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV 403
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 316/554 (57%), Gaps = 21/554 (3%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
D + N ++ Y + +++ A+ LFD+ +V +WT+++SGY G A + F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 299 Q-----KNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDI 349
+ NE ++ ++ + + + + + RN+ ++++ YG+ D+
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 350 AQARKLFDMMPQ--RDCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESLNRSTFSCA 405
AR++FD M R+ VSW ++I+ YAQ EA+ +F + N+ +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
+S C+ + L+ GK HG V + GYE+ V +LL MY KCGS+ A +F I V
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 525
+S+ +MI A+HG G+ A+ +F+ M + P+ +T++GVL ACSH+GL++ G EY
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 526 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF--EPPAASWGALLGASRIHGN 583
M + Y V P S+HYTC++D+LGR GR++EA +L + + E A WGALL A R+HG
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Query: 584 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
E+ +A++ + + + Y+ LSN YA SG W D+ ++R M+ G K SW+E
Sbjct: 423 VEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Query: 644 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGY------VSSTKLVLHDVEEEEKE 697
++ ++ F GD E I FL++L+ +M+ G+ ++++ V DV+EE K+
Sbjct: 483 NKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKD 542
Query: 698 HMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 757
M+ H E+LA+A+G+L +PAG IR++ NLR+C DCH A K IS+IV R I++RD +RF
Sbjct: 543 EMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRF 602
Query: 758 HHFNEGICSCGDYW 771
H F G C+C DYW
Sbjct: 603 HCFKNGSCTCRDYW 616
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 169/386 (43%), Gaps = 36/386 (9%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+P+++ W VIS + G +AL +F M V N + A +LA K
Sbjct: 92 EPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGK 151
Query: 111 MP---------QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKDVVSWNAMLSGYAQ 159
+R++V + ++ Y + + ARR+FDSM ++VVSW +M++ YAQ
Sbjct: 152 NIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 160 NGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIE--EACRLFDSKSDWE--L 209
N EA E+F N +++A GR++ + ++ +E
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 210 ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ---- 265
+ L+ + K L A K+F ++ V+S+ +MI A+ G A LFD+
Sbjct: 272 VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG 331
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDM 320
+ + T ++ +G+++E + M +K + Y +V + ++D
Sbjct: 332 RINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDE 391
Query: 321 AREL---FEAMPSRNVSSWNTMITG---YGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
A EL E + W +++ +G+ +++A K Q+ ++ A+ + Y
Sbjct: 392 AYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAY 451
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRS 400
A +G +E++ ++ +E+KR G R+
Sbjct: 452 AVSGGWEDSESLRLEMKRSGNVKERA 477
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 27/353 (7%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
D + N ++ YV+ + + AR+LFD M + +VVSW +++SGY G A +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 175 HKNAISWNGLLAAYVHNG-------RIEEA--CRLFDSKSDWELISWNCLMGGFVKRKML 225
+ N A V RI + RL S ++ + L+ + K +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 226 GAARKLFDKM--HVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAM 277
AR++FD M + R+VVSW +MI+ YAQ+ +A LF S + F ++
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 278 VSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
+S G L + + + N + +++ Y + + A ++F + +V
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALN-MFI 388
S+ +MI ++G A KLFD M + V+ ++ + +G E L + +
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 389 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
++ G + ++C + ++ ++ + ++ G E G + ALL
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYEL-AKTIEVGAEQGALLWGALL 414
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 373 GYAQTGHYEEALNMFI-EIKRDGESLNRSTFSC-ALSTCADIAALELGKQIHGQVVKTGY 430
G+ Q H A ++F+ + K D L F LS + A L +H +K G+
Sbjct: 4 GFIQNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNL---LHTLTLKLGF 60
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
+ F N L+ Y K I A +F+ + E +VVSW ++I+GY G + AL +F+
Sbjct: 61 ASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQK 120
Query: 491 M-KTIGVKPDEITMVGVLSACS-----------HAGLIDRGTEYFYSMNKDYSVTPSSKH 538
M + V P+E T V ACS HA L G + ++ V+ S
Sbjct: 121 MHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG------LRRNIVVSSS--- 171
Query: 539 YTCMIDLLGRAGRLEEAQDLMRNM-PFEPPAASWGALLGASRIHGNTELGEKAAEM 593
++D+ G+ +E A+ + +M + SW +++ A + G +A E+
Sbjct: 172 ---LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA---YAQNARGHEAIEL 221
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 310/579 (53%), Gaps = 53/579 (9%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSP--HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
N + YA G+M A+ LFD+ P +D WT ++S + + G+L + F +M +K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 302 -EISYNAMVA-----------GYVQSNK------------------MDM---------AR 322
EI ++V G+ Q MDM +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 323 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
+FE + ++V SW ++ + + + R++F MP+R+ V+W +++GY G E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 383 ALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG-------C 434
L + E + R G LN T LS CA L +G+ +H +K G
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
VG AL+ MY KCG+I + +VF + +++VV+WN + +G A HG G+ + +F M
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR- 345
Query: 495 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 554
VKPD++T VLSACSH+G++D G F+S+ + Y + P HY CM+DLLGRAG +EE
Sbjct: 346 EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEE 404
Query: 555 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAA 614
A+ LMR MP P G+LLG+ +HG E+ E+ + +M P N+ +L+SN+Y A
Sbjct: 405 AEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVA 464
Query: 615 SGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLK 674
GR A +R +R G++K+ G S + V + +H+F+ GD HP IY L E+ +
Sbjct: 465 EGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIER 524
Query: 675 MRREGYVSSTK-LVLH-DVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCE 732
+R GYV LV H + + EEKE L HSEKLAV FG+L P+ V KNLR+C
Sbjct: 525 IRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICR 584
Query: 733 DCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
DCH+A+K +SK+ R II+RD +RFH F G CSC DYW
Sbjct: 585 DCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
NA++ Y + S + +F+++ ++ +VSW V+L V+ L R +F MP+++ V
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDS 203
+W M++GY G+ E E+ +M + N ++ +L+A +G
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG----------- 258
Query: 204 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
N ++G +V L + ++ DV+ ++ YA+ G++ + N+F
Sbjct: 259 ---------NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ------KNEISYNAMVAGYVQSNK 317
++V TW A+ SG +G + R D PQ +++++ A+++ S
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHG---KGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGI 366
Query: 318 MDMARELFEAMP----SRNVSSWNTMITGYGQNGDIAQARKLFDMMP 360
+D F ++ V + M+ G+ G I +A L MP
Sbjct: 367 VDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 41/322 (12%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N ++ + + G R+F + +S VS+ ++ ++ R++F +MP+R+ V
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGYADEAREVFYQ 172
+W VM+ GY+ + L M + + V+ +MLS AQ+G
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG----------- 258
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLF 232
N ++ +VH +++ + + S +++ L+ + K + ++ +F
Sbjct: 259 ---------NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 233 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ---DVFTWTAMVSGYVQNGMLDE 289
M R+VV+WN + SG A G ++F Q + D T+TA++S +G++DE
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDE 369
Query: 290 ------ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITG 342
+ F+ P+ + Y MV ++ ++ A L MP N +++
Sbjct: 370 GWRCFHSLRFYGLEPKVDH--YACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 343 YGQNGDIAQA----RKLFDMMP 360
+G + A R+L M P
Sbjct: 428 CSVHGKVEIAERIKRELIQMSP 449
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 11/216 (5%)
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETG--CFVGNALLGMYFKCGSIGEANDVFEGI--E 461
L CA + L GK++H + +G + ++ NAL Y G + A +F+ I
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-T 520
EKD V W T+++ ++R+G ++ +F M+ V+ D++++V + C A L D G
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC--AKLEDLGFA 130
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 580
+ + + V S K ++D+ G+ G + E + + + E SW +L
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDTVV- 188
Query: 581 HGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 616
E E+ E+ +M N+ + ++ Y +G
Sbjct: 189 --KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 122/309 (39%), Gaps = 57/309 (18%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYL-----RNARFS 102
++++ ++ W V+ T ++ + VF+ MP R++V++ M++GYL R
Sbjct: 171 ELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLEL 230
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDAR-----------RLFDSMPQKDVVSWN 151
LA +F + V+ ML+ ++ L R + + DV+
Sbjct: 231 LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGT 290
Query: 152 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 211
A++ YA+ G D + VF M +N ++WN L + +G+ +F
Sbjct: 291 ALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFP--------- 341
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------ 265
+M+ + D +++ ++S + G + + F
Sbjct: 342 -----------QMIREVKP--------DDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGL 382
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMA--- 321
P D + MV + G+++EA +MP NE+ +++ K+++A
Sbjct: 383 EPKVD--HYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 322 -RELFEAMP 329
REL + P
Sbjct: 441 KRELIQMSP 449
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 306/540 (56%), Gaps = 31/540 (5%)
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE-----ISYNAM 308
GD+S A +F P W A++ G+ + A +++ M Q++ +A+
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 309 VAGY--------VQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLF 356
+ + S+ MD +L + R +S+ T++ Y +NGD+ A KLF
Sbjct: 111 TCSFTLKACARALCSSAMD---QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 357 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 416
D MP RD SW A+I+G EA+ ++ ++ +G + T AL C+
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS-----H 222
Query: 417 LGKQIHGQVVKTGYET-GCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAG 474
LG G+ + GY V NA + MY KCG + +A VFE +K VV+WNTMI G
Sbjct: 223 LGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
+A HG +AL +F+ ++ G+KPD+++ + L+AC HAGL++ G F +M V
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVER 341
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
+ KHY C++DLL RAGRL EA D++ +M P W +LLGAS I+ + E+ E A+ +
Sbjct: 342 NMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREI 401
Query: 595 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 654
+M +N G +VLLSN+YAA GRW D G +R M V+K+ G S++E + IH+F
Sbjct: 402 KEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNS 461
Query: 655 DCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 714
D H + IY ++E+ K+R +GYV+ T LVLHD+ EEEKE+ L YHSEKLAVA+G++
Sbjct: 462 DKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM 521
Query: 715 TIPAG---RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+ P+RVI NLR+C DCH KHISKI R II+RD RFH F +G CSC D+W
Sbjct: 522 MMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
D + +L Y +N L A +LFD MP +DV SWNA+++G A EA E++ +M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 175 ----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 230
++ ++ L A H G ++E +F S+ +I N + + K + A +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 231 LFDKMH-VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNG 285
+F++ + VV+WNTMI+G+A G+ +A +FD+ D ++ A ++ G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 286 MLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAM 328
+++ + F+ M ++N Y +V ++ ++ A ++ +M
Sbjct: 323 LVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D L ++ + +NG SA ++F+ MP R S+NA+I+G + R S A +L+ +M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 113 QRDLVSWNVMLTGYV-RNRRLGDARR---LFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
+ V + + LGD + +F +V+ NA + Y++ G+ D+A +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 169 VFYQMP-HKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 206
VF Q K+ ++WN ++ + +G A +FD D
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 310/541 (57%), Gaps = 14/541 (2%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK--- 300
N ++ + + G + A+ LFD+ P ++++++ +++SG+V G EA F M ++
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 301 -NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT-----MITGYGQNGDIAQARK 354
++ M+ + + ++L V NT +I Y + GDI AR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD-NTFVSCGLIDMYSKCGDIEDARC 280
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
F+ MP++ V+W +I+GYA G+ EEAL + +++ G S+++ T S + +A
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
LEL KQ H +++ G+E+ AL+ Y K G + A VF+ + K+++SWN ++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
YA HG G A+ +FE M V P+ +T + VLSAC+++GL ++G E F SM++ + + P
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
+ HY CMI+LLGR G L+EA +R P + W ALL A R+ N ELG AE +
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL 520
Query: 595 FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG 654
+ M P G YV++ N+Y + G+ A+A + + G+ + +WVEV ++ H F G
Sbjct: 521 YGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSG 580
Query: 655 DCF----HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 710
D F K +IY ++EL ++ GY + +L DV+E+E+E + +YHSEKLA+A
Sbjct: 581 DRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIA 640
Query: 711 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDY 770
+G++ P P+++ +N R+C++CH ++ IS + GR +++RD+ RFHHF EG CSCG Y
Sbjct: 641 YGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGY 700
Query: 771 W 771
W
Sbjct: 701 W 701
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 199/460 (43%), Gaps = 77/460 (16%)
Query: 73 ALRVFNTMPRRSSV-----SYNAMISGYLRNARFSLARDLFDKM------PQRDLVSWNV 121
A +F + R S +Y+A++ +R + ++ M P++ ++ N
Sbjct: 106 AFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM--NR 163
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-------- 173
+L +V+ + DARRLFD +P++++ S+ +++SG+ G EA E+F M
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE 223
Query: 174 PHKNAI---SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 230
H A+ + GL + YV G+ C L D +S L+ + K + AR
Sbjct: 224 THTFAVMLRASAGLGSIYV--GKQLHVCALKLGVVDNTFVSCG-LIDMYSKCGDIEDARC 280
Query: 231 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGM 286
F+ M + V+WN +I+GYA G +A L D D FT + M+ +
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 287 LDEARTFFDQMPQ---KNEISYN-AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITG 342
L+ + + + ++EI N A+V Y + ++D AR +F+ +P +N+ SWN ++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 343 YGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIE--------- 389
Y +G A KLF+ M + V++ A++S A +G E+ +F+
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 390 ------------------------IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
I+R + ++ L+ C LELG+ + ++
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL 520
Query: 426 VKTGYETGCFVGN--ALLGMYFKCGSIGEANDVFEGIEEK 463
G E +GN + MY G EA V E +E K
Sbjct: 521 YGMGPEK---LGNYVVMYNMYNSMGKTAEAAGVLETLESK 557
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 182/408 (44%), Gaps = 62/408 (15%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF-- 108
+P+ N+++ H++ G A R+F+ +P R+ SY ++ISG++ + A +LF
Sbjct: 155 EPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKM 214
Query: 109 --DKMPQRDLVSWNVMLTG-------------YVRNRRLG-------------------- 133
+++ + ++ VML +V +LG
Sbjct: 215 MWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGD 274
Query: 134 --DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAA 187
DAR F+ MP+K V+WN +++GYA +GY++EA + Y M + + + ++
Sbjct: 275 IEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 188 YVHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 243
++E L + + E+++ L+ + K + AR +FDK+ ++++SW
Sbjct: 335 STKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISW 394
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
N ++ GYA G + A LF++ +V T+ A++S +G+ ++ F M +
Sbjct: 395 NALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSE 454
Query: 300 KNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITG--YGQNGDIAQ 351
+ I Y M+ + +D A P + V+ W ++ +N ++ +
Sbjct: 455 VHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGR 514
Query: 352 --ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
A KL+ M P++ ++ + + Y G EA + ++ G S+
Sbjct: 515 VVAEKLYGMGPEK-LGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSM 561
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 5/233 (2%)
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESLNRSTFSCALSTCADI 412
L D + V+ + I + EA +F +EI R + ST+ + C +
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEI-RCSFKVGVSTYDALVEACIRL 136
Query: 413 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 472
++ K+++G ++ G+E ++ N +L M+ KCG I +A +F+ I E+++ S+ ++I
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 473 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 532
+G+ G +A +F+ M + T +L A + G I G + K V
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK-LGV 255
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
++ +ID+ + G +E+A+ MP E +W ++ +HG +E
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGYSE 307
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 353/660 (53%), Gaps = 57/660 (8%)
Query: 76 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 135
+ N+ + ++ N ++S Y + AR++FD MP+R+LVS+ ++TGY +N + +A
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 136 RRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAA 187
RL+ M Q+D+V ++ +++ A + +++ Q+ + I+ N L+A
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 188 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK-----------RKML----------- 225
YV ++ +A R+F +LISW+ ++ GF + ++ML
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 226 -GAARKLFDKMHVRD-----------------VVSWNTMISGYAQDGDMSQAKNLFDQSP 267
G++ K + D ++ ++ YA+ G ++ A+ +FDQ
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 323
D +W +++G NG DEA + F QM + IS +++ + + +
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 324 LFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLF-DMMPQRDCVSWAAIISGYAQTG 378
+ + +++ N+++T Y D+ LF D D VSW I++ Q
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 379 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 438
E L +F + + T L C +I++L+LG Q+H +KTG F+ N
Sbjct: 453 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 439 ALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 498
L+ MY KCGS+G+A +F+ ++ +DVVSW+T+I GYA+ GFG++AL++F+ MK+ G++P
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 499 DEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 558
+ +T VGVL+ACSH GL++ G + + +M ++ ++P+ +H +C++DLL RAGRL EA+
Sbjct: 573 NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERF 632
Query: 559 MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 618
+ M EP W LL A + GN L +KAAE + K++P NS +VLL +++A+SG W
Sbjct: 633 IDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNW 692
Query: 619 ADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 678
+A +RS M+ V+K+ G SW+E+++KIH F D FHPE+D IY L + +M E
Sbjct: 693 ENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 158/310 (50%), Gaps = 14/310 (4%)
Query: 278 VSGYVQNGMLDEARTFFDQMPQKNEI------SYNAMVAGYVQSNKMDMARELFEAMPSR 331
++ ++ EA FD QKN +Y +++ S + R++ + + +
Sbjct: 38 INSLCKSNFYREALEAFD-FAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNS 96
Query: 332 NVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 387
N N +++ YG+ G + AR++FD MP+R+ VS+ ++I+GY+Q G EA+ ++
Sbjct: 97 NCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
+++ ++ ++ F + CA + + LGKQ+H QV+K + NAL+ MY +
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 448 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV-KPDEITMVGV 506
+ +A+ VF GI KD++SW+++IAG+++ GF +AL + M + GV P+E
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
L ACS D G++ + + + ++ + D+ R G L A+ + + P
Sbjct: 277 LKACSSLLRPDYGSQ-IHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RP 334
Query: 567 PAASWGALLG 576
ASW ++
Sbjct: 335 DTASWNVIIA 344
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 190/490 (38%), Gaps = 100/490 (20%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGY---------LRNARFSLA 104
L+ N +I+ ++R A RVF +P + +S++++I+G+ L + + L+
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 105 RDLF--------------------DKMPQRDLVSWNVMLTG-----------YVRNRRLG 133
+F D Q + L G Y R L
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLN 322
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYV 189
ARR+FD + + D SWN +++G A NGYADEA VF QM +AIS LL A
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 190 HNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLF-DKMHVRDVVSWN 244
+ + ++ W +L N L+ + L LF D + D VSWN
Sbjct: 383 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 245 TMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTF----FDQ 296
T+++ Q + LF D T ++ G V+ L
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 297 MPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 356
+ N ++ Y + + AR +F++M +R+V SW+T+I GY
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGY------------- 549
Query: 357 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 416
AQ+G EEAL +F E+K G N TF L+ C+ + +E
Sbjct: 550 ------------------AQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 417 LGKQIHGQ------VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWN 469
G +++ + T C V + + G + EA + ++ E DVV W
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVV-----DLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 470 TMIAGYARHG 479
T+++ G
Sbjct: 647 TLLSACKTQG 656
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 18/246 (7%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARD 106
+ D + WN +++ +++ LR+F M ++ ++ G + + L
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494
Query: 107 LFDKMPQRDLVSWNVMLTG----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ + L + G Y + LG ARR+FDSM +DVVSW+ ++ GYAQ+G+
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGF 554
Query: 163 ADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WN 213
+EA +F +M N +++ G+L A H G +EE +L+ + IS +
Sbjct: 555 GEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
C++ + L A + D+M + DVV W T++S G++ A+ + D F
Sbjct: 615 CVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674
Query: 273 TWTAMV 278
TA V
Sbjct: 675 NSTAHV 680
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 159/367 (43%), Gaps = 34/367 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS------VSYNAMISGYLRNARFS 102
++ PD WN +I+ NG+ D A+ VF+ M RSS +S +++ + S
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAVSVFSQM--RSSGFIPDAISLRSLLCAQTKPMALS 388
Query: 103 LARDLFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLF-DSMPQKDVVSWNAMLSGY 157
+ + + DL N +LT Y L LF D D VSWN +L+
Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Query: 158 AQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWEL 209
Q+ E +F M + I+ LL V ++ C + E
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 210 ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ 269
N L+ + K LG AR++FD M RDVVSW+T+I GYAQ G +A LF +
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 270 DV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDM 320
+ T+ +++ G+++E + M ++ IS + +V ++ +++
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 321 ARELFEAMP-SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA---IISGYAQ 376
A + M +V W T+++ G++ A+K + + + D + A + S +A
Sbjct: 629 AERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHAS 688
Query: 377 TGHYEEA 383
+G++E A
Sbjct: 689 SGNWENA 695
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 339/629 (53%), Gaps = 57/629 (9%)
Query: 66 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG 125
R HC RV + + N++++ Y + + A +F + D S+N+M+ G
Sbjct: 61 RQIHC----RVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDG 116
Query: 126 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISW 181
YVR+RRL DA +LFD MP++ VS+ ++ GYAQN EA E+F +M + N ++
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 182 NGLLAAYVHNGRIEEACRLFDS-----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 236
+++A H G I + CR+ S K + + L+ + L ARKLFD+M
Sbjct: 177 ATVISACSHLGGIWD-CRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
R++V+WN M++GY++ G + QA+ LFDQ +D+ +W M+ G ++ LDEA ++ +
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 297 M------PQK----NEISYNAMVAG-----------------------------YVQSNK 317
M P + + +S +A G Y SN
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 318 MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
+ +A + FEA +++S N +I G+ +NG + QAR++FD +D SW A+ISGYAQ+
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 378 GHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
+ AL++F E+ + + T S + + +LE GK+ H + + +
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 437 GNALLGMYFKCGSIGEANDVF---EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
A++ MY KCGSI A ++F + I + WN +I G A HG K AL ++ +++
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 494 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 553
+ +KP+ IT VGVLSAC HAGL++ G YF SM D+ + P KHY CM+DLLG+AGRLE
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 595
Query: 554 EAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYA 613
EA+++++ MP + WG LL ASR HGN E+ E AA + ++P + G V+LSN+YA
Sbjct: 596 EAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYA 655
Query: 614 ASGRWADAGNMRSRMRDVGVQKVTGYSWV 642
+GRW D +R MR V+ +S V
Sbjct: 656 DAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 234/526 (44%), Gaps = 106/526 (20%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD--- 109
D +N ++ ++R+ AL++F+ MP RS VSY +I GY +N ++S A +LF
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 110 -------------------------------------KMPQRDLVSWNVMLTGYVRNRRL 132
K+ R VS N +L Y L
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN-LLHMYCLCLCL 224
Query: 133 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG 192
DAR+LFD MP++++V+WN ML+GY++ G ++A E+F Q+ K+ +SW ++ +
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKN 284
Query: 193 RIEEACRLFDSKSDWELISWNCLMGGFV--KRKMLGAAR--KLFDKMHVRDVVSWN---- 244
+++EA + + +M + + +G+++ +L + R ++
Sbjct: 285 QLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQA 344
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 304
T+I YA D+ A F+ S + + A+++G+V+NGM+++AR FDQ K+ S
Sbjct: 345 TIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFS 404
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSRN---------------VSSWNTMITG------- 342
+NAM++GY QS +A LF M S + +SS ++ G
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 343 ------------------YGQNGDIAQARKLFDM---MPQRDCVSWAAIISGYAQTGHYE 381
Y + G I A +F + W AII G A GH +
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT--GYET-----GC 434
AL+++ +++ N TF LS C +ELGK + + +K+ G E GC
Sbjct: 525 LALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKT-YFESMKSDHGIEPDIKHYGC 583
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 479
V LLG K G + EA ++ + + K DV+ W +++ HG
Sbjct: 584 MVD--LLG---KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 70/277 (25%)
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV-------- 456
AL +CA + G+QIH +V+K+G ++ ++ N++L MY KC + +A V
Sbjct: 47 ALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLD 106
Query: 457 -----------------------FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
F+ + E+ VS+ T+I GYA++ +A+ +F M+
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 494 IGVKPDEITMVGVLSACSHAG---------------------LIDRGTEYFYSM------ 526
+G+ +E+T+ V+SACSH G + + Y +
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 527 -NKDYSVTPSSKHYT--CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
K + P T M++ +AG +E+A++L + E SWG + I G
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTM-----IDGC 280
Query: 584 TELGEKAAEMVFKMEPHNSGMY---VLLSNLYAASGR 617
+ +V+ E GM V++ +L +AS R
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 24/229 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSL------- 103
D D+ WN +IS + ++ AL +F M S V +A+ + +A SL
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK 458
Query: 104 -ARDL--FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF---DSMPQKDVVSWNAMLSGY 157
A D F +P D ++ ++ Y + + A +F ++ + WNA++ G
Sbjct: 459 RAHDYLNFSTIPPNDNLT-AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS 517
Query: 158 AQNGYADEAREVF---YQMPHK-NAISWNGLLAAYVHNGRIEEACRLFDS-KSDW----E 208
A +G+A A +++ +P K N+I++ G+L+A H G +E F+S KSD +
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDM 256
+ + C++ K L A+++ KM V+ DV+ W ++S G++
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNV 626
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 226/733 (30%), Positives = 374/733 (51%), Gaps = 100/733 (13%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV-----SYNAMISGYLRNARFS 102
++ PD++ WN +IS H + G A+ F M R+SSV + +++S A
Sbjct: 286 EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 103 LARDLFDKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
L + + + L S + +++ Y + ++ A ++F+++ +K+ V WNAM+ GYA
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELI 210
NG + + E+F M + ++ LL+ + +E + + K L
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----- 265
N L+ + K L AR++F++M RD V+WNT+I Y QD + S+A +LF +
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 266 ----------------------------------SPHQDVFTWTAMVSGYVQNGMLDEAR 291
+D+ T ++++ Y + G++ +AR
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 292 TFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV------------------ 333
F +P+ + +S NA++AGY Q+N ++ A LF+ M +R V
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 334 -----SSWNTMIT--GYGQNGD---------------IAQARKLF-DMMPQRDCVSWAAI 370
+ ++ IT G+ G+ + +A LF ++ + V W +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
+SG++Q G YEEAL + E++ DG +++TF L C+ +++L G+ IH + +
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFE 489
+ N L+ MY KCG + ++ VF+ + + +VVSWN++I GYA++G+ + AL +F+
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
SM+ + PDEIT +GVL+ACSHAG + G + F M Y + H CM+DLLGR
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 550 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 609
G L+EA D + +P A W +LLGA RIHG+ GE +AE + ++EP NS YVLLS
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943
Query: 610 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 669
N+YA+ G W A +R MRD GV+KV GYSW++V+ + H F GD H E +I FLE
Sbjct: 944 NIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLE 1003
Query: 670 ELDLKMRREGYVS 682
+L M+ + V+
Sbjct: 1004 DLYDLMKDDAVVN 1016
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 264/546 (48%), Gaps = 47/546 (8%)
Query: 75 RVFNTMPRRSSVSY----------------------NAMISGYLRNARFSLARDLFDKMP 112
+VF+ MP+R +++ NA++ Y + A+ S A FD +
Sbjct: 63 KVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL- 121
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQNGYADEARE 168
++D+ +WN ML+ Y + G R F S+ + + +++ +LS A+ + R+
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 169 VFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 224
+ M +N+ L+ Y RI +A R+F+ D + W CL G+VK +
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 225 LGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
A +F++M H D +++ T+I+ Y + G + A+ LF + DV W M+SG
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 281 YVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSN-----KMDMA----RELFEAMPSR 331
+ + G A +F M +K+ + G V S +D+ E + +
Sbjct: 302 HGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
N+ +++++ Y + + A K+F+ + +++ V W A+I GYA G + + +F+++K
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
G +++ TF+ LSTCA LE+G Q H ++K FVGNAL+ MY KCG++
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+A +FE + ++D V+WNT+I Y + +A +F+ M G+ D + L AC+
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
H + +G + + ++ + + +ID+ + G +++A+ + ++P E S
Sbjct: 541 HVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSM 598
Query: 572 GALLGA 577
AL+
Sbjct: 599 NALIAG 604
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 159/667 (23%), Positives = 282/667 (42%), Gaps = 141/667 (21%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P+ ++ V+ST R + + ++ +M + R+S A++ Y + R S AR +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 108 FDKMPQRDLVSWNVMLTGYV-----------------------------------RNRRL 132
F+ + + V W + +GYV R +L
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 133 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG 192
DAR LF M DVV+WN M+SG+ + G A E F+ M + S L + +
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 193 RI-----------EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 241
I EA +L + + + + L+ + K + + AA K+F+ + ++ V
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASN---IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 242 SWNTMISGYAQDGDMSQAKNLF-------------------------------------- 263
WN MI GYA +G+ + LF
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 264 -DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAR 322
+ +++F A+V Y + G L++AR F++M ++ +++N ++ YVQ A
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
Query: 323 ELFEAMP---------------------------------------SRNVSSWNTMITGY 343
+LF+ M R++ + +++I Y
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ G I ARK+F +P+ VS A+I+GY+Q + EEA+ +F E+ G + + TF+
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFA 633
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYET-GCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
+ C +L LG Q HGQ+ K G+ + G ++G +LLGMY + EA +F +
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 463 -KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT- 520
K +V W M++G++++GF ++AL ++ M+ GV PD+ T V VL CS + G
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 521 --EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 578
+ + D S+ +ID+ + G ++ + + M SW +L+
Sbjct: 754 IHSLIFHLAHDLDELTSNT----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 579 RIHGNTE 585
+G E
Sbjct: 810 AKNGYAE 816
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 221/481 (45%), Gaps = 68/481 (14%)
Query: 131 RLGDARRLFDSMPQKDVVSW----------------------NAMLSGYAQNGYADEARE 168
+L +R++FD MPQ+ ++ NA++ YA+ A +
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKM 224
F K+ +WN +L+ Y G+ + R LF+++ +++ ++ +
Sbjct: 117 QF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETN 175
Query: 225 LGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
+ R++ M R+ ++ YA+ +S A+ +F+ + WT + SG
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 281 YVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW 336
YV+ G+ +EA F++M + + +++ ++ Y++ K+ AR LF M S +V +W
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
N MI+G+G+ G C + A+ F +++
Sbjct: 296 NVMISGHGKRG----------------CETV---------------AIEYFFNMRKSSVK 324
Query: 397 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 456
RST LS +A L+LG +H + +K G + +VG++L+ MY KC + A V
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 516
FE +EEK+ V WN MI GYA +G + + +F MK+ G D+ T +LS C+ + +
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 517 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
+ G++ F+S+ + + ++D+ + G LE+A+ + M + +W ++G
Sbjct: 445 EMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC-DRDNVTWNTIIG 502
Query: 577 A 577
+
Sbjct: 503 S 503
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
AL +GK +H + + G ++ +GNA++ +Y KC + A F+ + EKDV +WN+M++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
Y+ G + L F S+ + P++ T VLS C+ ++ G + SM K +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
+S ++D+ + R+ +A+ + + +P W L G L E+A +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAG---LPEEAVLV 248
Query: 594 VFKM--EPHNSG--MYVLLSNLYAASGRWADA 621
+M E H +V + N Y G+ DA
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 357 bits (916), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 321/596 (53%), Gaps = 24/596 (4%)
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
++ V W L G+V A +LF +P+ DVV WN M+ G+++ E ++
Sbjct: 70 KKLFVFWCSRLGGHVSY-----AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEA----------CRLFDSKSDWELISWNCLMGGFVKR 222
M K ++ + ++ NG + C + L N L+ +
Sbjct: 125 M-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLC 183
Query: 223 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMV 278
++ AR +FD+ DV SWN MISGY + + ++ L + V T ++
Sbjct: 184 GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 279 SGYVQNGMLDEARTFFDQMPQ-KNEISY---NAMVAGYVQSNKMDMARELFEAMPSRNVS 334
S + D + + + + K E S NA+V Y +MD+A +F +M +R+V
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
SW +++ GY + G++ AR FD MP RD +SW +I GY + G + E+L +F E++ G
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ T L+ CA + +LE+G+ I + K + VGNAL+ MYFKCG +A
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
VF ++++D +W M+ G A +G G++A+ VF M+ + ++PD+IT +GVLSAC+H+G
Sbjct: 424 KVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
++D+ ++F M D+ + PS HY CM+D+LGRAG ++EA +++R MP P + WGAL
Sbjct: 484 MVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
LGASR+H + + E AA+ + ++EP N +Y LL N+YA RW D +R ++ DV ++
Sbjct: 544 LGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
Query: 635 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 690
K G+S +EV H+F GD H + + IY LEEL + Y+ T +L +
Sbjct: 604 KTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 20/325 (6%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV- 147
NA++ Y +AR +FD+ + D+ SWN+M++GY R + ++ L M + V
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 148 ---VSWNAMLSGYAQNGYADEAREVF-YQMPHKNAISW---NGLLAAYVHNGRIEEACRL 200
V+ +LS ++ D + V Y K S N L+ AY G ++ A R+
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 201 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 260
F S ++ISW ++ G+V+R L AR FD+M VRD +SW MI GY + G +++
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 261 NLFDQSPH----QDVFTWTAMVSGYVQNGMLDEA---RTFFDQMPQKNEISY-NAMVAGY 312
+F + D FT ++++ G L+ +T+ D+ KN++ NA++ Y
Sbjct: 354 EIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413
Query: 313 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF----DMMPQRDCVSWA 368
+ + A+++F M R+ +W M+ G NG +A K+F DM Q D +++
Sbjct: 414 FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYL 473
Query: 369 AIISGYAQTGHYEEALNMFIEIKRD 393
++S +G ++A F +++ D
Sbjct: 474 GVLSACNHSGMVDQARKFFAKMRSD 498
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 210/500 (42%), Gaps = 101/500 (20%)
Query: 102 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGY 157
S A LF K+P+ D+V WN M+ G+ + G+ RL+ +M ++ V ++ +L+G
Sbjct: 85 SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 158 AQNGYADEAREVFYQMPHK-----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 212
++G A + + K N N L+ Y G ++ A +FD + ++ SW
Sbjct: 145 KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSW 204
Query: 213 NCLMGGFVKRK--------------------------MLGAARKLFDKMHVRDVVSW--- 243
N ++ G+ + K +L A K+ DK + V +
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 244 ----------NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 293
N +++ YA G+M A +F +DV +WT++V GYV+ G L ART+
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 294 FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR---------------------- 331
FDQMP ++ IS+ M+ GY+++ + + E+F M S
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 332 NVSSW-----------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
+ W N +I Y + G +A+K+F M QRD +W A++ G
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ------VVKT 428
A G +EA+ +F +++ + T+ LS C ++ ++ + + +
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMV 487
GC V +LG + G + EA ++ + + + W ++ H + +
Sbjct: 505 LVHYGCMVD--MLG---RAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH--NDEPMAE 557
Query: 488 FESMKTIGVKPDEITMVGVL 507
+ K + ++PD + +L
Sbjct: 558 LAAKKILELEPDNGAVYALL 577
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 159/377 (42%), Gaps = 69/377 (18%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N ++ + G D A VF+ + S+N MISGY R + + +L +M +R+LV
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLV 232
Query: 118 S----------------------------------------WNVMLTGYVRNRRLGDARR 137
S N ++ Y + A R
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 197
+F SM +DV+SW +++ GY + G AR F QMP ++ ISW ++ Y+ G E+
Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNES 352
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL------------FDKMHVR-DVVSWN 244
+F E+ S + F +L A L DK ++ DVV N
Sbjct: 353 LEIFR-----EMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QK 300
+I Y + G +A+ +F +D FTWTAMV G NG EA F QM Q
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQARKL 355
++I+Y +++ S +D AR+ F M S ++ + M+ G+ G + +A ++
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 356 FDMMPQR-DCVSWAAII 371
MP + + W A++
Sbjct: 528 LRKMPMNPNSIVWGALL 544
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+P L N +++ + G D A+R+F +M R +S+ +++ GY+ LAR FD+
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--------------------------- 143
MP RD +SW +M+ GY+R ++ +F M
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 144 ------------QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
+ DVV NA++ Y + G +++A++VF+ M ++ +W ++ +N
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 192 GRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHV-----RDVVS 242
G+ +EA ++F D + I++ ++ M+ ARK F KM +V
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 243 WNTMISGYAQDGDMSQAKNLFDQSP-HQDVFTWTAMV 278
+ M+ + G + +A + + P + + W A++
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
+K D++ W ++ ++ G+ A F+ MP R +S+ MI GYLR F+ + ++F
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 109 DKMP---------------------------------------QRDLVSWNVMLTGYVRN 129
+M + D+V N ++ Y +
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 130 RRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLL 185
A+++F M Q+D +W AM+ G A NG EA +VF+QM + I++ G+L
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVL 476
Query: 186 AAYVHNGRIEEACRLF-----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-D 239
+A H+G +++A + F D + + L+ + C++ + ++ A ++ KM + +
Sbjct: 477 SACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPN 536
Query: 240 VVSWNTMI--SGYAQDGDMSQ--AKNLFDQSP 267
+ W ++ S D M++ AK + + P
Sbjct: 537 SIVWGALLGASRLHNDEPMAELAAKKILELEP 568
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 293/532 (55%), Gaps = 17/532 (3%)
Query: 254 GDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQ-----NGMLDEARTFFDQMPQKNEISYNA 307
G +S A+ LFD W ++ G+ N +L R + + + ++N
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 308 MVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD 363
+ + + E+ ++ + +++ Y NG + A K+FD MP RD
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 364 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 423
VSW +I ++ G + +AL+M+ + +G + T LS+CA ++AL +G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 424 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 483
E+ FV NAL+ MY KCGS+ A VF G+ ++DV++WN+MI GY HG G +
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
A+ F M GV+P+ IT +G+L CSH GL+ G E+F M+ + +TP+ KHY CM+
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
DL GRAG+LE + +++ W LLG+ +IH N ELGE A + + ++E N+G
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAG 412
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 663
YVL++++Y+A+ +MR +R +Q V G+SW+E+ +++HKF V D HPE
Sbjct: 413 DYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAV 472
Query: 664 IYAFLEELDLKMRREGY----VSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 719
IY+ L E+ + GY + T L D + HSEKLA+A+G++ AG
Sbjct: 473 IYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSAD---TSHSEKLAIAYGLMRTTAG 529
Query: 720 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+R+ KNLRVC DCH+ K++SK R II+RD RFHHF +GICSC DYW
Sbjct: 530 TTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLA 104
V PDL +N + + R L + ++ R ++ +++ Y N +A
Sbjct: 102 VSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIA 161
Query: 105 RDLFDKMPQRDLVSWNVMLTGY----VRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
+FD+MP RDLVSWNVM+ + + N+ L +R+ + D + A+LS A
Sbjct: 162 SKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCA-- 219
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 220
H +A++ +L + R E +F S N L+ +
Sbjct: 220 --------------HVSALNMGVMLHRIACDIRCESC--VFVS---------NALIDMYA 254
Query: 221 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTA 276
K L A +F+ M RDV++WN+MI GY G +A + F + V T+
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 277 MVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEA 327
++ G G++ E F+ M + ++ Y MV Y ++ +++ + E+ A
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
D + +++ Y+ +G + A +FD+ P +D+ +W M+ + G+ ++A + + +M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 299 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIA 350
+ + + A+++ + ++M L S N +I Y + G +
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
A +F+ M +RD ++W ++I GY GH EA++ F ++ G N TF L C+
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGN--ALLGMYFKCGSIGEAND-VFEGIEEKDVVS 467
++ G + H +++ + + V + ++ +Y + G + + + ++ +D V
Sbjct: 321 HQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVL 379
Query: 468 WNTMIAGYARH 478
W T++ H
Sbjct: 380 WRTLLGSCKIH 390
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 299/528 (56%), Gaps = 9/528 (1%)
Query: 253 DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAM 308
+ M+ A ++F F + M+ GYV +EA F+++M Q+ + +Y +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 309 VAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+ + + +++ F+ +V N++I YG+ G++ + +F+ + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHG 423
SW++++S A G + E L +F + + S AL CA+ AL LG IHG
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 424 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 483
+++ E V +L+ MY KCG + +A +F+ +E+++ ++++ MI+G A HG G+
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
AL +F M G++PD + V VL+ACSH+GL+ G F M K+ V P+++HY C++
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
DLLGRAG LEEA + ++++P E W L R+ N ELG+ AA+ + K+ HN G
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPG 438
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDR 663
Y+L+SNLY+ W D R+ + G+++ G+S VE++ K H+F D HP+
Sbjct: 439 DYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKE 498
Query: 664 IYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIR 723
IY L +++ +++ EGY +L +V+EEEK+ LK HS+K+A+AFG+L P G I+
Sbjct: 499 IYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIK 558
Query: 724 VIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+ +NLR+C DCH K IS I R I++RD +RFH F G CSC DYW
Sbjct: 559 IARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 157/348 (45%), Gaps = 32/348 (9%)
Query: 153 MLSGYAQNGYADE---AREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK----S 205
+L+ A +G+ + A +F + +N ++ YV+ EEA ++ +
Sbjct: 69 VLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN 128
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKN 261
+ + ++ CL+ + K + +++ ++ DV N++I+ Y + G+M +
Sbjct: 129 EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSA 188
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY--NAMVAGYVQSNK-- 317
+F++ + +W++MVS GM E F M + + + MV+ +
Sbjct: 189 VFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 318 -----MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
M + L + N+ +++ Y + G + +A +F M +R+ ++++A+IS
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMIS 308
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI------HGQVV 426
G A G E AL MF ++ ++G + + L+ C+ ++ G+++ G+V
Sbjct: 309 GLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Query: 427 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIA 473
T GC V LLG + G + EA + + I EK+ V W T ++
Sbjct: 369 PTAEHYGCLVD--LLG---RAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 135/327 (41%), Gaps = 58/327 (17%)
Query: 73 ALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVR 128
A +F + + +N MI GY+ F A +++M QR D ++ +L R
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 129 NRRLGDARRL----FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGL 184
+ + + +++ F + DV N++++ Y + G + + VF ++ K A SW+ +
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 185 LAAYVHNGRIEEACRLF----------------------------------------DSK 204
++A G E LF +
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 205 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 264
S+ +I L+ +VK L A +F KM R+ ++++ MISG A G+ A +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 265 QSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQS 315
+ + D + ++++ +G++ E R F +M ++ ++ Y +V ++
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 316 NKMDMARELFEAMP-SRNVSSWNTMIT 341
++ A E +++P +N W T ++
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 333/624 (53%), Gaps = 70/624 (11%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQ---KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 178
+++ Y R L DAR +F+++ D+ WN++L +G + A E++ M +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR-G 153
Query: 179 ISWNG-----LLAAYVHNGRIEEACRLFDS-------KSDWELISWNCLMGGFVKRKMLG 226
++ +G +L A + GR CR F + K + ++ N L+ + K +G
Sbjct: 154 LTGDGYILPLILRACRYLGRFG-LCRAFHTQVIQIGLKENLHVV--NELLTLYPKAGRMG 210
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYV 282
A LF +M VR+ +SWN MI G++Q+ D A +F+ + D TWT+++S +
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 283 QNGMLDEARTFFDQMPQKNEI--------------------------------------- 303
Q G ++ +F M
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ-- 361
S NA++ Y + K+ A LF + ++ + SWN++IT + G + +A LF + +
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 362 ------RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
+ V+W ++I G G +++L F +++ N T C LS CA++ AL
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
LG++IHG V++T V NAL+ MY KCG + E + VFE I +KD++SWN++I GY
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
HGF ++AL +F+ M + G PD I +V VLSACSHAGL+++G E FYSM+K + + P
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
+HY C++DLLGR G L+EA ++++NMP EP GALL + R+H N ++ E A +
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 655
+EP +G Y+LLSN+Y+A GRW ++ N+R+ + ++KV+G SW+EV+ K +KF+ G
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGS 690
Query: 656 CFHPEKDRIYAFLEELDLKMRREG 679
E + IY LE+L M ++G
Sbjct: 691 IVQSEFETIYPVLEDLVSHMLKKG 714
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 193/436 (44%), Gaps = 67/436 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR----FSLARDLF 108
DL WN ++ ++ +G ++AL ++ M +R ++ LR R F L R
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 109 DKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
++ Q +L N +LT Y + R+GDA LF MP ++ +SWN M+ G++Q +
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 165 EAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD------------------ 202
A ++F M + + ++W +L+ + G+ E+ + F
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 203 -------------------SKSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 241
K +E L S N L+ + K+ + A LF ++ + +
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQ--------SPHQDVFTWTAMVSGYVQNGMLDEARTF 293
SWN++I+ + G + +A +LF + + +V TWT+++ G G D++ +
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 294 FDQMP----QKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQ 345
F QM N ++ +++ + +++ RE+ S N+ N ++ Y +
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 346 NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA 405
G +++ +F+ + +D +SW +II GY G E+AL+MF + G +
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 406 LSTCADIAALELGKQI 421
LS C+ +E G++I
Sbjct: 542 LSACSHAGLVEKGREI 557
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 157/354 (44%), Gaps = 57/354 (16%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL---- 107
PD + W V+S H + G + L+ F+ M +S NA +SG FS+ +L
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLM----RMSGNA-VSGEALAVFFSVCAELEALS 311
Query: 108 -------------FDK-MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAM 153
F++ +P R N ++ Y + ++ DA LF + K + SWN++
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSR-----NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL 366
Query: 154 LSGYAQNGYADEAREVFYQMPH--------KNAISWNGLLAAYVHNGRIEEACRLFD--- 202
++ + G DEA +F ++ N ++W ++ GR +++ F
Sbjct: 367 ITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Query: 203 -SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV------RDVVSWNTMISGYAQDGD 255
SK ++ C++ + L R++ HV +++ N +++ YA+ G
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHG--HVIRTSMSENILVQNALVNMYAKCGL 484
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAG 311
+S+ +F+ +D+ +W +++ GY +G ++A + FD+M + I+ A+++
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
Query: 312 YVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMP 360
+ ++ RE+F +M R + ++ G+ G + +A ++ MP
Sbjct: 545 CSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 274/450 (60%), Gaps = 4/450 (0%)
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
+L NCL+G ++K LG +R++FD+M RD VS+N+MI GY + G + A+ LFD P
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 268 HQ--DVFTWTAMVSGYVQNG-MLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 324
+ ++ +W +M+SGY Q +D A F MP+K+ IS+N+M+ GYV+ +++ A+ L
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 325 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 384
F+ MP R+V +W TMI GY + G + A+ LFD MP RD V++ ++++GY Q ++ EAL
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 385 NMFIEIKRDGESL-NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
+F +++++ L + +T L A + L +H +V+ + G +G AL+ M
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 444 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
Y KCGSI A VFEGIE K + WN MI G A HG G+ A + ++ + +KPD+IT
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
VGVL+ACSH+GL+ G F M + + + P +HY CM+D+L R+G +E A++L+ MP
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Query: 564 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 623
EP W L A H E GE A+ + +N YVLLSN+YA+ G W D
Sbjct: 515 VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRR 574
Query: 624 MRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 653
+R+ M++ ++K+ G SW+E+ ++H+F V
Sbjct: 575 VRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 196/402 (48%), Gaps = 41/402 (10%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKD 146
N +I YL+ L+R +FD+MP+RD VS+N M+ GYV+ + AR LFD MP K+
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 147 VVSWNAMLSGYAQNG-YADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 205
++SWN+M+SGYAQ D A ++F MP K+ ISWN ++ YV +GRIE+A LFD
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
++++W ++ G+ K + A+ LFD+M RDVV++N+M++GY Q+ +A +F
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF 325
++ +L + T +P ++ S +DM +
Sbjct: 340 MEK--------------ESHLLPDDTTLVIVLPAIAQLGR--------LSKAIDMHLYIV 377
Query: 326 EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 385
E +I Y + G I A +F+ + + W A+I G A G E A +
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFD 437
Query: 386 MFIEIKRDGESLNRSTFSCALSTCAD-------IAALELGKQIHGQVVKTGYETGCFVGN 438
M ++I+R + TF L+ C+ + EL ++ H ++ GC V
Sbjct: 438 MLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH-KIEPRLQHYGCMV-- 494
Query: 439 ALLGMYFKCGSIGEANDVFE--GIEEKDVVSWNTMIAGYARH 478
+ + GSI A ++ E +E DV+ W T + + H
Sbjct: 495 ---DILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTACSHH 532
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 214/435 (49%), Gaps = 27/435 (6%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
DL N +I +++ G + ++F+ MP+R SVSYN+MI GY++ AR+LFD MP
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 113 --QRDLVSWNVMLTGYVRNRRLGD-ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREV 169
++L+SWN M++GY + D A +LF MP+KD++SWN+M+ GY ++G ++A+ +
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
F MP ++ ++W ++ Y G + A LFD +++++N +M G+V+ K A
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 230 KLFDKMH-----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSG 280
++F M + D + ++ AQ G +S+A ++ + + A++
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 281 YVQNGMLDEARTFFDQMPQKNEISYNAMVAGY----VQSNKMDMARELFEAMPSRNVSSW 336
Y + G + A F+ + K+ +NAM+ G + + DM ++ + ++
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALNMFIEIK 391
++ +G + + F++M ++ + + ++ +++G E A N+ E+
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQ-VVKTGYETGCFVGNALLGMYFKCGSI 450
+ + TF L+ C+ E G+ + +++ GY +V L MY G
Sbjct: 515 VEPNDVIWRTF---LTACSHHKEFETGELVAKHLILQAGYNPSSYV--LLSNMYASFGMW 569
Query: 451 GEANDVFEGIEEKDV 465
+ V ++E+ +
Sbjct: 570 KDVRRVRTMMKERKI 584
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 42/310 (13%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
D+ + DL+ WN +I ++++G + A +F+ MPRR V++ MI GY + A+ L
Sbjct: 246 DMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTL 305
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGY 162
FD+MP RD+V++N M+ GYV+N+ +A +F M ++ D + +L AQ G
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 163 ADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR 222
+A ++ + K + G++ A L D S C G ++
Sbjct: 366 LSKAIDMHLYIVEKQ----------FYLGGKLGVA--LIDMYS-------KC---GSIQH 403
Query: 223 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMV 278
ML +F+ + + + WN MI G A G A ++ Q S D T+ ++
Sbjct: 404 AML-----VFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 279 SGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-N 332
+ +G++ E F+ M +K++I Y MV +S +++A+ L E MP N
Sbjct: 459 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPN 518
Query: 333 VSSWNTMITG 342
W T +T
Sbjct: 519 DVIWRTFLTA 528
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 27/246 (10%)
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 422
D W A+I ++ +AL + + +G S+++ + S L C+ + ++ G QIH
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 423 GQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK 482
G + KTG + F+ N L+G+Y KCG +G + +F+ + ++D VS+N+MI GY + G
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 483 QALMVFESMKTIGVKPDEI-------TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
A +F+ M P E+ +M+ + S +D ++ F M + ++
Sbjct: 205 SARELFDLM------PMEMKNLISWNSMISGYAQTSDG--VDIASKLFADMPEKDLIS-- 254
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG-EKAAEMV 594
+ MID + GR+E+A+ L MP +W A+ I G +LG A+ +
Sbjct: 255 ---WNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTW-----ATMIDGYAKLGFVHHAKTL 305
Query: 595 FKMEPH 600
F PH
Sbjct: 306 FDQMPH 311
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 341/639 (53%), Gaps = 63/639 (9%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N ++ + R+G A +F+ MP R+ S+N MI GY+ + + FD MP+RD
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK- 176
SWNV+++G+ + L ARRLF++MP+KDVV+ N++L GY NGYA+EA +F ++
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA 185
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG--------------FVKR 222
+AI+ +L +AC ++ + I L+GG + K
Sbjct: 186 DAITLTTVL----------KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC 235
Query: 223 KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYV 282
L A + +++ D S + +ISGYA G +++++ LFD+ ++ V W +M+SGY+
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 283 QNGMLDEARTFFDQMPQKNEISYNAMVA--------GYVQSNK----------------- 317
N M EA F++M + + A G++++ K
Sbjct: 296 ANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVV 355
Query: 318 ----MDM---------ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+DM A +LF + S + N+MI Y G I A+++F+ + +
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
+SW ++ +G++Q G E L F ++ + + + S +S CA I++LELG+Q+ +
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR 475
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
G ++ V ++L+ +Y KCG + VF+ + + D V WN+MI+GYA +G G +A
Sbjct: 476 ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEA 535
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+ +F+ M G++P +IT + VL+AC++ GL++ G + F SM D+ P +H++CM+D
Sbjct: 536 IDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVD 595
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 604
LL RAG +EEA +L+ MPF+ + W ++L +G +G+KAAE + ++EP NS
Sbjct: 596 LLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVA 655
Query: 605 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
YV LS ++A SG W + +R MR+ V K G SW +
Sbjct: 656 YVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 251/554 (45%), Gaps = 59/554 (10%)
Query: 91 MISGYLRNARFSLARDLFDKMPQRDLVSWNVML--TGYVRNR----RLGDARRLFDSMPQ 144
MI Y + RF L+ M + D + V L + RNR R + L
Sbjct: 1 MILKYNSSYRFYLSSSFLQAM-EVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLS 59
Query: 145 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 204
V+ N +L Y+++G AR +F +MP +N SWN ++ Y+++G + R FD
Sbjct: 60 SIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM 119
Query: 205 SDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 264
+ + SWN ++ GF K L AR+LF+ M +DVV+ N+++ GY +G +A LF
Sbjct: 120 PERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFK 179
Query: 265 Q-SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMD 319
+ + D T T ++ + L + Q+ + + +++V Y + +
Sbjct: 180 ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 320 MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
MA + E + + S + +I+GY G + ++R LFD R + W ++ISGY
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
EAL +F E++ + +R T + ++ C + LE GKQ+H K G V +
Sbjct: 300 KMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 440 LLGMYFKCGS-------------------------------IGEANDVFEGIEEKDVVSW 468
LL MY KCGS I +A VFE IE K ++SW
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF----- 523
N+M G++++G + L F M + + DE+++ V+SAC+ ++ G + F
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 524 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
++ D V+ S +IDL + G +E + + M + W +++ +G
Sbjct: 479 VGLDSDQVVSSS------LIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Query: 584 TELGEKAAEMVFKM 597
G +A ++ KM
Sbjct: 532 ---GFEAIDLFKKM 542
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/548 (23%), Positives = 241/548 (43%), Gaps = 96/548 (17%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+ D WN V+S + G A R+FN MP + V+ N+++ GY+ N A LF +
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 111 MP-QRDLVSWNVMLTG-----------------------------------YVRNRRLGD 134
+ D ++ +L Y + L
Sbjct: 181 LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
A + + + + D S +A++SGYA G +E+R +F + ++ I WN +++ Y+ N
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMK 300
Query: 195 EEACRLF---------DSKSDWELISWNCLMGGF---------------------VKRKM 224
EA LF DS++ +I+ C+ GF V +
Sbjct: 301 MEALVLFNEMRNETREDSRTLAAVIN-ACIGLGFLETGKQMHCHACKFGLIDDIVVASTL 359
Query: 225 LG---------AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
L A KLF ++ D + N+MI Y G + AK +F++ ++ + +W
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFE----- 326
+M +G+ QNG E +F QM + +E+S +++++ + +++ ++F
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV 479
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
+ S V S +++I Y + G + R++FD M + D V W ++ISGYA G EA+++
Sbjct: 480 GLDSDQVVS-SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV-VKTGYETGCFVGNALLGMYF 445
F ++ G + TF L+ C +E G+++ + V G+ + ++ +
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLA 598
Query: 446 KCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGF---GKQALMVFESMKTIGVKPDEI 501
+ G + EA ++ E + + D W++++ G +G+ GK+A + K I ++P+
Sbjct: 599 RAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA-----AEKIIELEPENS 653
Query: 502 TMVGVLSA 509
LSA
Sbjct: 654 VAYVQLSA 661
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
+V+ D + N +I + G D A RVF + +S +S+N+M +G+ +N +
Sbjct: 378 EVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEY 437
Query: 108 FDKMPQRDLVSWNVMLTGY------VRNRRLGD---ARRLFDSMPQKDVVSWNAMLSGYA 158
F +M + DL + V L+ + + LG+ AR + VVS ++++ Y
Sbjct: 438 FHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS-SSLIDLYC 496
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS---------DWEL 209
+ G+ + R VF M + + WN +++ Y NG+ EA LF S + +
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 210 ISWNCLMGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFD 264
+ C G V+ RKLF+ M V D ++ M+ A+ G + +A NL +
Sbjct: 557 VLTACNYCGLVEE-----GRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 265 QSPHQ-DVFTWTAMVSGYVQNG---MLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 320
+ P D W++++ G V NG M +A ++ +N ++Y + A + S +
Sbjct: 612 EMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWES 671
Query: 321 ARELFEAMPSRNV-----SSWN 337
+ + + M NV SSW
Sbjct: 672 SALVRKLMRENNVTKNPGSSWT 693
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 254/420 (60%), Gaps = 2/420 (0%)
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV 313
G ++ A +F + ++V WT+M++GY+ N L AR +FD P+++ + +N M++GY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 314 QSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 373
+ M AR LF+ MP R+V SWNT++ GY GD+ ++FD MP+R+ SW +I G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 374 YAQTGHYEEALNMFIEIKRDGESL-NRSTFSCALSTCADIAALELGKQIHGQVVKTGY-E 431
YAQ G E L F + +G + N +T + LS CA + A + GK +H GY +
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
V NAL+ MY KCG+I A +VF+GI+ +D++SWNTMI G A HG G +AL +F M
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 551
K G+ PD++T VGVL AC H GL++ G YF SM D+S+ P +H C++DLL RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 552 LEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNL 611
L +A + + MP + A W LLGAS+++ ++GE A E + K+EP N +V+LSN+
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
Query: 612 YAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 671
Y +GR+ DA ++ MRD G +K G SW+E + + KF HP + + L EL
Sbjct: 402 YGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 198/425 (46%), Gaps = 49/425 (11%)
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 220
G A +VF +M KN + W ++ Y+ N + A R FD + +++ WN ++ G++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 221 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
+ + AR LFD+M RDV+SWNT++ GYA GDM + +FD P ++VF+W ++ G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 281 YVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGYVQSNKMDMARELFE-----AMPS 330
Y QNG + E F +M + N+ + +++ + D + + +
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
+V+ N +I YG+ G I A ++F + +RD +SW +I+G A GH EALN+F E+
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
K G S ++ TF L C + +E G Y F +++ CG +
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDG---------LAYFNSMFTDFSIMPEIEHCGCV 332
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
D++S R GF QA+ E + + VK D + +L A
Sbjct: 333 ------------VDLLS---------RAGFLTQAV---EFINKMPVKADAVIWATLLGAS 368
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRNMPFEPP 567
+D G + K P+ ++ + ++ G AGR ++A L MR+ F+
Sbjct: 369 KVYKKVDIGEVALEELIKLEPRNPA--NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
Query: 568 A-ASW 571
A SW
Sbjct: 427 AGVSW 431
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 174/382 (45%), Gaps = 56/382 (14%)
Query: 68 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 127
G SA +VF M ++ V + +MI+GYL N AR FD P+RD+V WN M++GY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 128 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA 187
+ +AR LFD MP +DV+SWN +L GYA G + VF MP +N SWNGL+
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 188 YVHNGRIEEACRLFDSKSD-----------------------WELISW------------ 212
Y NGR+ E F D ++ W
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 213 ------NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
N L+ + K + A ++F + RD++SWNTMI+G A G ++A NLF +
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 267 PHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYV-QSNK 317
+ D T+ ++ G++++ +F+ M EI + V + ++
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 318 MDMARELFEAMPSR-NVSSWNTMI--TGYGQNGDIAQA--RKLFDMMPQRDCVSWAAIIS 372
+ A E MP + + W T++ + + DI + +L + P R+ ++ + +
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP-RNPANFVMLSN 400
Query: 373 GYAQTGHYEEALNMFIEIKRDG 394
Y G +++A + + ++ G
Sbjct: 401 IYGDAGRFDDAARLKVAMRDTG 422
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 284/509 (55%), Gaps = 42/509 (8%)
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
N L+G ++K A K+FD+MH+R++ SWN M+SGY + G + +A+ +FD P +DV
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISY---------------------NA 307
+W MV GY Q+G L EA F+ + + NE S+
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 308 MVAG--------------YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQAR 353
+VAG Y + +M+ A+ F+ M +++ W T+I+GY + GD+ A
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
KLF MP+++ VSW A+I+GY + G AL++F ++ G + TFS L A IA
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMI 472
+L GK+IHG +++T V ++L+ MY K GS+ + VF ++K D V WNTMI
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMI 385
Query: 473 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 532
+ A+HG G +AL + + M V+P+ T+V +L+ACSH+GL++ G +F SM + +
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
P +HY C+IDLLGRAG +E + MPFEP W A+LG RIHGN ELG+KAA+
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFT 652
+ K++P +S Y+LLS++YA G+W +R M+ V K SW+E++ K+ FT
Sbjct: 506 ELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFT 565
Query: 653 VGDC--FHPEKDRIYAFLEELDLKMRREG 679
V D H K+ IY L L + E
Sbjct: 566 VSDGSHAHARKEEIYFILHNLAAVIEEEA 594
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 228/467 (48%), Gaps = 54/467 (11%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D LK K I H++ R +++ N +I Y++ + A +FD+
Sbjct: 58 DTKSLKQGKWIHRHLK----------ITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVF 170
M R+L SWN M++GYV++ L AR +FDSMP++DVVSWN M+ GYAQ+G EA F
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEAL-WF 166
Query: 171 YQMPHKNAISWN-----GLLAAYVHNGRIEEACRLFDSKSDWEL--------ISWNC-LM 216
Y+ ++ I +N GLL A V + +++ + ++ ++ + +C ++
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQ-----LNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 217 GGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
+ K + +A++ FD+M V+D+ W T+ISGYA+ GDM A+ LF + P ++ +WTA
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTA 281
Query: 277 MVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
+++GYV+ G + A F +M + + ++++ + + +E+ M N
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 333 VSS----WNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEALNMF 387
V +++I Y ++G + + ++F + + DCV W +IS AQ G +AL M
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQ------IHGQVVKTGYETGCFVGNALL 441
++ + NR+T L+ C+ +E G + + +V C + LL
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLID--LL 459
Query: 442 GMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG---FGKQA 484
G + G E E + E D WN ++ HG GK+A
Sbjct: 460 G---RAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKA 503
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 48/308 (15%)
Query: 364 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHG 423
CV+ + +S +A +A++ + + G L + L C D +L+ GK IH
Sbjct: 12 CVA-QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHR 70
Query: 424 QVVKTGYE-TGCFVGNALLGMYFKCGS-------------------------------IG 451
+ TG++ + N L+GMY KCG +
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLV 130
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
A VF+ + E+DVVSWNTM+ GYA+ G +AL ++ + G+K +E + G+L+AC
Sbjct: 131 RARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 512 HAGLIDRGTEYFYSMNKDYSVTP--SSKHYTC-MIDLLGRAGRLEEAQDLMRNMPFEPPA 568
+ R + + V S+ +C +ID + G++E A+ M +
Sbjct: 191 KS----RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DI 245
Query: 569 ASWGALLGASRIHGNTELGE-KAAEMVF-KMEPHNSGMYVLLSNLYAASGRWADAGNMRS 626
W L I G +LG+ +AAE +F +M N + L Y G A ++
Sbjct: 246 HIWTTL-----ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 627 RMRDVGVQ 634
+M +GV+
Sbjct: 301 KMIALGVK 308
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 354 bits (908), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 357/658 (54%), Gaps = 38/658 (5%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ +I ++++G+ D A VF+ +P +S+V++ MISG ++ R ++ LF +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRL-------------FDSMPQKDVVSWNAMLSGY 157
+ + NV+ GY+ + L L + D N ++ Y
Sbjct: 240 LMED-----NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 158 AQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWN 213
+ G A ++F MP+KN ISW LL+ Y N +EA LF S S + ++ + +
Sbjct: 295 VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 214 CLMGGFVKRKMLGAARKLFD---KMHV-RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ 269
++ LG ++ K ++ D N++I YA+ ++ A+ +FD
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 270 DVFTWTAMVSGYVQNGM---LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAR 322
DV + AM+ GY + G L EA F M + + +++ +++ + +++
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 323 EL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 378
++ F+ + ++ + + +I Y + +R +FD M +D V W ++ +GY Q
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 379 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 438
EEALN+F+E++ E + TF+ ++ ++A+++LG++ H Q++K G E ++ N
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 439 ALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 498
ALL MY KCGS +A+ F+ +DVV WN++I+ YA HG GK+AL + E M + G++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 499 DEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 558
+ IT VGVLSACSHAGL++ G + F M + + + P ++HY CM+ LLGRAGRL +A++L
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 559 MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 618
+ MP +P A W +LL GN EL E AAEM +P +SG + +LSN+YA+ G W
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 619 ADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 676
+A +R RM+ GV K G SW+ + ++H F D H + ++IY L++L +++R
Sbjct: 774 TEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/579 (24%), Positives = 260/579 (44%), Gaps = 84/579 (14%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTG----------------YVRNRRL 132
N +I+ Y R AR +F+KMP+R+LVSW+ M++ + R R+
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 133 GDARRLFDSMPQ--------------------------KDVVSWNAMLSGYAQNGYADEA 166
+ S Q +DV ++ Y ++G D A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 167 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 226
R VF +P K+ ++W +++ V GR + +LF ++L+ N + G++ +L
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF-----YQLMEDNVVPDGYILSTVLS 257
Query: 227 AARKL-----FDKMHVR--------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT 273
A L ++H D N +I Y + G + A LF+ P++++ +
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 274 WTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
WT ++SGY QN + EA F M + + + ++++ + + ++
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 330 SRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG---HYEE 382
N+ + N++I Y + + ARK+FD+ D V + A+I GY++ G E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
ALN+F +++ + TF L A + +L L KQIHG + K G F G+AL+
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+Y C + ++ VF+ ++ KD+V WN+M AGY + ++AL +F ++ +PDE T
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+++A + + G E+ + K + + ++D+ + G E+A
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHK----- 611
Query: 563 PFEPPAA----SWGALLGASRIHGNTELGEKAAEMVFKM 597
F+ A+ W +++ + HG G+KA +M+ KM
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGE---GKKALQMLEKM 647
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 13/282 (4%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-GE 395
N +I Y + G + ARK+F+ MP+R+ VSW+ ++S G YEE+L +F+E R +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 396 SLNRSTFSCALSTCA--DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
S N S + C+ D + Q+ +VK+G++ +VG L+ Y K G+I A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
VF+ + EK V+W TMI+G + G +L +F + V PD + VLSACS
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 514 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 573
++ G + + + Y + + +ID + GR+ A L MP SW
Sbjct: 263 PFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTT 320
Query: 574 LLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
LL + L ++A E+ M + L ++YA S
Sbjct: 321 LLSG---YKQNALHKEAMELFTSMSK-----FGLKPDMYACS 354
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 148/310 (47%), Gaps = 29/310 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSL 103
++K DL+ WN + + +++ + AL +F + R ++ M++ A L
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 104 ARDLFDKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
++ ++ +R L N +L Y + DA + FDS +DVV WN+++S YA
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELIS 211
+G +A ++ +M + N I++ G+L+A H G +E+ + F+ + E
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH 693
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRD-VVSWNTMISGYAQDGDMSQAKNLFDQ---SP 267
+ C++ + L AR+L +KM + + W +++SG A+ G++ A++ + S
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQM--------PQKNEISYNAMVAGYVQSNKMD 319
+D ++T + + Y GM EA+ ++M P ++ I N V ++ +K
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813
Query: 320 M-ARELFEAM 328
A +++E +
Sbjct: 814 CKANQIYEVL 823
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
R F+ L A L +HGQ++ G E ++ N L+ +Y + G + A VFE
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVF-ESMKTIGVKPDEITMVGVLSACSHAGLID 517
+ E+++VSW+TM++ HG +++L+VF E +T P+E + + ACS GL
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDG 161
Query: 518 RGTEYFYSMNKDYSVTPSSKHY---TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
RG + + + + T +ID + G ++ A+ + +P E +W +
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTM 220
Query: 575 L 575
+
Sbjct: 221 I 221
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 305/544 (56%), Gaps = 30/544 (5%)
Query: 255 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQKNEISYN------- 306
D++ A +FD + F W ++ + +EA + +M ++ E S +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 307 ----AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 362
A + G+ + ++ ++ + +V N +I YG G + ARK+FD MP+R
Sbjct: 158 LKACAYIFGFSEGKQVHC--QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 422
VSW ++I + G Y+ AL +F E++R E + T LS CA + +L LG H
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 423 GQVVK---TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 479
+++ V N+L+ MY KCGS+ A VF+G++++D+ SWN MI G+A HG
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 480 FGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
++A+ F+ M K V+P+ +T VG+L AC+H G +++G +YF M +DY + P+ +
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG-NTELGEKAAEMVFK 596
HY C++DL+ RAG + EA D++ +MP +P A W +LL A G + EL E+ A +
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 597 MEPHN-------SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIH 649
+ N SG YVLLS +YA++ RW D G +R M + G++K G S +E+ H
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Query: 650 KFTVGDCFHPEKDRIYAFLEELDLKMRREGYVS--STKLVLHDVEEEEKEHMLKYHSEKL 707
+F GD HP+ +IY L+ +D ++R GY+ S ++ + KE+ L+ HSE+L
Sbjct: 515 EFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERL 574
Query: 708 AVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSC 767
A+AFG++ +P PIR+ KNLRVC DCH K ISK+ II+RD RFHHF +G CSC
Sbjct: 575 AIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSC 634
Query: 768 GDYW 771
DYW
Sbjct: 635 LDYW 638
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 48/350 (13%)
Query: 166 AREVFYQMPHKNAISWNGLLAAYVHN-GRIEEACRLF----------DSKSDWELISWNC 214
A VF + + ++ WN L+ A H+ R EEA L+ K + + C
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 215 -LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT 273
+ GF + K + ++ DV N +I Y G + A+ +FD+ P + + +
Sbjct: 162 AYIFGFSEGKQVHC--QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVS 219
Query: 274 WTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
W +M+ V+ G D A F +M + E GY + + + S ++
Sbjct: 220 WNSMIDALVRFGEYDSALQLFREMQRSFEPD------GYTMQSVLSAC----AGLGSLSL 269
Query: 334 SSW--------------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 373
+W N++I Y + G + A ++F M +RD SW A+I G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 374 YAQTGHYEEALNMFIEI--KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GY 430
+A G EEA+N F + KR+ N TF L C + G+Q +V+
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 479
E ++ + + G I EA D+ + K D V W +++ + G
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 210/536 (39%), Gaps = 106/536 (19%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQN-GYADEAREVFYQM-------PHKNAISWNGLLA 186
A R+FDS+ WN ++ A + +EA ++ +M P K+ +
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 187 AYV---HNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 243
AY+ G+ + C++ ++ N L+ + L ARK+FD+M R +VSW
Sbjct: 162 AYIFGFSEGK-QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 220
Query: 244 NTMISGYAQDGDMSQAKNLF---DQSPHQDVFTWTAMVSGYVQNGMLDE---ARTFF--- 294
N+MI + G+ A LF +S D +T +++S G L A F
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 295 -DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA- 352
D + + N+++ Y + + MA ++F+ M R+++SWN MI G+ +G +A
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 340
Query: 353 ------------------------------------RKLFDMMPQRDCVS-----WAAII 371
R+ FDMM + C+ + I+
Sbjct: 341 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 400
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLN-RSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
A+ G+ EA++M + + +++ RS + C A++EL ++I ++ T
Sbjct: 401 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLD---ACCKKGASVELSEEIARNIIGTKE 457
Query: 431 ETGCFVGNA-----LLGMYFKCGS----IGEANDVFE--GIEEKDVVSWNTMIAGYARHG 479
+ GN LL + S +G + GI ++ S + I G +
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS-SIEINGISHEF 516
Query: 480 FG-----KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
F Q +++ +K I D + +G L S A L+D + +K+YS+
Sbjct: 517 FAGDTSHPQTKQIYQQLKVID---DRLRSIGYLPDRSQAPLVDATND----GSKEYSLRL 569
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
S+ L+ N+P + P + L + H T+L K
Sbjct: 570 HSERLAIAFGLI--------------NLPPQTPIRIFKNLRVCNDCHEVTKLISKV 611
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 53/255 (20%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ N +I + G D A +VF+ MP RS VS+N+MI +R + A LF +M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 113 QR-----------------------------------------DLVSWNVMLTGYVRNRR 131
+ D++ N ++ Y +
Sbjct: 245 RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK------NAISWNGLL 185
L A ++F M ++D+ SWNAM+ G+A +G A+EA F +M K N++++ GLL
Sbjct: 305 LRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Query: 186 AAYVHNGRIEEACRLFDSKS-----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-D 239
A H G + + + FD + L + C++ + + A + M ++ D
Sbjct: 365 IACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPD 424
Query: 240 VVSWNTMISGYAQDG 254
V W +++ + G
Sbjct: 425 AVIWRSLLDACCKKG 439
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 108/265 (40%), Gaps = 26/265 (9%)
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYE---TGCFVGNALLGMYFKCGSIGEAN 454
++ FS A TC+D++ L KQ+H ++T Y F+ +L + + A
Sbjct: 48 HQRIFSLA-ETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAF 103
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGK-QALMVFESMKTIG-VKPDEITMVGVLSACSH 512
VF+ IE WNT+I A K +A M++ M G PD+ T VL AC++
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY 163
Query: 513 AGLIDRGTEYFYSMNK-----DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 567
G + + K D V +I L G G L+ A+ + MP E
Sbjct: 164 IFGFSEGKQVHCQIVKHGFGGDVYVNNG------LIHLYGSCGCLDLARKVFDEMP-ERS 216
Query: 568 AASWGALLGASRIHGNTELG-EKAAEMVFKMEPHNSGMYVLLSNLYA----ASGRWADAG 622
SW +++ A G + + EM EP M +LS + G WA A
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 623 NMRSRMRDVGVQKVTGYSWVEVQNK 647
+R DV + + S +E+ K
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCK 301
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 215/676 (31%), Positives = 346/676 (51%), Gaps = 41/676 (6%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFS---LARDLFDKMPQR 114
N +++ + + G A +FN + + VS+N++I+GY +N S LF +M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 115 DLVSWNVMLTGY------VRNRRLG-DARRLFDSMPQ-KDVVSWNAMLSGYAQNGYADEA 166
D++ L G +++ +G A L M D+ +++ Y + G ++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 167 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD---------SKSDWELISWNCLMG 217
+VF MP +N +W+ +++ Y GR+EEA ++F+ S SD+ + ++
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY---VFTAVLS 229
Query: 218 GFVKRKMLGAARKLFDKMHVRD-----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
+G R++ + +++ V N +++ Y++ +++A +FD S ++
Sbjct: 230 SLAATIYVGLGRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG---------YVQSNKMDMARE 323
TW+AMV+GY QNG EA F +M + G Y++ K +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK-QLHSF 347
Query: 324 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
L + R++ + ++ Y + G +A ARK FD + +RD W ++ISGY Q EEA
Sbjct: 348 LLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEA 407
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
L ++ +K G N T + L C+ +A LELGKQ+HG +K G+ +G+AL M
Sbjct: 408 LILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTM 467
Query: 444 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
Y KCGS+ + N VF KDVVSWN MI+G + +G G +AL +FE M G++PD++T
Sbjct: 468 YSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
V ++SACSH G ++RG YF M+ + P HY CM+DLL RAG+L+EA++ + +
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Query: 564 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 623
+ W LL A + HG ELG A E + + S YV LS +Y A GR D
Sbjct: 588 IDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVER 647
Query: 624 MRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSS 683
+ MR GV K G SW+E++N+ H F VGD HP + + + +M EG+V
Sbjct: 648 VWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV-- 705
Query: 684 TKLVLHDVEEEEKEHM 699
T L VEEEE +
Sbjct: 706 TVLDSSFVEEEEGTQL 721
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 188/469 (40%), Gaps = 107/469 (22%)
Query: 53 DLLKWNKVISTHMRNGHCDSA---LRVFNTMPRRSSVSYNAMISGYLRNARFSL------ 103
D++ WN +I+ + +NG S+ +++F M R + NA + A SL
Sbjct: 79 DVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 104 --ARDLFDKMPQRDLVSWNVMLTG-YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
A L KM + + L G Y + + D ++F MP+++ +W+ M+SGYA
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 161 GYADEAREVF------------------------------------YQMPHKNAISW--- 181
G +EA +VF + + KN +
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 182 --NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV-- 237
N L+ Y + EAC++FDS D I+W+ ++ G+ + A KLF +M
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 238 -------------------------------------RDVVSWNTMISGYAQDGDMSQAK 260
R + + ++ YA+ G ++ A+
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 320
FD +DV WT+++SGYVQN +EA + +M I + +A +++
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 321 ARELFEAMPSRNV-----------SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 369
EL + + + S+ +TM Y + G + +F P +D VSW A
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTM---YSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
+ISG + G +EAL +F E+ +G + TF +S C+ +E G
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 33/256 (12%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISG---------YLRNARF 101
D + + W+ +++ + +NG A+++F+ M I G YL +
Sbjct: 284 DRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK- 342
Query: 102 SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG 161
L L +R L + ++ Y + L DAR+ FD + ++DV W +++SGY QN
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 162 YADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK 221
+EA ++ +M I + +A+ + +AC + + + + + GF
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMAS------VLKACSSLATLELGKQVHGHTIKHGFGL 456
Query: 222 RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 281
+G+A +TM Y++ G + +F ++P++DV +W AM+SG
Sbjct: 457 EVPIGSA--------------LSTM---YSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 282 VQNGMLDEARTFFDQM 297
NG DEA F++M
Sbjct: 500 SHNGQGDEALELFEEM 515
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
L G+ +HGQ+++TG T N L+ Y KCG + +A+ +F I KDVVSWN++I G
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 475 YARHG---FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 531
Y+++G + +F M+ + P+ T+ G+ A S G + +++ S
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA-HALVVKMS 148
Query: 532 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 591
T ++ + +AG +E+ + MP E +W ++ G E K
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 592 EMVFKMEPHNS 602
+ + + S
Sbjct: 208 NLFLREKEEGS 218
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 225/766 (29%), Positives = 364/766 (47%), Gaps = 148/766 (19%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D++ WNK+I+ + ++ A FN MP R VS+N+M+SGYL+N + ++F M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 113 QR---------------------------------------DLVSWNVMLTGYVRNRRLG 133
+ D+V+ + +L Y + +R
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 193
++ R+F +P+K+ VSW+A+++G QN A + F +M NA + A+ + +
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 194 IEEACRLFDS------KSDWEL--ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
RL KSD+ I + + K + A+ LFD + S+N
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 246 MISGYAQDGDMSQAKNLF----------DQSPHQDVFTWTAMVSGY-------------- 281
MI+GY+Q+ +A LF D+ VF A+V G
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 282 ------VQNGMLD---------EARTFFDQMPQKNEISYNAMVAGYVQSNK--------- 317
V N +D EA FD+M +++ +S+NA++A + Q+ K
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 318 -----------------------------MDMARELFEAMPSRNVSSWNTMITGYGQNGD 348
M++ + ++ + N S ++I Y + G
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 349 IAQARKLFDMMPQRD--------------------CVSWAAIISGYAQTGHYEEALNMFI 388
I +A K+ QR CVSW +IISGY E+A +F
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 389 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
+ G + ++ T++ L TCA++A+ LGKQIH QV+K ++ ++ + L+ MY KCG
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 449 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
+ ++ +FE +D V+WN MI GYA HG G++A+ +FE M +KP+ +T + +L
Sbjct: 653 DLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 509 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 568
AC+H GLID+G EYFY M +DY + P HY+ M+D+LG++G+++ A +L+R MPFE
Sbjct: 713 ACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADD 772
Query: 569 ASWGALLGASRIH-GNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 627
W LLG IH N E+ E+A + +++P +S Y LLSN+YA +G W ++R
Sbjct: 773 VIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRN 832
Query: 628 MRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDL 673
MR ++K G SWVE+++++H F VGD HP + IY EEL L
Sbjct: 833 MRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIY---EELGL 875
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 167/628 (26%), Positives = 263/628 (41%), Gaps = 116/628 (18%)
Query: 82 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDS 141
R ++ N ++ Y + F A +FDKMP RD+VSWN M+ GY ++ + A F+
Sbjct: 80 RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNM 139
Query: 142 MPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK------------------------- 176
MP +DVVSWN+MLSGY QNG + ++ EVF M +
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 177 --------------NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR 222
+ ++ + LL Y R E+ R+F + +SW+ ++ G V+
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
Query: 223 KMLGAARKLFDKMH-VRDVVS---WNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTW 274
+L A K F +M V VS + +++ A ++ L + D
Sbjct: 260 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 319
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR--- 331
TA + Y + + +A+ FD N SYNAM+ GY Q A LF + S
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 332 ------------------------------------NVSSWNTMITGYGQNGDIAQARKL 355
+V N I YG+ +A+A ++
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
FD M +RD VSW AII+ + Q G E L +F+ + R + TF L C +L
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSL 498
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV-------------FEGIE- 461
G +IH +VK+G + VG +L+ MY KCG I EA + E +E
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 462 ------EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
++ VSWN++I+GY + A M+F M +G+ PD+ T VL C++
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTC--MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGA 573
G + + K S Y C ++D+ + G L +++ LM +W A
Sbjct: 619 AGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNA 674
Query: 574 LLGASRIHGNTELGEKAAEMVFKMEPHN 601
++ HG GE+A ++ +M N
Sbjct: 675 MICGYAHHGK---GEEAIQLFERMILEN 699
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 39/228 (17%)
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
+ + F + S++ + FS CA ALELGKQ H ++ +G+ FV N LL
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR------------------------- 477
+Y A+ VF+ + +DVVSWN MI GY++
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 478 ------HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNK 528
+G +++ VF M G++ D T +L CS G + +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
D V +S ++D+ + R E+ + + +P E + SW A++
Sbjct: 212 DTDVVAASA----LLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIA 254
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 301/551 (54%), Gaps = 25/551 (4%)
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
+G AR+LFD PQ+D ++ LS Y E R Q P A+ +
Sbjct: 26 IGYARKLFDQRPQRD----DSFLSNSMIKAYL-ETR----QYPDSFAL----------YR 66
Query: 192 GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA 251
+E C D+ + + ++ +C + V + L +++ D+ ++ YA
Sbjct: 67 DLRKETCFAPDNFT-FTTLTKSCSLSMCVYQG-LQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 252 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-KNEISYNAMVA 310
+ G M A+N FD+ PH+ +WTA++SGY++ G LD A FDQMP K+ + YNAM+
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMD 184
Query: 311 GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 370
G+V+S M AR LF+ M + V +W TMI GY DI ARKLFD MP+R+ VSW +
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTM 244
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
I GY Q +E + +F E++ + T L +D AL LG+ H V +
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK 304
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
+ V A+L MY KCG I +A +F+ + EK V SWN MI GYA +G + AL +F
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
+M I KPDEITM+ V++AC+H GL++ G ++F+ M ++ + +HY CM+DLLGRA
Sbjct: 365 TM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRA 422
Query: 550 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 609
G L+EA+DL+ NMPFEP + L A + + E E+ + ++EP N G YVLL
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLR 482
Query: 610 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 669
NLYAA RW D G +++ MR +K G S +E+ + +F GD HP + I+ L
Sbjct: 483 NLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLG 542
Query: 670 ELDLKMRREGY 680
+L + M E Y
Sbjct: 543 DLLMHMNEEKY 553
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 171/360 (47%), Gaps = 59/360 (16%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ-RDLVS 118
V+ + + G A F+ MP RS VS+ A+ISGY+R LA LFD+MP +D+V
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVI 178
Query: 119 WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 178
+N M+ G+V++ + ARRLFD M K V++W M+ GY D AR++F MP +N
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNL 238
Query: 179 ISWNGLLAAYVHNGRIEEACRLFD--------------------SKSDWELISWNCLMGG 218
+SWN ++ Y N + +E RLF + SD +S
Sbjct: 239 VSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHC 298
Query: 219 FVKRKMLG--------------------AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ 258
FV+RK L A+++FD+M + V SWN MI GYA +G+
Sbjct: 299 FVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARA 358
Query: 259 AKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAM 308
A +LF ++ P D T A+++ G+++E R +F M + K E Y M
Sbjct: 359 ALDLFVTMMIEEKP--DEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIE-HYGCM 415
Query: 309 VAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRD 363
V ++ + A +L MP N ++ ++ GQ DI +A +K ++ PQ D
Sbjct: 416 VDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQND 475
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 177/356 (49%), Gaps = 20/356 (5%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ-KDV 147
++ Y + + AR+ FD+MP R VSW +++GY+R L A +LFD MP KDV
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 207
V +NAM+ G+ ++G AR +F +M HK I+W ++ Y + I+ A +LFD+ +
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAK-- 260
L+SWN ++GG+ + K +LF +M D V+ +++ + G +S +
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 261 NLFDQSPHQD--VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKM 318
+ F Q D V TA++ Y + G +++A+ FD+MP+K S+NAM+ GY +
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 319 DMARELFEAMPSRNVSSWNTM---ITGYGQNGDIAQARKLFDMMPQRDCVS----WAAII 371
A +LF M TM IT G + + RK F +M + + + ++
Sbjct: 357 RAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMV 416
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
+ G +EA ++ + + + S+F LS C +E ++I + V+
Sbjct: 417 DLLGRAGSLKEAEDLITNMPFEPNGIILSSF---LSACGQYKDIERAERILKKAVE 469
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 314/647 (48%), Gaps = 106/647 (16%)
Query: 126 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISW 181
Y + R LG AR+LFD MP+++++S+N+++SGY Q G+ ++A E+F + N ++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 182 NGLLAAYVHNGRIEEACRL----------FDSKSDWELISWNCLMGGFVKRKMLGAARKL 231
G L G E C L + ++ N L+ + K L A L
Sbjct: 152 AGAL------GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
Query: 232 FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ---------------------- 269
FD+ RD VSWN++ISGY + G + NL +
Sbjct: 206 FDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 270 --------------------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 309
D+ TA++ Y +NG L EA F MP KN ++YNAM+
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 310 AGYVQSNK-------------MDMARELFEAMPS------------------RNVSSW-- 336
+G++Q ++ MDM R E PS R + +
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 337 -----------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALN 385
+ +I Y G + F ++D SW ++I + Q E A +
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYF 445
+F ++ T S +S CAD AAL G+QI G +K+G + V + + MY
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 446 KCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVG 505
K G++ AN VF ++ DV +++ MI+ A+HG +AL +FESMKT G+KP++ +G
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 506 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 565
VL AC H GL+ +G +YF M DY + P+ KH+TC++DLLGR GRL +A++L+ + F+
Sbjct: 566 VLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ 625
Query: 566 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMR 625
+W ALL + R++ ++ +G++ AE + ++EP SG YVLL N+Y SG + A +R
Sbjct: 626 DHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVR 685
Query: 626 SRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELD 672
MRD GV+K SW+ + N+ H F V D HP IY LE +D
Sbjct: 686 ELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
+L+ + T A ++ LGK HG ++K+ ++ N LL MY KC +G A
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
+F+ + E++++S+N++I+GY + GF +QA+ +F + +K D+ T G L C
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+D G E + + ++ +ID+ + G+L++A L E SW +L
Sbjct: 164 LDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSL- 220
Query: 576 GASRIHGNTELGEKAAEMVFKMEPHNSGM 604
I G +G + + H G+
Sbjct: 221 ----ISGYVRVGAAEEPLNLLAKMHRDGL 245
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 266/453 (58%), Gaps = 4/453 (0%)
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 287
A +F + +V + MI G+ G + +L+ + H V +++ ++ L
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL 139
Query: 288 DEARTFFDQMPQKNEISYNA----MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 343
R Q+ + S + M+ Y +S ++ A+++F+ MP R+ + MI Y
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ G I +A +LF + +D V W A+I G + +AL +F E++ + S N T
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
C LS C+D+ ALELG+ +H V E FVGNAL+ MY +CG I EA VF + +K
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 523
DV+S+NTMI+G A HG +A+ F M G +P+++T+V +L+ACSH GL+D G E F
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 524 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
SM + ++V P +HY C++DLLGR GRLEEA + N+P EP G LL A +IHGN
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 584 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
ELGEK A+ +F+ E +SG YVLLSNLYA+SG+W ++ +R MRD G++K G S +E
Sbjct: 440 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Query: 644 VQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 676
V N+IH+F VGD HP K+ IY L+EL+ +R
Sbjct: 500 VDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 189/445 (42%), Gaps = 83/445 (18%)
Query: 71 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT------ 124
D A VF+ + + Y AMI G++ + R + L+ +M ++ N ++T
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
Query: 125 ---------------GYVRNRRLG--------------DARRLFDSMPQKDVVSWNAMLS 155
G+ +R +G +A+++FD MP +D V+ M++
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 156 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWN-- 213
Y++ G+ EA E+F + K+ + W ++ V N + +A LF + E +S N
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF-REMQMENVSANEF 256
Query: 214 ---CLMGGFVKRKMLGAARKLF-----DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
C++ L R + +M + + V N +I+ Y++ GD+++A+ +F
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG-NALINMYSRCGDINEARRVFRV 315
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMA 321
+DV ++ M+SG +G EA F M + N+++ A++ +D+
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
E+F +M +++F++ PQ + + I+ + G E
Sbjct: 376 LEVFNSM------------------------KRVFNVEPQIE--HYGCIVDLLGRVGRLE 409
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNAL 440
EA I + + + T LS C +ELG++I ++ ++ ++G +V L
Sbjct: 410 EAYRFIENIPIEPDHIMLGTL---LSACKIHGNMELGEKIAKRLFESENPDSGTYV--LL 464
Query: 441 LGMYFKCGSIGEANDVFEGIEEKDV 465
+Y G E+ ++ E + + +
Sbjct: 465 SNLYASSGKWKESTEIRESMRDSGI 489
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 34/303 (11%)
Query: 59 KVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS 118
K++ + ++G +A ++F+ MP R V+ MI+ Y A +LF + +D V
Sbjct: 163 KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVC 222
Query: 119 WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN-----AMLSGYAQNGYADEAREVF--- 170
W M+ G VRN+ + A LF M Q + VS N +LS + G + R V
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 171 --YQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
+M N + N L+ Y G I EA R+F D ++IS+N ++ G M GA+
Sbjct: 282 ENQRMELSNFVG-NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA---MHGAS 337
Query: 229 -------RKLFDKMHVRDVVSWNTMISGYAQDGDM-------SQAKNLFDQSPHQDVFTW 274
R + ++ + V+ +++ + G + + K +F+ P + +
Sbjct: 338 VEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGC 397
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
+ G V G L+EA F + +P + + + M+ + + K+ EL E + R
Sbjct: 398 IVDLLGRV--GRLEEAYRFIENIPIEPD---HIMLGTLLSACKIHGNMELGEKIAKRLFE 452
Query: 335 SWN 337
S N
Sbjct: 453 SEN 455
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 54/303 (17%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ D D + +I+ + G AL +F + + +V + AMI G +RN + A +L
Sbjct: 183 EMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALEL 242
Query: 108 FDKMPQRDLVS----------------------W-----------------NVMLTGYVR 128
F +M ++ + W N ++ Y R
Sbjct: 243 FREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSR 302
Query: 129 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGL 184
+ +ARR+F M KDV+S+N M+SG A +G + EA F M ++ N ++ L
Sbjct: 303 CGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL 362
Query: 185 LAAYVHNGRIEEACRLFDS-----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR- 238
L A H G ++ +F+S + ++ + C++ + L A + + + +
Sbjct: 363 LNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEP 422
Query: 239 DVVSWNTMISGYAQDGDMSQ----AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
D + T++S G+M AK LF +S + D T+ + + Y +G E+
Sbjct: 423 DHIMLGTLLSACKIHGNMELGEKIAKRLF-ESENPDSGTYVLLSNLYASSGKWKESTEIR 481
Query: 295 DQM 297
+ M
Sbjct: 482 ESM 484
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 44/266 (16%)
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
R T L +C +IA + IH ++++T ++ FV L+ + S+ A DVF
Sbjct: 29 RKTLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS------- 511
+ +V + MI G+ G + ++ M V PD + VL AC
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI 145
Query: 512 HAGLIDRG-----------------TEYFYSMNKDYSVTPSSKHY--TCMIDLLGRAGRL 552
HA ++ G + + K + P H T MI+ G +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 553 EEAQDLMRNMPFEPPAASWGALL-GASRIHGNTELGEKAAEMVFKMEPHN--SGMYVLLS 609
+EA +L +++ + W A++ G R N E+ KA E+ +M+ N + + +
Sbjct: 206 KEALELFQDVKIK-DTVCWTAMIDGLVR---NKEMN-KALELFREMQMENVSANEFTAVC 260
Query: 610 NLYAAS-------GRWADAGNMRSRM 628
L A S GRW + RM
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRM 286
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 249/373 (66%), Gaps = 2/373 (0%)
Query: 308 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP--QRDCV 365
++ Y + AR++F+ M ++V+ WN ++ GYG+ G++ +AR L +MMP R+ V
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
SW +ISGYA++G EA+ +F + + + T LS CAD+ +LELG++I V
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 426 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
G + NA++ MY K G+I +A DVFE + E++VV+W T+IAG A HG G +AL
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 545
+F M GV+P+++T + +LSACSH G +D G F SM Y + P+ +HY CMIDL
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 546 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY 605
LGRAG+L EA +++++MPF+ AA WG+LL AS +H + ELGE+A + K+EP+NSG Y
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNY 456
Query: 606 VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIY 665
+LL+NLY+ GRW ++ MR+ M+ +GV+K+ G S +EV+N+++KF GD HP+ +RI+
Sbjct: 457 MLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIH 516
Query: 666 AFLEELDLKMRRE 678
L+E+DL+++ +
Sbjct: 517 EILQEMDLQIQSK 529
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 146/285 (51%), Gaps = 27/285 (9%)
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH--KNAISWNGLLAAYV 189
LGDAR++FD M KDV WNA+L+GY + G DEAR + MP +N +SW +++ Y
Sbjct: 167 LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYA 226
Query: 190 HNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKMLGAARKL---FDKMHVRDVVS 242
+GR EA +F + + ++ ++ L ++ D + VS
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVS 286
Query: 243 W-NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-- 299
N +I YA+ G++++A ++F+ ++V TWT +++G +G EA F++M +
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 300 --KNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQA 352
N++++ A+++ +D+ + LF +M S+ N+ + MI G+ G + +A
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 353 RKLFDMMP-QRDCVSWAAIISGYAQTGHY-----EEALNMFIEIK 391
++ MP + + W ++++ A H+ E AL+ I+++
Sbjct: 407 DEVIKSMPFKANAAIWGSLLA--ASNVHHDLELGERALSELIKLE 449
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 56/291 (19%)
Query: 246 MISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP--QKNEI 303
+I Y G + A+ +FD+ +DV W A+++GY + G +DEAR+ + MP +NE+
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMP---------------------------------- 329
S+ +++GY +S + A E+F+ M
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 330 -----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 384
+R VS N +I Y ++G+I +A +F+ + +R+ V+W II+G A GH EAL
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV-VKTGYET-----GCFVGN 438
MF + + G N TF LS C+ + ++LGK++ + K G GC +
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID- 395
Query: 439 ALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG---FGKQAL 485
LLG + G + EA++V + + K + W +++A H G++AL
Sbjct: 396 -LLG---RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 154/317 (48%), Gaps = 25/317 (7%)
Query: 91 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKDVV 148
+I Y AR +FD+M +D+ WN +L GY + + +AR L + MP ++ V
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRI---EEACRLF 201
SW ++SGYA++G A EA EVF +M +N ++ +L+A G + E C
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 202 DSKSDWELISW-NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 260
D + +S N ++ + K + A +F+ ++ R+VV+W T+I+G A G ++A
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 261 NLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAG 311
+F++ V T+ A++S G +D + F+ M K I Y M+
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 312 YVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARK----LFDMMPQRDCVS 366
++ K+ A E+ ++MP + N + W +++ + D+ + L + P + +
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN-NSGN 455
Query: 367 WAAIISGYAQTGHYEEA 383
+ + + Y+ G ++E+
Sbjct: 456 YMLLANLYSNLGRWDES 472
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 50/270 (18%)
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 460
TF L ++ + G+QIHGQVV G+++ V L+ MYF CG +G+A +F+ +
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 461 EEKDV---------------------------------VSWNTMIAGYARHGFGKQALMV 487
KDV VSW +I+GYA+ G +A+ V
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 488 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
F+ M V+PDE+T++ VLSAC+ G ++ G E S + + +ID+
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELG-ERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM-----EPHNS 602
++G + +A D+ + E +W ++ HG+ G +A M +M P++
Sbjct: 297 KSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGH---GAEALAMFNRMVKAGVRPNDV 352
Query: 603 GMYVLLSNLYAASGRWADAG-----NMRSR 627
+LS W D G +MRS+
Sbjct: 353 TFIAILSACSHVG--WVDLGKRLFNSMRSK 380
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 298/547 (54%), Gaps = 19/547 (3%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 205
DV A + + + D A +VF +MP ++A +WN +L+ + +G ++A LF
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFDKMH---VR-----DVVSWNTMISGYAQDGDMS 257
E+ + + ++ + KL + MH +R V NT IS Y + GD+
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 258 QAKNLFDQSPHQD--VFTWTAMVSGYVQNGMLDEARTFFDQMPQ---KNEISYNAMVAGY 312
AK +F+ D V +W +M Y G +A + M + K ++S +A
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 313 VQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 367
Q+ + L + +++ + NT I+ Y ++ D AR LFD+M R CVSW
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
+ISGYA+ G +EAL +F + + GE + T +S C +LE GK I +
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI 385
Query: 428 TGYE-TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 486
G + + NAL+ MY KCGSI EA D+F+ EK VV+W TMIAGYA +G +AL
Sbjct: 386 YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALK 445
Query: 487 VFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
+F M + KP+ IT + VL AC+H+G +++G EYF+ M + Y+++P HY+CM+DLL
Sbjct: 446 LFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLL 505
Query: 547 GRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV 606
GR G+LEEA +L+RNM +P A WGALL A +IH N ++ E+AAE +F +EP + YV
Sbjct: 506 GRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYV 565
Query: 607 LLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYA 666
++N+YAA+G W +RS M+ ++K G S ++V K H FTVG+ H E + IY
Sbjct: 566 EMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYF 625
Query: 667 FLEELDL 673
L L L
Sbjct: 626 TLNGLSL 632
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 181/400 (45%), Gaps = 30/400 (7%)
Query: 49 VKDP---DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLAR 105
+K P D+ + ++ D A +VF MP R + ++NAM+SG+ ++ A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 106 DLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM--------PQKDVVSWNAMLSGY 157
LF +M ++ +V + +++ + +L ++M V N +S Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 158 AQNGYADEAREVFYQMPH--KNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDWELIS 211
+ G D A+ VF + + +SWN + AY G +A C + + +L +
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 212 WNCLMGGFVKRKMLGAARKLFD-KMHV---RDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
+ L + L R + +H+ +D+ + NT IS Y++ D A+ LFD
Sbjct: 259 FINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT 318
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE----ISYNAMVA-----GYVQSNKM 318
+ +WT M+SGY + G +DEA F M + E ++ ++++ G +++ K
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 319 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 378
AR NV N +I Y + G I +AR +FD P++ V+W +I+GYA G
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 379 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
+ EAL +F ++ N TF L CA +LE G
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 160/372 (43%), Gaps = 72/372 (19%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPR--RSSVSYNAMISGYLRNARFSLARDLF------- 108
N IST+ + G DSA VF + R R+ VS+N+M Y + F A D F
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY---SVFGEAFDAFGLYCLML 248
Query: 109 ---------------------DKMPQ--------------RDLVSWNVMLTGYVRNRRLG 133
+ + Q +D+ + N ++ Y ++
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYV 189
AR LFD M + VSW M+SGYA+ G DEA +F+ M + ++ L++
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 190 HNGRIEEACRLFDSKSDW------ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 243
G +E + D+++D ++ N L+ + K + AR +FD + VV+W
Sbjct: 369 KFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
TMI+GYA +G +A LF + D T+ A++ +G L++ +F M Q
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 300 KNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITG--YGQNGDIAQ 351
IS Y+ MV + K++ A EL M ++ + W ++ +N IA+
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 352 --ARKLFDMMPQ 361
A LF++ PQ
Sbjct: 548 QAAESLFNLEPQ 559
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
E+L +F E+KR G N TF CA +A + + +H ++K+ + + FVG A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
M+ KC S+ A VFE + E+D +WN M++G+ + G +A +F M+ + PD +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T++ ++ + S + + E +++ V I G+ G L+ A+ +
Sbjct: 155 TVMTLIQSASFEKSL-KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 562 MPF-EPPAASWGALLGASRIHG 582
+ + SW ++ A + G
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFG 235
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 335 bits (858), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 323/629 (51%), Gaps = 34/629 (5%)
Query: 82 RRSSVSYNAMISGYLRNARFSLARD----LFDKMPQRDLVSWNVMLTGYVRNR-----RL 132
R +++N+ S L N SL L K Q ++ ++L + +R L
Sbjct: 38 RDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCAL 97
Query: 133 GDAR------RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA 186
++R ++ + ++ SWN + G++++ E+ ++ QM
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 157
Query: 187 AYVHNGRIEEACRLFDS---------KSDWELISW--NCLMGGFVKRKMLGAARKLFDKM 235
Y ++ RL K EL+S N + F + ARK+FD+
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 236 HVRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 291
VRD+VSWN +I+GY + G+ +A K + + D T +VS G L+ +
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 292 TFFDQMPQ---KNEISY-NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNG 347
F++ + + + I NA++ + + + AR +F+ + R + SW TMI+GY + G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 348 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
+ +RKLFD M ++D V W A+I G Q ++AL +F E++ + T LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
C+ + AL++G IH + K +G +L+ MY KCG+I EA VF GI+ ++ ++
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 468 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 527
+ +I G A HG A+ F M G+ PDEIT +G+LSAC H G+I G +YF M
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 528 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
+++ P KHY+ M+DLLGRAG LEEA LM +MP E AA WGALL R+HGN ELG
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 588 EKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNK 647
EKAA+ + +++P +SG+YVLL +Y + W DA R M + GV+K+ G S +EV
Sbjct: 578 EKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
Query: 648 IHKFTVGDCFHPEKDRIYAFLEELDLKMR 676
+ +F V D PE ++IY L L MR
Sbjct: 638 VCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 205/467 (43%), Gaps = 84/467 (17%)
Query: 173 MPH--KNAISWNGLLAAYVHNGRIE--EACRLFD--SKSDWELISWNCLMGGFVKRKM-- 224
+PH I+WN + +HN + E C+L + ++I ++ F ++
Sbjct: 34 LPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIA 93
Query: 225 ---------LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-------SPH 268
L + K+ + ++ SWN I G+++ + ++ L+ Q
Sbjct: 94 FCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESR 153
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM 328
D FT+ + F S M+ G+V ++++ +
Sbjct: 154 PDHFTYPVL----------------FKVCADLRLSSLGHMILGHVLKLRLELVSHVH--- 194
Query: 329 PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 388
N I + GD+ ARK+FD P RD VSW +I+GY + G E+A+ ++
Sbjct: 195 --------NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 389 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
++ +G + T +S+C+ + L GK+ + V + G + NAL+ M+ KCG
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 449 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGF---------------------------- 480
I EA +F+ +E++ +VSW TMI+GYAR G
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 481 ---GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
G+ AL +F+ M+T KPDEITM+ LSACS G +D G + + + YS++ +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVA 425
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 584
T ++D+ + G + EA + + + ++ A++G +HG+
Sbjct: 426 LGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDA 471
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 214/475 (45%), Gaps = 59/475 (12%)
Query: 49 VKDPDLLKWNKVI----------------STHMRNGHCDSALRVFNTMP---------RR 83
+++P++ WN I +R+G C+S F T P R
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF-TYPVLFKVCADLRL 171
Query: 84 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP 143
SS+ + MI G++ R L + N + + + +AR++FD P
Sbjct: 172 SSLGH--MILGHVLKLRLELVSHVH-----------NASIHMFASCGDMENARKVFDESP 218
Query: 144 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACR 199
+D+VSWN +++GY + G A++A V+ M + ++ GL+++ G +
Sbjct: 219 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
Query: 200 LFDSKSD----WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
++ + + N LM F K + AR++FD + R +VSW TMISGYA+ G
Sbjct: 279 FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGL 338
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----EISYNAMVAG 311
+ ++ LFD +DV W AM+ G VQ +A F +M N EI+ ++
Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 312 YVQSNKMDMA----RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 367
Q +D+ R + + S NV+ +++ Y + G+I++A +F + R+ +++
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
AII G A G A++ F E+ G + + TF LS C ++ G+ Q +K
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ-MK 517
Query: 428 TGYETGCFVG--NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 479
+ + + + ++ + + G + EA+ + E + E D W ++ G HG
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 333 bits (854), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 308/562 (54%), Gaps = 25/562 (4%)
Query: 147 VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL------ 200
+V WN++LS YA+ G +A ++F +MP ++ IS N + ++ N E L
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 201 ---FDSKSDWELISWNCLMGGF-VKRKMLGAARKL--FDKMHVRDVVSWNTMISGYAQDG 254
FD + ++S C F + KM+ A L +DK ++ N +I+ Y + G
Sbjct: 150 SGGFDHATLTIVLSV-CDTPEFCLVTKMIHALAILSGYDK----EISVGNKLITSYFKCG 204
Query: 255 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVA 310
+ +FD H++V T TA++SG ++N + ++ F M + N ++Y + +A
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 311 GYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGDIAQARKLFDMMPQRDCVS 366
S ++ +++ + + S + ++ Y + G I A +F+ + D VS
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
I+ G AQ G EEA+ FI + + G ++ + S L +L LGKQ+H V+
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVI 384
Query: 427 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 486
K + FV N L+ MY KCG + ++ VF + +++ VSWN+MIA +ARHG G AL
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 487 VFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
++E M T+ VKP ++T + +L ACSH GLID+G E M + + + P ++HYTC+ID+L
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 547 GRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV 606
GRAG L+EA+ + ++P +P W ALLGA HG+TE+GE AAE +F+ P +S ++
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 607 LLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYA 666
L++N+Y++ G+W + RM+ +GV K TG S +E+++K H F V D HP+ + IY
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYD 624
Query: 667 FLEELDLKMRREGYVSSTKLVL 688
L L M EGY + +L
Sbjct: 625 VLSGLFPVMVDEGYRPDKRFIL 646
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 185/391 (47%), Gaps = 16/391 (4%)
Query: 235 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
+H +V WN+++S YA+ G + A LFD+ P +DV + + G+++N +
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 295 DQMPQKNEISYNAM--VAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNG 347
+M + + V + + + ++ A+ + +S N +IT Y + G
Sbjct: 145 KRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCG 204
Query: 348 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
R +FD M R+ ++ A+ISG + +E+ L +F ++R N T+ AL+
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
C+ + G+QIH + K G E+ + +AL+ MY KCGSI +A +FE E D VS
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 468 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT---EYFY 524
++ G A++G ++A+ F M GV+ D V+SA ID + +
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEID----ANVVSAVLGVSFIDNSLGLGKQLH 380
Query: 525 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 584
S+ + ++ +I++ + G L ++Q + R MP + SW +++ A HG+
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHG 439
Query: 585 ELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
K E + +E + + LS L+A S
Sbjct: 440 LAALKLYEEMTTLEVKPTDV-TFLSLLHACS 469
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 165/361 (45%), Gaps = 34/361 (9%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D ++ NK+I+++ + G S VF+ M R+ ++ A+ISG + N LF
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 111 MPQRDLVSWNVM-----LTGYVRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQNG 161
M +R LV N + L ++R+ + +++ + + ++ +A++ Y++ G
Sbjct: 247 M-RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 162 YADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF------DSKSDWELISWNCL 215
++A +F + +S +L NG EEA + F + D ++S +
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS--AV 363
Query: 216 MGGFVKRKMLGAARKLFDKMHVRDVVSWNT-----MISGYAQDGDMSQAKNLFDQSPHQD 270
+G LG ++L + ++ S NT +I+ Y++ GD++ ++ +F + P ++
Sbjct: 364 LGVSFIDNSLGLGKQL-HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFE 326
+W +M++ + ++G A +++M + ++++ +++ +D REL
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLN 482
Query: 327 AMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHY 380
M + + +I G+ G + +A+ D +P + DC W A++ + G
Sbjct: 483 EMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDT 542
Query: 381 E 381
E
Sbjct: 543 E 543
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----H 175
N ++ Y + L D++ +F MP+++ VSWN+M++ +A++G+ A +++ +M
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 176 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARK 230
+++ LL A H G I++ L + + I + C++ + +L A+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 231 LFDKMHVR-DVVSWNTMISGYAQDGDMS----QAKNLFDQSP 267
D + ++ D W ++ + GD A+ LF +P
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 311/616 (50%), Gaps = 56/616 (9%)
Query: 116 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 175
LV + ++ R+ AR++FD MP+ D V+WN ML+ Y++ G EA +F Q+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 176 KNA----ISWNGLLAAYVHNGRIEEACRL----FDSKSDWELISWNCLMGGFVKRKMLGA 227
+A S+ +L+ G ++ ++ S L N L+ + K +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 228 ARKLFDKMHV--RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 285
A K+F M R+ V+W +++ Y A ++F + P + F W M+SG+ G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 286 MLDEARTFFDQMPQK--------------------NEISYNAMVAGYVQSN--------- 316
L+ + F +M + + + Y MV + N
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 317 ------------KMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+ D REL E++ SWN++I + G+ +A ++F + P+++
Sbjct: 244 NSVLSFYTKLGSRDDAMREL-ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI 302
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
V+W +I+GY + G E+AL F+E+ + G + + L C+ +A L GK IHG
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
++ G++ +VGNAL+ +Y KCG I EA+ F I KD+VSWNTM+ + HG QA
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
L ++++M G+KPD +T +G+L+ CSH+GL++ G F SM KDY + H TCMID
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMID 482
Query: 545 LLGRAGRLEEAQDLMRN----MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
+ GR G L EA+DL + +SW LLGA H +TELG + ++++ EP
Sbjct: 483 MFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPS 542
Query: 601 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPE 660
+VLLSNLY ++GRW + ++R M + G++K G SW+EV N++ F VGD HP
Sbjct: 543 EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Query: 661 KDRIYAFLEELDLKMR 676
+ + L L +MR
Sbjct: 603 LEELSETLNCLQHEMR 618
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 165/362 (45%), Gaps = 29/362 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTM--PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD 115
N +I + + SA +VF M R+ V++ +++ Y+ +F A D+F +MP+R
Sbjct: 109 NSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 116 LVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH 175
+WN+M++G+ +L LF M + + S AD + V+ +M H
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 176 ----KNAISW-----NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 226
KN S N +L+ Y G ++A R +S +SWN ++ +K +G
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK---IG 285
Query: 227 AARKLFDKMHV---RDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVS 279
K + H+ +++V+W TMI+GY ++GD QA F D F + A++
Sbjct: 286 ETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 345
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKMDMARELFEAMPSRNVSS 335
+L + + Y NA+V Y + + A F + ++++ S
Sbjct: 346 ACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS 405
Query: 336 WNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
WNTM+ +G +G QA KL+D M + D V++ +++ + +G EE +F +
Sbjct: 406 WNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMV 465
Query: 392 RD 393
+D
Sbjct: 466 KD 467
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 150/358 (41%), Gaps = 57/358 (15%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR 114
+ W ++ +M ++AL VF MP+R + ++N MISG+ + LF +M +
Sbjct: 139 VTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLES 198
Query: 115 DLV---------------------------------SW-------NVMLTGYVRNRRLGD 134
+ W N +L+ Y + D
Sbjct: 199 EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDD 258
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
A R +S+ VSWN+++ + G ++A EVF+ P KN ++W ++ Y NG
Sbjct: 259 AMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 195 EEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW----NTM 246
E+A R F S D + ++ ++ +LG + + + + N +
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 247 ISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNE 302
++ YA+ GD+ +A F ++D+ +W M+ + +G+ D+A +D M + +
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 303 ISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKL 355
+++ ++ S ++ +FE+M V MI +G+ G +A+A+ L
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 156/389 (40%), Gaps = 57/389 (14%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N V+S + + G D A+R ++ + VS+N++I ++ A ++F P++++V
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAML---SGYAQNGYADEAREVF 170
+W M+TGY RN A R F M + V S + A+L SG A G+
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 171 YQMPHKN-AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
+ A N L+ Y G I+EA R F ++ +L+SWN ++ F + A
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQAL 423
Query: 230 KLFDKMHVRDVVSWNTMI---------SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
KL+D M + N SG ++G M + D +V T M+
Sbjct: 424 KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDM 483
Query: 281 YVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 340
+ + G L EA+ +Y+++V S N SSW T++
Sbjct: 484 FGRGGHLAEAKDL--------ATTYSSLVT------------------DSSNNSSWETLL 517
Query: 341 TGYGQNGDIAQAR---KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+ R K+ + + +S+ + + Y TG ++E GE +
Sbjct: 518 GACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKE-----------GEDV 566
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVV 426
R + + +E+G Q+ VV
Sbjct: 567 RREMVERGMKKTPGCSWIEVGNQVSTFVV 595
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+ +++ W +I+ + RNG + ALR F M +S V + G + +A LA K
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEM-MKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 111 MPQRDLVSW---------NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG 161
M L+ N ++ Y + + +A R F + KD+VSWN ML + +G
Sbjct: 358 MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG 417
Query: 162 YADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDS-----KSDWELISW 212
AD+A +++ M + +++ GLL H+G +EE C +F+S + E+
Sbjct: 418 LADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV 477
Query: 213 NCLMGGFVKRKMLGAARKL 231
C++ F + L A+ L
Sbjct: 478 TCMIDMFGRGGHLAEAKDL 496
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 221/674 (32%), Positives = 353/674 (52%), Gaps = 69/674 (10%)
Query: 145 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSK 204
++V+ N +++ YA+ G AR+VF MP +N +SW L+ YV G +E LF S
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS- 152
Query: 205 SDWELISWNCLMGGFVKRKMLGAAR----------KLFDKMHVRDVVSWNTMISGYAQ-- 252
++S +C F +L + R L +H V+ N +IS Y +
Sbjct: 153 ----MLS-HCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVA-NAVISMYGRCH 206
Query: 253 DGDMS-QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG 311
DG + +A +F+ +++ TW +M++ + + +A F +M G
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG--------VG 258
Query: 312 YVQSNKMDMARELFEA--MPSRNVSSWN------TMITGYGQNGDIAQA----------- 352
+ ++ +++ L+++ + VS T+ +G ++A A
Sbjct: 259 FDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLED 318
Query: 353 ----RKLF-DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
KLF +M RD V+W II+ +A E A+++F +++++ S + TFS L
Sbjct: 319 YTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVLK 377
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
CA + IH QV+K G+ + N+L+ Y KCGS+ VF+ ++ +DVVS
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS 437
Query: 468 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN 527
WN+M+ Y+ HG L VF+ M + PD T + +LSACSHAG ++ G F SM
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 528 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
+ P HY C+ID+L RA R EA+++++ MP +P A W ALLG+ R HGNT LG
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 588 EKAAEMVFKM-EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 646
+ AA+ + ++ EP NS Y+ +SN+Y A G + +A M V+K SW E+ N
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGN 614
Query: 647 KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHM-LKYHSE 705
K+H+F G P+K+ +Y L+ L ++ GYV + D+E+EE+E L +HSE
Sbjct: 615 KVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSE 674
Query: 706 KLAVAFGILTIPAGRP--------IRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRF 757
KLA+AF ++ GR I+++KN R+C DCHN +K SK++G+ I++RDS+RF
Sbjct: 675 KLALAFAVME---GRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRF 731
Query: 758 HHFNEGICSCGDYW 771
HHF + CSC DYW
Sbjct: 732 HHFKDSSCSCNDYW 745
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
S+NV N +I Y + G+I AR++FD MP+R+ VSW A+I+GY Q G+ +E +F
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC-- 447
+ N T S L++C E GKQ+HG +K G +V NA++ MY +C
Sbjct: 153 MLSHCFP-NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 448 -GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
+ EA VFE I+ K++V+WN+MIA + GK+A+ VF M + GV D T++ +
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 507 LSA 509
S+
Sbjct: 268 CSS 270
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 212/511 (41%), Gaps = 104/511 (20%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 142
N +I+ Y + AR +FD MP+R++VSW ++TGYV+ + LF SM
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP 159
Query: 143 ---------------PQKDVVSW-------------NAMLSGYAQ---NGYADEAREVFY 171
P K V NA++S Y + A EA VF
Sbjct: 160 NEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFE 219
Query: 172 QMPHKNAISWNGLLAAY---------------VHN-------GRIEEACRLFDSKSDW-- 207
+ KN ++WN ++AA+ +H+ + C SD
Sbjct: 220 AIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVP 279
Query: 208 ELISWNCLM-------GGFVKRKMLGAA---------------RKLFDKM-HVRDVVSWN 244
+S CL G V + + A KLF +M H RD+V+WN
Sbjct: 280 NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWN 339
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ- 299
+I+ +A D +A +LF Q + D +T+++++ A + Q+ +
Sbjct: 340 GIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG 398
Query: 300 ---KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 356
+ + N+++ Y + +D+ +F+ M SR+V SWN+M+ Y +G + +F
Sbjct: 399 GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 357 DMMP-QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR-STFSCALSTCADIAA 414
M D ++ A++S + G EE L +F + E+L + + ++C + +
Sbjct: 459 QKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAER 518
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS--IGE--ANDVFEGIEEKDVVSWNT 470
+++ Q+ + V ALLG K G+ +G+ A+ + E +E + +S+
Sbjct: 519 FAEAEEVIKQM---PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVK--PD 499
M Y G +A + + M+T V+ PD
Sbjct: 576 MSNIYNAEGSFNEANLSIKEMETWRVRKEPD 606
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK--TGYETG 433
++G A+++F + +S + ++ CA+ L G +H ++ Y
Sbjct: 38 RSGDIRRAVSLFYSAPVELQS--QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
+ N L+ MY KCG+I A VF+ + E++VVSW +I GY + G ++ +F SM +
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 494 IGVKPDEITMVGVLSACSH 512
P+E T+ VL++C +
Sbjct: 156 -HCFPNEFTLSSVLTSCRY 173
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 325/618 (52%), Gaps = 38/618 (6%)
Query: 63 THMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM--------PQR 114
T+ GH A ++F MP+ S +SYN +I Y+R + A +F +M P
Sbjct: 58 TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 117
Query: 115 DLVSWNVMLTGYVRNRRLGDAR--RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
+ G +++ +LG R+ S +D NA+L+ Y G + AR+VF
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW-----------ELISWNCLMGGFVK 221
M +++ ISWN +++ Y NG + +A +F DW ++S + G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMF----DWMVNESVDLDHATIVSMLPVCGHLKD 233
Query: 222 RKMLGAARKLFDKMHVRDVVSW-NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
+M KL ++ + D + N +++ Y + G M +A+ +FD+ +DV TWT M++G
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 281 YVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS- 335
Y ++G ++ A M + N ++ ++V+ + K++ + L + V S
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD 353
Query: 336 ---WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 392
++I+ Y + + ++F + W+AII+G Q +AL +F ++R
Sbjct: 354 IIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
+ N +T + L A +A L IH + KTG+ + L+ +Y KCG++
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 453 ANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
A+ +F GI+EK DVV W +I+GY HG G AL VF M GV P+EIT L+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 509 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 568
ACSH+GL++ G F M + Y S HYTC++DLLGRAGRL+EA +L+ +PFEP +
Sbjct: 534 ACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS 593
Query: 569 ASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
WGALL A H N +LGE AA +F++EP N+G YVLL+N+YAA GRW D +RS M
Sbjct: 594 TVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMM 653
Query: 629 RDVGVQKVTGYSWVEVQN 646
+VG++K G+S +E+++
Sbjct: 654 ENVGLRKKPGHSTIEIRS 671
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 204/469 (43%), Gaps = 62/469 (13%)
Query: 184 LLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM-------- 235
L Y G I A +LF+ L+S+N ++ +V+ + A +F +M
Sbjct: 55 LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV 114
Query: 236 -------------------------HVRDVVSW--------NTMISGYAQDGDMSQAKNL 262
H R + SW N +++ Y G + A+++
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN------EISYNAMVAGYVQSN 316
FD ++DV +W M+SGY +NG +++A FD M ++ I V G+++
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD- 233
Query: 317 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
++M R + + + + + N ++ Y + G + +AR +FD M +RD ++W +I+
Sbjct: 234 -LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 432
GY + G E AL + ++ +G N T + +S C D + GK +HG V+ +
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 492
+ +L+ MY KC + VF G + W+ +IAG ++ AL +F+ M+
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR 412
Query: 493 TIGVKPDEITMVGVLSACSHAGLID-RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 551
V+P+ T+ +L A +A L D R + S T ++ + + G
Sbjct: 413 REDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 552 LEEAQDLMRNMPFEPPAAS---WGALLGASRIHGNTELGEKAAEMVFKM 597
LE A + + + + WGAL+ +HG+ G A ++ +M
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD---GHNALQVFMEM 516
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 210/473 (44%), Gaps = 74/473 (15%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR--D 115
N +++ +M G + A VF+ M R +S+N MISGY RN + A +FD M D
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 116 LVSWNVM----LTGYVRNRRLG-------DARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
L ++ + G++++ +G + +RL D + K NA+++ Y + G D
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK-----NALVNMYLKCGRMD 270
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIE---EACRLF-------DSKSDWELISW-- 212
EAR VF +M ++ I+W ++ Y +G +E E CRL ++ + L+S
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 213 --------NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD 264
CL G V++++ D++ ++IS YA+ + +F
Sbjct: 331 DALKVNDGKCLHGWAVRQQVYS------------DIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 265 QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDM 320
+ W+A+++G VQN ++ +A F +M ++ N + N+++ Y +
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 321 ARELFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQ----RDCVSWAAIIS 372
A + + S TG Y + G + A K+F+ + + +D V W A+IS
Sbjct: 439 AMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI------HGQVV 426
GY G AL +F+E+ R G + N TF+ AL+ C+ +E G + H + +
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 427 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARH 478
C V LLG + G + EA ++ I E W ++A H
Sbjct: 559 ARSNHYTCIVD--LLG---RAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 72/317 (22%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ---- 299
+T+ YA G ++ A+ LF++ P + ++ ++ YV+ G+ +A + F +M
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 300 -------------------------------------KNEISYNAMVAGYVQSNKMDMAR 322
+++ NA++A Y+ K++MAR
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 323 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
++F+ M +R+V SWNTMI+GY +NG + A +FD M
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN--------------------- 211
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
+ L+ +T L C + LE+G+ +H V + V NAL+
Sbjct: 212 ----------ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
MY KCG + EA VF+ +E +DV++W MI GY G + AL + M+ GV+P+ +T
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 503 MVGVLSACSHAGLIDRG 519
+ ++S C A ++ G
Sbjct: 322 IASLVSVCGDALKVNDG 338
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 11/266 (4%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
+T+ Y G I ARKLF+ MPQ +S+ +I Y + G Y +A+++FI + +G
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 397 L--NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ T+ ++ +++LG +HG+++++ + +V NALL MY G + A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
DVF+ ++ +DV+SWNTMI+GY R+G+ ALM+F+ M V D T+V +L C H
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
++ G + + ++ + + ++++ + GR++EA+ + M +W +
Sbjct: 233 DLEMGRN-VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCM 290
Query: 575 LGASRIHGNTELG--EKAAEMVFKME 598
I+G TE G E A E+ M+
Sbjct: 291 -----INGYTEDGDVENALELCRLMQ 311
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 281/516 (54%), Gaps = 13/516 (2%)
Query: 182 NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV 241
N + A R++ A + + +N L GFV + +L+ +M +RD V
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM-LRDSV 867
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW---------TAMVSGYVQNGMLDEART 292
S ++ Y+ S + F +S ++ + T ++ Y G + EAR
Sbjct: 868 SPSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARK 925
Query: 293 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA 352
FD+MP++++I++ MV+ Y + MD A L M +N ++ N +I GY G++ QA
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
LF+ MP +D +SW +I GY+Q Y EA+ +F ++ +G + T S +S CA +
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 413 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 472
LE+GK++H ++ G+ ++G+AL+ MY KCGS+ A VF + +K++ WN++I
Sbjct: 1046 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSII 1105
Query: 473 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 532
G A HGF ++AL +F M+ VKP+ +T V V +AC+HAGL+D G + SM DYS+
Sbjct: 1106 EGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSI 1165
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
+ +HY M+ L +AG + EA +L+ NM FEP A WGALL RIH N + E A
Sbjct: 1166 VSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFN 1225
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV-TGYSWVEVQNKIHKF 651
+ +EP NSG Y LL ++YA RW D +R RMR++G++K+ G S + + + H F
Sbjct: 1226 KLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLF 1285
Query: 652 TVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLV 687
D H D + L+E+ +M GYV T+ V
Sbjct: 1286 AAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 194/433 (44%), Gaps = 65/433 (15%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PH 175
N +T +RL A M + +V +NA+ G+ + + E++ +M
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 176 KNAISWNGLLAA---------------------------------YVHNGRIEEACRLFD 202
++ +++ L+ A Y GRI EA ++FD
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD 928
Query: 203 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 262
+ + I+W ++ + + + +A L ++M ++ + N +I+GY G++ QA++L
Sbjct: 929 EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
F+Q P +D+ +WT M+ GY QN EA F +M ++ +E++ + +++ +
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 319 DMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
++ +E+ + +V + ++ Y + G + +A +F +P+++ W +II G
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
A G +EAL MF +++ + N TF + C ++ G++I+ ++ +
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI----DDYS 1164
Query: 435 FVGNA-----LLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARH--------GF 480
V N ++ ++ K G I EA ++ +E E + V W ++ G H F
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAF 1224
Query: 481 GKQALMVFESMKT 493
K LMV E M +
Sbjct: 1225 NK--LMVLEPMNS 1235
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 146/324 (45%), Gaps = 33/324 (10%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
+I + G A +VF+ MP R +++ M+S Y R A L ++M +++ +
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
N ++ GY+ L A LF+ MP KD++SW M+ GY+QN EA VFY+M +
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE--- 1026
Query: 180 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
G++ V + AC + + L GFV +G+A
Sbjct: 1027 ---GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSA----------- 1072
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP- 298
++ Y++ G + +A +F P +++F W +++ G +G EA F +M
Sbjct: 1073 ------LVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEM 1126
Query: 299 ---QKNEISYNAMVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIA 350
+ N +++ ++ + +D R ++ +M NV + M+ + + G I
Sbjct: 1127 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 1186
Query: 351 QARKLF-DMMPQRDCVSWAAIISG 373
+A +L +M + + V W A++ G
Sbjct: 1187 EALELIGNMEFEPNAVIWGALLDG 1210
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 18/282 (6%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + D + W ++S + R DSA + N M ++ + N +I+GY+ A L
Sbjct: 929 EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYA 163
F++MP +D++SW M+ GY +N+R +A +F M ++ D V+ + ++S A G
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 164 DEAREV-FYQMPHKNAISW---NGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF 219
+ +EV Y + + + + L+ Y G +E A +F + L WN ++ G
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 220 VKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLF-----DQSPHQD 270
A K+F KM + V V++ ++ + G + + + ++ D S +
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN 1168
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAG 311
V + MV + + G++ EA M + N + + A++ G
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 328 bits (841), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 328/647 (50%), Gaps = 64/647 (9%)
Query: 94 GYLRNARFSL-ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 152
G+ R S+ AR +F +M +R L WN +L R ++ + F M + + N
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 153 MLSGYAQNGYADEAREVFY-QMPH---KNAISW-------NGLLAAYVHNGRIEEACRLF 201
L + E REV Y +M H K ++ + L+ Y+ GR+ EA R+F
Sbjct: 62 TLPVALKA--CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF 119
Query: 202 DSKSDWELISWNCLMGGFVK-----------RKMLGAARKLFDKMHVRDVVS-------- 242
D ++++W+ ++ GF K R+M+ A+ D++ + +VS
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 243 ---------------------WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 281
N++++ YA+ +A NLF +DV +W+ +++ Y
Sbjct: 180 RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACY 239
Query: 282 VQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NV 333
VQNG EA F+ M + N + ++ ++ ++ R+ E + V
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF-IEIKR 392
++ Y + +A +F +P++D VSW A+ISG+ G ++ F I +
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
+ + L +C+++ LE K H V+K G+++ F+G +L+ +Y +CGS+G
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 453 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACS 511
A+ VF GI KD V W ++I GY HG G +AL F M K+ VKP+E+T + +LSACS
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
HAGLI G F M DY + P+ +HY ++DLLGR G L+ A ++ + MPF P
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 572 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
G LLGA RIH N E+ E A+ +F++E +++G Y+L+SN+Y G W + +R+ ++
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQR 599
Query: 632 GVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 678
G++K S +E++ K+H+F D HPEK+ +Y L+ELDL M+ +
Sbjct: 600 GIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 185/410 (45%), Gaps = 45/410 (10%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM- 111
DL + +I +++ G ALR+F+ + + V++++M+SG+ +N A + F +M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 112 ------PQRDLVSWNVMLTGYVRNRRLGDA------RRLFDSMPQKDVVSWNAMLSGYAQ 159
P R + V + N RLG RR F + D+ N++L+ YA+
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN----DLSLVNSLLNCYAK 210
Query: 160 NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCL 215
+ EA +F + K+ ISW+ ++A YV NG EA +F D ++ + + C+
Sbjct: 211 SRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCV 270
Query: 216 MGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 270
+ L RK + + +R +V ++ Y + +A +F + P +D
Sbjct: 271 LQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD 329
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV----------AGYVQSNKMDM 320
V +W A++SG+ NGM + F M +N +A++ G+++ K
Sbjct: 330 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFH 389
Query: 321 AREL---FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
+ + F++ P S ++ Y + G + A K+F+ + +D V W ++I+GY
Sbjct: 390 SYVIKYGFDSNPFIGAS----LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445
Query: 378 GHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVV 426
G +AL F + + E N TF LS C+ + G +I +V
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 168/371 (45%), Gaps = 31/371 (8%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYN-----AMISGYLRNARFS 102
+++ PD++ W+ ++S +NG A+ F M S V+ + ++S + +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 103 LARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
L R + + +R DL N +L Y ++R +A LF + +KDV+SW+ +++ Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 159 QNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELI 210
QNG A EA VF M N + +L A +E+ + + + E+
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN-----LFDQ 265
L+ ++K A +F ++ +DVVSW +ISG+ +G ++ L +
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMA 321
+ D ++ + G L++A+ F + + N ++V Y + + A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-----DCVSWAAIISGYAQ 376
++F + ++ W ++ITGYG +G +A + F+ M + + V++ +I+S +
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 377 TGHYEEALNMF 387
G E L +F
Sbjct: 481 AGLIHEGLRIF 491
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 314/607 (51%), Gaps = 64/607 (10%)
Query: 94 GYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVS 149
GY ++AR +FD++P+ D W VML Y N+ + +L+D + + D +
Sbjct: 90 GYTKDARL-----VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 150 WNAMLSGYAQNGYADEAREVFYQM---PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD 206
++ L + D +++ Q+ P + + GLL Y G I+ A ++F+ +
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL 204
Query: 207 WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV----SWNTMI--------------- 247
++ W ++ G+VK + LF++M +V+ ++ T+I
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 248 ------SG--------------YAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 287
SG Y + GD+S A+ +F++ H D+ WTAM+ GY NG +
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 288 DEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT----- 338
+EA + F +M + N ++ ++++G +++ R + S V W+T
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL--SIKVGIWDTNVANA 382
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
++ Y + A+ +F+M ++D V+W +IISG++Q G EAL +F + + + N
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGY--ETGCFVGNALLGMYFKCGSIGEANDV 456
T + S CA + +L +G +H VK G+ + VG ALL Y KCG A +
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 516
F+ IEEK+ ++W+ MI GY + G +L +FE M KP+E T +LSAC H G++
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 517 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
+ G +YF SM KDY+ TPS+KHYTCM+D+L RAG LE+A D++ MP +P +GA L
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLH 622
Query: 577 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
+H +LGE + + + P ++ YVL+SNLYA+ GRW A +R+ M+ G+ K+
Sbjct: 623 GCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKI 682
Query: 637 TGYSWVE 643
G+S +E
Sbjct: 683 AGHSTME 689
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 240/489 (49%), Gaps = 34/489 (6%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 205
D+ ++S Y GY +AR VF Q+P + W +L Y N E +L+D
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDL-- 132
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFD-----KMHVR-------DVVSWNTMISGYAQD 253
L+ V K L A +L D K+H + D V ++ YA+
Sbjct: 133 ---LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKC 189
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMV 309
G++ A +F+ ++V WT+M++GYV+N + +E F++M + NE +Y ++
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 310 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCV 365
+ + + + + + + ++T Y + GDI+ AR++F+ D V
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
W A+I GY G EAL++F ++K N T + LS C I LELG+ +HG
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 426 VKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
+K G ++T V NAL+ MY KC +A VFE EKD+V+WN++I+G++++G +A
Sbjct: 370 IKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMI 543
L +F M + V P+ +T+ + SAC+ G + G+ + YS+ + + S T ++
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG--EKAAEMVFKME-PH 600
D + G + A+ L+ + E +W A++G G+T +G E EM+ K + P+
Sbjct: 488 DFYAKCGDPQSAR-LIFDTIEEKNTITWSAMIGGYGKQGDT-IGSLELFEEMLKKQQKPN 545
Query: 601 NSGMYVLLS 609
S +LS
Sbjct: 546 ESTFTSILS 554
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 189/442 (42%), Gaps = 69/442 (15%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
D+ +++ W +I+ +++N C+ L +FN M R ++V N G L A L+
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RENNVLGNEYTYGTLIMACTKLSALH 259
Query: 108 FDKMPQRDLVSWNVMLTG---------YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
K LV + L+ YV+ + +ARR+F+ D+V W AM+ GY
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 159 QNGYADEAREVFYQMP----HKNAISWNGLLA--AYVHNGRIEEACRLFDSKSD-WELIS 211
NG +EA +F +M N ++ +L+ + N + + K W+
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV 379
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------ 265
N L+ + K A+ +F+ +D+V+WN++ISG++Q+G + +A LF +
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 266 SPH-----------------------------------QDVFTWTAMVSGYVQNGMLDEA 290
+P+ V TA++ Y + G A
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 291 RTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQN 346
R FD + +KN I+++AM+ GY + + ELFE M + N S++ ++++ G
Sbjct: 500 RLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHT 559
Query: 347 GDIAQARKLFDMMPQR-----DCVSWAAIISGYAQTGHYEEALNMF--IEIKRDGESLNR 399
G + + +K F M + + ++ A+ G E+AL++ + I+ D
Sbjct: 560 GMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGA 619
Query: 400 STFSCALSTCADIAALELGKQI 421
C + + D+ + + K +
Sbjct: 620 FLHGCGMHSRFDLGEIVIKKML 641
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 121/303 (39%), Gaps = 46/303 (15%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+ D++ WN +IS +NG AL +F+ M SV+ N + L +A SL
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 111 -----------MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
+ + +L Y + AR +FD++ +K+ ++W+AM+ GY +
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGK 523
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 215
G + E+F +M K N ++ +L+A H G + E + F S
Sbjct: 524 QGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK--------- 574
Query: 216 MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-DVFTW 274
D + M+ A+ G++ QA ++ ++ P Q DV +
Sbjct: 575 -----------------DYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 275 TAMVSGYVQNGMLDEARTFFDQM--PQKNEISYNAMVAG-YVQSNKMDMARELFEAMPSR 331
A + G + D +M ++ SY +V+ Y + + A+E+ M R
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 332 NVS 334
+S
Sbjct: 678 GLS 680
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 93/221 (42%), Gaps = 16/221 (7%)
Query: 386 MFIEIKRDGESLNRSTFS---CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
+ + + DG SL+ + S LS C +I +L +Q HG + G + L+
Sbjct: 28 LILTEENDGSSLHYAASSPCFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVS 84
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+Y G +A VF+ I E D W M+ Y + + + +++ + G + D+I
Sbjct: 85 LYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH--YTCMIDLLGRAGRLEEAQDLMR 560
L AC+ +D G + + K PS + T ++D+ + G ++ A +
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 561 NMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHN 601
++ W +++ + +L E+ + +M +N
Sbjct: 201 DITLR-NVVCWTSMIAG---YVKNDLCEEGLVLFNRMRENN 237
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/462 (38%), Positives = 257/462 (55%), Gaps = 11/462 (2%)
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD--------QSPHQDVFTWTAMVS 279
ARKLFD +N +I Y ++ L++ S H F + A S
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 339
+ FF + + ++ Y + + AR +F+ M R+V WN M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLN 398
ITGY + GD+ A +LFD MP+++ SW +ISG++Q G+Y EAL MF+ +++D N
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
T L CA++ LE+G+++ G + G+ +V NA + MY KCG I A +FE
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 459 GI-EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
+ ++++ SWN+MI A HG +AL +F M G KPD +T VG+L AC H G++
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 577
+G E F SM + + ++P +HY CMIDLLGR G+L+EA DL++ MP +P A WG LLGA
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 578 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 637
HGN E+ E A+E +FK+EP N G V++SN+YAA+ +W MR M+ + K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 638 GYSW-VEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 678
GYS+ VEV +HKFTV D HP IY LEE+ +M+ E
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 169/356 (47%), Gaps = 44/356 (12%)
Query: 74 LRVFNTMPRRS-----SVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 128
LR+ ++ RS S +I+ Y + AR +FD+M +RD+ WN M+TGY R
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 129 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----G 183
+ A LFDSMP+K+V SW ++SG++QNG EA ++F M ++ N
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 184 LLAAYVHNGRIEEACRL---------FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 234
+L A + G +E RL FD+ + N + + K M+ A++LF++
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDN-----IYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 235 M-HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDE 289
+ + R++ SWN+MI A G +A LF Q + D T+ ++ V GM+ +
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 290 ARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGY 343
+ F M + ++IS Y M+ + K+ A +L + MP + + W T++
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 395
Query: 344 GQNGDIAQA----RKLFDMMPQR--DCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
+G++ A LF + P +CV + I YA ++ L M +K++
Sbjct: 396 SFHGNVEIAEIASEALFKLEPTNPGNCVIMSNI---YAANEKWDGVLRMRKLMKKE 448
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 51/259 (19%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ WN +I+ + R G +A+ +F++MPR++ S+ +ISG+ +N +S A +F M
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 113 QRDLVSWNVM--------------------LTGYVRNRRLGD------------------ 134
+ V N + L GY R D
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 135 --ARRLFDSM-PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAA 187
A+RLF+ + Q+++ SWN+M+ A +G DEA +F QM + +A+++ GLL A
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 188 YVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKMHVR-DVV 241
VH G + + LF S + IS + C++ + L A L M ++ D V
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 242 SWNTMISGYAQDGDMSQAK 260
W T++ + G++ A+
Sbjct: 387 VWGTLLGACSFHGNVEIAE 405
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 41/271 (15%)
Query: 348 DIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
++ ARKLFD + +I Y E++ ++ + DG + TF+ +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
A ++ + +H Q ++G+E+ F L+ Y K G++ A VF+ + ++DV
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 468 WNTMIAGYARHGFGKQALMVFESM--------------------------------KTIG 495
WN MI GY R G K A+ +F+SM K
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 496 VKPDEITMVGVLSACSHAGLID--RGTEYFYSMNKDYSVTPSSKHYTC--MIDLLGRAGR 551
VKP+ IT+V VL AC++ G ++ R E + N + Y C I++ + G
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNI-----YVCNATIEMYSKCGM 265
Query: 552 LEEAQDLMRNMPFEPPAASWGALLGASRIHG 582
++ A+ L + + SW +++G+ HG
Sbjct: 266 IDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 258/444 (58%), Gaps = 12/444 (2%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 303
N++ISGY+ G A LFD + +DV TWTAM+ G+V+NG EA +F +M +K +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM-KKTGV 200
Query: 304 SYNAMV-------AGYVQSNKMDMARELFEAMPSR---NVSSWNTMITGYGQNGDIAQAR 353
+ N M AG V+ + + R +V ++++ YG+ A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
K+FD MP R+ V+W A+I+GY Q+ +++ + +F E+ + + N T S LS CA +
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
AL G+++H ++K E G L+ +Y KCG + EA VFE + EK+V +W MI
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
G+A HG+ + A +F +M + V P+E+T + VLSAC+H GL++ G F SM +++
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
P + HY CM+DL GR G LEEA+ L+ MP EP WGAL G+ +H + ELG+ AA
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASR 500
Query: 594 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTV 653
V K++P +SG Y LL+NLY+ S W + +R +M+D V K G+SW+EV+ K+ +F
Sbjct: 501 VIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIA 560
Query: 654 GDCFHP-EKDRIYAFLEELDLKMR 676
D P E D +Y L+ + ++MR
Sbjct: 561 FDDKKPLESDDLYKTLDTVGVQMR 584
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 25/295 (8%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
N +++GY + A RLFD KDVV+W AM+ G+ +NG A EA F +M K +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK-KTGV 200
Query: 180 SWNGLLAAYVHN--GRIEEA--------CRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
+ N + V G++E+ L + ++ + L+ + K A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 230 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNG 285
K+FD+M R+VV+W +I+GY Q + +F++ DV T ++++S G
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 286 MLDEARTFFDQMPQKNEISYN-----AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMI 340
L R M KN I N ++ YV+ ++ A +FE + +NV +W MI
Sbjct: 321 ALHRGRRVHCYMI-KNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMI 379
Query: 341 TGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIK 391
G+ +G A LF M V++ A++S A G EE +F+ +K
Sbjct: 380 NGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 149/352 (42%), Gaps = 60/352 (17%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 145
N++ISGY + F A LFD +D+V+W M+ G+VRN +A F M +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 146 -------------------------------------DVVSWNAMLSGYAQNGYADEARE 168
DV ++++ Y + D+A++
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--KSD-------WELISWNCLMGGF 219
VF +MP +N ++W L+A YV + ++ +F+ KSD + C G
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 220 VKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 279
+ R + + + + + + T+I Y + G + +A +F++ ++V+TWTAM++
Sbjct: 322 LHRGRRVHCYMIKNSIEI-NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 280 GYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR---- 331
G+ +G +A F M NE+++ A+++ ++ R LF +M R
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 332 -NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-VSWAAIISGYAQTGHYE 381
+ M+ +G+ G + +A+ L + MP V W A+ YE
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 65/340 (19%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D N +IS + +G D A R+F+ + V++ AMI G++RN S A F +
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 111 MPQRDLVSWNVMLT------GYVRNRRLG------------------------------- 133
M + + + + + G V + R G
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 134 ---DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGL 184
DA+++FD MP ++VV+W A+++GY Q+ D+ VF +M P++ +S +
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS--SV 312
Query: 185 LAAYVHNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 240
L+A H G + C + + + + L+ +VK L A +F+++H ++V
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 241 VSWNTMISGYAQDGDMSQAKNLF------DQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
+W MI+G+A G A +LF SP++ T+ A++S G+++E R F
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE--VTFMAVLSACAHGGLVEEGRRLF 430
Query: 295 DQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP 329
M + + Y MV + + ++ A+ L E MP
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 71/315 (22%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMI-------SGYLRNARF- 101
+D D++ W +I +RNG A+ F M +++ V+ N M +G + + RF
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEM-KKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 102 ---------------------SL------------ARDLFDKMPQRDLVSWNVMLTGYVR 128
SL A+ +FD+MP R++V+W ++ GYV+
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 129 NRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-- 182
+R +F+ M + DV + +++LS A G R V M KN+I N
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI-KNSIEINTT 342
Query: 183 ---GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR- 238
L+ YV G +EEA +F+ + + +W ++ GF G AR FD +
Sbjct: 343 AGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH---GYARDAFDLFYTML 399
Query: 239 ------DVVSWNTMISGYAQDGDMSQAKNL-------FDQSPHQDVFTWTAMVSGYVQNG 285
+ V++ ++S A G + + + L F+ P D + MV + + G
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKAD--HYACMVDLFGRKG 457
Query: 286 MLDEARTFFDQMPQK 300
+L+EA+ ++MP +
Sbjct: 458 LLEEAKALIERMPME 472
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 32/241 (13%)
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM--------FIEIKRDGESLNRSTFS 403
AR+L + W ++I GH+ + + + ++R+G +R TF
Sbjct: 55 ARRLLCQLQTLSIQLWDSLI------GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFP 108
Query: 404 CALSTCADIAALELGK----QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
L A +L Q H +VK G ++ FV N+L+ Y G A+ +F+G
Sbjct: 109 PLLK-----AVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG 163
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
E+KDVV+W MI G+ R+G +A++ F MK GV +E+T+V VL A AG ++
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA---AGKVE-D 219
Query: 520 TEYFYSMNKDYSVTPSSKH----YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+ S++ Y T K + ++D+ G+ ++AQ + MP +W AL+
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALI 278
Query: 576 G 576
Sbjct: 279 A 279
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 65/278 (23%)
Query: 68 GHC---DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL-------- 116
G C D A +VF+ MP R+ V++ A+I+GY+++ F +F++M + D+
Sbjct: 251 GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 117 -------------------------------VSWNVMLTGYVRNRRLGDARRLFDSMPQK 145
+ ++ YV+ L +A +F+ + +K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLF 201
+V +W AM++G+A +GYA +A ++FY M N +++ +L+A H G +EE RLF
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 202 ---------DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV-VSWNTMISGYA 251
+ K+D + C++ F ++ +L A+ L ++M + V W +
Sbjct: 431 LSMKGRFNMEPKAD----HYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Query: 252 -----QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 284
+ G + ++ + Q H +T A + QN
Sbjct: 487 LHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQN 524
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 277/488 (56%), Gaps = 18/488 (3%)
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----------DSKSDWELISWNCLMGG 218
VF ++P WN L+ Y + E + + + L+ C G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 219 FVK--RKMLGAARKL-FDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT 275
V+ + G ++ FDK DVV + + Y + D+ A+ +F + P ++ +WT
Sbjct: 125 QVRVGSSVHGLVLRIGFDK----DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 276 AMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS 335
A+V YV++G L+EA++ FD MP++N S+NA+V G V+S + A++LF+ MP R++ S
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 336 WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
+ +MI GY + GD+ AR LF+ D +W+A+I GYAQ G EA +F E+
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQV-VKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ +S C+ + EL +++ + + + +V AL+ M KCG + A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
+FE + ++D+VS+ +M+ G A HG G +A+ +FE M G+ PDE+ +L C +
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
L++ G YF M K YS+ S HY+C+++LL R G+L+EA +L+++MPFE A++WG+L
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
LG +HGNTE+ E A +F++EP ++G YVLLSN+YAA RW D ++R +M + G+
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 635 KVTGYSWV 642
K+ G SW+
Sbjct: 541 KICGRSWI 548
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 211/432 (48%), Gaps = 36/432 (8%)
Query: 76 VFNTMPRRSSVSYNAMISGY-------------LRNARFSLARDLFDKMPQRDLVSWNVM 122
VF +P + +N +I GY +R R LAR P V N
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN-- 122
Query: 123 LTGYVR--NRRLGDARRL-FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
G VR + G R+ FD KDVV + + Y + AR+VF +MP +NA+
Sbjct: 123 -NGQVRVGSSVHGLVLRIGFD----KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAV 177
Query: 180 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
SW L+ AYV +G +EEA +FD + L SWN L+ G VK L A+KLFD+M RD
Sbjct: 178 SWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRD 237
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
++S+ +MI GYA+ GDM A++LF+++ DV W+A++ GY QNG +EA F +M
Sbjct: 238 IISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCA 297
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY---------GQNGDIA 350
KN ++ G + + EL E + S N + Y + G +
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
+A KLF+ MPQRD VS+ +++ G A G EA+ +F ++ +G + F+ L C
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVG--NALLGMYFKCGSIGEANDVFEGIE-EKDVVS 467
+E G + + ++++ Y + ++ + + G + EA ++ + + E +
Sbjct: 418 QSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 468 WNTMIAGYARHG 479
W +++ G + HG
Sbjct: 477 WGSLLGGCSLHG 488
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 182/346 (52%), Gaps = 58/346 (16%)
Query: 72 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRR 131
SA +VF MP R++VS+ A++ Y+++ A+ +FD MP+R+L SWN ++ G V++
Sbjct: 163 SARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGD 222
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
L +A++LFD MP++D++S+ +M+ GYA+ G AR++F + + +W+ L+ Y N
Sbjct: 223 LVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 192 GRIEEACRLF------DSKSD----WELISWNCLMGGF---------VKRKM-------- 224
G+ EA ++F + K D L+S MG F + ++M
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV 342
Query: 225 -------------LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------ 265
+ A KLF++M RD+VS+ +M+ G A G S+A LF++
Sbjct: 343 VPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 402
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDM 320
P + FT V G Q+ +++E +F+ M +K I Y+ +V ++ K+
Sbjct: 403 VPDEVAFTVILKVCG--QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 321 ARELFEAMP-SRNVSSWNTMITGYGQNG--DIAQ--ARKLFDMMPQ 361
A EL ++MP + S+W +++ G +G +IA+ AR LF++ PQ
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 325 bits (833), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 320/592 (54%), Gaps = 35/592 (5%)
Query: 112 PQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFY 171
P++ + ++ Y + +AR LFD MP +DVV+W AM++GYA + Y A E F+
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 172 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKL 231
+M K S N + V ++CR + +++++ L+ G V + LG L
Sbjct: 101 EMV-KQGTSPNEFTLSSVL-----KSCR------NMKVLAYGALVHGVVVK--LGMEGSL 146
Query: 232 FDKMHVRDVVSWNTMISGYAQ-DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA 290
+ N M++ YA M A +F ++ TWT +++G+ G
Sbjct: 147 YVD---------NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGG 197
Query: 291 RTFFDQMPQKN-EISYNAMVAGYVQSNKMD---MARELFEAMPSR----NVSSWNTMITG 342
+ QM +N E++ + S +D +++ ++ R N+ N+++
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y + G +++A+ F M +D ++W +IS ++ EAL MF + G N TF
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTF 316
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGIE 461
+ ++ CA+IAAL G+Q+HG++ + G+ + NAL+ MY KCG+I ++ VF E ++
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
+++VSW +M+ GY HG+G +A+ +F+ M + G++PD I + VLSAC HAGL+++G +
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 522 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 581
YF M +Y + P Y C++DLLGRAG++ EA +L+ MPF+P ++WGA+LGA + H
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Query: 582 G-NTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
N + AA V +++P G YV+LS +YAA G+W D +R MR +G +K G S
Sbjct: 497 KHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMS 556
Query: 641 WVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVE 692
W+ V+N++ F V D P +Y+ L L + R GYV +++D E
Sbjct: 557 WILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 135/303 (44%), Gaps = 33/303 (10%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N+++ Y R S A+ F +M +DL++WN +++ R+ +A +F + V
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFV 310
Query: 149 ----SWNAMLSGYAQNGYADEARE----VFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 200
++ ++++ A + ++ +F + +KN N L+ Y G I ++ R+
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 201 FDSKSDWE-LISWNCLMGGFVKRKMLGAARKLFDKM---HVR-DVVSWNTMISGYAQDGD 255
F D L+SW +M G+ A +LFDKM +R D + + ++S G
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Query: 256 MSQAKNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM 308
+ + F+ +P +D++ + G + G + EA ++MP K + S
Sbjct: 431 VEKGLKYFNVMESEYGINPDRDIYNCVVDLLG--RAGKIGEAYELVERMPFKPDESTWGA 488
Query: 309 VAGYVQSNKMD------MARELFEAMPSRNVSSWNTMITGYGQNG---DIAQARKLFDMM 359
+ G +++K + AR++ E P + V ++ + Y G D A+ RK+ MM
Sbjct: 489 ILGACKAHKHNGLISRLAARKVMELKP-KMVGTYVMLSYIYAAEGKWVDFARVRKMMRMM 547
Query: 360 PQR 362
+
Sbjct: 548 GNK 550
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSL 103
+++D DL+ WN +IS R+ + AL +F + V ++ ++++ A +
Sbjct: 273 EMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 104 ARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLF-DSMPQKDVVSWNAMLSGYA 158
+ L ++ +R ++ N ++ Y + + D++R+F + + ++++VSW +M+ GY
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 159 QNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS--- 211
+GY EA E+F +M + I + +L+A H G +E+ + F+ I+
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 212 --WNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMI 247
+NC++ + +G A +L ++M + D +W ++
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 322 bits (824), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 322/649 (49%), Gaps = 62/649 (9%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 145
N ++ Y++ A LFD+MP+RD VSWN M++GY +L DA LF M +
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 146 -DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACR 199
D S++ +L G A D +V + + K N L+ Y R+E+A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQV-HGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 200 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW---------------- 243
F S+ +SWN L+ GFV+ + + A L M ++ V+
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 244 ------------------------NTMISGYAQDGDMSQAKNLFD-QSPHQDVFTWTAMV 278
N MIS YA G +S AK +FD +D+ +W +M+
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 279 SGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV- 333
+G+ ++ + + A F QM + + +Y +++ + L + + +
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 334 ---SSWNTMITGYGQ--NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 388
S+ N +I+ Y Q G + A LF+ + +D +SW +II+G+AQ G E+A+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 389 EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
++ ++ FS L +C+D+A L+LG+QIH K+G+ + FV ++L+ MY KCG
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Query: 449 SIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
I A F+ I K V+WN MI GYA+HG G+ +L +F M VK D +T +L
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 567
+ACSH GLI G E M Y + P +HY +DLLGRAG + +A++L+ +MP P
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPD 577
Query: 568 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 627
LG R G E+ + A + ++EP + YV LS++Y+ +W + +++
Sbjct: 578 PMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637
Query: 628 MRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMR 676
M++ GV+KV G+SW+E++N++ F D +P IY +++L +M+
Sbjct: 638 MKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 153/307 (49%), Gaps = 23/307 (7%)
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
+ D+ N ++ Y + G + A LFD+ P +D +W M+SGY G L++A F
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 297 MPQKNE----ISYNAMVAGYVQSNKMDMARE----LFEAMPSRNVSSWNTMITGYGQNGD 348
M + S++ ++ G + D+ + + + NV ++++ Y +
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM--FIEIKRDGESLNRSTFSCAL 406
+ A + F + + + VSW A+I+G+ Q + A + +E+K +++ TF+ L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA-AVTMDAGTFAPLL 210
Query: 407 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI-EEKDV 465
+ D L KQ+H +V+K G + + NA++ Y CGS+ +A VF+G+ KD+
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-----------HAG 514
+SWN+MIAG+++H + A +F M+ V+ D T G+LSACS H
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 515 LIDRGTE 521
+I +G E
Sbjct: 331 VIKKGLE 337
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 145/305 (47%), Gaps = 28/305 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLF 108
DL+ WN +I+ ++ +SA +F M R +Y ++S + L
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 109 DKMPQRDL----VSWNVMLTGYVR--NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ ++ L + N +++ Y++ + DA LF+S+ KD++SWN++++G+AQ G
Sbjct: 329 GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 163 ADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
+++A + F + + +++ LL + ++ ++ + +S ++
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISS 448
Query: 219 FV----KRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-- 271
+ K ++ +ARK F ++ + V+WN MI GYAQ G + +LF Q +Q+V
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 272 --FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMAREL 324
T+TA+++ G++ E + M +I Y A V ++ ++ A+EL
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
Query: 325 FEAMP 329
E+MP
Sbjct: 569 IESMP 573
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 422 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 481
H +K G + +V N +L Y K G +G AN +F+ + ++D VSWNTMI+GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 482 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 541
+ A +F MK G D + +L + D G E + + + +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG-EQVHGLVIKGGYECNVYVGSS 141
Query: 542 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
++D+ + R+E+A + + + EP + SW AL+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 175
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV-----SYNAMISGYLRNARFSL 103
+K DL+ WN +I+ + G + A++ F+ + R S + +++A++ A L
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYL-RSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 104 ARDLFDKMPQRDLVSWNVMLTG----YVRNRRLGDARRLFDSMPQK-DVVSWNAMLSGYA 158
+ + + VS +++ Y + + AR+ F + K V+WNAM+ GYA
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 159 QNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFD 202
Q+G + ++F QM ++N +++ +L A H G I+E L +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 312/622 (50%), Gaps = 29/622 (4%)
Query: 76 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 135
VF+ P S +IS Y R RF A +FD++ R+ S+N +L Y DA
Sbjct: 50 VFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDA 107
Query: 136 RRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS--WNGLLAAYVHNGR 193
LF +SW S Y+ + ++ + + + W G LA VH
Sbjct: 108 FSLF--------LSWIGS-SCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 194 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 253
I FDS ++ N ++ + K + +ARK+FD+M RDVVSWN+MISGY+Q
Sbjct: 159 IRGG---FDS----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 254 GDMSQAKNLF-------DQSPHQDVFTWTAMVSGYVQNGM--LDEARTFFDQMPQKNEIS 304
G K ++ D P+ G + + L+ + + Q +
Sbjct: 212 GSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
NA++ Y + +D AR LF+ M ++ ++ +I+GY +G + +A LF M
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
+W A+ISG Q H+EE +N F E+ R G N T S L + + L+ GK+IH
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
++ G + +V +++ Y K G + A VF+ +++ +++W +I YA HG A
Sbjct: 392 AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSA 451
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+F+ M+ +G KPD++T+ VLSA +H+G D F SM Y + P +HY CM+
Sbjct: 452 CSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVS 511
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM 604
+L RAG+L +A + + MP +P A WGALL + + G+ E+ A + +F+MEP N+G
Sbjct: 512 VLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN 571
Query: 605 YVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 664
Y +++NLY +GRW +A +R++M+ +G++K+ G SW+E + + F D +
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEM 631
Query: 665 YAFLEELDLKMRREGYVSSTKL 686
Y +E L M + Y+ +L
Sbjct: 632 YEIIEGLVESMSDKEYIRKQEL 653
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 182/437 (41%), Gaps = 94/437 (21%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ N +I+ + + + +SA +VF+ M R VS+N+MISGY ++ F + ++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 111 M----------------------------------------PQRDLVSWNVMLTGYVRNR 130
M Q DL N ++ Y +
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 131 RLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVH 190
L AR LFD M +KD V++ A++SGY +G EA +F +M +WN +++ +
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 191 NGRIEEACRLF---------------------------------------DSKSDWELIS 211
N EE F + +D +
Sbjct: 344 NNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYV 403
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SP 267
++ + K L A+++FD R +++W +I+ YA GD A +LFDQ
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT 463
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMAR 322
D T TA++S + +G D A+ FD M K +I Y MV+ ++ K+ A
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 323 ELFEAMPSRNVSS-WNTMITGYGQNGDIAQAR----KLFDMMPQRDCVSWAAIISGYAQT 377
E MP ++ W ++ G GD+ AR +LF+M P+ + ++ + + Y Q
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPE-NTGNYTIMANLYTQA 582
Query: 378 GHYEEALNMFIEIKRDG 394
G +EEA + ++KR G
Sbjct: 583 GRWEEAEMVRNKMKRIG 599
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 54/305 (17%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + D + + +IS +M +G A+ +F+ M ++NAMISG ++N +
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 108 FDKMPQ----------------------------------RDLVSWNVMLT-----GYVR 128
F +M + R+ N+ +T Y +
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 129 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGL 184
L A+R+FD+ + +++W A+++ YA +G +D A +F QM + ++ +
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 185 LAAYVHNGRIEEACRLFDS---KSDWE--LISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
L+A+ H+G + A +FDS K D E + + C++ + L A + KM +
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 240 VVS-WNTMISGYAQDGDMSQAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
+ W +++G + GD+ A+ LF+ P ++ +T M + Y Q G +EA
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEP-ENTGNYTIMANLYTQAGRWEEAEMVR 592
Query: 295 DQMPQ 299
++M +
Sbjct: 593 NKMKR 597
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 212/746 (28%), Positives = 352/746 (47%), Gaps = 126/746 (16%)
Query: 59 KVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------- 111
K++ + + G D A +VF+ MP R++ ++N MI Y+ N + A L+ M
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 112 -------------PQRDLVS-------------------WNVMLTGYVRNRRLGDARRLF 139
RD+ S N +++ Y +N L ARRLF
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 140 DSMPQK-DVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAIS-------------- 180
D +K D V WN++LS Y+ +G + E E+F +M P N+ +
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 181 ----------------------WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
N L+A Y G++ +A R+ ++ ++++WN L+ G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 219 FVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQ-------------------DGD 255
+V+ M A + F M H D VS ++I+ + D +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 256 MSQAKNLFDQSPH----------------QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
+ L D +D+ +WT +++GY QN EA F + +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 300 K----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS---WNTMITGYGQNGDIAQA 352
K +E+ +++ M + +E+ + + + N ++ YG+ ++ A
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYA 540
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
++F+ + +D VSW ++IS A G+ EA+ +F + G S + C LS A +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 413 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 472
+AL G++IH +++ G+ + A++ MY CG + A VF+ IE K ++ + +MI
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 473 AGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSV 532
Y HG GK A+ +F+ M+ V PD I+ + +L ACSHAGL+D G + M +Y +
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
P +HY C++D+LGRA + EA + ++ M EP A W ALL A R H E+GE AA+
Sbjct: 721 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQ 780
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFT 652
+ ++EP N G VL+SN++A GRW D +R++M+ G++K G SW+E+ K+HKFT
Sbjct: 781 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFT 840
Query: 653 VGDCFHPEKDRIYAFLEELDLKMRRE 678
D HPE IY L E+ K+ RE
Sbjct: 841 ARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 7/256 (2%)
Query: 324 LFEAMPSRNVSSW-NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
+F+ PS + ++ YG+ G + A K+FD MP R +W +I Y G
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
AL ++ ++ +G L S+F L CA + + G ++H +VK GY + F+ NAL+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 443 MYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
MY K + A +F+G +EK D V WN++++ Y+ G + L +F M G P+
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC--MIDLLGRAGRLEEAQDLM 559
T+V L+AC G E S+ K S T SS+ Y C +I + R G++ +A+ ++
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLK--SSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 560 RNMPFEPPAASWGALL 575
R M +W +L+
Sbjct: 344 RQMN-NADVVTWNSLI 358
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 35/343 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D DL+ W VI+ + +N AL +F + ++ + + MI G + A L L K
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKK-RMEIDEMILGSILRASSVLKSMLIVK 507
Query: 111 MPQ--------RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
D V N ++ Y + R +G A R+F+S+ KDVVSW +M+S A NG
Sbjct: 508 EIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 163 ADEAREVFYQMPHKN---------AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWN 213
EA E+F +M I + ++ GR E C L E
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGR-EIHCYLLRKGFCLEGSIAV 626
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV-- 271
++ + L +A+ +FD++ + ++ + +MI+ Y G A LFD+ H++V
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 272 --FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMAREL 324
++ A++ G+LDE R F M + E+ Y +V ++N + A E
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 325 FEAMPSRNVSS-WNTMITGYGQN-----GDIAQARKLFDMMPQ 361
+ M + + W ++ + G+IA A++L ++ P+
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIA-AQRLLELEPK 788
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 317/639 (49%), Gaps = 59/639 (9%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------ 142
N+ + + AR +FDKMP D+VSW ++ YV +A LF +M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 143 --PQKDVVSW---------------------------------NAMLSGYAQNGYADEAR 167
P V+S +++L Y + G D++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLMGGFVKRK 223
VF +MP +NA++W ++ VH GR +E F S E +S + + +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 224 MLGAARKLFDKMHVRDVVSW----NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 279
+ + + + VR V+ N++ + Y + G+M LF+ +DV +WT+++
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 280 GYVQNGM-LDEARTFF----DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR--- 331
Y + G + TF Q+P NE ++ +M + +++ +L + S
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVP-PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 332 -NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
++S N+M+ Y G++ A LF M RD +SW+ II GY Q G EE F +
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
++ G + LS ++A +E G+Q+H + G E V ++L+ MY KCGSI
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
EA+ +F + D+VS MI GYA HG K+A+ +FE +G +PD +T + VL+AC
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
+H+G +D G YF M + Y++ P+ +HY CM+DLL RAGRL +A+ ++ M ++
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
W LL A + G+ E G +AAE + +++P + V L+N+Y+++G +A N+R M+
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 631 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 669
GV K G+S +++++ + F GD FHP+ + IY LE
Sbjct: 643 KGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 154/390 (39%), Gaps = 61/390 (15%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD-- 115
+ ++ + R G D + RVF+ MP R++V++ A+I+G + R+ F +M + +
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 116 -------------------------------------LVSWNVMLTGYVRNRRLGDARRL 138
L N + T Y + D L
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRI 194
F++M ++DVVSW +++ Y + G +A E F +M + N ++ + +A R+
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 195 ----EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 250
+ C + + L N +M + L +A LF M RD++SW+T+I GY
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 251 AQDGDMSQAKNLFD------QSPHQDVFTWTAMVSG---YVQNGMLDEARTFFDQMPQKN 301
Q G + F P VSG ++ G A + Q N
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ-N 445
Query: 302 EISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ 361
++++ Y + + A +F ++ S MI GY ++G +A LF+ +
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 362 ----RDCVSWAAIISGYAQTGHYEEALNMF 387
D V++ ++++ +G + + F
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
F N+ L G++ A VF+ + D+VSW ++I Y +AL++F +M+ +
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 495 --GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
V PD + VL AC + I G E ++ S+ S + ++D+ R G++
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYG-ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 553 EEAQDLMRNMPFEPPAASWGALL 575
+++ + MPF A +W A++
Sbjct: 160 DKSCRVFSEMPFR-NAVTWTAII 181
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 349/666 (52%), Gaps = 51/666 (7%)
Query: 71 DSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGY 126
D +VF+ M R++ V++N +IS Y++ R + A F M + ++ VS+ +
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 127 VRNRRLGDARRLFDSMPQ------KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS 180
+R + A + M + KD+ ++ +S YA+ G + +R VF +N
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 181 WNGLLAAYVHNGRIEEACRLF-DSKSDWELIS-----------WNCLMGGFVKRKMLGAA 228
WN ++ YV N + E+ LF ++ E++S + L + R+ G
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 229 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 288
K F ++ +V N+++ Y++ G + ++ +F +DV +W M+S +VQNG+ D
Sbjct: 345 SKNFREL---PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 289 EARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL----------FEAMPSRNVS 334
E +M ++ + I+ A+++ ++ ++ FE M S
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--- 458
Query: 335 SWNTMITGYGQNGDIAQARKLFDM--MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 392
+I Y ++G I ++KLF+ +RD +W ++ISGY Q GH E+ +F ++
Sbjct: 459 ----LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
N T + L C+ I +++LGKQ+HG ++ + FV +AL+ MY K G+I
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 453 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH 512
A D+F +E++ V++ TMI GY +HG G++A+ +F SM+ G+KPD IT V VLSACS+
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634
Query: 513 AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS-W 571
+GLID G + F M + Y++ PSS+HY C+ D+LGR GR+ EA + ++ + E A W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 572 GALLGASRIHGNTELGEKAAEMVFKME--PHNSGMYVLLSNLYAASGRWADAGNMRSRMR 629
G+LLG+ ++HG EL E +E + K + + SG VLLSN+YA +W +R MR
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754
Query: 630 DVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLH 689
+ G++K G S +E+ ++ F D HP IY ++ L MR + ++++ V
Sbjct: 755 EKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTP 814
Query: 690 DVEEEE 695
+E +E
Sbjct: 815 SLELDE 820
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 274/587 (46%), Gaps = 88/587 (14%)
Query: 87 SYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK- 145
S + +S ++ LAR LFD +P+ V WN ++ G++ N +A + M +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 146 -----DVVSWNAMLSGYAQ------------------------------NGYA------- 163
D ++++ L A+ N Y
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 164 ----DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISW-NC 214
D R+VF M KN ++WN L++ YV GR EACR F E+ +S+ N
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 215 LMGGFVKRKM------LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
+ R + G KL D+ +V+D+ ++ IS YA+ GD+ ++ +FD
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDE-YVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 269 QDVFTWTAMVSGYVQNGMLDEA-RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 323
+++ W M+ YVQN L E+ F + + K +E++Y + ++++ R+
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 324 LFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 378
F S+N + N+++ Y + G + ++ +F M +RD VSW +IS + Q G
Sbjct: 340 -FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 379 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG- 437
+E L + E+++ G ++ T + LS +++ E+GKQ H +++ G + F G
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGM 455
Query: 438 -NALLGMYFKCGSIGEANDVFE--GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
+ L+ MY K G I + +FE G E+D +WN+MI+GY ++G ++ +VF M
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 495 GVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNK--DYSVTPSSKHYTCMIDLLGRAGR 551
++P+ +T+ +L ACS G +D G + + +S+ + D +V +S ++D+ +AG
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS----ALVDMYSKAGA 571
Query: 552 LEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
++ A+D+ +LG +G +GE+A + M+
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILG----YGQHGMGERAISLFLSMQ 614
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN-------------- 98
DL + IS + G +S+ RVF++ R+ +N MI Y++N
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI 309
Query: 99 ---------ARFSLARDLFDKMPQRDL-----------------VSWNVMLTGYVRNRRL 132
+ LA + Q +L V N ++ Y R +
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV 369
Query: 133 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAY 188
+ +F SM ++DVVSWN M+S + QNG DE + Y+M + + I+ LL+A
Sbjct: 370 HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAA 429
Query: 189 --VHNGRIEEACRLFDSKSDWELISWNC-LMGGFVKRKMLGAARKLFDKMHV--RDVVSW 243
+ N I + F + + N L+ + K ++ ++KLF+ RD +W
Sbjct: 430 SNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 244 NTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF----FD 295
N+MISGY Q+G + + + +Q+ + T +++ Q G +D +
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 296 QMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKL 355
Q +N +A+V Y ++ + A ++F RN ++ TMI GYGQ+G +A L
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 356 FDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIK 391
F M + D +++ A++S + +G +E L +F E++
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMR 649
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 25/272 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS-SVSYNAMISGYLRNARFSLARDL 107
+++ D++ WN +IS ++NG D L + M ++ + Y + + L +A +L
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA--LLSAASNLRNKE 436
Query: 108 FDKMPQRDLVSWNVMLTG--------YVRNRRLGDARRLFD--SMPQKDVVSWNAMLSGY 157
K L+ + G Y ++ + +++LF+ ++D +WN+M+SGY
Sbjct: 437 IGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 158 AQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRL--FDSKS--DWEL 209
QNG+ ++ VF +M + NA++ +L A G ++ +L F + D +
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 210 ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQ 265
+ L+ + K + A +F + R+ V++ TMI GY Q G +A +LF +
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
D T+ A++S +G++DE F++M
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 293/551 (53%), Gaps = 23/551 (4%)
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAY-----VHNGRIEEAC 198
+ WN +++ YA+N +E + +M K +A ++ +L A V GR+
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 199 RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ 258
S L N L+ + + + +G AR+LFD+M RD VSWN +I+ YA +G S+
Sbjct: 170 IEVSSYKS-SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 259 AKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-KNEISYNAMVAGYV 313
A LFD+ V TW + G +Q G A +M + AM+ G
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 314 QSNKMDMARELFEAMPSRNVSSW-------NTMITGYGQNGDIAQARKLFDMMPQRDCVS 366
+ + R E SS+ NT+IT Y + D+ A +F + +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
W +IISGYAQ EEA ++ E+ G N T + L CA IA L+ GK+ H ++
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 427 K-TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
+ ++ + N+L+ +Y K G I A V + + ++D V++ ++I GY G G AL
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 545
+F+ M G+KPD +T+V VLSACSH+ L+ G F M +Y + P +H++CM+DL
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 546 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY 605
GRAG L +A+D++ NMP++P A+W LL A IHGNT++G+ AAE + +M+P N G Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 606 VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIY 665
VL++N+YAA+G W+ +R+ MRD+GV+K G +W++ + F+VGD PE Y
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 666 AFLEELDLKMR 676
L+ L+ M+
Sbjct: 649 PLLDGLNQLMK 659
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 239/559 (42%), Gaps = 74/559 (13%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSL 103
D+ P L WN +I+++ +N + + + M R + +Y +++ +
Sbjct: 105 DILHP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 104 ARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
R + + + L N +++ Y R R +G ARRLFD M ++D VSWNA+++ YA
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 160 NGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL-ISWNC 214
G EA E+F +M + I+WN + + G A L ++ +
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSW--------NTMISGYAQDGDMSQAKNLFDQS 266
++ G ++GA R L ++H + S NT+I+ Y++ D+ A +F Q+
Sbjct: 283 MIIGLKACSLIGAIR-LGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAR 322
+ TW +++SGY Q +EA +M Q N I+ +++ + + +
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 323 ELFEAMPSRNVSS-----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
E + R WN+++ Y ++G I A+++ D+M +RD V++ ++I GY
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G AL +F E+ R G + T LS C+ + G+++ ++ C G
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM-------QCEYG 514
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 497
+F C M+ Y R GF +A + +M K
Sbjct: 515 IRPCLQHFSC-----------------------MVDLYGRAGFLAKAKDIIHNMP---YK 548
Query: 498 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI-DLLGRAG---RLE 553
P T +L+AC G G ++ K + P + Y +I ++ AG +L
Sbjct: 549 PSGATWATLLNACHIHGNTQIGK---WAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLA 605
Query: 554 EAQDLMRNMPFEP-PAASW 571
E + +MR++ + P +W
Sbjct: 606 EVRTIMRDLGVKKDPGCAW 624
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 18/267 (6%)
Query: 375 AQTGHYEEALNMFIEIKRDGES-----LNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
A GH +A F ++ S L + + LS C D+ A G Q+H + +G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
E + L+ Y EA + E + + WN +IA YA++ ++ + ++
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC--MIDLLG 547
M + G++PD T VL AC + G S+ + S Y C +I +
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS---SYKSSLYVCNALISMYK 190
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 607
R + A+ L M FE A SW A++ G + +A E+ KM + V+
Sbjct: 191 RFRNMGIARRLFDRM-FERDAVSWNAVINCYASEG---MWSEAFELFDKMWFSGVEVSVI 246
Query: 608 LSNLYAA----SGRWADAGNMRSRMRD 630
N+ + +G + A + SRMR+
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRN 273
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 252/421 (59%), Gaps = 8/421 (1%)
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVSGYVQNG 285
+ARK+FD+M R+V +WN MI GY +GD A LF++ S ++ TW M+ GY +
Sbjct: 99 SARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRI 158
Query: 286 MLDEARTFFDQMP--QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 343
+++AR F++MP KN +++ M+ YV + KM+ AR+ FE +P +N W+ M++GY
Sbjct: 159 EIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGY 218
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ GD+ +AR +F + RD V W +I+GYAQ G+ ++A++ F ++ +G + T S
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
LS CA L++G+++H + G E FV NAL+ MY KCG + A VFE I +
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 523
V N+MI+ A HG GK+AL +F +M+++ +KPDEIT + VL+AC H G + G + F
Sbjct: 339 SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIF 398
Query: 524 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
M K V P+ KH+ C+I LLGR+G+L+EA L++ M +P GALLGA ++H +
Sbjct: 399 SEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMD 457
Query: 584 TELGEKAAEMVFK----MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGY 639
TE+ E+ +++ ++ +SNLYA + RW A +R M G++K G
Sbjct: 458 TEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGL 517
Query: 640 S 640
S
Sbjct: 518 S 518
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 222/474 (46%), Gaps = 57/474 (12%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
+ +I H+ G AL ++ + RR V + + LR + R + K+ + +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGI-RRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESI 73
Query: 118 SWNV---------MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
+ V +++ Y + + AR++FD MP+++V +WNAM+ GY NG A A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 169 VFYQMP-HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL---ISWNCLMGGFVKRKM 224
+F ++ +N ++W ++ Y IE+A LF+ + +EL +W+ ++G +V +
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFE-RMPFELKNVKAWSVMLGVYVNNRK 192
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 284
+ ARK F+ + ++ W+ M+SGY + GD+ +A+ +F + +D+ W +++GY QN
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 285 GMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SW 336
G D+A F M + + ++ +++++ QS ++D+ RE+ + R +
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 312
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
N +I Y + GD+ A +F+ + R ++IS A G +EAL MF ++
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLK 372
Query: 397 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 456
+ TF L+ C +HG + G K S + DV
Sbjct: 373 PDEITFIAVLTAC-----------VHGGFLMEG---------------LKIFSEMKTQDV 406
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
+ +V + +I R G K+A + +K + VKP++ + +L AC
Sbjct: 407 -----KPNVKHFGCLIHLLGRSGKLKEA---YRLVKEMHVKPNDTVLGALLGAC 452
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 46/369 (12%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D++ + +IS + + G SA +VF+ MP R+ ++NAMI GY+ N LA LF+++
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 113 Q-RDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKDVVSWNAMLSGYAQNGYADEAREV 169
R+ V+W M+ GY + + AR LF+ MP K+V +W+ ML Y N ++AR+
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
F +P KNA W+ +++ Y G + EA +F +L+ W
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW----------------- 242
Query: 230 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNG 285
NT+I+GYAQ+G A + F + D T ++++S Q+G
Sbjct: 243 --------------NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
Query: 286 MLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMIT 341
LD R + + N+ NA++ Y + ++ A +FE++ R+V+ N+MI+
Sbjct: 289 RLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMIS 348
Query: 342 GYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+G +A ++F M D +++ A+++ G E L +F E+K
Sbjct: 349 CLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKP 408
Query: 398 NRSTFSCAL 406
N F C +
Sbjct: 409 NVKHFGCLI 417
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 170/331 (51%), Gaps = 19/331 (5%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPR-RSSVSYNAMISGYLRNARFSLARD 106
++ + ++ WN +I +M NG A +F + R++V++ MI GY + AR+
Sbjct: 106 EMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 107 LFDKMP--QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
LF++MP +++ +W+VML YV NR++ DAR+ F+ +P+K+ W+ M+SGY + G
Sbjct: 166 LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFV 220
EAR +FY++ ++ + WN L+A Y NG ++A F + + + ++ + ++
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 221 KRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
+ L R++ ++ R + N +I YA+ GD+ A ++F+ + V +
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 277 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR- 331
M+S +G EA F M + +EI++ A++ V + ++F M ++
Sbjct: 346 MISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD 405
Query: 332 ---NVSSWNTMITGYGQNGDIAQARKLFDMM 359
NV + +I G++G + +A +L M
Sbjct: 406 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 12/294 (4%)
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ-RDC 364
+++++ Y + + AR++F+ MP RNV++WN MI GY NGD A LF+ + R+
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
V+W +I GY + E+A +F + E N +S L + +E ++
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPF--ELKNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
+ E FV + ++ YF+ G + EA +F + +D+V WNT+IAGYA++G+ A
Sbjct: 203 IP----EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 258
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+ F +M+ G +PD +T+ +LSAC+ +G +D G E +S+ + + +ID
Sbjct: 259 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE-VHSLINHRGIELNQFVSNALID 317
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
+ + G LE A + ++ A +++ IHG G++A EM ME
Sbjct: 318 MYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHGK---GKEALEMFSTME 367
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA-LELGKQIHGQVVKT 428
+I + G +AL ++ I+R G L CA + + LGK +H + +K
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFP-GWVPLILRACACVVPRVVLGKLLHSESIKF 75
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 488
G + VG++L+ MY KCG + A VF+ + E++V +WN MI GY +G A +F
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 489 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 548
E I V + +T + ++ I++ E F M + + K ++ M+ +
Sbjct: 136 EE---ISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVYVN 189
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALL 575
++E+A+ ++P E A W ++
Sbjct: 190 NRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 334/664 (50%), Gaps = 66/664 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNG-------HCDSALRVFNTMPRRSSVSYNAMISGYLRNAR 100
++ DPD++ WN ++S N SA VF+ +++S+ G+L +
Sbjct: 136 NLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 101 FSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
L + + DLV N +T Y R+ ARR+FD M KD++SWN++LSG +Q
Sbjct: 196 --LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 161 G-YADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRL--FDSKSDWE--LIS 211
G + EA +F M + +S+ ++ H ++ A ++ K +E L
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
N LM + K +L A + +F +M R+VVSW TMIS D +S N+ + +
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDA-VSIFLNMRFDGVYPNE 372
Query: 272 FTWTAMVSGYVQNGMLDEA--------RTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE 323
T+ +++ N + E +T F P N+ + Y + ++ A++
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG----NSFITLYAKFEALEDAKK 428
Query: 324 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
FE + R + SWN MI+G+ QNG +A K+F +S A+T E
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMF--------------LSAAAETMPNEYT 474
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
G LN F A+ +++ G++ H ++K G + V +ALL M
Sbjct: 475 F---------GSVLNAIAF-------AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 444 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
Y K G+I E+ VF + +K+ W ++I+ Y+ HG + + +F M V PD +T
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
+ VL+AC+ G++D+G E F M + Y++ PS +HY+CM+D+LGRAGRL+EA++LM +P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 564 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 623
P + ++LG+ R+HGN ++G K AE+ +M+P SG YV + N+YA W A
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 624 MRSRMRDVGVQKVTGYSWVEVQN-----KIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 678
+R MR V K G+SW++V + + F+ GD HP+ D IY +E + L+M E
Sbjct: 699 IRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLE 758
Query: 679 GYVS 682
G V+
Sbjct: 759 GKVA 762
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 352 ARKLFDMMPQRDCV-SWAAIISGYAQTGHYEEALNMF---IEIKRDGESLNRSTFSCALS 407
A KLFD QR+ S IS + AL++F +++ G ++ T AL
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
C L+ G QIHG +G+ + V NA++GMY K G A +FE + + DVVS
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 468 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA-----GLIDRGTEY 522
WNT+++G+ + + AL MK+ GV D T LS C + GL + T
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 523 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+ D V S I + R+G A+ + M F+ SW +LL
Sbjct: 202 KTGLESDLVVGNS------FITMYSRSGSFRGARRVFDEMSFK-DMISWNSLL 247
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 306 bits (783), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 283/525 (53%), Gaps = 23/525 (4%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
+R+ D SW ++ +Q+ E +V+ M H + I + +
Sbjct: 57 VKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDM-HNSGIPPSSHAVT-----SV 110
Query: 195 EEACRLFDSKSDWELISWNCLMGG-----FVKRKMLGA---------ARKLFDKMHVRDV 240
AC ++ D + I L G +V+ ++G A+K FD + ++
Sbjct: 111 LRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNT 170
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
VSWN+++ GY + G++ +A+ +FD+ P +D +W ++S Y + G + A + F MP K
Sbjct: 171 VSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK 230
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP 360
+ S+N ++ GYV +M +AR F+AMP +N SW TMI+GY + GD+ A +LF +M
Sbjct: 231 SPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMS 290
Query: 361 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCALSTCADIAALELG 418
++D + + A+I+ Y Q G ++AL +F ++ + + T S +S + + G
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
+ + + G + + +L+ +Y K G +A +F + +KD VS++ MI G +
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGIN 410
Query: 479 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 538
G +A +F +M + P+ +T G+LSA SH+GL+ G + F SM KD+++ PS+ H
Sbjct: 411 GMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADH 469
Query: 539 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
Y M+D+LGRAGRLEEA +L+++MP +P A WGALL AS +H N E GE A K+E
Sbjct: 470 YGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLE 529
Query: 599 PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
+G L+ +Y++ GRW DA +R +++ + K G SWVE
Sbjct: 530 TDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 175/348 (50%), Gaps = 29/348 (8%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
D+ + + + WN ++ ++ +G D A RVF+ +P + +VS+N +IS Y + A L
Sbjct: 164 DIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSL 223
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
F MP + SWN+++ GYV R + AR FD+MPQK+ VSW M+SGY + G A
Sbjct: 224 FSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE 283
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF------------DSKSDWELISWNCL 215
E+F M K+ + ++ ++A Y NG+ ++A +LF D + ++S N
Sbjct: 284 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 216 MGGFVKRKMLGAARKLFDKMH---VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
+G G + + H + D++S ++I Y + GD ++A +F +D
Sbjct: 344 LG----NTSFGTWVESYITEHGIKIDDLLS-TSLIDLYMKGGDFAKAFKMFSNLNKKDTV 398
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM 328
+++AM+ G NGM EA + F M +K N +++ +++ Y S + + F +M
Sbjct: 399 SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM 458
Query: 329 PSRNVSS----WNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 371
N+ + M+ G+ G + +A +L MP Q + W A++
Sbjct: 459 KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 161/317 (50%), Gaps = 14/317 (4%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
++ Y R LA+ FD + +++ VSWN +L GY+ + L +ARR+FD +P+KD V
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 202
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
SWN ++S YA+ G A +F MP K+ SWN L+ YV+ ++ A FD+
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKN 262
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
+SW ++ G+ K + +A +LF M +D + ++ MI+ Y Q+G A LF Q
Sbjct: 263 GVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLE 322
Query: 269 Q------DVFTWTAMVSGYVQNGMLDEA---RTFFDQMPQK-NEISYNAMVAGYVQSNKM 318
+ D T +++VS Q G ++ + K +++ +++ Y++
Sbjct: 323 RNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDF 382
Query: 319 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGY 374
A ++F + ++ S++ MI G G NG +A LF M ++ + V++ ++S Y
Sbjct: 383 AKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 375 AQTGHYEEALNMFIEIK 391
+ +G +E F +K
Sbjct: 443 SHSGLVQEGYKCFNSMK 459
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 305 bits (781), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 197/678 (29%), Positives = 333/678 (49%), Gaps = 67/678 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYL-------RNARF 101
+ D D++ WN +I+ N A R F M + + A I+ L +N
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIAC 243
Query: 102 SLARDLFDKMPQRDLVSW--------NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAM 153
R + + QR SW N +++ Y+R R+ +A LF M KD+VSWN +
Sbjct: 244 RSGRQIHSYVVQR---SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 154 LSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW- 212
++GYA N +A ++F+ + HK +S + + + + +L D S E+ S+
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISI----LPVCAQLTDLASGKEIHSYI 356
Query: 213 -------------NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ- 258
N L+ + + AA F M +D++SWN ++ +A Q
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 259 ---AKNLFDQSPHQDVFTWTAM---------------VSGY-VQNGMLDEARTFFDQMPQ 299
+L +++ D T ++ V GY V+ G+L + ++ P+
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHD-----EEEPK 471
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDM 358
NA++ Y + ++ A ++F + R + S+N++++GY +G A+ LF
Sbjct: 472 LG----NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTE 527
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
M D +W+ ++ YA++ EA+ +F EI+ G N T L CA +A+L L
Sbjct: 528 MSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLV 587
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
+Q HG +++ G G LL +Y KCGS+ A VF+ +D+V + M+AGYA H
Sbjct: 588 RQCHGYIIRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVH 646
Query: 479 GFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH 538
G GK+ALM++ M +KPD + + +L+AC HAGLI G + + S+ + + P+ +
Sbjct: 647 GRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQ 706
Query: 539 YTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
Y C +DL+ R GRL++A + MP EP A WG LL A + +LG A + + E
Sbjct: 707 YACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAE 766
Query: 599 PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFH 658
++G +VL+SN+YAA +W +R+ M+ ++K G SW+EV + + F GDC H
Sbjct: 767 SDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSH 826
Query: 659 PEKDRIYAFLEELDLKMR 676
P +D I+ + L L+M+
Sbjct: 827 PRRDSIFDLVNALYLQMK 844
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 212/474 (44%), Gaps = 74/474 (15%)
Query: 90 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGY-VRNRRLGDARRLFDSM-----P 143
++++ Y + R + +F +M D V WN++LTG V R + R F +M P
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEP 118
Query: 144 QKDVVSWNAMLS-----GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI-EEA 197
+ V++ +L G + NG + + + + K+ + N L++ Y G I +A
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL-EKDTLVGNALVSMYAKFGFIFPDA 177
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 257
FD +D +++SWN ++ GF + M+ A + F M +++ N S
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM-LKEPTEPNYATIANVLPVCAS 236
Query: 258 QAKNLFDQSPHQ-------------DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS 304
KN+ +S Q VF ++VS Y++ G ++EA + F +M K+ +S
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSR--------------------------------- 331
+N ++AGY + + A +LF + +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 332 --------NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
+ S N +I+ Y + GD + A F +M +D +SW AI+ +A + +
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY---ETGCFVGNAL 440
LN+ + + +L+ T L C ++ + K++HG VK G E +GNAL
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 441 LGMYFKCGSIGEANDVFEGIEE-KDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
L Y KCG++ A+ +F G+ E + +VS+N++++GY G A M+F M T
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMST 530
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 14/234 (5%)
Query: 338 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+++ Y + + +K+F M D V W +++G + + E + F + E
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPK 119
Query: 398 NRS-TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI-GEAND 455
S TF+ L C + GK +H ++K G E VGNAL+ MY K G I +A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH--A 513
F+GI +KDVVSWN +IAG++ + A F M +P+ T+ VL C+
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 514 GLIDRGTEYFYSMNKDYSVTPS---SKHYTC--MIDLLGRAGRLEEAQDLMRNM 562
+ R +S Y V S + + C ++ R GR+EEA L M
Sbjct: 240 NIACRSGRQIHS----YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 384 LNMFIEIKR--DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
L F++ R G + F + CA ++ L G+ +HG V K G+ V ++L
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDE 500
MY KC + + +F ++ D V WN ++ G + G++ + F++M KP
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSS 122
Query: 501 ITMVGVLSACSHAG 514
+T VL C G
Sbjct: 123 VTFAIVLPLCVRLG 136
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 279/514 (54%), Gaps = 60/514 (11%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
A +LFD +P+ DV N +L G AQ+ ++ ++ +M K +S + +V
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFVL---- 119
Query: 195 EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG 254
+AC + +S+ + GFV + + A LF +A G
Sbjct: 120 -KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILF-----------------HANCG 161
Query: 255 DMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 314
D+ A LFD S + +++++++M +GY +
Sbjct: 162 DLGIASELFDDSA-------------------------------KAHKVAWSSMTSGYAK 190
Query: 315 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
K+D A LF+ MP ++ +WN MITG + ++ AR+LFD ++D V+W A+ISGY
Sbjct: 191 RGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGY 250
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YETG 433
G+ +EAL +F E++ GE + T LS CA + LE GK++H +++T +
Sbjct: 251 VNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 434 CFVG----NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
+VG NAL+ MY KCGSI A +VF G++++D+ +WNT+I G A H + ++ +FE
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFE 369
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
M+ + V P+E+T +GV+ ACSH+G +D G +YF M Y++ P+ KHY CM+D+LGRA
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 550 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 609
G+LEEA + +M EP A W LLGA +I+GN ELG+ A E + M SG YVLLS
Sbjct: 430 GQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLS 489
Query: 610 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
N+YA++G+W +R D V+K TG S +E
Sbjct: 490 NIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 27/350 (7%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N +I H G A +F+ + V++++M SGY + + A LFD+MP +D V
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM---- 173
+WNVM+TG ++ + + AR LFD +KDVV+WNAM+SGY GY EA +F +M
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 174 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS---------WNCLMGGFVKRKM 224
H + ++ LL+A G +E RL + +S WN L+ + K
Sbjct: 271 EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGS 330
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYA---QDGDMSQAKNLFDQSPHQDVFTWTAMVSGY 281
+ A ++F + RD+ +WNT+I G A +G + + + + T+ ++
Sbjct: 331 IDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILAC 390
Query: 282 VQNGMLDEARTFFDQMP-----QKNEISYNAMVAGYVQSNKMDMARELFEAMP-SRNVSS 335
+G +DE R +F M + N Y MV ++ +++ A E+M N
Sbjct: 391 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV 450
Query: 336 WNTMITGYGQNGDIAQAR----KLFDMMPQRDCVSWAAIISGYAQTGHYE 381
W T++ G++ + KL M + + + + + YA TG ++
Sbjct: 451 WRTLLGACKIYGNVELGKYANEKLLSMR-KDESGDYVLLSNIYASTGQWD 499
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 174/394 (44%), Gaps = 60/394 (15%)
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV 313
G + A LFD+ P DV ++ G Q+ ++ + + +M +K +S + +V
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFV 118
Query: 314 ---------QSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+SN ++ N N +I + GD+ A +LFD +
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
V+W+++ SGYA+ G +EA+ +F E+ Q
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEM-----------------------------PYKDQ 209
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
V TGC KC + A ++F+ EKDVV+WN MI+GY G+ K+A
Sbjct: 210 VAWNVMITGC----------LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEA 259
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS----SKHYT 540
L +F+ M+ G PD +T++ +LSAC+ G ++ G + + SV+ S + +
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWN 319
Query: 541 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH---GNTELGEKAAEMVFKM 597
+ID+ + G ++ A ++ R + + ++W L+ +H G+ E+ E+ + K+
Sbjct: 320 ALIDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLALHHAEGSIEMFEEMQRL--KV 376
Query: 598 EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
P N ++ + + SGR + S MRD+
Sbjct: 377 WP-NEVTFIGVILACSHSGRVDEGRKYFSLMRDM 409
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 154/336 (45%), Gaps = 38/336 (11%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR 114
+ W+ + S + + G D A+R+F+ MP + V++N MI+G L+ AR+LFD+ ++
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK 238
Query: 115 DLVSWNVMLTGYVR----NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVF 170
D+V+WN M++GYV LG + + D+ DVV+ ++LS A G + + +
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 171 YQMPHKNAIS---------WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK 221
+ ++S WN L+ Y G I+ A +F D +L +WN L+ G
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 222 RKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT---- 273
G+ ++F++M V V++ +I + G + + + F S +D++
Sbjct: 359 HHAEGSI-EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF--SLMRDMYNIEPN 415
Query: 274 ---WTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVA-----GYVQSNKMDMAREL 324
+ MV + G L+EA F + M + N I + ++ G V+ K A E
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGK--YANEK 473
Query: 325 FEAMPSRNVSSWNTMITGYGQNGD---IAQARKLFD 357
+M + + Y G + + RK+FD
Sbjct: 474 LLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFD 509
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 196/679 (28%), Positives = 324/679 (47%), Gaps = 95/679 (13%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGY-----LRNARFSLARDL 107
WN +I+ +RN + + +F+ M + S +Y+++++ LR + AR +
Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
K D+ ++ Y + + +A +F +P VVSW MLSGY ++ A A
Sbjct: 279 --KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSAL 336
Query: 168 EVFYQMPHK----------NAISWNG-----------------------------LLAAY 188
E+F +M H + IS G L++ Y
Sbjct: 337 EIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMY 396
Query: 189 VHNGRIEEACRLFDSKSDWELISW-NCLMGGFVKRKMLGAARKLFDKMH----------- 236
+G I+ + ++F+ D + + N ++ F + K G A +LF +M
Sbjct: 397 SKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV 456
Query: 237 -------------------------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
V D+ +++ + Y++ G + ++ LF P +D
Sbjct: 457 CSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAREL--- 324
W +M+SG+ + G L EA F +M +E + A++ + +E+
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 325 -FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
A + + + ++ Y + G + AR+++D +P+ D VS +++ISGY+Q G ++
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
+F ++ G +++ S L A LG Q+H + K G T VG++LL M
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTM 696
Query: 444 YFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
Y K GSI + F I D+++W +IA YA+HG +AL V+ MK G KPD++T
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
VGVLSACSH GL++ + SM KDY + P ++HY CM+D LGR+GRL EA+ + NM
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 564 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 623
+P A WG LL A +IHG ELG+ AA+ ++EP ++G Y+ LSN+ A G W +
Sbjct: 817 IKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEE 876
Query: 624 MRSRMRDVGVQKVTGYSWV 642
R M+ GVQK G+S V
Sbjct: 877 TRKLMKGTGVQKEPGWSSV 895
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/572 (25%), Positives = 267/572 (46%), Gaps = 109/572 (19%)
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
FD + L+SW Y + + DA +LFD++PQ DVVS N M+SGY Q+ +E+
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 168 EVFYQMP----HKNAISWNGLLAA-----------------------------------Y 188
F +M N IS+ +++A +
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 189 VHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV----RDVVSWN 244
N R E+A ++F + WN ++ G ++ + GA LF +M V D +++
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 245 TMISGYA-----QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
++++ A + G + QA+ + + +DVF TA+V Y + G + EA F ++P
Sbjct: 256 SVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAM---------------------PS-----RNV 333
+ +S+ M++GY +SN A E+F+ M PS V
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 334 SSW-------------NTMITGYGQNGDIAQARKLF---DMMPQRDCVSWAAIISGYAQT 377
+W +I+ Y ++GDI + ++F D + +++ V+ +I+ ++Q+
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQS 431
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFS-CALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
+A+ +F + ++G L FS C+L + D L LGKQ+HG +K+G V
Sbjct: 432 KKPGKAIRLFTRMLQEG--LRTDEFSVCSLLSVLD--CLNLGKQVHGYTLKSGLVLDLTV 487
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 496
G++L +Y KCGS+ E+ +F+GI KD W +MI+G+ +G+ ++A+ +F M G
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 497 KPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
PDE T+ VL+ CS + RG E + Y++ + + ++++ + G L+ A
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA--GIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 556 QDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
+ + +P P + + G S+ HG + G
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQ-HGLIQDG 636
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/642 (23%), Positives = 275/642 (42%), Gaps = 117/642 (18%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQ 144
+A+I + +N RF A +F ++ WN ++ G +RN+ G LF M +
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 145 KDVVSWNAMLSGYA-----QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACR 199
D +++++L+ A + G +AR + + ++ ++ Y G + EA
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 200 LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGD 255
+F + ++SW ++ G+ K +A ++F +M V + ++IS +
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 256 MSQAKN----LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP--QKNEISYNAMV 309
+ +A +F + D A++S Y ++G +D + F+ + Q+ I N M+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMI 425
Query: 310 AGYVQSNKMDMARELFEAMPSR------------------------------------NV 333
+ QS K A LF M ++
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
+ +++ T Y + G + ++ KLF +P +D WA++ISG+ + G+ EA+ +F E+ D
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
G S + ST + L+ C+ +L GK+IHG ++ G + G +G+AL+ MY KCGS+ A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-- 511
V++ + E D VS +++I+GY++HG + ++F M G D + +L A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 512 ---------HA------------------------GLIDRGTEYFYSMNKDYSVTPSSKH 538
HA G ID + F +N P
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING-----PDLIA 720
Query: 539 YTCMIDLLGRAGRLEEA---QDLMRNMPFEP---------PAASWGALLGASRIHGNTEL 586
+T +I + G+ EA +LM+ F+P A S G L+ S H N+ +
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 587 GEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
+ + +EP N YV + + SGR +A + + M
Sbjct: 781 KD------YGIEPENR-HYVCMVDALGRSGRLREAESFINNM 815
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 135/307 (43%), Gaps = 39/307 (12%)
Query: 325 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 384
F+ ++++ SW Y +G +A A KLFD +PQ D VS +ISGY Q +EE+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
F ++ G N ++ +S C+ + A + + +K GY V +AL+ ++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
K +A VF +V WNT+IAG R+ +F M KPD T
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 505 GVLSACS-----------HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 553
VL+AC+ A +I G E + T ++DL + G +
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-------------TAIVDLYAKCGHMA 302
Query: 554 EAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYV---LLSN 610
EA ++ +P P SW +L G T+ + + + E +SG+ + +++
Sbjct: 303 EAMEVFSRIP-NPSVVSWTVMLS-----GYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 611 LYAASGR 617
+ +A GR
Sbjct: 357 VISACGR 363
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 221/837 (26%), Positives = 382/837 (45%), Gaps = 140/837 (16%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------ 111
N ++S +++ +A ++F+ M R+ ++ MIS + ++ F+ A LF++M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 112 PQ--------------RDL-----VSWNVMLTGYVRNRRLG--------------DARRL 138
P RD+ V +V+ TG+ N +G +A L
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHK---------------- 176
F S+ D +SW M+S EA + + +M P++
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE 241
Query: 177 ----------------NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV 220
N + L+ Y ++E+A R+ +S + ++ W ++ GFV
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 221 KRKMLGAARKLFDKMH--------------------VRDV-----VSWNTMISGYAQDGD 255
+ A F +M VR + + T+ G+ D
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 256 MS---------------QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
+ +A +F +V +WT ++ G V +G + + +M K
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV-K 420
Query: 301 NEISYNAM-VAGYVQS-NKMDMARELFEA---MPSRNVSS----WNTMITGYGQNGDIAQ 351
E+ N + ++G +++ +K+ R + E + R+V N+++ Y + +
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY 480
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
A + M +RD +++ ++++ + + G +E AL++ + DG +++ + +S A+
Sbjct: 481 AWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASAN 540
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 471
+ ALE GK +H VK+G+ V N+L+ MY KCGS+ +A VFE I DVVSWN +
Sbjct: 541 LGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGL 600
Query: 472 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 531
++G A +GF AL FE M+ +PD +T + +LSACS+ L D G EYF M K Y+
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYN 660
Query: 532 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 591
+ P +HY ++ +LGRAGRLEEA ++ M +P A + LL A R GN LGE A
Sbjct: 661 IEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMA 720
Query: 592 EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKF 651
+ P + +Y+LL++LY SG+ A R+ M + + K G S VEVQ K+H F
Sbjct: 721 NKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSF 780
Query: 652 TVGDCFHPEK-DRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 710
D +K + IYA +E + +++R G +HS K AV
Sbjct: 781 VSEDVTRVDKTNGIYAEIESIKEEIKRFG------------SPYRGNENASFHSAKQAVV 828
Query: 711 FGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSC 767
+G + P+ V+KN +C+DCH + ++++V + I +RD ++ H F G CSC
Sbjct: 829 YGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 99/184 (53%)
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
N+ N +++ Y + I ARKLFD M R +W +IS + ++ + AL++F E+
Sbjct: 57 NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
G N TFS + +CA + + G ++HG V+KTG+E VG++L +Y KCG
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
EA ++F ++ D +SW MI+ ++AL + M GV P+E T V +L A S
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS 236
Query: 512 HAGL 515
GL
Sbjct: 237 FLGL 240
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 130/644 (20%), Positives = 252/644 (39%), Gaps = 116/644 (18%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
+ D+ W V+S +RN A+ F M + ++ +Y+A++S L +A SL
Sbjct: 287 EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS--LCSAVRSLD-- 342
Query: 107 LFDKMPQRDLVSW---------NVMLTGYVR-NRRLGDARRLFDSMPQKDVVSWNAMLSG 156
F K + N ++ Y++ + +A R+F +M +VVSW ++ G
Sbjct: 343 -FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 157 YAQNGYADEAREVFYQMPHK----NAISWNGLLAA---YVHNGRIEEA-CRLFDSKSDWE 208
+G+ + + +M + N ++ +G+L A H R+ E L D E
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGE 461
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD----MSQAKNLFD 264
++ N L+ + + + A + M RD +++ ++++ + + G +S ++
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 265 QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMD 319
D + +S G L+ + K+ S N++V Y + ++
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGK-HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLE 580
Query: 320 MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
A+++FE + + +V SWN +++G NG I+
Sbjct: 581 DAKKVFEEIATPDVVSWNGLVSGLASNGFISS---------------------------- 612
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
AL+ F E++ + TF LS C++ +LG + + QV+K Y
Sbjct: 613 ---ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMKKIYNI------- 661
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
E V + ++ R G ++A V E+M +KP+
Sbjct: 662 ----------------------EPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPN 696
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH-YTCMIDLLGRAGRLEEAQDL 558
+ +L AC + G + G + NK ++ PS Y + DL +G+ E AQ
Sbjct: 697 AMIFKTLLRACRYRGNLSLGEDM---ANKGLALAPSDPALYILLADLYDESGKPELAQK- 752
Query: 559 MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 618
RN+ E + LG S + ++ +E V +++ N G+Y + ++ R+
Sbjct: 753 TRNLMTEKRLSKK---LGKSTVEVQGKVHSFVSEDVTRVDKTN-GIYAEIESIKEEIKRF 808
Query: 619 ADA--GNMRSRMRDVGVQKVTGYSWVEVQNKIH----KFTVGDC 656
GN + V G+ + + +H K DC
Sbjct: 809 GSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
LS C ++ +G IH V+K G + N LL +Y K I A +F+ + + V
Sbjct: 31 LSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 525
+W MI+ + + AL +FE M G P+E T V+ +C+ I G S
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 526 MNKD----YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW----GALLGA 577
+ K SV SS + DL + G+ +EA +L ++ SW +L+GA
Sbjct: 150 VIKTGFEGNSVVGSS-----LSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISSLVGA 203
Query: 578 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 608
+ E + +EMV P N +V L
Sbjct: 204 RKWR---EALQFYSEMVKAGVPPNEFTFVKL 231
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 302 bits (773), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 307/592 (51%), Gaps = 29/592 (4%)
Query: 81 PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDAR 136
PR + ++++ MI Y N A DL+ KM + ++ +L R + D +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 137 RLFDSMPQKDVVS----WNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG 192
+ + D + A++ YA+ G + A +VF +MP ++ ++WN +++ + +
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 193 RIEEACRLFDSKSDWELISWN--CLMGGFVKRKMLGAAR--KLFDKMHVR-----DVVSW 243
+ + LF + +S N ++G F GA R K R D+V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 303
++ YA+ + A+ +FD ++ TW+AM+ GYV+N M+ EA F QM + +
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 304 SYNAMVA------GYVQSNKMDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQAR 353
+ VA G + + R + +A +++ NT+I+ Y + G + A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
+ F + +D +S+ ++I+G EE+ +F E++ G + +T L+ C+ +A
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLA 423
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
AL G HG V GY + NAL+ MY KCG + A VF+ + ++D+VSWNTM+
Sbjct: 424 ALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK-DYSV 532
G+ HG GK+AL +F SM+ GV PDE+T++ +LSACSH+GL+D G + F SM++ D++V
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Query: 533 TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
P HY CM DLL RAG L+EA D + MPFEP G LL A + N ELG + ++
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK 603
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV 644
+ + + VLLSN Y+A+ RW DA +R + G+ K GYSWV+V
Sbjct: 604 KMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 176/423 (41%), Gaps = 104/423 (24%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ ++ + + G + A++VF+ MP+R V++NAMISG+ + + LF M
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 113 QRDLVSWNV----------------------------------------MLTGYVRNRRL 132
+ D +S N+ +L Y +++ +
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256
Query: 133 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG 192
ARR+FD +K+ V+W+AM+ GY +N EA EVF+QM ++ N + V G
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIG 312
Query: 193 RIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 252
I C F S + + GF + D+ NT+IS YA+
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGF-----------------ILDLTVQNTIISFYAK 355
Query: 253 DGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK------------ 300
G + A F + +DV ++ ++++G V N +E+ F +M
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 301 ---------------------------NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
N NA++ Y + K+D+A+ +F+ M R++
Sbjct: 416 LTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDI 475
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIE 389
SWNTM+ G+G +G +A LF+ M + D V+ AI+S + +G +E +F
Sbjct: 476 VSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNS 535
Query: 390 IKR 392
+ R
Sbjct: 536 MSR 538
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 81/316 (25%)
Query: 250 YAQDGDMSQAKNLFDQSPHQDV--FTWTAMVSGYVQNGMLDEARTFFDQM------PQKN 301
YA ++ A+++FD+ PH + W M+ Y N ++A + +M P K
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 302 EISY---------------------------------NAMVAGYVQSNKMDMARELFEAM 328
+ A+V Y + +++MA ++F+ M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 329 PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 388
P R++ +WN MI+G+ + C++ + + +F+
Sbjct: 165 PKRDMVAWNAMISGFSLHC----------------CLT---------------DVIGLFL 193
Query: 389 EIKR-DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
+++R DG S N ST AL GK +HG + G+ V +L +Y K
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 448 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
I A VF+ +K+ V+W+ MI GY + K+A VF M + D + MV +
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPV 309
Query: 508 SACSHAGLIDRGTEYF 523
+ GLI G F
Sbjct: 310 A----IGLILMGCARF 321
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR--- 114
N ++ + + G D A RVF+TM +R VS+N M+ G+ + A LF+ M +
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 115 -DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD------VVSWNAMLSGYAQNGYADEAR 167
D V+ +L+ + + + ++LF+SM + D + +N M A+ GY DEA
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
Query: 168 EVFYQMPHKNAISWNGLL 185
+ +MP + I G L
Sbjct: 568 DFVNKMPFEPDIRVLGTL 585
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 258/471 (54%), Gaps = 44/471 (9%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI 303
N+++ YA G + +FD+ P +DV +W ++S YV NG ++A F +M Q++ +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 304 SY---------------------------------------NAMVAGYVQSNKMDMAREL 324
+ NA+V + + +D AR +
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 325 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 384
F++M +NV W +M+ GY G I +AR LF+ P +D V W A+++GY Q ++EAL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
+F ++ G + L+ CA ALE GK IHG + + VG AL+ MY
Sbjct: 265 ELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMY 324
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
KCG I A +VF I+E+D SW ++I G A +G +AL ++ M+ +GV+ D IT V
Sbjct: 325 AKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL---MRN 561
VL+AC+H G + G + F+SM + ++V P S+H +C+IDLL RAG L+EA++L MR
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRG 444
Query: 562 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADA 621
E + +LL A+R +GN ++ E+ AE + K+E +S + LL+++YA++ RW D
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 622 GNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCF--HPEKDRIYAFLEE 670
N+R +M+D+G++K G S +E+ H+F VGD HP+ D I + L +
Sbjct: 505 TNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 208/473 (43%), Gaps = 60/473 (12%)
Query: 84 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWN----VMLTGYVRNRRLGDARRL- 138
S + YN M+ F+ LF ++ + L N V+L R R++ + ++
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 139 ---FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIE 195
+ + D N+++ YA G + +VF +MP ++ +SWNGL+++YV NGR E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 196 EACRLFDSKSDWELISW---------------------------------------NCLM 216
+A +F S + + N L+
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALV 189
Query: 217 GGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
F K L AR +FD M ++V W +M+ GY G + +A+ LF++SP +DV WTA
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 277 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
M++GYVQ DEA F M + + +++ G Q+ ++ + + +
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 333 VS----SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFI 388
V+ ++ Y + G I A ++F + +RD SW ++I G A G AL+++
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 389 EIKRDGESLNRSTFSCALSTCADIAALELGKQI-HGQVVKTGYETGCFVGNALLGMYFKC 447
E++ G L+ TF L+ C + G++I H + + + L+ + +
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 448 GSIGEANDVFEGI----EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 496
G + EA ++ + + +E V + ++++ +G K A V E ++ + V
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 202/460 (43%), Gaps = 47/460 (10%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N ++ + G + +VF+ MP+R VS+N +IS Y+ N RF A +F +M Q +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 118 SWN-------VMLTGYVRNRRLGD-ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREV 169
++ + ++N +G+ R + + V NA++ + + G D+AR V
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
F M KN W ++ YV GRI+EA LF+ +++ W +M G+V+ A
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 230 KLFDKMHVRDVVSWN----TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 285
+LF M + N ++++G AQ G + Q K W + GY+
Sbjct: 265 ELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK-------------W---IHGYI--- 305
Query: 286 MLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQ 345
+E R D+ + A+V Y + ++ A E+F + R+ +SW ++I G
Sbjct: 306 --NENRVTVDK------VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 346 NGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEI-KRDGESLNRS 400
NG +A L+ M + D +++ A+++ G E +F + +R
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 460
SC + L+ +++ ++ ET V +LL G++ A V E +
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 461 EEKDV--VSWNTMIAG-YARHGFGKQALMVFESMKTIGVK 497
E+ +V S +T++A YA + V MK +G++
Sbjct: 478 EKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIR 517
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 174/405 (42%), Gaps = 63/405 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSY------------------------ 88
D++ WN +IS+++ NG + A+ VF M + S++ +
Sbjct: 111 DVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERI 170
Query: 89 ---------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
NA++ + + AR +FD M +++ W M+ GYV R+
Sbjct: 171 YRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRID 230
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN----GLLAAYV 189
+AR LF+ P KDVV W AM++GY Q DEA E+F M N LL
Sbjct: 231 EARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCA 290
Query: 190 HNGRIEEA----CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNT 245
G +E+ + +++ + + L+ + K + A ++F ++ RD SW +
Sbjct: 291 QTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTS 350
Query: 246 MISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
+I G A +G +A +L+ + D T+ A+++ G + E R F M +++
Sbjct: 351 LIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 302 EIS-----YNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQA 352
+ + ++ ++ +D A EL + M + V + ++++ G++ A
Sbjct: 411 NVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIA 470
Query: 353 RKLFDMMPQ---RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
++ + + + D + + S YA +E+ N+ ++K G
Sbjct: 471 ERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLG 515
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
+ ++ A + + L +F E++ G + T L + + + G+++HG V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 427 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 486
K G E +V N+L+GMY G I + VF+ + ++DVVSWN +I+ Y +G + A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 487 VFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 545
VF+ M + +K DE T+V LSACS ++ G + + ++ + S + ++D+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 546 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE-KAAEMVFKMEP-HNSG 603
+ G L++A+ + +M + W S + G G A ++F+ P +
Sbjct: 192 FCKCGCLDKARAVFDSMR-DKNVKCW-----TSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
++ + N Y R+ +A + M+ G++
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 48/235 (20%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
++D ++ W ++ ++ G D A +F P + V + AM++GY++ RF A +LF
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267
Query: 109 DKMPQRDLVSWNVMLT-------------------GYVRNRR------------------ 131
M + N +L GY+ R
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 132 --LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLL 185
+ A +F + ++D SW +++ G A NG + A +++Y+M + +AI++ +L
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 186 AAYVHNGRIEEACRLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKM 235
A H G + E ++F S ++ + +CL+ + +L A +L DKM
Sbjct: 388 TACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/652 (29%), Positives = 323/652 (49%), Gaps = 57/652 (8%)
Query: 74 LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
+R + ++VS N +++ Y ++ AR++FD+M +R++ SWN ++ YV+ +
Sbjct: 12 IRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVK 71
Query: 134 DARRLFDS-MPQKDVVSWNAMLSGYAQ-NGYADEAREVFYQMPHKN---------AISWN 182
+AR LF+S ++D++++N +LSG+A+ +G EA E+F +M K ++
Sbjct: 72 EARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTM 131
Query: 183 GLLAAYVHNGRIEEACR--LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-- 238
L+A + N E L + +D + + L+ + K +F+ V
Sbjct: 132 VKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFV 191
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQSPH-QDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
D V+ N MI+ Y ++GD+ +A ++F ++P D +W +++GY QNG +EA M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 298 PQK---------------------------------------NEISYNAMVAGYVQSNKM 318
+ N+ + +V Y + M
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 319 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 378
A N+ S ++MI GY G + +A++LFD + +++ V W A+ GY
Sbjct: 312 KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 379 HYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
+ L + I + + + L C+ A +E GK+IHG ++TG +
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 497
A + MY KCG++ A +F+ E+D V +N MIAG A HG ++ FE M G K
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 498 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 557
PDEIT + +LSAC H GL+ G +YF SM + Y+++P + HYTCMIDL G+A RL++A +
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 558 LMRNM-PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASG 616
LM + E A GA L A + NTEL ++ E + +E N Y+ ++N YA+SG
Sbjct: 552 LMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSG 611
Query: 617 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 668
RW + +R +MR ++ +G SW + + H FT D H E + IYA L
Sbjct: 612 RWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 301/606 (49%), Gaps = 54/606 (8%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 145
++++ YL+ + A+ LFD+MP+RD V WN ++ GY RN DA +LF M Q+
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 146 ------------------------------------DVVSWNAMLSGYAQNGYADEAREV 169
D NA++S Y++ A +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKML 225
F +M K+ +SWN ++ AY +G EEA +F+ + ++ L+ V + L
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
Query: 226 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNG 285
+ V D+ +++ Y++ G + A+ L+ + + T++VS Y + G
Sbjct: 269 HCL--VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 286 MLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL----FEAMPSRNVSSWN 337
+D A +F + Q + ++ ++ G +S+ +D+ L ++ N
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 338 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+IT Y + D+ LF+ + + +SW ++ISG Q+G A +F ++ G L
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 398 -NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 456
+ T + L+ C+ + L LGK++HG ++ +E FV AL+ MY KCG+ +A V
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI 516
F+ I+ +WN+MI+GY+ G +AL + M+ G+KPDEIT +GVLSAC+H G +
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 517 DRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
D G F +M K++ ++P+ +HY M+ LLGRA EA L+ M +P +A WGALL
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 577 ASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
A IH E+GE A +F ++ N G+YVL+SNLYA W D +R+ M+D G
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGY 686
Query: 637 TGYSWV 642
G S +
Sbjct: 687 LGVSQI 692
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 101/179 (56%)
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
R V +++ Y + G + A+ LFD MP+RD V W A+I GY++ G+ +A +FI +
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM 142
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
+ G S + +T L C + G+ +HG K+G E V NAL+ Y KC +
Sbjct: 143 LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAEL 202
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
G A +F +++K VSWNTMI Y++ G ++A+ VF++M V+ +T++ +LSA
Sbjct: 203 GSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 171/397 (43%), Gaps = 46/397 (11%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSL 103
++KD + WN +I + ++G + A+ VF M + S V+ ++S ++ +
Sbjct: 211 EMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL-- 268
Query: 104 ARDLFDKMPQ-RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
L K D+ ++ Y R L A RL+ S Q +V +++S YA+ G
Sbjct: 269 -HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 163 ADEAREVFY---QMPHK-NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
D A F Q+ K +A++ G+L + I+ L L + ++ G
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 219 FV----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
+ K + LF+++ ++SWN++ISG Q G S A +F Q
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ--------- 438
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
M++G G+L +A I+ +++AG Q +++ +EL N
Sbjct: 439 -MMLTG----GLLPDA------------ITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 335 SWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
+ N + T Y + G+ QA +F + +W ++ISGY+ +G AL+ ++E+
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
+ G + TF LS C ++ GK ++K
Sbjct: 542 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 384 LNMFIEIKRDGESLNRSTFSCAL-STCADIAALELG-KQIHGQVVKTGYETGCFVGNALL 441
+ +F ++ R + N T S L +T + +L +Q+ + K+G + +V +LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
+Y K G + A +F+ + E+D V WN +I GY+R+G+ A +F M G P
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T+V +L C G + +G + + + S+ +I + L A+ L R
Sbjct: 153 TLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 562 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK 596
M + SW ++GA + + L E+A VFK
Sbjct: 212 MK-DKSTVSWNTMIGA---YSQSGLQEEAIT-VFK 241
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 267/480 (55%), Gaps = 23/480 (4%)
Query: 203 SKSDWELISWNCLMGG-----FVKRKM---------LGAARKLFDKMHVRDVVSWNTMIS 248
S+++W+ I+ + ++ G F+ KM + A +LF+++ +V +N++I
Sbjct: 22 SRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIR 81
Query: 249 GYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQM----PQ 299
Y + ++ Q + D FT+ M G + + P+
Sbjct: 82 AYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPR 141
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 359
+ ++ NA++ Y++ + + A ++F+ M R+V SWN++++GY + G + +A+ LF +M
Sbjct: 142 FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
+ VSW A+ISGY G Y EA++ F E++ G + + L +CA + +LELGK
Sbjct: 202 LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 420 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHG 479
IH + G+ V NAL+ MY KCG I +A +F +E KDV+SW+TMI+GYA HG
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 321
Query: 480 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 539
A+ F M+ VKP+ IT +G+LSACSH G+ G YF M +DY + P +HY
Sbjct: 322 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY 381
Query: 540 TCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 599
C+ID+L RAG+LE A ++ + MP +P + WG+LL + R GN ++ A + + ++EP
Sbjct: 382 GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP 441
Query: 600 HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHP 659
+ G YVLL+N+YA G+W D +R +R+ ++K G S +EV N + +F GD P
Sbjct: 442 EDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 192/446 (43%), Gaps = 85/446 (19%)
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--KSDWEL------------ 209
D A +F Q+ + N +N ++ AY HN + R++ + +EL
Sbjct: 59 DYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKS 118
Query: 210 --------------------------ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 243
++ N L+ ++K L A K+FD+M+ RDV+SW
Sbjct: 119 CASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW 178
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----Q 299
N+++SGYA+ G M +AK LF + + +WTAM+SGY G EA FF +M +
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKL 355
+EIS +++ Q +++ + + R N +I Y + G I+QA +L
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
F M +D +SW+ +ISGYA G+ A+ F E++R N TF LS C+ +
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
+ G + + +++ Y+ E + + +I
Sbjct: 359 QEGLR-YFDMMRQDYQI-----------------------------EPKIEHYGCLIDVL 388
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
AR G ++A+ E KT+ +KPD +LS+C G +D +M+ + P
Sbjct: 389 ARAGKLERAV---EITKTMPMKPDSKIWGSLLSSCRTPGNLDVA---LVAMDHLVELEPE 442
Query: 536 SK-HYTCMIDLLGRAGRLEEAQDLMR 560
+Y + ++ G+ E+ L +
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRK 468
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 159/324 (49%), Gaps = 21/324 (6%)
Query: 81 PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFD 140
PR V+ NA+I Y++ A +FD+M +RD++SWN +L+GY R ++ A+ LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 141 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIE- 195
M K +VSW AM+SGY G EA + F +M + IS +L + G +E
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 196 -EACRLFDSKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 252
+ L+ + + + N L+ + K ++ A +LF +M +DV+SW+TMISGYA
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 253 DGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS---- 304
G+ A F++ V T+ ++S GM E +FD M Q +I
Sbjct: 320 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 305 -YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGYGQNGDIAQARKLFDMMPQ- 361
Y ++ ++ K++ A E+ + MP + S W ++++ G++ A D + +
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Query: 362 --RDCVSWAAIISGYAQTGHYEEA 383
D ++ + + YA G +E+
Sbjct: 440 EPEDMGNYVLLANIYADLGKWEDV 463
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 49/256 (19%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D++ WN ++S + R G A +F+ M ++ VS+ AMISGY + A D F +M
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 113 ----------------------QRDLVSW-----------------NVMLTGYVRNRRLG 133
+L W N ++ Y + +
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVIS 293
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYV 189
A +LF M KDV+SW+ M+SGYA +G A A E F +M N I++ GLL+A
Sbjct: 294 QAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 190 HNGRIEEACRLFD-SKSDWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSW 243
H G +E R FD + D+++ + CL+ + L A ++ M ++ D W
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 244 NTMISGYAQDGDMSQA 259
+++S G++ A
Sbjct: 414 GSLLSSCRTPGNLDVA 429
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 249/464 (53%), Gaps = 43/464 (9%)
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAG-------- 311
+QS + +WT+ ++ +NG L EA F M + N I++ A+++G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 312 ------------------------------YVQSNKMDMARELFEAMPSRNVSSWNTMIT 341
Y + + AR +F+ M +N +WNTMI
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 342 GYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 401
GY ++G + A K+FD MP+RD +SW A+I+G+ + G+ EEAL F E++ G +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 402 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
AL+ C ++ AL G +H V+ ++ V N+L+ +Y +CG + A VF +E
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
++ VVSWN++I G+A +G ++L+ F M+ G KPD +T G L+ACSH GL++ G
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 522 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 581
YF M DY ++P +HY C++DL RAGRLE+A L+++MP +P G+LL A H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 582 GNT-ELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
GN L E+ + + + + YV+LSN+YAA G+W A MR +M+ +G++K G+S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 641 WVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSST 684
+E+ + +H F GD H E I LE + +R +G V T
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 48/340 (14%)
Query: 90 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS 149
A+I Y + RF AR +FD M ++ V+WN M+ GY+R+ ++ +A ++FD MP++D++S
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 150 WNAMLSGYAQNGYADEAREVFYQM-------------------PHKNAISWNGLLAAYVH 190
W AM++G+ + GY +EA F +M + A+S+ + YV
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 191 NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 250
+ + R+ +S LI C G + AR++F M R VVSWN++I G+
Sbjct: 234 SQDFKNNVRVSNS-----LIDLYCRCG------CVEFARQVFYNMEKRTVVSWNSVIVGF 282
Query: 251 AQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-- 304
A +G+ ++ F + + D T+T ++ G+++E +F M IS
Sbjct: 283 AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPR 342
Query: 305 ---YNAMVAGYVQSNKMDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFD 357
Y +V Y ++ +++ A +L ++MP + + S + +G N I A +L
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN--IVLAERLMK 400
Query: 358 MMPQRDCVS---WAAIISGYAQTGHYEEALNMFIEIKRDG 394
+ + S + + + YA G +E A M ++K G
Sbjct: 401 HLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLG 440
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 19/295 (6%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
+I + + G A VF+ M ++SV++N MI GY+R+ + A +FDKMP+RDL+SW
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 120 NVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEA----REVFY 171
M+ G+V+ +A F M + D V+ A L+ G R V
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 172 QMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFV----KRKMLGA 227
Q N N L+ Y G +E A ++F + ++SWN ++ GF + L
Sbjct: 235 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVY 294
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSGYV 282
RK+ +K D V++ ++ + G + + F D + + +V Y
Sbjct: 295 FRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYS 354
Query: 283 QNGMLDEARTFFDQMPQK-NEISYNAMVAGYV-QSNKMDMARELFEAMPSRNVSS 335
+ G L++A MP K NE+ +++A N + +A L + + NV S
Sbjct: 355 RAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKS 409
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 157/346 (45%), Gaps = 28/346 (8%)
Query: 69 HCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLT 124
H + ++ N ++VS+ + I+ RN R + A F M + + +++ +L+
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS 79
Query: 125 G----YVRNRRLGDARRLFD---SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN 177
G + LGD + + + V+ A++ Y++ G +AR VF M KN
Sbjct: 80 GCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKN 139
Query: 178 AISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV 237
+++WN ++ Y+ +G+++ A ++FD + +LISW ++ GFVK+ A F +M +
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 238 R----DVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 289
D V+ ++ G +S + + Q +V +++ Y + G ++
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEF 259
Query: 290 ARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQ 345
AR F M ++ +S+N+++ G+ + + F M + + ++ +T
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 346 NGDIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALNM 386
G + + + F +M +S + ++ Y++ G E+AL +
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVS--YNAMISGYLRNARFSLARDLFDK 110
DL+ W +I+ ++ G+ + AL F M + S V Y A+I+ NA +L F
Sbjct: 170 DLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYVAIIAAL--NACTNLGALSFGL 226
Query: 111 MPQRDLVSW---------NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG 161
R ++S N ++ Y R + AR++F +M ++ VVSWN+++ G+A NG
Sbjct: 227 WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANG 286
Query: 162 YADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD-SKSDWELIS----W 212
A E+ F +M K +A+++ G L A H G +EE R F K D+ + +
Sbjct: 287 NAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY 346
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVR 238
CL+ + + L A KL M ++
Sbjct: 347 GCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/533 (34%), Positives = 271/533 (50%), Gaps = 48/533 (9%)
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
L AR +F+S+ V WN+M+ GY+ + D+A +FYQ + S + YV
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKAL-IFYQEMLRKGYSPDYFTFPYVL- 114
Query: 192 GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA 251
+AC S I + + GFV + M+V ++ Y
Sbjct: 115 ----KAC------SGLRDIQFGSCVHGFVVKTGFEV------NMYVS-----TCLLHMYM 153
Query: 252 QDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVA- 310
G+++ +F+ P +V W +++SG+V N +A F +M Q N + N +
Sbjct: 154 CCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM-QSNGVKANETIMV 212
Query: 311 -------------------GYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 351
G++Q D F++ NV ++I Y + GD+
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGFD---PYFQSKVGFNVILATSLIDMYAKCGDLRT 269
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
AR LFD MP+R VSW +II+GY+Q G EEAL MF+++ G + ++ TF +
Sbjct: 270 ARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMI 329
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 471
+LG+ IH V KTG+ + AL+ MY K G A FE +E+KD ++W +
Sbjct: 330 QGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVV 389
Query: 472 IAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
I G A HG G +AL +F+ M+ G PD IT +GVL ACSH GL++ G YF M +
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
+ P+ +HY CM+D+L RAGR EEA+ L++ MP +P WGALL IH N EL ++
Sbjct: 450 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRI 509
Query: 591 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVE 643
MV + E SG+YVLLSN+YA +GRWAD +R M+ V KV G+S VE
Sbjct: 510 RSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 176/381 (46%), Gaps = 43/381 (11%)
Query: 237 VRDVVSWNTMI---SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 293
+R+V+ + +I + + ++S A+++F+ V+ W +M+ GY + D+A F
Sbjct: 35 IRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIF 94
Query: 294 FDQMPQKN-------------------EISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
+ +M +K +I + + V G+V ++ N+
Sbjct: 95 YQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV-----------NMY 143
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
++ Y G++ ++F+ +PQ + V+W ++ISG+ + +A+ F E++ +G
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET--------GCFVGNALLGMYFK 446
N + L C + GK HG + G++ + +L+ MY K
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK 263
Query: 447 CGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
CG + A +F+G+ E+ +VSWN++I GY+++G ++AL +F M +G+ PD++T + V
Sbjct: 264 CGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
+ A G G ++K V ++ ++++ + G E A+ ++ +
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAI-VCALVNMYAKTGDAESAKKAFEDLEKKD 382
Query: 567 PAASWGALLG-ASRIHGNTEL 586
A ++G AS HGN L
Sbjct: 383 TIAWTVVIIGLASHGHGNEAL 403
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 164/353 (46%), Gaps = 74/353 (20%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ------ 113
++ +M G + LRVF +P+ + V++ ++ISG++ N RFS A + F +M
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 114 --------------RDLVS----------------------WNVMLTG-----YVRNRRL 132
+D+V+ +NV+L Y + L
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDL 267
Query: 133 GDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLA 186
AR LFD MP++ +VSWN++++GY+QNG A+EA +F M P K +++ ++
Sbjct: 268 RTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK--VTFLSVIR 325
Query: 187 AYVHNG--RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 240
A + G ++ ++ + SK+ D ++ L+ + K +A+K F+ + +D
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC--ALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFD 295
++W +I G A G ++A ++F + + D T+ ++ G+++E + +F
Sbjct: 384 IAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA 443
Query: 296 QMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITG 342
+M + + Y MV ++ + + A L + MP + NV+ W ++ G
Sbjct: 444 EMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 219/371 (59%), Gaps = 5/371 (1%)
Query: 306 NAMVAGYVQS-NKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
A++ Y S + + +AR+LF+ M RNV SW M++GY ++GDI+ A LF+ MP+RD
Sbjct: 165 TALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDV 224
Query: 365 VSWAAIISGYAQTGHYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHG 423
SW AI++ Q G + EA+++F I N T C LS CA L+L K IH
Sbjct: 225 PSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA 284
Query: 424 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 483
+ + FV N+L+ +Y KCG++ EA+ VF+ +K + +WN+MI +A HG ++
Sbjct: 285 FAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEE 344
Query: 484 ALMVFESMKTIGV---KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 540
A+ VFE M + + KPD IT +G+L+AC+H GL+ +G YF M + + P +HY
Sbjct: 345 AIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYG 404
Query: 541 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
C+IDLLGRAGR +EA ++M M + A WG+LL A +IHG+ +L E A + + + P+
Sbjct: 405 CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPN 464
Query: 601 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPE 660
N G +++NLY G W +A R ++ K G+S +E+ N++H+F D HPE
Sbjct: 465 NGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPE 524
Query: 661 KDRIYAFLEEL 671
+ IY L+ L
Sbjct: 525 TEEIYMILDSL 535
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 161/326 (49%), Gaps = 30/326 (9%)
Query: 86 VSYNAMISGYLRN-ARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ 144
V A++ Y + + +LAR LFD+M +R++VSW ML+GY R+ + +A LF+ MP+
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 145 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEA-- 197
+DV SWNA+L+ QNG EA +F +M ++ +I N +L+A G ++ A
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 198 CRLFDSKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
F + D ++ N L+ + K L A +F + + +WN+MI+ +A G
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 256 MSQAKNLFDQ-------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS---- 304
+A +F++ D T+ +++ G++ + R +FD M + I
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 305 -YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNG--DIAQ--ARKLFDM 358
Y ++ ++ + D A E+ M + + + W +++ +G D+A+ + L +
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 359 MPQRDCVSWAAIISG-YAQTGHYEEA 383
P + A+++ Y + G++EEA
Sbjct: 462 NPNNG--GYVAMMANLYGEMGNWEEA 485
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 95/421 (22%)
Query: 240 VVSWNTMISGYAQD-GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
VV ++ YA ++ A+ LFD+ ++V +WTAM+SGY ++G + A F+ MP
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 299 QKNEISYNAMVAGYVQSNKMDMARELFEAM---PS------------------------- 330
+++ S+NA++A Q+ A LF M PS
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 331 --------RNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 378
R++SS N+++ YG+ G++ +A +F M ++ +W ++I+ +A G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 379 HYEEALNMFIEIKR---DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
EEA+ +F E+ + + + TF L+ C HG +V G
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT-----------HGGLVSKGRGYFDL 389
Query: 436 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
+ N GIE + + + +I R G +AL E M T+
Sbjct: 390 MTNRF------------------GIEPR-IEHYGCLIDLLGRAGRFDEAL---EVMSTMK 427
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI-DLLGRAGRLEE 554
+K DE +L+AC G +D ++ ++ P++ Y M+ +L G G EE
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLAE---VAVKNLVALNPNNGGYVAMMANLYGEMGNWEE 484
Query: 555 AQDLMRNM----PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 610
A+ + + ++PP G SRI + E+ + + + K P +Y++L +
Sbjct: 485 ARRARKMIKHQNAYKPP--------GWSRIEIDNEVHQFYS--LDKSHPETEEIYMILDS 534
Query: 611 L 611
L
Sbjct: 535 L 535
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 125/288 (43%), Gaps = 27/288 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + +++ W ++S + R+G +A+ +F MP R S+NA+++ +N F A L
Sbjct: 187 EMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSL 246
Query: 108 FDKMPQRDLVSWN-----VMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAMLSGYA 158
F +M + N +L+ + L A+ + ++D+ S N+++ Y
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL-------IS 211
+ G +EA VF K+ +WN ++ + +GR EEA +F+ + I+
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 366
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQS 266
+ L+ ++ R FD M R + + +I + G +A +
Sbjct: 367 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Query: 267 PHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV 313
+ D W ++++ +G LD A ++ KN ++ N GYV
Sbjct: 427 KMKADEAIWGSLLNACKIHGHLDLA-----EVAVKNLVALNPNNGGYV 469
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/631 (28%), Positives = 329/631 (52%), Gaps = 29/631 (4%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARF-SLARDLFDKM----- 111
N +IS ++R G + A +VF+ MP R+ VSYNA+ S Y RN F S A L M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 112 -PQRDLVSWNVMLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
P + V + + + +G + ++ +VV ++L Y+ G + AR
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVKRKM 224
+F + +++A++WN ++ + N +IE+ F S D +++ ++ G K
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 225 LGAARKLFDKMHVRDVVSW----NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSG 280
+ + ++ V D ++ N ++ Y GDM +A +F + + ++ +W +++SG
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 281 YVQNGMLDEARTFFDQM-----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPS----R 331
+NG ++A + ++ P+ +E +++A ++ + + + L + R
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER 435
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+V T+++ Y +N + A+K+FD+M +RD V W +I G+++ G+ E A+ FIE+
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMY 495
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
R+ + + S + C+D+A L G+ H ++TG++ V AL+ MY K G
Sbjct: 496 REKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYE 555
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
A +F D+ WN+M+ Y++HG ++AL FE + G PD +T + +L+ACS
Sbjct: 556 TAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM-RNMPFEPPAAS 570
H G +G ++ ++ K+ + KHY+CM++L+ +AG ++EA +L+ ++ P A
Sbjct: 616 HRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL 674
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
W LL A N ++G AAE + K++P ++ ++LLSNLYA +GRW D MR ++R
Sbjct: 675 WRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRG 734
Query: 631 VGVQKVTGYSWVEV-QNKIHKFTVGDCFHPE 660
+ K G SW+EV N F+ GD +PE
Sbjct: 735 LASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 170/399 (42%), Gaps = 82/399 (20%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTM-----PRRSSVSYNAMISGYLRNARFSL 103
+ +P+L+ WN +IS NG + A+ ++ + PR +++A IS RF
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 104 ARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
+ L ++ +R + +L+ Y +NR A+++FD M ++DVV W M+ G+++
Sbjct: 421 GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSR 480
Query: 160 NGYADEAREVFYQM----PHKNAISWNGLLAA---------------------------- 187
G ++ A + F +M + S + ++ A
Sbjct: 481 LGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV 540
Query: 188 -------YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM----H 236
Y NG+ E A +F S+ +L WN ++G + + M+ A F+++
Sbjct: 541 CGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGF 600
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT----WTAMVSGYVQNGMLDEART 292
+ D V++ ++++ + G Q K L++Q Q + ++ MV+ + G++DEA
Sbjct: 601 MPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALE 660
Query: 293 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA 352
+Q P N N+ ++ R L A V++ N I Y A
Sbjct: 661 LIEQSPPGN--------------NQAELWRTLLSAC----VNTRNLQIGLYA-------A 695
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
++ + P+ D + + + YA G +E+ M +I+
Sbjct: 696 EQILKLDPE-DTATHILLSNLYAVNGRWEDVAEMRRKIR 733
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 26/193 (13%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSW-------------AAIISGYAQTGHYEEA 383
N +I+ Y + + QARK+FD MPQR+ V+ +++ S + G ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 384 LNMFI-EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC---FVGNA 439
M + EI L R C I L+ +QIH V+ G + N
Sbjct: 86 FFMPLNEIASSVVELTRK--------CVSITVLKRARQIHALVLTAGAGAATESPYANNN 137
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH-GFGKQALMVFESMKTIGVKP 498
L+ MY +CGS+ +A VF+ + ++VVS+N + + Y+R+ F A + M VKP
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 499 DEITMVGVLSACS 511
+ T ++ C+
Sbjct: 198 NSSTFTSLVQVCA 210
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 154/360 (42%), Gaps = 29/360 (8%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN-----ARFSLARDL 107
DL N ++ + G A VF + + VS+N++ISG N A R L
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYA 163
P+ D +++ ++ R + L + ++ V +LS Y +N A
Sbjct: 394 RMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREA 453
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGF 219
+ A++VF M ++ + W ++ + G E A + F K+ + S + ++G
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 220 VKRKMLGAARKLFDKMHVR---DVV--SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
ML ++F + +R D V ++ Y ++G A+ +F + + D+ W
Sbjct: 514 SDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS 330
+M+ Y Q+GM+++A +FF+Q+ + + ++Y +++A + L+ M
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 331 RNVSS----WNTMITGYGQNGDIAQARKLFDMMP--QRDCVSWAAIISGYAQTGHYEEAL 384
+ + + ++ M+ + G + +A +L + P W ++S T + + L
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 322/663 (48%), Gaps = 94/663 (14%)
Query: 69 HCDSALRVFNTMPRRSSVS-YNAMISGYLRNARF-------------------------- 101
HC SA VF RS V +N+++SGY +N+ F
Sbjct: 55 HC-SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNV 113
Query: 102 -----SLARDLFDKMPQR---------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV 147
+L R+ +M D+V + ++ Y + ++ ++FD MP++DV
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDV 173
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAA-----YVHNGR-IEEA 197
SWN ++S + Q+G A++A E+F +M N++S ++A ++ G+ I
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 198 CRLFDSKSDWELISW--NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
C K +EL + + L+ + K L AR++F KM + +V+WN+MI GY GD
Sbjct: 234 C----VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 256 MSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 309
+ ++ P Q T M +N + + +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN------------------LLHGKFI 331
Query: 310 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 369
GYV R + A N S +I Y + G+ A +F + SW
Sbjct: 332 HGYV-------IRSVVNADIYVNCS----LIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
+IS Y G++ +A+ ++ ++ G + TF+ L C+ +AALE GKQIH + ++
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
ET + +ALL MY KCG+ EA +F I +KDVVSW MI+ Y HG ++AL F+
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
M+ G+KPD +T++ VLSAC HAGLID G ++F M Y + P +HY+CMID+LGRA
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 550 GRLEEAQDLMRNMPFEPPAAS-WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLL 608
GRL EA ++++ P A L A +H LG++ A ++ + P ++ Y++L
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVL 620
Query: 609 SNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFL 668
NLYA+ W A +R +M+++G++K G SW+E+ +K+ F D H + +Y L
Sbjct: 621 FNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Query: 669 EEL 671
L
Sbjct: 681 ALL 683
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 227/485 (46%), Gaps = 43/485 (8%)
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP-QKDVVSWNAMLSGYAQNGYADEAREVFY 171
+RD+V ++ Y + AR +F++ + DV WN+++SGY++N + EVF
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 172 QMPH-----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 226
++ + ++ ++ ++ AY GR +G + ++
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGRE--------------------FLGRMIHTLVVK 135
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGM 286
+ +V DVV ++++ YA+ + +FD+ P +DV +W ++S + Q+G
Sbjct: 136 SG-------YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 287 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNT 338
++A F +M + N +S ++ + ++ +E+ + +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
++ YG+ + AR++F MP++ V+W ++I GY G + + + + +G +
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
++T + L C+ L GK IHG V+++ +V +L+ +YFKCG A VF
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 518
++ SWN MI+ Y G +A+ V++ M ++GVKPD +T VL ACS +++
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 519 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 578
G + S+++ + + ++D+ + G +EA + ++P + SW ++ A
Sbjct: 429 GKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAY 486
Query: 579 RIHGN 583
HG
Sbjct: 487 GSHGQ 491
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 206/444 (46%), Gaps = 43/444 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D++ + ++ + + +++L+VF+ MP R S+N +IS + ++ A +LF +M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 113 ----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYAD 164
+ + VS V ++ R L + + +K D +A++ Y + +
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKR-- 222
AREVF +MP K+ ++WN ++ YV G DSKS E+++ + G +
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKG---------DSKSCVEILNRMIIEGTRPSQTT 311
Query: 223 --KMLGAARKLFDKMH--------VRDVVSWN-----TMISGYAQDGDMSQAKNLFDQSP 267
+L A + + +H +R VV+ + ++I Y + G+ + A+ +F ++
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ 371
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARE 323
+W M+S Y+ G +A +DQM + + +++ +++ Q ++ ++
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 324 LFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
+ ++ + + +++ Y + G+ +A ++F+ +P++D VSW +IS Y G
Sbjct: 432 IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQ 491
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV-VKTGYETGCFVGN 438
EAL F E+++ G + T LS C ++ G + Q+ K G E +
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 439 ALLGMYFKCGSIGEANDVFEGIEE 462
++ + + G + EA ++ + E
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQTPE 575
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 161/404 (39%), Gaps = 92/404 (22%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISG--------- 94
++ + D+ WN VIS ++G + AL +F M +SVS IS
Sbjct: 167 EMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 95 -----------------YLRNAR---------FSLARDLFDKMPQRDLVSWNVMLTGYVR 128
Y+ +A +AR++F KMP++ LV+WN M+ GYV
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 129 NRRLGDARRLFDSM---------PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
GD++ + + P + ++ M ++N + H I
Sbjct: 287 K---GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN------------LLHGKFI 331
Query: 180 SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
+G + V N I C L D + K A +F K
Sbjct: 332 --HGYVIRSVVNADIYVNCSLIDL---------------YFKCGEANLAETVFSKTQKDV 374
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEAR---- 291
SWN MIS Y G+ +A ++DQ DV T+T+++ Q L++ +
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 292 TFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQ 351
+ + + +E+ +A++ Y + A +F ++P ++V SW MI+ YG +G +
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPRE 494
Query: 352 ARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
A FD M + D V+ A++S G +E L F +++
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYAR 477
K +H +++ G + +L+ +YF C A VFE + DV WN++++GY++
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 478 HGFGKQALMVFESMKTIGV-KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSS 536
+ L VF+ + + PD T V+ A + L G E+ M V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGAL---GREFLGRMIHTLVVKSG- 137
Query: 537 KHYTC-------MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 589
Y C ++ + + E + + MP E ASW ++ G EK
Sbjct: 138 --YVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFYQSGE---AEK 191
Query: 590 AAEMVFKM-----EPHNSGMYVLLS 609
A E+ +M EP++ + V +S
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAIS 216
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 266/488 (54%), Gaps = 23/488 (4%)
Query: 210 ISWNCLMGGFVKRKMLGAARK----LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
++N + K + +G R LF RDV +++I YA+ G + A+ LFD+
Sbjct: 133 FTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDE 192
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMA 321
+D +W +M+SGY + G +A F +M ++ +E + +M+ +
Sbjct: 193 ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG 252
Query: 322 RELFEAMPSRNV--SSW--NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQT 377
R L E ++ + S++ + +I+ YG+ GD+ AR++F+ M ++D V+W A+I+ Y+Q
Sbjct: 253 RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQN 312
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G EA +F E+++ G S + T S LS C + ALELGKQI + + +V
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVA 372
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 497
L+ MY KCG + EA VFE + K+ +WN MI YA G K+AL++F+ M V
Sbjct: 373 TGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVP 429
Query: 498 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 557
P +IT +GVLSAC HAGL+ +G YF+ M+ + + P +HYT +IDLL RAG L+EA +
Sbjct: 430 PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWE 489
Query: 558 LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM-EPHNSGMYVLLSNLYAASG 616
M P +P A+LGA + + EKA M+ +M E N+G YV+ SN+ A
Sbjct: 490 FMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMK 549
Query: 617 RWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVG----DCFHPEKDRIYAFLEELD 672
W ++ MR+ MRD GV K G SW+E++ ++ +F G C + ++ L E
Sbjct: 550 MWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVE-- 607
Query: 673 LKMRREGY 680
+M+RE Y
Sbjct: 608 -EMKRERY 614
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 186/366 (50%), Gaps = 11/366 (3%)
Query: 229 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 288
R++ +M + V N +I + GD + + LF + + +++ M+ G
Sbjct: 54 RQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDH 113
Query: 289 EAR-TFFDQMP----QKNEISYNAMVAGYVQSNKMDMARE----LFEAMPSRNVSSWNTM 339
EA + + +M + ++ +YN + + ++ + R LF+ R+V +++
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
I Y + G + ARKLFD + +RD VSW ++ISGY++ G+ ++A+++F +++ +G +
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
T L C+ + L G+ + + F+G+ L+ MY KCG + A VF
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
+ +KD V+W MI Y+++G +A +F M+ GV PD T+ VLSAC G ++ G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 520 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASR 579
+ + + S+ + T ++D+ G+ GR+EEA + MP + A+W A++ A
Sbjct: 354 KQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-ATWNAMITAYA 411
Query: 580 IHGNTE 585
G+ +
Sbjct: 412 HQGHAK 417
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 183/373 (49%), Gaps = 36/373 (9%)
Query: 49 VKDPDLLKWNKVIS--THMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS 102
++P+ +N +I T+ N H ++AL ++ M + +YN + +
Sbjct: 91 TEEPNHYSFNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 103 LARD----LFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+ R LF +RD+ + ++ Y + ++G AR+LFD + ++D VSWN+M+SGY+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC 214
+ GYA +A ++F +M + + + +L A H G + RL + + + I +
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLST 268
Query: 215 LMGG-----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ---- 265
+G + K L +AR++F++M +D V+W MI+ Y+Q+G S+A LF +
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 266 --SPHQDVFTWTAMVSGYVQNGMLD---EARTFFDQMP-QKNEISYNAMVAGYVQSNKMD 319
SP D T + ++S G L+ + T ++ Q N +V Y + +++
Sbjct: 329 GVSP--DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVE 386
Query: 320 MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM--PQRDCVSWAAIISGYAQT 377
A +FEAMP +N ++WN MIT Y G +A LFD M P D +++ ++S
Sbjct: 387 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHA 445
Query: 378 GHYEEALNMFIEI 390
G + F E+
Sbjct: 446 GLVHQGCRYFHEM 458
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 40/188 (21%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----- 112
+K+IS + + G DSA RVFN M ++ V++ AMI+ Y +N + S A LF +M
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 113 ----------------------------------QRDLVSWNVMLTGYVRNRRLGDARRL 138
Q ++ ++ Y + R+ +A R+
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP-HKNAISWNGLLAAYVHNGRIEEA 197
F++MP K+ +WNAM++ YA G+A EA +F +M + I++ G+L+A VH G + +
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQG 451
Query: 198 CRLFDSKS 205
CR F S
Sbjct: 452 CRYFHEMS 459
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 263/465 (56%), Gaps = 12/465 (2%)
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------DQSPHQDVFTWTAMVSGY 281
A +F +++ ++ WNT+I G+++ A ++F S T+ ++ Y
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 282 VQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN 337
+ G + R + ++ + N M+ YV + A +F M +V +WN
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 338 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+MI G+ + G I QA+ LFD MPQR+ VSW ++ISG+ + G +++AL+MF E++
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 398 NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+ T L+ CA + A E G+ IH +V+ +E V AL+ MY KCG I E +VF
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
E +K + WN+MI G A +GF ++A+ +F ++ G++PD ++ +GVL+AC+H+G +
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGA 577
R E+F M + Y + PS KHYT M+++LG AG LEEA+ L++NMP E W +LL A
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 578 SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 637
R GN E+ ++AA+ + K++P + YVLLSN YA+ G + +A R M++ ++K
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Query: 638 GYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL--DLKMRREGY 680
G S +EV ++H+F HP+ IY+ L+ L D+ + G+
Sbjct: 497 GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGF 541
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 170/372 (45%), Gaps = 50/372 (13%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTM--------PRRSSVSYNAMISGYLRNARF 101
K+P WN +I R+ + A+ +F M P+R ++Y ++ Y R
Sbjct: 87 KNP--FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFKAY---GRL 139
Query: 102 SLARD-------LFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAML 154
ARD + + + D N ML YV L +A R+F M DVV+WN+M+
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 155 SGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC 214
G+A+ G D+A+ +F +MP +N +SWN +++ +V NGR ++A +F + ++
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP--- 256
Query: 215 LMGGFVKRKMLGAARKL--------FDKMHVRDVVSWNT-----MISGYAQDGDMSQAKN 261
GF +L A L + VR+ N+ +I Y + G + + N
Sbjct: 257 --DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNK 317
+F+ +P + + W +M+ G NG + A F ++ + + +S+ ++ S +
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 318 MDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAII 371
+ A E F M + ++ + M+ G G + +A L MP + D V W++++
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Query: 372 SGYAQTGHYEEA 383
S + G+ E A
Sbjct: 435 SACRKIGNVEMA 446
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN---DVFEGIEEKDVVSWNTMIAGY 475
KQIH ++KTG + + +L F C S + N VF I K+ WNT+I G+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLA--FCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 476 ARHGFGKQALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
+R F + A+ +F M + VKP +T V A G G + + M +
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ-LHGMVIKEGLE 158
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
S M+ + G L EA + M +W +++ G L ++A +
Sbjct: 159 DDSFIRNTMLHMYVTCGCLIEAWRIFLGM-IGFDVVAWNSMIMGFAKCG---LIDQAQNL 214
Query: 594 VFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 646
+M N + + + + +GR+ DA +M M++ V K G++ V + N
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV-KPDGFTMVSLLN 266
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 219/361 (60%), Gaps = 1/361 (0%)
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
DVF +V+ Y ++G + AR D+MP ++ +S+N++++ Y++ +D AR LF+ M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
RNV SWN MI+GY G + +A+++FD MP RD VSW A+++ YA G Y E L +F +
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 390 IKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
+ D E + T LS CA + +L G+ +H + K G E F+ AL+ MY KCG
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 449 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
I +A +VF ++DV +WN++I+ + HG GK AL +F M G KP+ IT +GVLS
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 509 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPA 568
AC+H G++D+ + F M+ Y V P+ +HY CM+DLLGR G++EEA++L+ +P + +
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 569 ASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
+LLGA + G E E+ A + ++ +S Y +SNLYA+ GRW + R M
Sbjct: 474 ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Query: 629 R 629
R
Sbjct: 534 R 534
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 187/372 (50%), Gaps = 28/372 (7%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ N +++ + R+G+ + A +V + MP R +VS+N+++S YL AR LFD+M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQ 172
+R++ SWN M++GY + +A+ +FDSMP +DVVSWNAM++ YA G +E EVF +
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 173 M-----PHKNAISWNGLLAAYVHNGRIEEA--CRLFDSKSDWELISW--NCLMGGFVKRK 223
M + + +L+A G + + ++ K E+ + L+ + K
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVS 279
+ A ++F RDV +WN++IS + G A +F + ++ T+ ++S
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 280 GYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
GMLD+AR F+ M + Y MV + K++ A EL +P+ S
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 335 S-WNTMITGYGQNGDIAQARKLFDMMPQ---RDCVSWAAIISGYAQTGHYEEALNMFIEI 390
+++ + G + QA ++ + + + RD +A + + YA G +E+ I+
Sbjct: 474 ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV----IDG 529
Query: 391 KRD--GESLNRS 400
+R+ E +NRS
Sbjct: 530 RRNMRAERVNRS 541
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 44/202 (21%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++++ ++ WN +IS + G A VF++MP R VS+NAM++ Y ++ ++
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 108 FDKMPQRD--------LVS---------------W-----------------NVMLTGYV 127
F+KM LVS W ++ Y
Sbjct: 291 FNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYS 350
Query: 128 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNG 183
+ ++ A +F + ++DV +WN+++S + +G +A E+F +M ++ N I++ G
Sbjct: 351 KCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIG 410
Query: 184 LLAAYVHNGRIEEACRLFDSKS 205
+L+A H G +++A +LF+ S
Sbjct: 411 VLSACNHVGMLDQARKLFEMMS 432
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYF---KCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
+Q H ++KTG F + L+ + ++ A+ + I + + N++I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
A + AL VF M V PD+ + VL AC+ + G + K VT
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
T ++++ GR+G E A+ ++ MP A SW +LL A G L ++A +
Sbjct: 176 FVENT-LVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSAYLEKG---LVDEARALFD 230
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM--RDVGV--QKVTGYSWVEVQNKI 648
+ME N + + + YAA+G +A + M RDV VT Y+ V N++
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEV 287
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 276/514 (53%), Gaps = 23/514 (4%)
Query: 151 NAMLSGYAQNGYA-DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 209
N++LS Y + G E R VF K+AISW +++ YV +A +F + L
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 210 ISWNCLMGGFVKR-KMLGAAR--KLFDKMHVRDVVSWNTMISG-----YAQDGDMSQAKN 261
+ + VK LG R + F + + WN IS Y + + A+
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS-----N 316
+FD+ P DV WTA++S + +N + +EA F M + + + G V +
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 317 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
++ +E+ + + NV ++++ YG+ G + +AR++F+ M +++ VSW+A++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYET 432
GY Q G +E+A IEI R+ E + F L CA +AA+ LGK+IHGQ V+ G
Sbjct: 340 GYCQNGEHEKA----IEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK 492
V +AL+ +Y K G I A+ V+ + +++++WN M++ A++G G++A+ F M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
G+KPD I+ + +L+AC H G++D G YF M K Y + P ++HY+CMIDLLGRAG
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 553 EEAQDLMRNMPFEPPAASWGALLGASRIHGN-TELGEKAAEMVFKMEPHNSGMYVLLSNL 611
EEA++L+ A+ WG LLG + + + + E+ A+ + ++EP YVLLSN+
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNM 575
Query: 612 YAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQ 645
Y A GR DA N+R M GV K G SW++
Sbjct: 576 YKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 195/422 (46%), Gaps = 23/422 (5%)
Query: 75 RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN-RRLG 133
RVF+ + ++S+ +M+SGY+ A ++F +M L + L+ V+ LG
Sbjct: 118 RVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELG 177
Query: 134 DAR--RLFDSMPQKDVVSWNAMLSG-----YAQNGYADEAREVFYQMPHKNAISWNGLLA 186
+ R R F + WN +S Y N +AR VF +MP + I W +L+
Sbjct: 178 EVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLS 237
Query: 187 AYVHNGRIEEACRLFDSKSDWELI-----SWNCLMGGFVKRKMLGAARKLFDKMHVR--- 238
A+ N EEA LF + + + ++ ++ + L +++ K+
Sbjct: 238 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG 297
Query: 239 -DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
+VV ++++ Y + G + +A+ +F+ ++ +W+A++ GY QNG ++A F +M
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 298 PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQAR 353
+K+ + ++ + + +E+ R NV + +I YG++G I A
Sbjct: 358 EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
+++ M R+ ++W A++S AQ G EEA++ F ++ + G + +F L+ C
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 414 ALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTM 471
++ G+ + K+ G + G + ++ + + G EA ++ E E D W +
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 472 IA 473
+
Sbjct: 538 LG 539
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
+ G EA+ + ++ L TC + + G Q H VVK+G ET
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 436 VGNALLGMYFKCG-SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
VGN+LL +YFK G + E VF+G KD +SW +M++GY +AL VF M +
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 495 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 554
G+ +E T+ + ACS G + G F+ + + + + + L G +
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 555 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
A+ + MP EP W A+L A +L E+A + + M
Sbjct: 217 ARRVFDEMP-EPDVICWTAVLSA---FSKNDLYEEALGLFYAM 255
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 253/434 (58%), Gaps = 17/434 (3%)
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSG 280
L AR++FD++ + ++N MISGY + G + + L + + D +T + ++
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 281 YVQNGM----------LDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPS 330
G L AR + + +++ A+V YV+S K++ AR +FE M
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDV-ELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY-EEALNMFIE 389
NV +MI+GY G + A ++F+ +D V + A++ G++++G + +++M+I
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
++R G N STF+ + C+ + + E+G+Q+H Q++K+G T +G++LL MY KCG
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
I +A VF+ ++EK+V SW +MI GY ++G ++AL +F MK ++P+ +T +G LSA
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 510 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
CSH+GL+D+G E F SM +DYS+ P +HY C++DL+GRAG L +A + R MP P +
Sbjct: 384 CSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD 443
Query: 570 SWGALLGASRIHGNTELGEKAAEMVFKMEP-HNSGMYVLLSNLYAASGRWADAGNMRSRM 628
W ALL + +HGN EL AA +FK+ G Y+ LSN+YA++ +W + +R M
Sbjct: 444 IWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVM 503
Query: 629 RDVGVQKVTGYSWV 642
+ + K G SW
Sbjct: 504 KRRRISKTIGRSWT 517
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 187/399 (46%), Gaps = 71/399 (17%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLR-------------- 97
PDL K++ H++ G A +VF+ +P+ + +YN MISGYL+
Sbjct: 67 PDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM 126
Query: 98 -------------------NAR-------FSLARDLFDKMPQRDLVSWNVMLTG----YV 127
N+R SL R + ++ + D+ +V++T YV
Sbjct: 127 SYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYV 186
Query: 128 RNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA 187
++ +L AR +F++M ++VV +M+SGY G+ ++A E+F K+ + +N ++
Sbjct: 187 KSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEG 246
Query: 188 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD-----KMHVRDVVS 242
+ +G E A R D + ++ + F ++GA L ++H + + S
Sbjct: 247 FSRSG--ETAKRSVDMYISMQRAGFHPNISTFA--SVIGACSVLTSHEVGQQVHAQIMKS 302
Query: 243 --------WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
++++ YA+ G ++ A+ +FDQ ++VF+WT+M+ GY +NG +EA F
Sbjct: 303 GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELF 362
Query: 295 DQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQ 345
+M + N +++ ++ S +D E+FE+M + + ++ G+
Sbjct: 363 TRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGR 422
Query: 346 NGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEA 383
GD+ +A + MP+R D WAA++S G+ E A
Sbjct: 423 AGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 182/390 (46%), Gaps = 48/390 (12%)
Query: 77 FNTMPRR---SSVSYNAMISGYLR--------NARFSLARDLFDKMPQRDLVSWNVMLTG 125
++T P + SS+S I+G L+ A + D+ Q DL +L
Sbjct: 19 YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLIL 78
Query: 126 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISW 181
+++ L AR++FD +P+ + ++N M+SGY ++G E + +M + + +
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 182 NGLLAAYVHNGRI----EEACRLFDS---KSDWEL--ISWNCLMGGFVKRKMLGAARKLF 232
+ +L A G CRL + K D EL + L+ +VK L +AR +F
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 233 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEART 292
+ M +VV +MISGY G + A+ +F+ + +D+ + AMV G+ ++G + A+
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG--ETAKR 256
Query: 293 FFDQMPQKNEISYNAMVAGY---------VQSNKM--DMARELFEAMPSRNVSSWNTMIT 341
D ++ ++ + + S+++ + ++ ++ ++ ++++
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 342 GYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 401
Y + G I AR++FD M +++ SW ++I GY + G+ EEAL +F +K N T
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 402 FSCALSTCADIAALELGKQIHGQVVKTGYE 431
F ALS C+ H +V GYE
Sbjct: 377 FLGALSACS-----------HSGLVDKGYE 395
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 159/325 (48%), Gaps = 26/325 (8%)
Query: 95 YLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD----ARRLFDSMPQKDVVSW 150
+L+ S AR +FD++P+ L ++N M++GY+++ + + +R+ S + D +
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 151 NAMLSGYAQNGYADEAREVFYQMPHKNAISWN---------GLLAAYVHNGRIEEACRLF 201
+ +L G ++ H I + L+ YV +G++E A +F
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 202 DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK- 260
++ D ++ ++ G++ + + A ++F+ V+D+V +N M+ G+++ G+ ++
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSV 258
Query: 261 ----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGY 312
++ H ++ T+ +++ + + Q+ + ++ ++++ Y
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 313 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWA 368
+ ++ AR +F+ M +NV SW +MI GYG+NG+ +A +LF M + + V++
Sbjct: 319 AKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 369 AIISGYAQTGHYEEALNMFIEIKRD 393
+S + +G ++ +F ++RD
Sbjct: 379 GALSACSHSGLVDKGYEIFESMQRD 403
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 166/363 (45%), Gaps = 34/363 (9%)
Query: 63 THMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVM 122
H R CD L V A++ Y+++ + AR +F+ M ++V M
Sbjct: 162 VHARIIKCDVEL---------DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSM 212
Query: 123 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNG-YADEAREVFYQMP----HKN 177
++GY+ + DA +F++ KD+V +NAM+ G++++G A + +++ M H N
Sbjct: 213 ISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPN 272
Query: 178 AISWNGLLAA----YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
++ ++ A H + ++ S + + L+ + K + AR++FD
Sbjct: 273 ISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD 332
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDE 289
+M ++V SW +MI GY ++G+ +A LF + + T+ +S +G++D+
Sbjct: 333 QMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 290 ARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSRNVSS-WNTMITGY 343
F+ M + + Y +V ++ ++ A E AMP R S W +++
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 344 GQNGDIA----QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA--LNMFIEIKRDGESL 397
+G++ A +LF + + ++ A+ + YA ++ + ++ +R +++
Sbjct: 453 NLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Query: 398 NRS 400
RS
Sbjct: 513 GRS 515
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 65/313 (20%)
Query: 347 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 406
G ++ AR++FD +P+ ++ +ISGY + G +E L + + GE + T S L
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 407 STCAD-----IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
I L + +H +++K E + AL+ Y K G + A VFE ++
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
+++VV +MI+GY GF + A +F + K
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKV---------------------------- 234
Query: 522 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL-EEAQDL---MRNMPFEPPAASWGALLGA 577
KD V Y M++ R+G + + D+ M+ F P +++ +++GA
Sbjct: 235 ------KDIVV------YNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 578 SRIHGNTELGEKAAEMVFKMEPHNSGMYV------LLSNLYAASGRWADAGNMRSRMRDV 631
+ + E+G++ + K SG+Y L ++YA G DA + +M++
Sbjct: 283 CSVLTSHEVGQQVHAQIMK-----SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Query: 632 GVQKVTGYSWVEV 644
V +SW +
Sbjct: 338 NV-----FSWTSM 345
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 390 IKRDGESLNRSTF-SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
+K++ SL+ + + + AL + A + GK+IH ++KTG++ + LL ++ KCG
Sbjct: 24 LKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCG 83
Query: 449 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
+ A VF+ + + + ++N MI+GY +HG K+ L++ + M G K D T+ VL
Sbjct: 84 CLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLK 143
Query: 509 ACSHAG---LIDRG-TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 564
A + G ++ R ++ V T ++D ++G+LE A+ + M
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 565 E 565
E
Sbjct: 204 E 204
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 272/500 (54%), Gaps = 48/500 (9%)
Query: 185 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV---- 240
L ++ + I A ++FD + ++IS ++G FVK A + F ++ +
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 241 VSWNTMISGYAQDGDMSQAKNL----FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
++ T+I D+ K L +VF +A+++ YV+ L +AR F
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCF-- 151
Query: 297 MPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 356
D R+ NV S +I+GY + + +A LF
Sbjct: 152 ----------------------DDTRD-------PNVVSITNLISGYLKKHEFEEALSLF 182
Query: 357 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL-NRSTFSCALSTCADIAAL 415
MP+R V+W A+I G++QTG EEA+N F+++ R+G + N STF CA++ ++IA+
Sbjct: 183 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 242
Query: 416 ELGKQIHGQVVK-TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE--KDVVSWNTMI 472
GK IH +K G FV N+L+ Y KCG++ ++ F +EE +++VSWN+MI
Sbjct: 243 GAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 302
Query: 473 AGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 531
GYA +G G++A+ +FE M K ++P+ +T++GVL AC+HAGLI G YF DY
Sbjct: 303 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 362
Query: 532 VTPSS---KHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
P+ +HY CM+D+L R+GR +EA++L+++MP +P W ALLG +IH N L +
Sbjct: 363 -DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAK 421
Query: 589 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 648
AA + +++P + YV+LSN Y+A W + +R +M++ G+++ TG SW+EV+++I
Sbjct: 422 LAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQI 481
Query: 649 HKFTVGDCFHPEKDRIYAFL 668
F D + KD +Y L
Sbjct: 482 RVFVNADKNNELKDEVYRML 501
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 183/413 (44%), Gaps = 31/413 (7%)
Query: 123 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNA 178
L ++ + + +A ++FD +P+ DV+S A++ + + EA + F ++ N
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 179 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG-----FVKRKMLGAARKLFD 233
++ ++ + + ++ +L L S N +G +VK L AR+ FD
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLAS-NVFVGSAVLNCYVKLSTLTDARRCFD 152
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEA-RT 292
+VVS +ISGY + + +A +LF P + V TW A++ G+ Q G +EA T
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 293 FFDQMPQ----KNEISYNAMVAGYVQSNKMDMAREL----FEAMPSR-NVSSWNTMITGY 343
F D + + NE ++ + + + + + R NV WN++I+ Y
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 344 GQNGDIAQARKLFDMM--PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRS 400
+ G++ + F+ + QR+ VSW ++I GYA G EEA+ MF ++ +D N
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNV 332
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG----NALLGMYFKCGSIGEANDV 456
T L C ++ G + V Y+ + ++ M + G EA ++
Sbjct: 333 TILGVLFACNHAGLIQEGYMYFNKAV-NDYDDPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 457 FEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
+ + + + W ++ G H + L + K + + P +++ +LS
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIH--SNKRLAKLAASKILELDPRDVSSYVMLS 442
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 157/323 (48%), Gaps = 32/323 (9%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
+A+++ Y++ + + AR FD ++VS +++GY++ +A LF +MP++ VV
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 149 SWNAMLSGYAQNGYADEAREVFYQM-------PHKN----AISWNGLLAAYVHNGRIEEA 197
+WNA++ G++Q G +EA F M P+++ AI+ +A++ G+ A
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH-GAGKSIHA 250
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM--HVRDVVSWNTMISGYAQDGD 255
C + + + WN L+ + K + + F+K+ R++VSWN+MI GYA +G
Sbjct: 251 CAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR 310
Query: 256 MSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKNEIS 304
+A +F D + + T ++ G++ E +F++ P E+
Sbjct: 311 GEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELE 370
Query: 305 -YNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITG--YGQNGDIAQ--ARKLFDM 358
Y MV +S + A EL ++MP + W ++ G N +A+ A K+ ++
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILEL 430
Query: 359 MPQRDCVSWAAIISGYAQTGHYE 381
P RD S+ + + Y+ +++
Sbjct: 431 DP-RDVSSYVMLSNAYSAMENWQ 452
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 136/314 (43%), Gaps = 30/314 (9%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
V++ +++ A R F+ + VS +ISGYL+ F A LF MP+R +V+W
Sbjct: 134 VLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTW 193
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWN--------AMLSGYAQNGYADEAREVFY 171
N ++ G+ + R +A F M ++ VV N +S A +G
Sbjct: 194 NAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAI 253
Query: 172 QMPHK--NAISWNGLLAAYVHNGRIEEACRLFDSKSDWE--LISWNCLMGGFVKRKMLGA 227
+ K N WN L++ Y G +E++ F+ + + ++SWN ++ G+
Sbjct: 254 KFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEE 313
Query: 228 ARKLFDKMHVRDV-----------VSWNTMISGYAQDGDM--SQAKNLFDQSPHQDVFTW 274
A +F+KM V+D V + +G Q+G M ++A N +D ++ +
Sbjct: 314 AVAMFEKM-VKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY 372
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISY-NAMVAG-YVQSNK--MDMARELFEAMPS 330
MV ++G EA MP I + A++ G + SNK +A +
Sbjct: 373 ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDP 432
Query: 331 RNVSSWNTMITGYG 344
R+VSS+ + Y
Sbjct: 433 RDVSSYVMLSNAYS 446
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 262/479 (54%), Gaps = 14/479 (2%)
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------ 265
WN L+ +++ G A K+F +M DV S+N MI GYA+ G +A L+ +
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ----MPQKNEISYNAMVAGYVQSNKMDMA 321
P + + G++ + L + + + + N I NA++ Y + + +A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
+ F+AM +++ SWNTM+ G+ + GD+ A+ +FD MP+RD VSW +++ GY++ G +
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 382 EAL-NMFIEIK-RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
+ +F E+ + +R T +S A+ L G+ +HG V++ + F+ +A
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSA 408
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
L+ MY KCG I A VF+ EKDV W +MI G A HG G+QAL +F M+ GV P+
Sbjct: 409 LIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPN 468
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM 559
+T++ VL+ACSH+GL++ G F M + P ++HY ++DLL RAGR+EEA+D++
Sbjct: 469 NVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIV 528
Query: 560 -RNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 618
+ MP P + WG++L A R + E E A + K+EP G YVLLSN+YA GRW
Sbjct: 529 QKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRW 588
Query: 619 ADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD-CFHPEKDRIYAFLEELDLKMR 676
+ R M + GV+K GYS V +H+F + HP I L+ L +M+
Sbjct: 589 GYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 179/366 (48%), Gaps = 31/366 (8%)
Query: 119 WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 174
WN ++ Y+ G A ++F MP DV S+N M+ GYA+ G++ EA +++++M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 175 HKNAISWNGLLAAYVH----------NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 224
+ + LL H +G IE ++ S LI N L+ + K K
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN----LILSNALLDMYFKCKE 284
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 284
G A++ FD M +D+ SWNTM+ G+ + GDM A+ +FDQ P +D+ +W +++ GY +
Sbjct: 285 SGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKK 344
Query: 285 GMLDE--ARTFFDQMP-----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS-- 335
G D+ R F +M + + ++ ++++G + ++ R + + +
Sbjct: 345 G-CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 336 --WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
+ +I Y + G I +A +F ++D W ++I+G A G+ ++AL +F ++ +
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEE 463
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVV-KTGYETGCFVGNALLGMYFKCGSIGE 452
G + N T L+ C+ +E G + + K G++ +L+ + + G + E
Sbjct: 464 GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 453 ANDVFE 458
A D+ +
Sbjct: 524 AKDIVQ 529
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 88 YNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----- 142
+N+++ Y+ F +A +F +MP D+ S+NVM+ GY + +A +L+ M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 143 -PQKDVVSWNAMLSGYAQN--------GYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 193
P + V + G+ + G+ + V+ N I N LL Y
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY----SSNLILSNALLDMYFKCKE 284
Query: 194 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 253
A R FD+ ++ SWN ++ GFV+ + AA+ +FD+M RD+VSWN+++ GY++
Sbjct: 285 SGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKK 344
Query: 254 G-DMSQAKNLF-----DQSPHQDVFTWTAMVSGYVQNGMLDEAR----TFFDQMPQKNEI 303
G D + LF + D T +++SG NG L R + +
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF 404
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR- 362
+A++ Y + ++ A +F+ ++V+ W +MITG +G+ QA +LF M +
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Query: 363 ---DCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+ V+ A+++ + +G EE L++F +K
Sbjct: 465 VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 32/320 (10%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
NA++ Y + LA+ FD M ++D+ SWN M+ G+VR + A+ +FD MP++D+V
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 149 SWNAMLSGYAQNGYADE-AREVFYQMP-----HKNAISWNGLLAAYVHNGRIEE------ 196
SWN++L GY++ G RE+FY+M + ++ L++ +NG +
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 197 -ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
RL K D L S L+ + K ++ A +F +DV W +MI+G A G+
Sbjct: 393 LVIRL-QLKGDAFLSS--ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 256 MSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YN 306
QA LF + + V T A+++ +G+++E F+ M K Y
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 307 AMVAGYVQSNKMDMARELFE-AMPSR-NVSSWNTMITGYGQNGDIAQAR----KLFDMMP 360
++V ++ +++ A+++ + MP R + S W ++++ DI A +L + P
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 361 QRDCVSWAAIISGYAQTGHY 380
+++ + + + YA G +
Sbjct: 570 EKEG-GYVLLSNIYATVGRW 588
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 191/470 (40%), Gaps = 96/470 (20%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSL-ARDLFDKMP--- 112
WN ++ +M G+ A +VF MP S+N MI GY + FSL A L+ KM
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG-FSLEALKLYFKMVSDG 227
Query: 113 --------------------------------------QRDLVSWNVMLTGYVRNRRLGD 134
+L+ N +L Y + + G
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
A+R FD+M +KD+ SWN M+ G+ + G + A+ VF QMP ++ +SWN LL Y G
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG-- 345
Query: 195 EEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV-----RDVVSWNTMISG 249
C D ++ R+LF +M + D V+ ++ISG
Sbjct: 346 ---C---DQRT----------------------VRELFYEMTIVEKVKPDRVTMVSLISG 377
Query: 250 YAQDGDMSQAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY 305
A +G++S + + D F +A++ Y + G+++ A F +K+ +
Sbjct: 378 AANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALW 437
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT----MITGYGQNGDIAQARKLFDMMPQ 361
+M+ G A +LF M V+ N ++T +G + + +F+ M
Sbjct: 438 TSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKD 497
Query: 362 R-----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 416
+ + + +++ + G EEA + I K+ ++S + LS C +E
Sbjct: 498 KFGFDPETEHYGSLVDLLCRAGRVEEAKD--IVQKKMPMRPSQSMWGSILSACRGGEDIE 555
Query: 417 LGKQIHGQVVKTGYET-GCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
+ +++K E G +V L +Y G G ++ E +E + V
Sbjct: 556 TAELALTELLKLEPEKEGGYV--LLSNIYATVGRWGYSDKTREAMENRGV 603
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 48/328 (14%)
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y +N D+A+ L + P + + +IS + + + E ++ + R S +R TF
Sbjct: 80 YPENLDLAKLLFL-NFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTF 136
Query: 403 SCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
+ + ++ + KQIH ++ +G G ++ N+L+ Y + G+ G A VF +
Sbjct: 137 LYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
DV S+N MI GYA+ GF +AL ++ M + G++PDE T++ +L C H I G
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 522 Y---------FYSMNKDYSVTPSSKHYTC-----------------------MIDLLGRA 549
YS N S ++ C M+ R
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 550 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE--LGEKAAEM--VFKMEPHNSGMY 605
G +E AQ + MP + SW +LL G + + E EM V K++P M
Sbjct: 314 GDMEAAQAVFDQMP-KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 606 VLLS----NLYAASGRWADAGNMRSRMR 629
L+S N + GRW +R +++
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLK 400
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 285 bits (730), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 204/715 (28%), Positives = 322/715 (45%), Gaps = 126/715 (17%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTM------PRRSSVSYNAMISGYLRNARFSLARD 106
++ W +I R G C+ AL F M P V G L+ +RF
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRG-- 194
Query: 107 LFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA 166
+ GYV L D V +++ Y + G D+A
Sbjct: 195 ----------------VHGYVVKSGLEDC-----------VFVASSLADMYGKCGVLDDA 227
Query: 167 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--KSDWE---LISWNCL-----M 216
+VF ++P +NA++WN L+ YV NG+ EEA RLF K E + CL M
Sbjct: 228 SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 217 GG-----------------------------FVKRKMLGAARKLFDKMHVRDVVSWNTMI 247
GG + K ++ A +FD+M +DVV+WN +I
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLII 347
Query: 248 SGYAQDGDMSQA-----------------------------KNL----------FDQSPH 268
SGY Q G + A +NL S
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF--- 325
D+ + ++ Y + G + +A+ FD +K+ I +N ++A Y +S A LF
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 326 --EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGH 379
E +P NV +WN +I +NG + +A+ +F M + +SW +++G Q G
Sbjct: 468 QLEGVPP-NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGN 438
EEA+ +++ G N + + ALS CA +A+L +G+ IHG +++ + + +
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 439 ALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 498
+L+ MY KCG I +A VF ++ N MI+ YA +G K+A+ ++ S++ +G+KP
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP 646
Query: 499 DEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 558
D IT+ VLSAC+HAG I++ E F + S+ P +HY M+DLL AG E+A L
Sbjct: 647 DNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706
Query: 559 MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 618
+ MPF+P A +L+ + TEL + + + + EP NSG YV +SN YA G W
Sbjct: 707 IEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSW 766
Query: 619 ADAGNMRSRMRDVGVQKVTGYSWVEV--QNKIHKFTVGDCFHPEKDRIYAFLEEL 671
+ MR M+ G++K G SW+++ + +H F D H + I L L
Sbjct: 767 DEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 242/526 (46%), Gaps = 55/526 (10%)
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC 198
F+++P K S +S + + DE Q ++ S+ +++ NG I+EA
Sbjct: 6 FNTIPNKVPFS----VSSKPSSKHHDE------QAHSPSSTSYFHRVSSLCKNGEIKEAL 55
Query: 199 RLFDSKSDWELIS-----WNCLMGGFVKRKMLGAARKLFDKM------HVRDVVSWNTMI 247
L ++ D+ + + ++ G V + L +++ ++ + R+ ++
Sbjct: 56 SLV-TEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLV 114
Query: 248 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA 307
YA+ + A+ LF + ++VF+W A++ + G+ + A F +M + NEI +
Sbjct: 115 IFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE-NEIFPD- 172
Query: 308 MVAGYVQSNKMDMARELFEAMPSRNVSSW-------------NTMITGYGQNGDIAQARK 354
+V N L + R V + +++ YG+ G + A K
Sbjct: 173 ---NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 229
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
+FD +P R+ V+W A++ GY Q G EEA+ +F ++++ G R T S LS A++
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 415 LELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAG 474
+E GKQ H + G E +G +LL Y K G I A VF+ + EKDVV+WN +I+G
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYS 531
Y + G + A+ + + M+ +K D +T+ ++SA + + G E Y + +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 532 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA 591
+ +S ++D+ + G + +A+ + + E W LL A + + L +A
Sbjct: 410 IVLAST----VMDMYAKCGSIVDAKKVF-DSTVEKDLILWNTLLAA---YAESGLSGEAL 461
Query: 592 EMVFKMEPHNSGMYVLLSNLYAAS----GRWADAGNMRSRMRDVGV 633
+ + M+ V+ NL S G+ +A +M +M+ G+
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 209/479 (43%), Gaps = 66/479 (13%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM------PRRSSVSY------------- 88
++ D + + WN ++ +++NG + A+R+F+ M P R +VS
Sbjct: 233 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 292
Query: 89 --------------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 128
++++ Y + A +FD+M ++D+V+WN++++GYV+
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 129 NRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREV-FYQMPH---KNAIS 180
+ DA + M + D V+ ++S A+ +EV Y + H + +
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 181 WNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-- 238
+ ++ Y G I +A ++FDS + +LI WN L+ + + + G A +LF M +
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 239 --DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEART 292
+V++WN +I ++G + +AK++F Q ++ +WT M++G VQNG +EA
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 293 FFDQMPQK----NEISYNAMVAGYVQSNKMDMARELF-----EAMPSRNVSSWNTMITGY 343
F +M + N S ++ + + R + S VS +++ Y
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMY 592
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ GDI +A K+F + A+IS YA G+ +EA+ ++ ++ G + T +
Sbjct: 593 AKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITIT 652
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
LS C + +I +V C L M S GE IEE
Sbjct: 653 NVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGL--MVDLLASAGETEKALRLIEE 709
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 216/367 (58%), Gaps = 4/367 (1%)
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
N ++ Y AR+LF+ MP +N+ +WN+++ Y ++GD+ AR +FD M +RD V
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGES-LNRSTFSCALSTCADIAALELGKQIHGQ 424
+W+++I GY + G Y +AL +F ++ R G S N T + CA + AL GK +H
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVF--EGIEEKDVVSWNTMIAGYARHGFGK 482
++ + +L+ MY KCGSIG+A VF ++E D + WN +I G A HGF +
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 483 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCM 542
++L +F M+ + PDEIT + +L+ACSH GL+ +F S+ K+ P S+HY CM
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACM 385
Query: 543 IDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS 602
+D+L RAG +++A D + MP +P + GALL HGN EL E + + +++PHN
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 603 GMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKD 662
G YV L+N+YA + ++ A +MR M GV+K+ G+S +++ H+F D H D
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 505
Query: 663 RIYAFLE 669
+IYA L+
Sbjct: 506 KIYAVLQ 512
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 148/316 (46%), Gaps = 27/316 (8%)
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
AR LFD+MP ++LV+WN +L Y ++ + AR +FD M ++DVV+W++M+ GY + G
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 164 DEAREVFYQM-----PHKNAISWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNC 214
++A E+F QM N ++ ++ A H G + + D +I
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 215 LMGGFVKRKMLGAARKLFDKMHVR--DVVSWNTMISGYAQDGDMSQAKNLF----DQSPH 268
L+ + K +G A +F + V+ D + WN +I G A G + ++ LF +
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAMVAGYVQSNKMDMARE 323
D T+ +++ G++ EA FF + + K+E Y MV ++ + A +
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSE-HYACMVDVLSRAGLVKDAHD 400
Query: 324 LFEAMPSRNVSS-WNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTG 378
MP + S ++ G +G++ A +KL ++ P D + + + YA
Sbjct: 401 FISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDG-RYVGLANVYAINK 459
Query: 379 HYEEALNMFIEIKRDG 394
+ A +M +++ G
Sbjct: 460 QFRAARSMREAMEKKG 475
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 157/365 (43%), Gaps = 32/365 (8%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRV------FNTMPRRSSVSYNAMISGYLRNARF- 101
+ DP WN VI + + + ++ V F +P + + S L N +
Sbjct: 68 LSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLG 127
Query: 102 -SLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
SL + + DL N ++ Y R AR+LFD MP K++V+WN++L YA++
Sbjct: 128 GSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 187
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--------KSDWELISW 212
G AR VF +M ++ ++W+ ++ YV G +A +FD ++ ++S
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 213 NCL---MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP-- 267
C +G + K + R + D V+ ++I YA+ G + A ++F ++
Sbjct: 248 ICACAHLGALNRGKTV--HRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 323
D W A++ G +G + E+ F +M + +EI++ ++A + A
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 324 LFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVS-WAAIISGYAQTG 378
F+++ + M+ + G + A MP + S A+++G G
Sbjct: 366 FFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 379 HYEEA 383
+ E A
Sbjct: 426 NLELA 430
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
+ +GD+ A K + W +I G++ + + E++++++I++ R G +
Sbjct: 49 FSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDH 108
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
T+ + + + ++ +LG +H VVK+G E F+ N L+ MY A +F+
Sbjct: 109 MTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDE 168
Query: 460 IEEKDVVSWNTM-------------------------------IAGYARHGFGKQALMVF 488
+ K++V+WN++ I GY + G +AL +F
Sbjct: 169 MPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIF 228
Query: 489 ESMKTIG-VKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSSKHYTCMIDLL 546
+ M +G K +E+TMV V+ AC+H G ++RG T + Y ++ +T + T +ID+
Sbjct: 229 DQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ--TSLIDMY 286
Query: 547 GRAGRLEEAQDLM-RNMPFEPPAASWGALLGASRIHG 582
+ G + +A + R E A W A++G HG
Sbjct: 287 AKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 184/645 (28%), Positives = 310/645 (48%), Gaps = 63/645 (9%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR--- 114
N VIS ++ A +VF+ M R+ V++ M+SGY + + + A +L+ +M
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 115 -------------------------------------DLVSWNVMLTGYVRNRRLGDARR 137
D+V N ++ YV+N RL +A
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 197
F + + SWN ++SGY + G DEA +F++MP N +SWN L++ +V G
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRAL 223
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS--------WNTMISG 249
L + + ++ L G +K G + ++H V S + +I
Sbjct: 224 EFLVRMQREGLVLDGFALPCG-LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDM 282
Query: 250 YAQDGDMSQAKNLFDQ---SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI--S 304
Y+ G + A ++F Q + + V W +M+SG++ N + A Q+ Q + S
Sbjct: 283 YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDS 342
Query: 305 YNAMVAGYVQSNKMDMARELFEAMPSRNVSSW-------NTMITGYGQNGDIAQARKLFD 357
Y A + N +++ R + VS + + ++ + G+I A KLF
Sbjct: 343 YTLSGALKICINYVNL-RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFH 401
Query: 358 MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 417
+P +D ++++ +I G ++G A +F E+ + G ++ S L C+ +A+L
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGW 461
Query: 418 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 477
GKQIHG +K GYE+ AL+ MY KCG I +F+G+ E+DVVSW +I G+ +
Sbjct: 462 GKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 478 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
+G ++A F M IG++P+++T +G+LSAC H+GL++ +M +Y + P +
Sbjct: 522 NGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLE 581
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
HY C++DLLG+AG +EA +L+ MP EP W +LL A H N L AE + K
Sbjct: 582 HYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKG 641
Query: 598 EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 642
P + +Y LSN YA G W +R + +G ++ +G SW+
Sbjct: 642 FPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 186/430 (43%), Gaps = 59/430 (13%)
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
V Q +N N +++ YV + +A ++FD S+ +++W ++ G+ A
Sbjct: 31 VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKA 90
Query: 229 RKLFDKM-----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVS 279
+L+ +M + ++ ++ GD+ ++++ + DV ++V
Sbjct: 91 IELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVD 150
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 339
YV+NG L EA + F ++ + + S+N +++GY ++ MD A LF MP NV SWN +
Sbjct: 151 MYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCL 210
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
I+G+ G AL + ++R+G L+
Sbjct: 211 ISGFVDKGS--------------------------------PRALEFLVRMQREGLVLDG 238
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
C L C+ L +GKQ+H VVK+G E+ F +AL+ MY CGS+ A DVF
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH- 297
Query: 460 IEEK-----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSH-- 512
+EK V WN+M++G+ + + AL + + + D T+ G L C +
Sbjct: 298 -QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYV 356
Query: 513 ---AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
GL DY V + ++DL G +++A L +P + A
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVG------SILVDLHANVGNIQDAHKLFHRLPNKDIIA 410
Query: 570 SWGALLGASR 579
G + G +
Sbjct: 411 FSGLIRGCVK 420
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 397 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 456
++ + L C + A + G+ I V+K G F+ N ++ MY + +A+ V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGL 515
F+ + E+++V+W TM++GY G +A+ ++ M + +E VL AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
I G + + K+ ++ ++D+ + GRL EA + + P + SW L+
Sbjct: 123 IQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLI 180
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 112/246 (45%), Gaps = 18/246 (7%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D + + ++ H G+ A ++F+ +P + ++++ +I G +++ SLA LF ++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 113 QRDLVSWNVMLTGYVRN----RRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYAD 164
+ L + +++ ++ LG +++ +K + V+ A++ Y + G D
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFV 220
+F M ++ +SW G++ + NGR+EEA R F + + +++ L+
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACR 555
Query: 221 KRKMLGAARKLFDKMHVRDVVS-----WNTMISGYAQDGDMSQAKNLFDQSPHQ-DVFTW 274
+L AR + M + + ++ Q G +A L ++ P + D W
Sbjct: 556 HSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIW 615
Query: 275 TAMVSG 280
T++++
Sbjct: 616 TSLLTA 621
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/701 (27%), Positives = 320/701 (45%), Gaps = 108/701 (15%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRN-------------- 98
D+ WN ++ + G A VF+ MP R VS+N MIS +R
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 99 ------ARFSLARDL-------------------FDKMPQRDLVSWNVMLTGYVRNRRLG 133
+RF+LA L +++ N +L+ Y + +
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 134 D-ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG 192
D R+F+S+ Q + VS+ A++ G A+ EA ++F M K + L+ +
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 193 RIEEACRLFDSKSDW--------------------ELISWNCLMGGFVKRKMLGAARKLF 232
E C DS S+ +L N L+ + K K + A +F
Sbjct: 251 APREGC---DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 233 DKMHVRDVVSWNTMISGYAQD-----------------------------------GDMS 257
+M +VVSWN MI G+ Q+ GD+
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Query: 258 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----EISYNAMVAGYV 313
+ +F P V W AM+SGY +EA + F QM +N + + + +++
Sbjct: 368 TGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 314 QSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGDIAQARKLFD-MMPQRDCVSWA 368
+ ++ +++ + +S + +++G Y + + + +FD + + D W
Sbjct: 428 RLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWN 487
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESL-NRSTFSCALSTCADIAALELGKQIHGQVVK 427
++ISG+ +AL +F + + N ++F+ LS+C+ + +L G+Q HG VVK
Sbjct: 488 SMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 547
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMV 487
+GY + FV AL MY KCG I A F+ + K+ V WN MI GY +G G +A+ +
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGL 607
Query: 488 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
+ M + G KPD IT V VL+ACSH+GL++ G E SM + + + P HY C++D LG
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 607
RAGRLE+A+ L P++ + W LL + R+HG+ L + AE + +++P +S YVL
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVL 727
Query: 608 LSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 648
LSN Y++ +W D+ ++ M V K G SW N +
Sbjct: 728 LSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/603 (23%), Positives = 262/603 (43%), Gaps = 130/603 (21%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N ++ Y+ AR +FD+M RD+ SWN LT + LG+A +FD MP++DVV
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMP---------------------------------- 174
SWN M+S + G+ ++A V+ +M
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 175 -----HKNAISWNGLLAAYVHNGRIEE-ACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
KN N LL+ Y G I + R+F+S S +S+ ++GG + + A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 229 RKLF----------DKMHVRDVVSW----------------------------------- 243
++F D + + +++S
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 244 ---NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-- 298
N+++ YA++ DM+ A+ +F + P +V +W M+ G+ Q D++ F +M
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 299 --QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF 356
Q NE++ +++ +S ++ R +F ++P +VS+WN M
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM----------------- 387
Query: 357 DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE 416
+SGY+ HYEEA++ F +++ +++T S LS+CA + LE
Sbjct: 388 --------------LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLE 433
Query: 417 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG-IEEKDVVSWNTMIAGY 475
GKQIHG V++T + + L+ +Y +C + + +F+ I E D+ WN+MI+G+
Sbjct: 434 GGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF 493
Query: 476 ARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
+ +AL++F M +T + P+E + VLS+CS + G ++ + K V+
Sbjct: 494 RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMV 594
S T + D+ + G ++ A+ + W ++ +G+ G++A +
Sbjct: 554 SFVE-TALTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEMIHG---YGHNGRGDEAVGLY 608
Query: 595 FKM 597
KM
Sbjct: 609 RKM 611
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 158/340 (46%), Gaps = 47/340 (13%)
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
N ++ Y++ D AR++F+ M R+V SWN +T + GD+ +A ++FD MP+RD V
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
SW +IS + G E+AL ++ + DG +R T + LS C+ + G + HG
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 426 VKTGYETGCFVGNALLGMYFKCGSIGEAN-DVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
VKTG + FVGNALL MY KCG I + VFE + + + VS+ +I G AR +A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF--------------------- 523
+ +F M GV+ D + + +LS + D +E +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 524 ---------YSMNKD-------YSVTPSSKHYTCMIDLLG-----RAGRLEEAQDLMRNM 562
Y+ NKD ++ P + I ++G R+ + E MR+
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 563 PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS 602
F+P + ++LGA G+ E G + +F P S
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRR----IFSSIPQPS 380
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 197/498 (39%), Gaps = 103/498 (20%)
Query: 144 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS 203
+ D N +L Y + G D AR+VF +M ++ SWN L G + EAC +FD
Sbjct: 38 KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDG 97
Query: 204 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
+ +++SWN ++ V++ A ++ +M V + S + +S +
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRM-----VCDGFLPSRFTLASVLSACSKVL 152
Query: 264 D-------------QSPHQDVFTWTAMVSGYVQNG-MLDEARTFFDQMPQKNEISYNAMV 309
D +++F A++S Y + G ++D F+ + Q NE+SY A++
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 310 AGYVQSNKMDMARELFEAMPSRNVSS---------------------------------- 335
G + NK+ A ++F M + V
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 336 --------------WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
N+++ Y +N D+ A +F MP+ + VSW +I G+ Q +
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
+++ ++ G N TC + L
Sbjct: 333 KSVEFLTRMRDSGFQPNE-------VTCISV----------------------------L 357
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
G F+ G + +F I + V +WN M++GY+ + ++A+ F M+ +KPD+
Sbjct: 358 GACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T+ +LS+C+ ++ G + + + ++ +S + +I + ++E ++ + +
Sbjct: 418 TLSVILSSCARLRFLEGGKQ-IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDD 476
Query: 562 MPFEPPAASWGALLGASR 579
E A W +++ R
Sbjct: 477 CINELDIACWNSMISGFR 494
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 72/212 (33%)
Query: 418 GKQIHGQVVKTGYETGCFVGNALLGMYFKC------------------------------ 447
GK IHG +V+ G ++ ++ N LL +Y +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 448 -GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
G +GEA +VF+G+ E+DVVSWN MI+ R GF ++AL+V++ M G P T+ V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 507 LSACS----------------HAGL--------------------IDRGTEYFYSMNKDY 530
LSACS GL +D G F S+++
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ-- 202
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
P+ YT +I L R ++ EA + R M
Sbjct: 203 ---PNEVSYTAVIGGLARENKVLEAVQMFRLM 231
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 189/654 (28%), Positives = 329/654 (50%), Gaps = 55/654 (8%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGY-----LRNARFSL 103
DL+ W+ ++S+ + NG ALR+F M +V+ +++ G LR AR S+
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR-SV 224
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
+ KM D N +LT Y + L + R+F+ + +K+ VSW AM+S Y + ++
Sbjct: 225 HGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFS 284
Query: 164 DEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLF------DSKSDWELISWN 213
++A F +M N ++ +L++ G I E + + ++E +S
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL- 343
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ---- 269
L+ + + L + + R++V+WN++IS YA G + QA LF Q Q
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
D FT + +S G++ P +I + + + D++ E +
Sbjct: 404 DAFTLASSISACENAGLV----------PLGKQIHGHVI--------RTDVSDEFVQ--- 442
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
N++I Y ++G + A +F+ + R V+W +++ G++Q G+ EA+++F
Sbjct: 443 -------NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDY 495
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
+ +N TF + C+ I +LE GK +H +++ +G + F AL+ MY KCG
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGD 554
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
+ A VF + + +VSW++MI Y HG A+ F M G KP+E+ + VLSA
Sbjct: 555 LNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSA 614
Query: 510 CSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA 569
C H+G ++ G +Y++++ K + V+P+S+H+ C IDLL R+G L+EA ++ MPF A+
Sbjct: 615 CGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADAS 673
Query: 570 SWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMR 629
WG+L+ RIH ++ + + + ++G Y LLSN+YA G W + +RS M+
Sbjct: 674 VWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMK 733
Query: 630 DVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSS 683
++KV GYS +E+ K+ +F G+ + D IY FL L E V S
Sbjct: 734 SSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVVDS 787
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 266/552 (48%), Gaps = 57/552 (10%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD 109
+DP L K+I ++ G DS+ VF P S Y +I + A DL+
Sbjct: 32 RDP--LPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYH 89
Query: 110 KMPQRDLVSWNVMLTGYVRN---RRLGDAR-----------RLFDSMPQKDVVSWNAMLS 155
+ LVS ++ +V R +R R+ D V ++L
Sbjct: 90 R-----LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLC 144
Query: 156 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELIS 211
Y Q G +A +VF MP ++ ++W+ L+++ + NG + +A R+F D + + ++
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 212 WNCLMGGFVKRKMLGAAR----KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
++ G + L AR ++ KM D N++++ Y++ GD+ ++ +F++
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 268 HQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVA-----GYVQSNK- 317
++ +WTAM+S Y + ++A F +M + N ++ ++++ G ++ K
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 318 ---MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
+ REL S +++ ++ Y + G ++ + ++ R+ V+W ++IS Y
Sbjct: 325 VHGFAVRRELDPNYESLSLA----LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLY 380
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
A G +AL +F ++ + T + ++S C + + LGKQIHG V++T
Sbjct: 381 AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE- 439
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
FV N+L+ MY K GS+ A+ VF I+ + VV+WN+M+ G++++G +A+ +F+ M
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 495 GVKPDEITMVGVLSACSHAGLIDRGT----EYFYSMNKDYSVTPSSKHYTCMIDLLGRAG 550
++ +E+T + V+ ACS G +++G + S KD T +ID+ + G
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD------TALIDMYAKCG 553
Query: 551 RLEEAQDLMRNM 562
L A+ + R M
Sbjct: 554 DLNAAETVFRAM 565
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 178/354 (50%), Gaps = 24/354 (6%)
Query: 238 RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
RD + +I YA G ++ +F+ P+ D F + ++ V +LD A + ++
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 298 PQKNEISYNAMVAGYVQSNKMDM---ARE-----------LFEAMPSRNVSSWNTMITGY 343
+S ++ +V + + +RE + + + +++ Y
Sbjct: 92 -----VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
GQ G+++ A K+FD MP RD V+W+ ++S + G +AL MF + DG + T
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
+ CA++ L + + +HGQ+ + ++ + N+LL MY KCG + + +FE I +K
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEY 522
+ VSW MI+ Y R F ++AL F M G++P+ +T+ VLS+C GLI G + +
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 523 FYSMNKDYSVTPSSKHYT-CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+++ ++ + P+ + + +++L G+L + + ++R + + +W +L+
Sbjct: 327 GFAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLI 377
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 136/281 (48%), Gaps = 17/281 (6%)
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
+I Y G +R +F+ P D + +I + A++++ + + ++
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99
Query: 399 RSTFSCALSTCA-DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF 457
+ F L CA L +G ++HG+++K G + + +LL MY + G++ +A VF
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVF 159
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
+G+ +D+V+W+T+++ +G +AL +F+ M GV+PD +TM+ V+ C+ G +
Sbjct: 160 DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLR 219
Query: 518 RGTEYFYSMNK---DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
+ + D T + ++ + + G L ++ + + + A SW A+
Sbjct: 220 IARSVHGQITRKMFDLDETLCNS----LLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAM 274
Query: 575 LGASRIHGNTELGEKA----AEMVFK-MEPHNSGMYVLLSN 610
+ + + E EKA +EM+ +EP+ +Y +LS+
Sbjct: 275 ISS---YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/649 (28%), Positives = 322/649 (49%), Gaps = 65/649 (10%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK--- 145
+++++ Y + + AR +F++M +RD+V W M+ Y R +G+A L + M +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 146 ---------------------------------DVVSWNAMLSGYAQNGYADEAREVFYQ 172
D+ N+ML+ Y + + +A+++F Q
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 173 MPHKNAISWNGLLAAYVHNGRIEEACRLF----------DSKSDWELISWNCLMGGFVKR 222
M ++ +SWN +++ Y G + E +L D ++ +S + M
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 223 KMLGA--ARKLFD-KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 279
+ML + FD MH++ +I+ Y + G + + + P++DV WT M+S
Sbjct: 265 RMLHCQIVKTGFDVDMHLK-----TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 280 GYVQNGMLDEARTFFDQMPQK-NEISYNAM---VAGYVQSNKMDMARELFEAMP----SR 331
G ++ G ++A F +M Q +++S A+ VA Q D+ + + +
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+ + N++IT Y + G + ++ +F+ M +RD VSW AIISGYAQ +AL +F E+K
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 392 -RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
+ + ++ T L C+ AL +GK IH V+++ V AL+ MY KCG +
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
A F+ I KDVVSW +IAGY HG G AL ++ G++P+ + + VLS+C
Sbjct: 500 EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
SH G++ +G + F SM +D+ V P+ +H C++DLL RA R+E+A + P
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDV 619
Query: 571 WGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
G +L A R +G TE+ + E + +++P ++G YV L + +AA RW D ++MR
Sbjct: 620 LGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRS 679
Query: 631 VGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREG 679
+G++K+ G+S +E+ K F + H D + L+ L +M + G
Sbjct: 680 LGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 42/344 (12%)
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
D + +++V+ Y + G+L AR F++M +++ + + AM+ Y ++ + A L M
Sbjct: 80 DFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 330 SR------------------------------------NVSSWNTMITGYGQNGDIAQAR 353
+ +++ N+M+ Y + + A+
Sbjct: 140 FQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
LFD M QRD VSW +ISGYA G+ E L + ++ DG ++ TF +LS +
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
LE+G+ +H Q+VKTG++ + AL+ MY KCG + V E I KDVV W MI+
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSV 532
G R G ++AL+VF M G + V+++C+ G D G + Y + Y++
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 533 -TPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
TP+ +I + + G L+++ + M E SW A++
Sbjct: 380 DTPA---LNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAII 419
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 180/419 (42%), Gaps = 65/419 (15%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ N +++ + + H A +F+ M +R VS+N MISGY S L +
Sbjct: 176 DCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR 235
Query: 111 M------PQR---------------------------------DLVSWNVMLTGYVRNRR 131
M P + D+ ++T Y++ +
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK 295
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHN 191
+ R+ +++P KDVV W M+SG + G A++A VF +M + + +A+ V +
Sbjct: 296 EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVAS 355
Query: 192 GRIEEACRLFDSKSDWEL--------ISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW 243
+ L S + L + N L+ + K L + +F++M+ RD+VSW
Sbjct: 356 CAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTF----F 294
N +ISGYAQ+ D+ +A LF++ + D FT +++ G L +
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 295 DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARK 354
+ + A+V Y + ++ A+ F+++ ++V SW +I GYG +G A +
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535
Query: 355 LFD------MMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD-GESLNRSTFSCAL 406
++ M P V + A++S + G ++ L +F + RD G N +C +
Sbjct: 536 IYSEFLHSGMEPNH--VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 9/215 (4%)
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
I+ + G +++ L+ F + + + TF L CA + L G IH QV+ G+
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
+ ++ ++L+ +Y K G + A VFE + E+DVV W MI Y+R G +A +
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 491 MKTIGVKPDEITMVGVLSACSHAGLIDRGTEY--FYSMNKDYSVTPSSKHYTCMIDLLGR 548
M+ G+KP +T++ +LS + ++ Y + D +V S + C D +G
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG- 196
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
+A+DL M + SW ++ GN
Sbjct: 197 -----DAKDLFDQME-QRDMVSWNTMISGYASVGN 225
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 289/553 (52%), Gaps = 39/553 (7%)
Query: 144 QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS 203
++DV +NA++SG+ NG +A E + +M NG+L D
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREM------RANGILP---------------DK 161
Query: 204 KSDWELISWNCLMGGFVKRKMLGAARKL-FDKMHVRDVVSWNTMISGYAQDGDMSQAKNL 262
+ L+ + M +K+ G A KL FD D + +++ Y++ + A+ +
Sbjct: 162 YTFPSLLKGSDAMELSDVKKVHGLAFKLGFDS----DCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 263 FDQSPHQD-VFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNK 317
FD+ P +D W A+V+GY Q ++A F +M ++ + + ++++ + S
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 318 MDMAREL----FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 373
+D R + + ++ N +I YG++ + +A +F+ M +RD +W +++
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 337
Query: 374 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY--- 430
+ G ++ L +F + G + T + L TC +A+L G++IHG ++ +G
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 431 -ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
+ F+ N+L+ MY KCG + +A VF+ + KD SWN MI GY G+ AL +F
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS 457
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
M GVKPDEIT VG+L ACSH+G ++ G + M Y++ P+S HY C+ID+LGRA
Sbjct: 458 CMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRA 517
Query: 550 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 609
+LEEA +L + P W ++L + R+HGN +L A + + ++EP + G YVL+S
Sbjct: 518 DKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMS 577
Query: 610 NLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 669
N+Y +G++ + ++R MR V+K G SW+ ++N +H F G+ HPE I+ +L
Sbjct: 578 NVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLS 637
Query: 670 ELDLKMRREGYVS 682
+ M Y++
Sbjct: 638 LVISHMHGHEYMT 650
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 173/403 (42%), Gaps = 69/403 (17%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS-SVSYNAMISGYLRNARFSLARDLFD 109
D D + +++++ + + A +VF+ +P R SV +NA+++GY + RF A +F
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 110 KMPQRDL-VSWNVM---LTGYVRNRRLGDARRL----FDSMPQKDVVSWNAMLSGYAQNG 161
KM + + VS + + L+ + + + + R + + D+V NA++ Y ++
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 162 YADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD------------------- 202
+ +EA +F M ++ +WN +L + + G + LF+
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371
Query: 203 -------------------------SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHV 237
KS E I N LM +VK L AR +FD M V
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH-NSLMDMYVKCGDLRDARMVFDSMRV 430
Query: 238 RDVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTF 293
+D SWN MI+GY A ++F D T+ ++ +G L+E R F
Sbjct: 431 KDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNF 490
Query: 294 FDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNG 347
QM I Y ++ +++K++ A EL + P N W ++++ +G
Sbjct: 491 LAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHG 550
Query: 348 D----IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
+ + ++L ++ P+ C + + + Y + G YEE L++
Sbjct: 551 NKDLALVAGKRLHELEPEH-CGGYVLMSNVYVEAGKYEEVLDV 592
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 169/397 (42%), Gaps = 64/397 (16%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------ 111
+++ + + G A+ VF R YNA+ISG++ N A + + +M
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 112 PQR--------------------------------DLVSWNVMLTGYVRNRRLGDARRLF 139
P + D + ++T Y + + DA+++F
Sbjct: 159 PDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218
Query: 140 DSMPQK-DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRI 194
D +P + D V WNA+++GY+Q ++A VF +M + + +L+A+ +G I
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Query: 195 EEACRL----FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 250
+ + + S +++ N L+ + K K L A +F+ M RD+ +WN+++ +
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVH 338
Query: 251 AQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM--------P 298
GD LF++ D+ T T ++ + L + R M
Sbjct: 339 DYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK 398
Query: 299 QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDM 358
NE +N+++ YV+ + AR +F++M ++ +SWN MI GYG A +F
Sbjct: 399 SSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSC 458
Query: 359 M----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
M + D +++ ++ + +G E N +++
Sbjct: 459 MCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 13/220 (5%)
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
+AAI A Y E + E N +T L CA G+QIHG +V
Sbjct: 28 FAAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMV 87
Query: 427 KTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
+ G+ + G +L+ MY KCG + A VF G E+DV +N +I+G+ +G A+
Sbjct: 88 RKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAM 146
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLID----RGTEYFYSMNKDYSVTPSSKHYTC 541
+ M+ G+ PD+ T +L L D G + + D V
Sbjct: 147 ETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSG------ 200
Query: 542 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL-GASRI 580
++ + +E+AQ + +P + W AL+ G S+I
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 117/281 (41%), Gaps = 39/281 (13%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLF 108
DL WN V+ H G D L +F M R V+ ++ R A R++
Sbjct: 327 DLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 109 DKMPQRDLVS--------WNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
M L++ N ++ YV+ L DAR +FDSM KD SWN M++GY
Sbjct: 387 GYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ 446
Query: 161 GYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACR-LFDSKSDWELIS---- 211
+ A ++F M + I++ GLL A H+G + E L ++ + ++
Sbjct: 447 SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDH 506
Query: 212 WNCLMGGFVKRKMLGAARKL-------FDKMHVRDVVSWNTMISGYAQDGDMSQA----K 260
+ C++ MLG A KL K + V W +++S G+ A K
Sbjct: 507 YACVI------DMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGK 560
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
L + P + + M + YV+ G +E D M Q+N
Sbjct: 561 RLHELEP-EHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQN 600
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 278 bits (712), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 186/647 (28%), Positives = 318/647 (49%), Gaps = 96/647 (14%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGD---ARRLFDSMPQK 145
N ++S Y R + + FD++ + D+ SW +L+ + +LGD A +FD MP++
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSA---SFKLGDIEYAFEVFDKMPER 152
Query: 146 D-VVSWNAMLSGYAQNGYADEAREVFYQMPHKNAIS------------------------ 180
D V WNAM++G ++GY + + E+F +M HK +
Sbjct: 153 DDVAIWNAMITGCKESGYHETSVELFREM-HKLGVRHDKFGFATILSMCDYGSLDFGKQV 211
Query: 181 ---------------WNGLLAAYVHNGRIEEACRLFDSKSDWEL---ISWNCLMGGF--- 219
N L+ Y + + +AC +F+ ++D + +++N ++ G
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE-ETDVAVRDQVTFNVVIDGLAGF 270
Query: 220 -------VKRKMLGAARKLFDKMHV-------------------------RDVVSWNTMI 247
V RKML A+ + D V + + N +
Sbjct: 271 KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 248 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEI 303
+ Y+ D A +F+ +D+ TW M+S Y Q + A + + +M + +E
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEF 390
Query: 304 SYNAMVAGYVQSNKMDMARE-LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 362
++ +++A + + ++M + + + S + N +I+ Y +NG I +A LF+ ++
Sbjct: 391 TFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK 450
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCALSTCADIAALELGKQ 420
+ +SW AIISG+ G E L F + + + T S LS C ++L LG Q
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 421 IHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGF 480
H V++ G +GNAL+ MY +CG+I + +VF + EKDVVSWN++I+ Y+RHG
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGE 570
Query: 481 GKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 539
G+ A+ +++M+ G V PD T VLSACSHAGL++ G E F SM + + V + H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 540 TCMIDLLGRAGRLEEAQDLMR--NMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
+C++DLLGRAG L+EA+ L++ W AL A HG+ +LG+ A+++ +
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 598 EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV 644
E + +YV LSN+YA +G W +A R + +G K G SW+ +
Sbjct: 691 EKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 176/388 (45%), Gaps = 37/388 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLA 104
+++ DL+ WN +IS++ + SA+ V+ M + ++ ++++ L +
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMV 408
Query: 105 RDLFDKMPQRDLVSW-NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
+ K + N +++ Y +N ++ A LF+ +K+++SWNA++SG+ NG+
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFP 468
Query: 164 DEAREVFYQMPHK------NAISWNGLLAAYVHNGRI----EEACRLFDSKSDWELISWN 213
E E F + +A + + LL+ V + + + E + N
Sbjct: 469 FEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN 528
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ---- 269
L+ + + + + ++F++M +DVVSWN++IS Y++ G+ A N + +
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 270 -DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAMVAGYVQSNKMDMARE 323
D T++A++S G+++E F+ M + +N ++ +V ++ +D A
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAES 648
Query: 324 LF---EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR---DCVSWAAIISGYAQT 377
L E V W + + +GD+ + + ++ ++ D + + + YA
Sbjct: 649 LVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGA 708
Query: 378 GHYEE------ALNMFIEIKRDGESLNR 399
G ++E A+NM +K+ G S R
Sbjct: 709 GMWKEAEETRRAINMIGAMKQRGCSWMR 736
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 161/378 (42%), Gaps = 72/378 (19%)
Query: 50 KDPDLLKWNKVISTHMRN---------GHCDSALR-------VFNTMPRRSSVSYNAMIS 93
+D LL + K++ +R G C A T + ++ NA ++
Sbjct: 272 RDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMT 331
Query: 94 GYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFD------------- 140
Y F A +F+ + ++DLV+WN M++ Y + + A ++
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 141 --------------SMPQKDVVSW---------NAMLSGYAQNGYADEAREVFYQMPHKN 177
M Q ++ + NA++S Y++NG ++A +F + KN
Sbjct: 392 FGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKN 451
Query: 178 AISWNGLLAAYVHNGRIEEACRLFDSKSDWEL------ISWNCLMGGFVKRK--MLGAAR 229
ISWN +++ + HNG E F + E+ + + L+ V MLG+
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQT 511
Query: 230 KLFDKMH--VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML 287
+ H ++ + N +I+ Y+Q G + + +F+Q +DV +W +++S Y ++G
Sbjct: 512 HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 288 DEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPS-----RNVSSWN 337
+ A + M + ++ +++A+++ + ++ E+F +M RNV ++
Sbjct: 572 ENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS 631
Query: 338 TMITGYGQNGDIAQARKL 355
++ G+ G + +A L
Sbjct: 632 CLVDLLGRAGHLDEAESL 649
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 371 ISGYAQTGHYEEALNMFIEIKR-DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
++G ++G AL +F ++ R ++ + S A++T + G Q+H +++G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
V N LL +Y + G++ F+ I+E DV SW T+++ + G + A VF+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
M + D +++ C +G + E F M+K
Sbjct: 148 KMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHK 183
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 273/541 (50%), Gaps = 19/541 (3%)
Query: 153 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDS--------- 203
+++ + G AR+VF ++P + +N ++ Y +E RL+D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 204 KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
S + + CL G V K K D + DV +++++ Y + G M +A+ LF
Sbjct: 116 SSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSN----KMD 319
+ +DV WT MV+G+ Q G +A F+ +M + ++ G +Q++
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 320 MARE----LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYA 375
M R L+ NV +++ Y + G I A ++F M + VSW ++ISG+A
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
Q G +A +E++ G + T L C+ + +L+ G+ +H ++K +
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRV 353
Query: 436 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
AL+ MY KCG++ + ++FE + KD+V WNTMI+ Y HG G++ + +F M
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
++PD T +LSA SH+GL+++G +F M Y + PS KHY C+IDLL RAGR+EEA
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 556 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
D++ + + W ALL H N +G+ AA + ++ P + G+ L+SN +A +
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 616 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 675
+W + +R MR+ ++KV GYS +EV ++ F + D H E + L L ++
Sbjct: 534 NKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
Query: 676 R 676
R
Sbjct: 594 R 594
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 170/386 (44%), Gaps = 58/386 (15%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP------- 112
+I++ R G A +VF+ +P+R YN+MI Y R L+D+M
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 113 --------------------------------QRDLVSWNVMLTGYVRNRRLGDARRLFD 140
+ D+ + +L Y++ ++ +A LF
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 141 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEE 196
M ++DV+ W M++G+AQ G + +A E + +M + ++ + GLL A G +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 197 ACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ 252
L+ + ++ L+ + K + A ++F +M + VSW ++ISG+AQ
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 253 DGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK---NEISY 305
+G ++A + D+ T ++ Q G L R + ++ + ++
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA 355
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR--- 362
A++ Y + + +RE+FE + +++ WNTMI+ YG +G+ + LF M +
Sbjct: 356 TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIE 415
Query: 363 -DCVSWAAIISGYAQTGHYEEALNMF 387
D ++A+++S + +G E+ + F
Sbjct: 416 PDHATFASLLSALSHSGLVEQGQHWF 441
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 168/391 (42%), Gaps = 55/391 (14%)
Query: 84 SSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP 143
SS+S + +I+ R S AR +FD++PQR + +N M+ Y R + + RL+D M
Sbjct: 50 SSISRD-LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI 108
Query: 144 ---------------------------------------QKDVVSWNAMLSGYAQNGYAD 164
+ DV +++L+ Y + G D
Sbjct: 109 AEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMD 168
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 224
EA +F +M ++ I W ++ + G+ +A + + +M G ++
Sbjct: 169 EAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASG 228
Query: 225 LGAARKLFDKMH--------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
K+ +H +VV +++ YA+ G + A +F + + +W +
Sbjct: 229 DLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 277 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
++SG+ QNG+ ++A +M Q + ++ ++ Q + R + + R+
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 333 V---SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
V + ++ Y + G ++ +R++F+ + ++D V W +IS Y G+ +E +++F++
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQ 420
+ + +TF+ LS + +E G+
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQH 439
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 420 QIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGE---ANDVFEGIEEKDVVSWNTMIAGY 475
QIH V+ TG G + L+ CG IGE A VF+ + ++ V +N+MI Y
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIA---SCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
+R + L +++ M ++PD T + AC ++++G E + D+
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG-EAVWCKAVDFGYKND 150
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
+ +++L + G+++EA+ L M A + + + G + G+ + F
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKM------AKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 596 KMEPHNSGM---YVLLSNLYAASGRWADAGNMRS 626
E N G V++ L ASG D RS
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRS 238
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 260/499 (52%), Gaps = 31/499 (6%)
Query: 153 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISW 212
+++ Y + G +AR+VF +MP ++ ++ A NG +E+ F E+
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFR-----EMYKD 111
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
+ F+ +L A+R L D+ + G M L S D F
Sbjct: 112 GLKLDAFIVPSLLKASRNLLDR-----------------EFGKMIHCLVL-KFSYESDAF 153
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP--- 329
++++ Y + G + AR F + +++ + +NAM++GY +++ D A L + M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 330 -SRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEAL 384
+V +WN +I+G+ + + ++ ++M + D VSW +IISG E+A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
+ F ++ G N +T L C +A ++ GK+IHG V TG E FV +ALL MY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
KCG I EA +F +K V++N+MI YA HG +A+ +F+ M+ G K D +T
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 564
+L+ACSHAGL D G F M Y + P +HY CM+DLLGRAG+L EA ++++ M
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRM 453
Query: 565 EPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 624
EP WGALL A R HGN EL AA+ + ++EP NSG +LL++LYA +G W M
Sbjct: 454 EPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRM 513
Query: 625 RSRMRDVGVQKVTGYSWVE 643
+ ++ ++ G SWVE
Sbjct: 514 KKMIKKKRFRRFLGSSWVE 532
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 195/423 (46%), Gaps = 73/423 (17%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISW 181
++T YV ++ DAR++FD MP++D+ M+ A+NGY E+ + F +M +K+ +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM-YKDGLKL 115
Query: 182 NGLLAAYVHN----------GRIEEACRL-FDSKSDWELISWNCLMGGFVKRKMLGAARK 230
+ + + G++ L F +SD ++S L+ + K +G ARK
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVS--SLIDMYSKFGEVGNARK 173
Query: 231 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGM 286
+F + +D+V +N MISGYA + +A NL DV TW A++SG+
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 287 LDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAM-------------- 328
++ + M + + +S+ ++++G V + + + A + F+ M
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 329 --PSRNVSSW---------NTMITG--------------YGQNGDIAQARKLFDMMPQRD 363
P+ ++ +++TG YG+ G I++A LF P++
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
Query: 364 CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI-- 421
V++ ++I YA G ++A+ +F +++ GE L+ TF+ L+ C+ +LG+ +
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 422 ----HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYA 476
++V C V LLG + G + EA ++ + + E D+ W ++A
Sbjct: 414 LMQNKYRIVPRLEHYACMVD--LLG---RAGKLVEAYEMIKAMRMEPDLFVWGALLAACR 468
Query: 477 RHG 479
HG
Sbjct: 469 NHG 471
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 157/359 (43%), Gaps = 57/359 (15%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+ D + +I + + G +A +VF+ + + V +NAMISGY N++ A +L
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 111 MP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGY 162
M + D+++WN +++G+ R + + M + DVVSW +++SG N
Sbjct: 209 MKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 163 ADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMG- 217
++A + F QM + N+ + LL A L K E+ ++ + G
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPA---------CTTLAYMKHGKEIHGYSVVTGL 319
Query: 218 ---GFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
GFV+ +L Y + G +S+A LF ++P + T+
Sbjct: 320 EDHGFVRSALLDM----------------------YGKCGFISEAMILFRKTPKKTTVTF 357
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNE----ISYNAMVAGYVQSNKMDMARELFEAMPS 330
+M+ Y +G+ D+A FDQM E +++ A++ + D+ + LF M +
Sbjct: 358 NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Query: 331 R-----NVSSWNTMITGYGQNGDIAQARKLFDMMP-QRDCVSWAAIISGYAQTGHYEEA 383
+ + + M+ G+ G + +A ++ M + D W A+++ G+ E A
Sbjct: 418 KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 418 GKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYAR 477
G+ +H +V +G + L+ Y +CG + +A VF+ + ++D+ MI AR
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 478 HGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSS 536
+G+ +++L F M G+K D + +L A + L+DR + + + +S +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN--LLDREFGKMIHCLVLKFSYESDA 152
Query: 537 KHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ +ID+ + G + A+ + ++
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDL 178
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 275/549 (50%), Gaps = 67/549 (12%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 205
D V N+++S YA+ R+VF +M H++ +S+ ++ + +G + EA +L
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
+ GF+ + L V +++ T + ++ M A L D+
Sbjct: 141 FY----------GFIPKSEL-----------VASLLALCTRMGSSSKVARMFHALVLVDE 179
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTF--FDQMPQKNEISYNAMVAGYVQSNKMDMARE 323
+ V TA+V Y++ D A F FDQM KNE+S+ AM++G V + +M +
Sbjct: 180 RMQESVLLSTALVDMYLKFD--DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVD 237
Query: 324 LFEAMPSRNV--------------------SSWNTMITG--------------------Y 343
LF AM N+ SS I G Y
Sbjct: 238 LFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMY 297
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ G+++ +R LF+ RD V W+++ISGYA+TG E +N+ +++++G N T
Sbjct: 298 CRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLL 357
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
+S C + L +H Q++K G+ + +GNAL+ MY KCGS+ A +VF + EK
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 523
D+VSW++MI Y HG G +AL +F+ M G + D++ + +LSAC+HAGL++ F
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 524 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
K Y + + +HY C I+LLGR G++++A ++ NMP +P A W +LL A HG
Sbjct: 478 TQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGR 536
Query: 584 TEL-GEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 642
++ G+ A + K EP N YVLLS ++ SG + A +R M+ + K G+S +
Sbjct: 537 LDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Query: 643 EVQNKIHKF 651
E + +I +
Sbjct: 597 EPELQIEDY 605
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 173/390 (44%), Gaps = 45/390 (11%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYL----------RNARFS 102
D + + +I++ ++G A+++ M + + +++ L + AR
Sbjct: 112 DTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMF 171
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
A L D+ Q ++ ++ Y++ A +FD M K+ VSW AM+SG N
Sbjct: 172 HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQN 231
Query: 163 ADEAREVFYQMPHKN----------------AISWNGLLAAYVHNGRIEEACRLFDSKSD 206
+ ++F M +N +++ L +H C D +
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHA-DERLT 290
Query: 207 WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
++ C G + +R LF+ VRDVV W++MISGYA+ GD S+ NL +Q
Sbjct: 291 AAFMTMYCRCGN------VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 267 PHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISY----NAMVAGYVQSNKM 318
+ + T A+VS + +L A T Q+ + +S+ NA++ Y + +
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSL 404
Query: 319 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGY 374
ARE+F + +++ SW++MI YG +G ++A ++F M + D +++ AI+S
Sbjct: 405 SAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
G EEA +F + + + ++C
Sbjct: 465 NHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 494
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 59/343 (17%)
Query: 72 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVML-------- 123
+A VF+ M ++ VS+ AMISG + N + + DLF M + +L V L
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 124 --------------------------------TGYVRNRRLGDARRLFDSMPQKDVVSWN 151
T Y R + +R LF++ +DVV W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 152 AMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW 207
+M+SGYA+ G E + QM + N+++ +++A ++ + A +
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 208 ELISW----NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
+S N L+ + K L AAR++F ++ +D+VSW++MI+ Y G S+A +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 264 D---QSPHQ-DVFTWTAMVSGYVQNGMLDEARTFFDQ-----MPQKNEISYNAMVAGYVQ 314
+ H+ D + A++S G+++EA+T F Q MP E Y + +
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLE-HYACYINLLGR 501
Query: 315 SNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLF 356
K+D A E+ MP + + W+++++ +G + A K+
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 129/322 (40%), Gaps = 77/322 (23%)
Query: 90 AMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK---- 145
A ++ Y R SL+R LF+ RD+V W+ M++GY + L + M ++
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA 351
Query: 146 -----------------------------------DVVSWNAMLSGYAQNGYADEAREVF 170
++ NA++ YA+ G AREVF
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF 411
Query: 171 YQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARK 230
Y++ K+ +SW+ ++ AY +G EA +F + GG
Sbjct: 412 YELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM----------IKGG------------ 449
Query: 231 LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYV----QNGM 286
H D +++ ++S G + +A+ +F Q+ + + Y+ + G
Sbjct: 450 -----HEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGK 504
Query: 287 LDEARTFFDQMPQKNEIS-YNAMVAGYVQSNKMD-----MARELFEAMPSRNVSSWNTMI 340
+D+A MP K ++++++ ++D +A EL ++ P N +++ +
Sbjct: 505 IDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPD-NPANYVLLS 563
Query: 341 TGYGQNGDIAQARKLFDMMPQR 362
+ ++G+ A ++ +M +R
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRR 585
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 10/223 (4%)
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALE-----LGKQIHGQV 425
+ G Y+EAL ++ K SL + F+ L + A + LG Q+H
Sbjct: 17 LKGLVSDQFYDEALRLY---KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLC 73
Query: 426 VKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
+K G + V N+L+ MY K VF+ + +D VS+ ++I + G +A+
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 486 MVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMN-KDYSVTPSSKHYTCMID 544
+ + M G P + +L+ C+ G + F+++ D + S T ++D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
+ + A + M + SW A++ + N E+G
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNE-VSWTAMISGCVANQNYEMG 235
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/644 (27%), Positives = 306/644 (47%), Gaps = 41/644 (6%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVF----NTMPRRSSVSYNAMISGYLRNARFSLAR--- 105
+++ WN +I +G C+S+L ++ N + S S+ + ++ R
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Query: 106 -DLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
D+ D +L+ Y + +G+A +F + K + WNAM++ YA+N Y
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 224
A ++F M K+ + DS + +IS ++G + K
Sbjct: 356 SALDLFGFMRQKSVLP---------------------DSFTLSNVISCCSVLGLYNYGKS 394
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 284
+ A +LF + + +++ Y++ G A +F +D+ W +++SG +N
Sbjct: 395 VHA--ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 285 GMLDEARTFFDQM--------PQKNEIS--YNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
G EA F M P + ++ NA + + + + NV
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
+++I Y + G A K+F M + V+W ++IS Y++ E ++++F + G
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ + + L + A+L GK +HG ++ G + + NAL+ MY KCG A
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
++F+ ++ K +++WN MI GY HG AL +F+ MK G PD++T + ++SAC+H+G
Sbjct: 633 NIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSG 692
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
++ G F M +DY + P+ +HY M+DLLGRAG LEEA ++ MP E ++ W L
Sbjct: 693 FVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCL 752
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
L ASR H N ELG +AE + +MEP YV L NLY +G +A + M++ G+
Sbjct: 753 LSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLH 812
Query: 635 KVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRRE 678
K G SW+EV ++ + F G P K I+ L L M E
Sbjct: 813 KQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/564 (23%), Positives = 268/564 (47%), Gaps = 42/564 (7%)
Query: 58 NKVISTHMRNGHCDSALRVFNT-------MPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
+++ +++ G D A++VF+ + R +N+MI GY + RF F +
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 111 M----PQRDLVSWNVMLTGYVR--NRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQN 160
M + D S +++++ + N R + +++ M + D A++ Y +
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 161 GYADEAREVFYQMPHK-NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCL 215
G + +A VF ++ K N + WN ++ + +G E + L+ ++ S+
Sbjct: 219 GLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGA 278
Query: 216 MGGFVKRKMLGAARKL---FDKMHVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
+G + + G R++ KM + D +++S Y++ G + +A+ +F + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKM--------DMARE 323
W AMV+ Y +N A F M QK+ + + ++ + + + E
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 324 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
LF+ + + ++T Y + G A +F M ++D V+W ++ISG + G ++EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 384 LNMFIEIKRDGESL--NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
L +F ++K D +SL + + + CA + AL G Q+HG ++KTG FVG++L+
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
+Y KCG A VF + +++V+WN+MI+ Y+R+ + ++ +F M + G+ PD +
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 502 TMVGVLSACSH-AGLIDRGTEYFYSMNKDYSVTPSSKHY-TCMIDLLGRAGRLEEAQDLM 559
++ VL A S A L+ + + Y++ PS H +ID+ + G + A+++
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLG---IPSDTHLKNALIDMYVKCGFSKYAENIF 635
Query: 560 RNMPFEPPAASWGALLGASRIHGN 583
+ M +W ++ HG+
Sbjct: 636 KKMQ-HKSLITWNLMIYGYGSHGD 658
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 32/376 (8%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGY--------LRNAR 100
V D L WN +++ + N + SAL +F M ++S + + +S L N
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 101 FSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
S+ +LF + Q + +LT Y + DA +F SM +KD+V+W +++SG +N
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 161 GYADEAREVFYQMP-HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF 219
G EA +VF M +++ + + V N F + +I ++ F
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 220 VKRKMLG---------AARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 270
V ++ A K+F M ++V+WN+MIS Y+++ + +LF+ Q
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 271 VF----TWTAMVSGYVQNGMLDEARTFFDQ-----MPQKNEISYNAMVAGYVQSNKMDMA 321
+F + T+++ L + ++ +P + NA++ YV+ A
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK-NALIDMYVKCGFSKYA 631
Query: 322 RELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQT 377
+F+ M +++ +WN MI GYG +GD A LFD M + D V++ ++IS +
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
Query: 378 GHYEEALNMFIEIKRD 393
G EE N+F +K+D
Sbjct: 692 GFVEEGKNIFEFMKQD 707
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 169/382 (44%), Gaps = 41/382 (10%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMP-RRSSVSYNAMISGYLRNARFSLARDL 107
+++ D++ W +IS +NG AL+VF M S+ ++ I + NA L
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLG---------DARRLFDSMPQKDVVSWNAMLSGYA 158
F ++ ++L +V + + A ++F SM +++V+WN+M+S Y+
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYS 553
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRL------FDSKSDWE 208
+N + + ++F M + +++S +L A + + L SD
Sbjct: 554 RNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTH 613
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD---- 264
L N L+ +VK A +F KM + +++WN MI GY GD A +LFD
Sbjct: 614 L--KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNK 317
+SP D T+ +++S +G ++E + F+ M Q I Y MV ++
Sbjct: 672 AGESP--DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGL 729
Query: 318 MDMARELFEAMPSRNVSS-WNTMI----TGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
++ A +AMP SS W ++ T + I A KL M P+R ++ +I+
Sbjct: 730 LEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGS-TYVQLIN 788
Query: 373 GYAQTGHYEEALNMFIEIKRDG 394
Y + G EA + +K G
Sbjct: 789 LYMEAGLKNEAAKLLGLMKEKG 810
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 134/318 (42%), Gaps = 56/318 (17%)
Query: 365 VSWAAIISG---YAQTGHYEEALNMFIEIKRDGES---LNRSTFSCALSTCADIAALELG 418
+S A+I SG Q G Y +AL+++ K DG S + TF L C+ + L G
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYG 79
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE-------GIEEKDVVSWNTM 471
K IHG VV G+ F+ +L+ MY KCG + A VF+ G+ +DV WN+M
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 472 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR--GTEYFYSMNKD 529
I GY + K+ + F M GV+PD ++ V+S G R G + M ++
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 530 YSVTPSSKHYTCMIDL--------------------------------LGRAGRLEEAQD 557
S+ S T +ID+ G +G E + D
Sbjct: 200 -SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 558 ---LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS--NLY 612
L +N + + S+ LGA N+ G + V KM HN YV S ++Y
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP-YVCTSLLSMY 317
Query: 613 AASGRWADAGNMRSRMRD 630
+ G +A + S + D
Sbjct: 318 SKCGMVGEAETVFSCVVD 335
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 199/320 (62%), Gaps = 2/320 (0%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
++++ Y +G++ A K+F+ MP+R+ VSW A+ISG+AQ + L ++ ++++
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 397 LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDV 456
N TF+ LS C AL G+ +H Q + G ++ + N+L+ MY KCG + +A +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 457 FEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE-SMKTIGVKPDEITMVGVLSACSHAGL 515
F+ KDVVSWN+MIAGYA+HG QA+ +FE M G KPD IT +GVLS+C HAGL
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+ G ++F M ++ + P HY+C++DLLGR G L+EA +L+ NMP +P + WG+LL
Sbjct: 339 VKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 576 GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQK 635
+ R+HG+ G +AAE +EP + +V L+NLYA+ G W +A +R M+D G++
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 636 VTGYSWVEVQNKIHKFTVGD 655
G SW+E+ N + F D
Sbjct: 458 NPGCSWIEINNYVFMFKAED 477
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
+ DV ++++ Y G++ A +F++ P ++V +WTAM+SG+ Q +D + +
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 297 MPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW----NTMITGYGQNGD 348
M + N+ ++ A+++ S + R + + S+ N++I+ Y + GD
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF-IEIKRDGESLNRSTFSCALS 407
+ A ++FD +D VSW ++I+GYAQ G +A+ +F + + + G + T+ LS
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVV 466
+C ++ G++ + + G + + L+ + + G + EA ++ E + K + V
Sbjct: 332 SCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 467 SWNTMIAGYARHG 479
W +++ HG
Sbjct: 392 IWGSLLFSCRVHG 404
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 121/244 (49%), Gaps = 18/244 (7%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD--- 202
DV ++++ Y +G + A +VF +MP +N +SW +++ + R++ +L+
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 203 -SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW----NTMISGYAQDGDMS 257
S SD ++ L+ LG R + + + S+ N++IS Y + GD+
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 258 QAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGY 312
A +FDQ ++DV +W +M++GY Q+G+ +A F+ M K + I+Y +++
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 313 VQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSW 367
+ + R+ F M ++ ++ ++ G+ G + +A +L + MP + + V W
Sbjct: 334 RHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 368 AAII 371
+++
Sbjct: 394 GSLL 397
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 49/253 (19%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ + ++ + +G ++A +VF MP R+ VS+ AMISG+ + R + L+ KM
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 113 QRD-----------------------------------LVSW----NVMLTGYVRNRRLG 133
+ L S+ N +++ Y + L
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAY 188
DA R+FD KDVVSWN+M++GYAQ+G A +A E+F M K +AI++ G+L++
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 189 VHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSW 243
H G ++E + F+ ++ EL ++CL+ + +L A +L + M ++ + V W
Sbjct: 334 RHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 244 NTMISGYAQDGDM 256
+++ GD+
Sbjct: 394 GSLLFSCRVHGDV 406
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
+KRDG S + S A+ +C G H +K G+ + ++G++L+ +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
+ A VFE + E++VVSW MI+G+A+ L ++ M+ P++ T +LSA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 510 CSHAGLIDRG----TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 565
C+ +G + +G + + K Y +S +I + + G L++A +
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNS-----LISMYCKCGDLKDAFRIFDQFS-N 284
Query: 566 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEP 599
SW +++ HG L +A E+ M P
Sbjct: 285 KDVVSWNSMIAGYAQHG---LAMQAIELFELMMP 315
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 269 bits (687), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 203/333 (60%)
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
++ Y +GD+ A LF + RD + W A+ISGY Q G +E L ++ +++++ +
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
+ TF+ C+ + LE GK+ H ++K ++ V +AL+ MYFKC S + + VF+
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 518
+ ++V++W ++I+GY HG + L FE MK G +P+ +T + VL+AC+H GL+D+
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 519 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGAS 578
G E+FYSM +DY + P +HY M+D LGRAGRL+EA + + P + WG+LLGA
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 579 RIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 638
RIHGN +L E AA +++P N G YV+ +N YA+ G A +R +M + GV+K G
Sbjct: 389 RIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPG 448
Query: 639 YSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 671
YS +E+Q ++H+F D H ++IY + E+
Sbjct: 449 YSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 23/293 (7%)
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDG----------DMSQAKNLFDQSPHQDVFTW 274
L A LF + +RD++ WN MISGY Q G DM Q + + DQ VF
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS 334
+ + +++G A + + N I +A+V Y + + +F+ + +RNV
Sbjct: 219 CSALD-RLEHGKRAHA-VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 390
+W ++I+GYG +G +++ K F+ M + C V++ +++ G ++ F +
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 391 KRD-GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
KRD G ++ + T L+ + V+K+ + V +LLG G+
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF---VMKSPCKEHPPVWGSLLGACRIHGN 393
Query: 450 IG---EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
+ A F ++ + ++ GYA G + A V M+ GVK D
Sbjct: 394 VKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
F + QR + G TG +EA+ + G + T++ L C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWS---SGLQVEPETYAVLLQECKQRKEY 124
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
GK+IH Q+ G+ ++ LL +Y G + A +F ++ +D++ WN MI+GY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
+ G ++ L ++ M+ + PD+ T V ACS ++ G
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 23/284 (8%)
Query: 122 MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI-- 179
+L Y + L A LF S+ +D++ WNAM+SGY Q G E ++Y M +
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 180 --SWNGLLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
++ + A R+E R + +I + L+ + K ++FD
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDE 289
++ R+V++W ++ISGY G +S+ F++ + + T+ +++ G++D+
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 290 ARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR-NVSSWNTMITGY 343
F M + I Y AMV ++ ++ A E P + + W +++
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 344 GQNGDIA----QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
+G++ A K ++ P + ++ +GYA G E A
Sbjct: 389 RIHGNVKLLELAATKFLELDPT-NGGNYVVFANGYASCGLREAA 431
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNA----RFSLA 104
+K DL+ WN +IS +++ G L ++ M + V + R R
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 105 RDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
+ M +R +++ + ++ Y + D R+FD + ++V++W +++SGY +
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 161 GYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDS-KSDW 207
G E + F +M + N +++ +L A H G +++ F S K D+
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 120/298 (40%), Gaps = 25/298 (8%)
Query: 59 KVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS 118
K++ + +G +A +F ++ R + +NAMISGY++ ++ M Q +V
Sbjct: 148 KLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP 207
Query: 119 WNVMLTGYVRN----RRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVF 170
R RL +R M ++ +++ +A++ Y + + VF
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 171 YQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSD---------WELISWNCLMGGFVK 221
Q+ +N I+W L++ Y ++G++ E + F+ + + ++ C GG V
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD 327
Query: 222 RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP---HQDVFTWTAMV 278
+ D + + M+ + G + +A +SP H V W +++
Sbjct: 328 KGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV--WGSLL 385
Query: 279 SGYVQNG---MLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
+G +L+ A T F ++ N +Y GY + A ++ M + V
Sbjct: 386 GACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGV 443
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 271/540 (50%), Gaps = 46/540 (8%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN----------GYADEAREV 169
N +L Y + R DA +LFD MP +++V+WN ++ G Q G+ +R +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
F + + +S+ GL+ C DS + I +CLM VK+ G
Sbjct: 135 FTDVS-LDHVSFMGLI----------RLCT--DSTNMKAGIQLHCLM---VKQ---GLES 175
Query: 230 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 289
F +++ Y + G + +A+ +F+ +D+ W A+VS YV NGM+DE
Sbjct: 176 SCFPS---------TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDE 226
Query: 290 ARTFFDQM-PQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 343
A M KN +++++++ + LF+ ++ ++ Y
Sbjct: 227 AFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMY 286
Query: 344 GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
++ ++ AR+ F+ M R+ VSW A+I G+AQ G EA+ +F ++ + + TF+
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK 463
LS+CA +A+ KQ+ V K G V N+L+ Y + G++ EA F I E
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYF 523
D+VSW ++I A HGF +++L +FESM ++PD+IT + VLSACSH GL+ G F
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCF 465
Query: 524 YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGN 583
M + Y + +HYTC+IDLLGRAG ++EA D++ +MP EP + A G IH
Sbjct: 466 KRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEK 525
Query: 584 TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR-MRDVGVQKVTGYSWV 642
E + A+ + ++EP Y +LSN Y + G W A +R R R+ K G SW+
Sbjct: 526 RESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 227/529 (42%), Gaps = 122/529 (23%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLR-----NARFSLARDLF 108
L NK++ + + D A ++F+ MP R+ V++N +I G ++ N R L
Sbjct: 71 LFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYL 130
Query: 109 DKMPQRDLVSWNVMLTGYVR------NRRLG----------------------------- 133
++ D+ +V G +R N + G
Sbjct: 131 SRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKC 190
Query: 134 ----DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM-PHKNA-----ISWNG 183
+ARR+F+++ +D+V WNA++S Y NG DEA + M KN +++
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 184 LLAAYVHNGRIEEACR----LFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
LL+A RIE+ + LF +++ L+ + K L AR+ F+ M VR+
Sbjct: 251 LLSA----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
VVSWN MI G+AQ+G+ +A LF Q +++ Q
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENL---------------------------Q 339
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARK 354
+E+++ ++++ + + + +++ +AM ++ +S N++I+ Y +NG++++A
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFLSVANSLISSYSRNGNLSEALL 398
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA 414
F + + D VSW ++I A G EE+L MF + + + ++ TF LS C+
Sbjct: 399 CFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQP-DKITFLEVLSACS---- 453
Query: 415 LELGKQIHGQVVKTGYETGCFVG--------------NALLGMYFKCGSIGEANDVFEGI 460
HG +V+ G CF L+ + + G I EA+DV +
Sbjct: 454 -------HGGLVQEGLR--CFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Query: 461 -EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
E + G H K+ M + + K + ++P + +LS
Sbjct: 505 PTEPSTHALAAFTGGCNIH--EKRESMKWGAKKLLEIEPTKPVNYSILS 551
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 28/362 (7%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMP------RRSSVSYNAMISGYLRNARFS 102
V D DL+ WN ++S+++ NG D A + M R ++++++S
Sbjct: 203 VLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQ 262
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGY 162
+ LF Q D+ +L Y ++ L DAR F+SM ++VVSWNAM+ G+AQNG
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGE 322
Query: 163 ADEAREVFYQMPHKN----AISWNGLL---AAYVHNGRIEEACRLFDSKSDWELIS-WNC 214
EA +F QM +N +++ +L A + I++ + K + +S N
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANS 382
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD---QSPHQDV 271
L+ + + L A F + D+VSW ++I A G ++ +F+ Q D
Sbjct: 383 LISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDK 442
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFE 326
T+ ++S G++ E F +M + +I Y ++ ++ +D A ++
Sbjct: 443 ITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLN 502
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQ-----ARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
+MP+ + TG + + A+KL ++ P + V+++ + + Y GH+
Sbjct: 503 SMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKP-VNYSILSNAYVSEGHWN 561
Query: 382 EA 383
+A
Sbjct: 562 QA 563
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 284/560 (50%), Gaps = 66/560 (11%)
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP--QKDVVSWNAMLSGYAQNG---YADEAR 167
+ ++V + + Y+++ RL A F+ +P +++ SWN +LSGY+++ Y+D
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 168 EVFYQMPHKNAI-SWNGLLA--AYVHNGRIEEACRLFD-------SKSDWELISWNCLMG 217
H + + S+N + A A V G +E + K D+ S L+
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS---LVE 152
Query: 218 GFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFT 273
+ + + +A+K+FD++ VR+ V W ++ GY + + LF D D T
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 274 WTAMV--SGYVQNGMLDEA-------RTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 324
+V G V G + + R+F DQ + Y+Q++ +DM
Sbjct: 213 LICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ-------------SDYLQASIIDM---- 255
Query: 325 FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEAL 384
Y + + ARKLF+ R+ V W +ISG+A+ EA
Sbjct: 256 ------------------YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
++F ++ R+ N+ T + L +C+ + +L GK +HG +++ G E + + MY
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMY 357
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
+CG+I A VF+ + E++V+SW++MI + +G ++AL F MK+ V P+ +T V
Sbjct: 358 ARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFV 417
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 564
+LSACSH+G + G + F SM +DY V P +HY CM+DLLGRAG + EA+ + NMP
Sbjct: 418 SLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV 477
Query: 565 EPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 624
+P A++WGALL A RIH +L + AE + MEP S +YVLLSN+YA +G W +
Sbjct: 478 KPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCV 537
Query: 625 RSRMRDVGVQKVTGYSWVEV 644
R +M G +K G S EV
Sbjct: 538 RRKMGIKGYRKHVGQSATEV 557
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 229/515 (44%), Gaps = 99/515 (19%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMP--RRSSVSYNAMISGYLRNAR--FSLARDLFDKMPQ 113
+ + + ++++ D A FN +P +R+ S+N ++SGY ++ +S L+++M +
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 114 R--DLVSWNVMLT-------GYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
+ S+N++ G + N L + + + + D V+ +++ YAQ G +
Sbjct: 103 HCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA-PSLVEMYAQLGTME 161
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGG-- 218
A++VF ++P +N++ W L+ Y+ + E RLF D+ + ++ CL+
Sbjct: 162 SAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACG 221
Query: 219 ----------------------------------FVKRKMLGAARKLFDKMHVRDVVSWN 244
+VK ++L ARKLF+ R+VV W
Sbjct: 222 NVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNGMLDEARTFFDQMPQK 300
T+ISG+A+ +A +LF Q + + T A++ G L ++
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS-------- 333
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP 360
V GY+ N ++M + ++ + I Y + G+I AR +FDMMP
Sbjct: 334 --------VHGYMIRNGIEM-----------DAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 361 QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG-K 419
+R+ +SW+++I+ + G +EEAL+ F ++K N TF LS C+ ++ G K
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWK 434
Query: 420 QIHGQ-----VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS-WNTMIA 473
Q VV C V LLG + G IGEA + + K + S W +++
Sbjct: 435 QFESMTRDYGVVPEEEHYACMVD--LLG---RAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
H A + E K + ++P++ ++ +LS
Sbjct: 490 ACRIHKEVDLAGEIAE--KLLSMEPEKSSVYVLLS 522
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE--EK 463
L+ + L +Q+H +V+ G+E +G++L Y + + A F I ++
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 464 DVVSWNTMIAGYARHGFG--KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
+ SWNT+++GY++ L+++ M+ D +V + AC GL++ G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 522 YF-----YSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
++KD V PS ++++ + G +E AQ + +P + WG L+
Sbjct: 131 IHGLAMKNGLDKDDYVAPS------LVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/584 (28%), Positives = 284/584 (48%), Gaps = 47/584 (8%)
Query: 83 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 142
R++ N + Y ++ A LFD +P ++ ++WNV L G +N L +A LFD M
Sbjct: 37 RTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM 96
Query: 143 PQKDVVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEE 196
P++DVVSWN M+SG G+ + VF+ M P + S L V +G
Sbjct: 97 PERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIH 156
Query: 197 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 256
+ S + L+ WN +M + + + A +F M RDVVSWN +I + G+
Sbjct: 157 GNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNK 216
Query: 257 SQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAM 308
A + F + D +T + +VS L + + + N I A
Sbjct: 217 EVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG 276
Query: 309 VAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWA 368
+ + + N++D + +LF R + W++++
Sbjct: 277 IDMFSKCNRLDDSVKLF-----RELEKWDSVLCN-------------------------- 305
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
++I Y+ E+AL +FI ++ TFS LS+ + L+ G +H V+K
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKL 364
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVF 488
G++ V +L+ MYFK GS+ A VF + KD++ WNT+I G AR+ ++L +F
Sbjct: 365 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 489 -ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
+ + +KPD +T++G+L AC +AG ++ G + F SM K + V P ++HY C+I+LL
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 484
Query: 548 RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVL 607
R G + EA+D+ +PFEP + W +L AS G+T L E A+ + + EP +S Y++
Sbjct: 485 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 608 LSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKF 651
L +Y + RW ++ +R M + ++ G S + +++ + F
Sbjct: 545 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 154/348 (44%), Gaps = 46/348 (13%)
Query: 219 FVKRKMLGAARKLFDKMH--------VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 270
V R +L + L +H VR N + Y + G + A LFD P ++
Sbjct: 10 LVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKN 69
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF----- 325
TW + G +NG L+ A FD+MP+++ +S+N M++G V + +F
Sbjct: 70 TITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR 129
Query: 326 -EAMPSR-------------------------------NVSSWNTMITGYGQNGDIAQAR 353
E P+ N+ WN+++ Y + G A
Sbjct: 130 WEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYAL 189
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
+F M RD VSW +I + +G+ E AL+ F ++ + T S +S C+D+
Sbjct: 190 SVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLR 249
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
L GKQ +K G+ + V A + M+ KC + ++ +F +E+ D V N+MI
Sbjct: 250 ELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIG 309
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
Y+ H G+ AL +F T V+PD+ T VLS+ +A ++D G +
Sbjct: 310 SYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGAD 356
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 190/458 (41%), Gaps = 91/458 (19%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N+ + + ++G +AL++F+ +P ++++++N + G +N + A DLFD+MP+RD+V
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 118 SWNVMLTGYVRN-------RRLGDARR------------------------------LFD 140
SWN M++G V R D +R +
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICS 162
Query: 141 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL 200
+ + ++V WN+++ Y + G D A VF M ++ +SWN L+ + +G E A
Sbjct: 163 GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQ 222
Query: 201 F------DSKSDWELISWN-------------------CLMGGFVKRKM-LGAARKLFDK 234
F + + D +S C+ GF+ + LGA +F K
Sbjct: 223 FWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSK 282
Query: 235 MH--------VRDVVSW-----NTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAM 277
+ R++ W N+MI Y+ A LF QS D FT++++
Sbjct: 283 CNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSV 342
Query: 278 VSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
+S + MLD + + + +++ Y ++ +D+A +F +++
Sbjct: 343 LSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDL 401
Query: 334 SSWNTMITGYGQNGDIAQARKLFD--MMPQR---DCVSWAAIISGYAQTGHYEEALNMFI 388
WNT+I G +N ++ +F+ +M Q D V+ I+ G E + +F
Sbjct: 402 IFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS 461
Query: 389 EI-KRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
+ K G + ++C + + + K I ++
Sbjct: 462 SMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKI 499
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 417 LGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI-------------------------- 450
L K +H Q+++ G+ + GN L +YFK GS+
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 451 -----GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT--M 503
A D+F+ + E+DVVSWNTMI+G GF + + VF M+ ++P E T +
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
+ L C G G +++ V +S ++D+ R G + A + M
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNS-----VMDMYRRLGVFDYALSVFLTME 196
Query: 564 FEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
+ SW L+ + GN E+ ++ +ME
Sbjct: 197 -DRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/611 (28%), Positives = 303/611 (49%), Gaps = 42/611 (6%)
Query: 66 RNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM----PQRDLVSWNV 121
+ G A VF+ MP R V++ A+ISG+++N KM D +
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 122 MLTGYVRNRRLGDAR--RLFDSMPQKDVVS-----WNAMLSGYAQNGYADEAREVFYQMP 174
+ G+ LG + R K+ ++ ++M S Y+++G EA F ++
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 175 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL---------ISWNCLMGGFVKRKML 225
++ SW ++A+ +G +EE+ +F WE+ + +CL+ K ML
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMF-----WEMQNKGMHPDGVVISCLINELGKM-ML 346
Query: 226 GAARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMVS 279
K F +R D N+++S Y + +S A+ LF + S + W M+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 280 GYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAREL----FEAMPSR 331
GY + + F ++ + + S ++++ + + + L +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+S N++I YG+ GD+ A ++F + ++W A+I+ Y E+A+ +F +
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
+ + T L C + +LE G+ IH + +T +E + AL+ MY KCG +
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
++ ++F+ +KD V WN MI+GY HG + A+ +F+ M+ VKP T + +LSAC+
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACT 645
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
HAGL+++G + F M++ Y V P+ KHY+C++DLL R+G LEEA+ + +MPF P W
Sbjct: 646 HAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIW 704
Query: 572 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
G LL + HG E+G + AE +P N G Y++L+N+Y+A+G+W +A R MR+
Sbjct: 705 GTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764
Query: 632 GVQKVTGYSWV 642
GV K G+S V
Sbjct: 765 GVGKRAGHSVV 775
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/581 (23%), Positives = 270/581 (46%), Gaps = 80/581 (13%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF--------- 108
+K+IS++ G + + RVF+ + RR +N++I + N ++ + F
Sbjct: 63 SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS 122
Query: 109 -DKMPQRDLVSWNVMLT----------------GYVRNRRLGDARRLFDSMPQKDVVSWN 151
D +VS L G+ RN +G + F
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYF------------ 170
Query: 152 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA----CRLFDSKSDW 207
Y++ G+ +A VF +MP ++ ++W +++ +V NG E C++ + SD
Sbjct: 171 -----YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDV 225
Query: 208 ELISWNCLMGGFVKRKMLGAAR--KLFDKMHVRDVVS-----WNTMISGYAQDGDMSQAK 260
+ + L GF LGA + + V++ ++ ++M S Y++ G+ S+A
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV-QSNKMD 319
F + +D+F+WT++++ ++G ++E+ F +M K +++ + + KM
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMM 345
Query: 320 MARE--LFEAMPSRNVSSW-----NTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAII 371
+ + F R+ S N++++ Y + ++ A KLF + + + +W ++
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 405
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
GY + + + + +F +I+ G ++ ++ + +S+C+ I A+ LGK +H VVKT +
Sbjct: 406 KGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
V N+L+ +Y K G + A +F + +V++WN MIA Y ++A+ +F+ M
Sbjct: 466 LTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRG-------TEYFYSMNKDYSVTPSSKHYTCMID 544
+ KP IT+V +L AC + G ++RG TE + MN S +ID
Sbjct: 525 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA--------LID 576
Query: 545 LLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
+ + G LE++++L + + A W ++ +HG+ E
Sbjct: 577 MYAKCGHLEKSRELF-DAGNQKDAVCWNVMISGYGMHGDVE 616
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/532 (20%), Positives = 213/532 (40%), Gaps = 102/532 (19%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM-----------PRRSSVSYNAMIS-GY 95
++ D D++ W +IS H++NG + L M PR + A + G
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 96 LRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLS 155
L+ R + + + V + M + Y ++ +A F + +D+ SW ++++
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQ-SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIA 304
Query: 156 GYAQNGYADEAREVFYQMPHK--------------------------------------- 176
A++G +E+ ++F++M +K
Sbjct: 305 SLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL 364
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSD-WELISWNCLMGGFVKRKMLGAARKLFDKM 235
++ N LL+ Y + A +LF S+ +WN ++ G+ K K +LF K+
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 236 --------------------HVRDVV-------------------SWNTMISGYAQDGDM 256
H+ V+ N++I Y + GD+
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 257 SQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----EISYNAMVAGY 312
+ A +F ++ +V TW AM++ YV ++A FD+M +N I+ ++
Sbjct: 485 TVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 313 VQSNKMD----MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWA 368
V + ++ + R + E N+S +I Y + G + ++R+LFD Q+D V W
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+ISGY G E A+ +F +++ TF LS C +E GK++ ++ +
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHG 479
+ + L+ + + G++ EA + D V W T+++ HG
Sbjct: 664 DVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHG 715
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 14/295 (4%)
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
S N+ + +I+ Y G + ++F ++ +RD W +II + G Y +L F
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK-TGYETGCFVGNALLGMYFKCG 448
+ G+S + T +S CA++ +G +HG V+K G++ VG + + Y KCG
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 449 SIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV---KPDEITMVG 505
+ +A VF+ + ++DVV+W +I+G+ ++G + L M + G KP+ T+
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 506 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE 565
ACS+ G + G + + S + M ++G EA R + E
Sbjct: 236 GFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDE 294
Query: 566 PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMY---VLLSNLYAASGR 617
SW +++ + G+ E++ +M ++M+ N GM+ V++S L G+
Sbjct: 295 -DMFSWTSIIASLARSGDM---EESFDMFWEMQ--NKGMHPDGVVISCLINELGK 343
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 21/245 (8%)
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 468
C +LE ++ + ++ G FV + L+ Y G ++ VF + +D+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
N++I + +G ++L F SM G PD T V+SAC+ GT + K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
++ + + G L++A + MP + +W A+ I G+ + GE
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAI-----ISGHVQNGE 207
Query: 589 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 648
+ + + H++G +D R + G Q + ++ +
Sbjct: 208 SEGGLGYLCKMHSAG---------------SDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Query: 649 HKFTV 653
H F V
Sbjct: 253 HGFAV 257
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/611 (26%), Positives = 307/611 (50%), Gaps = 37/611 (6%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N +IS + + G ++A VF + R +S NA+++G+ N F A + ++M D +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 118 SWNVM-------LTGYVRNRRLGDARRLFD---SMPQKDVVSWNAMLSGYAQNGYADEAR 167
++ + G + R G A + M + + N+++ Y + G +A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS-WNCLMGGFVKRKMLG 226
+F H++ +SWN +++A+ NG +A LF E++S ++C + L
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFK-----EVVSEYSC------SKFSLS 498
Query: 227 AARKLFDKMHVRDVVSWNTMISGYAQD-GDMSQA-KNLFDQSPHQDVFTWTAMVSGYVQN 284
+ D + + + + Q GD++ A L S +D+ +W +++SG +
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASS 558
Query: 285 GMLDEARTFFDQMPQKNEISYNAM-VAGYVQSN---KMDMARELFEAMPSRNVSSW---- 336
G E+ F M ++ +I ++ + + G + ++ + + F + +++
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 337 -NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
NT+IT YG+ DI A K+F ++ + SW +IS +Q E +F +K +
Sbjct: 619 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEP- 677
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
N TF LS + + G Q H +++ G++ FV AL+ MY CG +
Sbjct: 678 --NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAG 514
VF + +WN++I+ + HG G++A+ +F+ + + ++P++ + + +LSACSH+G
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
ID G Y+ M + + V P ++H ++D+LGRAG+L EA + + + A WGAL
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
L A HG+T+LG++ AE++F+MEP N+ Y+ L+N Y G W +A +R + D ++
Sbjct: 856 LSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 635 KVTGYSWVEVQ 645
K+ GYS ++V+
Sbjct: 916 KLPGYSVIDVR 926
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 158/664 (23%), Positives = 287/664 (43%), Gaps = 123/664 (18%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTM------------------------PRR 83
++K+ D++ WN +I+ +NG +A+ +F M R+
Sbjct: 147 ELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRK 206
Query: 84 SSVSY---------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVR 128
S+ + NA+++ Y + S A +F M RD+VSWN ++T +
Sbjct: 207 CSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLA 266
Query: 129 NRRLGDARRLFDSM-----------------------------------------PQKDV 147
N + + F SM P+ V
Sbjct: 267 NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHV 326
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 207
N+++S Y++ G + A VF ++ ++ IS N +L + NG EEA + +
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 208 E--------LISWNCLMGGFV----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
+ ++S + G R + G ++ +M R + N++I Y + G
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM--EMQSRALEVINSVIDMYGKCGL 444
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS 315
+QA+ LF + H+D+ +W +M+S + QNG +A+ F ++ + S ++
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 316 NKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA-RKLFDMMPQRDCVSWAAIISGY 374
D + L + ++V W + GD+ A +L M RD SW ++ISG
Sbjct: 505 TSCDSSDSL---IFGKSVHCWLQKL------GDLTSAFLRLETMSETRDLTSWNSVISGC 555
Query: 375 AQTGHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG 433
A +GH+ E+L F + R+G+ + T +S ++ + G+ HG +K+ E
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELD 615
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
+ N L+ MY +C I A VF I + ++ SWN +I+ +++ G++ +F ++K
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK- 674
Query: 494 IGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
++P+EIT VG+LSA + G G + + + + + + P ++D+ G L
Sbjct: 675 --LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGML 730
Query: 553 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFK-------MEPHNSGMY 605
E + RN +A W +++ A HG +GEKA E+ FK MEP+ S
Sbjct: 731 ETGMKVFRNSGVNSISA-WNSVISAHGFHG---MGEKAMEL-FKELSSNSEMEPNKSSFI 785
Query: 606 VLLS 609
LLS
Sbjct: 786 SLLS 789
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 155/664 (23%), Positives = 287/664 (43%), Gaps = 93/664 (14%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
DL +K+++ + R G S+ +F+ + + + +N+MI+ +N R+ A LF +M
Sbjct: 121 DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMI 180
Query: 113 QR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAMLSGYAQNGYAD 164
+ D + + + L + +V NA+++ YA+
Sbjct: 181 HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLS 240
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFV 220
A VF M H++ +SWN ++ + NG ++ + F S + + + ++++C++
Sbjct: 241 SAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
Query: 221 KRKMLGAARKLF---------DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
+ L L + HV N++IS Y++ GD A+ +F++ +DV
Sbjct: 301 SIEELTLGESLHGLVIKSGYSPEAHVS---VGNSIISMYSKCGDTEAAETVFEELVCRDV 357
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS--NKMDMARE------ 323
+ A+++G+ NGM +EA +QM ++I + + S + +RE
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 324 --LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYE 381
+ M SR + N++I YG+ G QA LF RD VSW ++IS ++Q G
Sbjct: 418 YTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 382 EALNMFIEIKRD--GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
+A N+F E+ + + ST L++C +L GK +H + K G T F+
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLE 537
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKP 498
+ E +D+ SWN++I+G A G ++L F++M G ++
Sbjct: 538 TMS------------------ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRH 579
Query: 499 DEITMVGVLSACSHAGLIDRGTEY---------------------FYSMNKDYSVT---- 533
D IT++G +SA + GL+ +G + Y KD
Sbjct: 580 DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF 639
Query: 534 -----PSSKHYTCMIDLLG--RAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTEL 586
P+ + C+I L +AGR E L RN+ EP ++ LL AS G+T
Sbjct: 640 GLISDPNLCSWNCVISALSQNKAGR--EVFQLFRNLKLEPNEITFVGLLSASTQLGSTSY 697
Query: 587 GEKA-AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQ 645
G +A ++ + N + L ++Y++ G + R+ GV ++ ++ V
Sbjct: 698 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKV---FRNSGVNSISAWNSVISA 754
Query: 646 NKIH 649
+ H
Sbjct: 755 HGFH 758
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 178/360 (49%), Gaps = 14/360 (3%)
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
++D+ + + +++ Y + G++ + LFD+ +DV W +M++ QNG A F +
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 297 MPQK-NEISYNAMVAGYVQSNKMDMAREL-------FEAMPSRNVSSWNTMITGYGQNGD 348
M K NE ++ + + ++R+ E + S N ++ Y + +
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 408
++ A +F M RD VSW I++ GH ++L F + G+ + TFSC +S
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 409 CADIAALELGKQIHGQVVKTGY--ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 466
C+ I L LG+ +HG V+K+GY E VGN+++ MY KCG A VFE + +DV+
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 467 SWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRG-TEYFY 524
S N ++ G+A +G ++A + M+++ ++PD T+V + S C G + Y
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 525 SMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNT 584
++ + + + + +ID+ G+ G +A+ L + SW +++ A +G T
Sbjct: 419 TVRMEMQ-SRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMISAFSQNGFT 476
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 199/415 (47%), Gaps = 45/415 (10%)
Query: 114 RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM 173
+DL + + +LT Y R L + LFD + +KDV+ WN+M++ QNG A +F +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 174 PHKNA---ISWNGLLAAYVHNGRIEEACRLFDSKS-------DWELISWNCLMGGFVKRK 223
HK + L A+ + + + C + + D L N LM + K +
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC--NALMNLYAKGE 237
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTWTAMVS 279
L +A +F M RD+VSWNT+++ +G + K++ D T++ ++S
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTM 339
A + +++ + + +GY P +VS N++
Sbjct: 298 ----------ACSSIEELTLGESLHGLVIKSGY---------------SPEAHVSVGNSI 332
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR-DGESLN 398
I+ Y + GD A +F+ + RD +S AI++G+A G +EEA + +++ D +
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF-VGNALLGMYFKCGSIGEANDVF 457
+T S C D++ G+ +HG V+ ++ V N+++ MY KCG +A +F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 458 EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT--IGVKPDEITMVGVLSAC 510
+ +D+VSWN+MI+ ++++GF +A +F+ + + K T++ +L++C
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 153/365 (41%), Gaps = 34/365 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL----- 107
DL WN VIS +GH +LR F M R + ++ + +A +L L
Sbjct: 544 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 603
Query: 108 ----FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
+ + D N ++T Y R + + A ++F + ++ SWN ++S +QN
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 164 DEAREVFYQMP-HKNAISWNGLLAAYVHNGR----IEEACRLFDSKSDWELISWNCLMGG 218
E ++F + N I++ GLL+A G ++ C L L+
Sbjct: 664 REVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDM 723
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ-------SPHQDV 271
+ ML K+F V + +WN++IS + G +A LF + P++
Sbjct: 724 YSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSS 783
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNA-----MVAGYVQSNKMDMARELFE 326
F +++S +G +DE +++ QM +K + +V ++ K+ A E
Sbjct: 784 F--ISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 327 AM-PSRNVSSWNTMITGYGQNGDIAQARK----LFDMMPQRDCVSWAAIISGYAQTGHYE 381
+ + W +++ +GD ++ LF+M P + + ++ + Y G +E
Sbjct: 842 GIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD-NASYYISLANTYVGLGGWE 900
Query: 382 EALNM 386
EA+ +
Sbjct: 901 EAVRL 905
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/599 (28%), Positives = 294/599 (49%), Gaps = 61/599 (10%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM 111
P + N+ I + + G D A +F MP R S+NA+I+ +N +F +M
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 112 PQRDLV-----------------------------------SWNV-----MLTGYVRNRR 131
RD V S NV ++ Y + R
Sbjct: 154 -NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY--- 188
+ DARR+FD + VSWN ++ Y + G+ DEA +F++M N N +++
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272
Query: 189 ------VHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 242
+ G++ A + S ++S + +VK L +AR++FD+ +D+ S
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVS-TSVFDMYVKCDRLESARRVFDQTRSKDLKS 331
Query: 243 WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE 302
W + +SGYA G +A+ LFD P +++ +W AM+ GYV DEA F M Q+ E
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE 391
Query: 303 ISYNAMVAGYVQS----NKMDMARE----LFEAMPSRNVSSWNTMITGYGQNGDIAQARK 354
N + + + + M ++ ++ NV N ++ YG+ G + A
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 355 LFDMMPQ-RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
F M + RD VSW A+++G A+ G E+AL+ F ++ + + ++ T + L+ CA+I
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKP-SKYTLATLLAGCANIP 510
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
AL LGK IHG +++ GY+ + A++ MY KC A +VF+ +D++ WN++I
Sbjct: 511 ALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIR 570
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
G R+G K+ +F ++ GVKPD +T +G+L AC G ++ G +YF SM+ Y ++
Sbjct: 571 GCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHIS 630
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
P +HY CMI+L + G L + ++ + MPF+PP + A + + ++LG AA+
Sbjct: 631 PQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAK 689
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 213/426 (50%), Gaps = 51/426 (11%)
Query: 143 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 202
P + N + Y + G D+ARE+F +MP ++ SWN ++ A NG +E R+F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 203 SKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSW---------NTMISGYAQD 253
+ + + G +K L +L ++H VV + +++ Y +
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC-AVVKYGYSGNVDLETSIVDVYGKC 210
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAG-- 311
MS A+ +FD+ + +W +V Y++ G DEA F +M + N N V+
Sbjct: 211 RVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Query: 312 -------------------------------------YVQSNKMDMARELFEAMPSRNVS 334
YV+ ++++ AR +F+ S+++
Sbjct: 271 LACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLK 330
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
SW + ++GY +G +AR+LFD+MP+R+ VSW A++ GY ++EAL+ ++++
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
E+++ T L+ C+ I+ +++GKQ HG + + GY+T V NALL MY KCG++ AN
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN 450
Query: 455 DVFEGIEE-KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
F + E +D VSWN ++ G AR G +QAL FE M+ + KP + T+ +L+ C++
Sbjct: 451 IWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANI 509
Query: 514 GLIDRG 519
++ G
Sbjct: 510 PALNLG 515
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 153/320 (47%), Gaps = 7/320 (2%)
Query: 310 AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAA 369
A VQ+ K+ F +P + N I YG+ G + AR+LF+ MP+RD SW A
Sbjct: 75 ALVVQARKVQSHLVTFSPLPP--IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNA 132
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
+I+ AQ G +E MF + RDG ++F+ L +C I L L +Q+H VVK G
Sbjct: 133 VITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYG 192
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
Y + +++ +Y KC + +A VF+ I VSWN ++ Y GF +A+++F
Sbjct: 193 YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFF 252
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
M + V+P T+ V+ ACS + ++ G + +++ SV + T + D+ +
Sbjct: 253 KMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKC 311
Query: 550 GRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLS 609
RLE A+ + + SW + + + G L +A E+ M N + +
Sbjct: 312 DRLESARRVF-DQTRSKDLKSWTSAMSGYAMSG---LTREARELFDLMPERNIVSWNAML 367
Query: 610 NLYAASGRWADAGNMRSRMR 629
Y + W +A + + MR
Sbjct: 368 GGYVHAHEWDEALDFLTLMR 387
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 173/425 (40%), Gaps = 82/425 (19%)
Query: 261 NLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM 320
+L SP +F + Y + G +D+AR F++MP+++ S+NA++ Q+ D
Sbjct: 86 HLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDE 145
Query: 321 ARELFEAMPSRNVSSWNTMITG-----------------------YGQNGDI-------- 349
+F M V + T G YG +G++
Sbjct: 146 VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 350 --------AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE-IKRDGESLNRS 400
+ AR++FD + VSW I+ Y + G +EA+ MF + ++ + LN
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH- 264
Query: 401 TFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGI 460
T S + C+ ALE+GK IH VK V ++ MY KC + A VF+
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 461 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV------------------------ 496
KD+ SW + ++GYA G ++A +F+ M +
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 497 -------KPDEITMVGVLSACSHAGLIDRGTE---YFYSMNKDYSVTPSSKHYTCMIDLL 546
D +T+V +L+ CS + G + + Y D +V ++ ++D+
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANA----LLDMY 440
Query: 547 GRAGRLEEAQDLMRNMPFEPPAASWGALL-GASRIHGNTELGEKAAE-MVFKMEPHNSGM 604
G+ G L+ A R M SW ALL G +R+ G +E E M + +P +
Sbjct: 441 GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV-GRSEQALSFFEGMQVEAKPSKYTL 499
Query: 605 YVLLS 609
LL+
Sbjct: 500 ATLLA 504
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 145/339 (42%), Gaps = 31/339 (9%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD 109
+ DL W +S + +G A +F+ MP R+ VS+NAM+ GY+ + A D
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 110 KMPQR----DLVS--WNVMLTGYVRNRRLGDARR--LFDSMPQKDVVSWNAMLSGYAQNG 161
M Q D V+ W + + + + ++G ++ +V+ NA+L Y + G
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 162 YADEAREVFYQMPH-KNAISWNGLLAAYVHNGRIEEACRLFD------SKSDWELISWNC 214
A F QM ++ +SWN LL GR E+A F+ S + L +
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLAT--- 501
Query: 215 LMGGFVKRKMLGAARK----LFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 270
L+ G L + L + DVV M+ Y++ A +F ++ +D
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD 561
Query: 271 VFTWTAMVSGYVQNGMLDEARTFF----DQMPQKNEISYNAMVAGYVQSNKMDMARELFE 326
+ W +++ G +NG E F ++ + + +++ ++ ++ +++ + F
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 327 AMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMMP 360
+M ++ V ++ MI Y + G + Q + +MP
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVS 467
+C+ A + +++ +V F+ N + Y KCG + +A ++FE + E+D S
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGS 129
Query: 468 WNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLI--DRGTEYFYS 525
WN +I A++G + +F M GV+ E + GVL +C GLI R +
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQLHC 186
Query: 526 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
Y + + T ++D+ G+ + +A+ + + P SW ++ R +
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV---RRYLEMG 242
Query: 586 LGEKAAEMVFKMEPHN 601
++A M FKM N
Sbjct: 243 FNDEAVVMFFKMLELN 258
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 290/578 (50%), Gaps = 84/578 (14%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
D+ + +++ Y++ +++ DA ++ D MP++ + S NA +SG +NG+ +A ++M
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDA----FRMF 120
Query: 175 HKNAISWNGLLAAYVHN-----GRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
+S +G+ + V + G IE +L +CL A +
Sbjct: 121 GDARVSGSGMNSVTVASVLGGCGDIEGGMQL------------HCL-----------AMK 157
Query: 230 KLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE 289
F+ +V +++S Y++ G+ A +F++ PH+ V T+ A +SG ++NG+++
Sbjct: 158 SGFE----MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 290 ARTFFDQM-----PQKNEISYNAMVAGYVQSNKMDMAREL----------FEAM------ 328
+ F+ M + N++++ + + R+L FE M
Sbjct: 214 VPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALI 273
Query: 329 --------------------PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DC 364
+RN+ SWN++I+G NG A +LF+ + D
Sbjct: 274 DMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDS 333
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
+W ++ISG++Q G EA F + + + LS C+DI L+ GK+IHG
Sbjct: 334 ATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGH 393
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK--DVVSWNTMIAGYARHGFGK 482
V+K E FV +L+ MY KCG A +F+ E K D V WN MI+GY +HG +
Sbjct: 394 VIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECE 453
Query: 483 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCM 542
A+ +FE ++ V+P T VLSACSH G +++G++ F M ++Y PS++H CM
Sbjct: 454 SAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513
Query: 543 IDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS 602
IDLLGR+GRL EA++++ M + +LLG+ R H + LGE+AA + ++EP N
Sbjct: 514 IDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENP 572
Query: 603 GMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
+V+LS++YAA RW D ++R + + K+ G S
Sbjct: 573 APFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 201/467 (43%), Gaps = 102/467 (21%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRN-------RRLGDARRLFDS 141
A++S Y++ + + A + D+MP+R + S N ++G + N R GDAR
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 142 MPQKDVVS---------------WNAMLSGYAQNGYADE--------------AREVFYQ 172
M V S AM SG+ Y A +F +
Sbjct: 130 MNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEK 189
Query: 173 MPHKNAISWNGLLAAYVHNG------RIEEACRLFDSKSDWELISWNCL----------- 215
+PHK+ +++N ++ + NG + R F S+ ++ N +
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 216 ---MGGFVKRK------MLG--------------AARKLFDKMH-VRDVVSWNTMISGYA 251
+ G V +K M+G +A +F ++ R+++SWN++ISG
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 252 QDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQM------PQKN 301
+G A LF++ + D TW +++SG+ Q G + EA FF++M P
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 302 EIS--YNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM 359
++ +A + N ++ + +A R++ ++I Y + G + AR++FD
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 360 -PQ-RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALEL 417
P+ +D V W +ISGY + G E A+ +F ++ + + +TF+ LS C+ +E
Sbjct: 430 EPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 418 GKQIHGQVVKT-GYE-----TGCFVGNALLGMYFKCGSIGEANDVFE 458
G QI + + GY+ GC + LLG + G + EA +V +
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMID--LLG---RSGRLREAKEVID 531
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 162/333 (48%), Gaps = 30/333 (9%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-----P 112
++S + R G A R+F +P +S V+YNA ISG + N +L +F+ M
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE 227
Query: 113 QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEARE 168
+ + V++ +T L R+L + +K + + A++ Y++ A
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 169 VFYQMPH-KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI-----SWNCLMGGFVKR 222
VF ++ +N ISWN +++ + NG+ E A LF+ K D E + +WN L+ GF +
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFE-KLDSEGLKPDSATWNSLISGFSQL 346
Query: 223 KMLGAARKLFDKM-HVRDVVSWNTMISGYAQDGDMSQAKN-------LFDQSPHQDVFTW 274
+ A K F++M V V S + S + D+ KN + + +D+F
Sbjct: 347 GKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVL 406
Query: 275 TAMVSGYVQNGMLDEARTFFDQM-PQ-KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
T+++ Y++ G+ AR FD+ P+ K+ + +N M++GY + + + A E+FE +
Sbjct: 407 TSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEK 466
Query: 333 V----SSWNTMITGYGQNGDIAQARKLFDMMPQ 361
V +++ +++ G++ + ++F +M +
Sbjct: 467 VEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 47/351 (13%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS-----VSYNAMISGYLRNARFSL 103
V ++ +N IS M NG + VFN M + SS V++ I+
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 104 ARDL----FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP-QKDVVSWNAMLSGYA 158
R L K Q + + ++ Y + R A +F + ++++SWN+++SG
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI-SWN 213
NG + A E+F ++ + ++ +WN L++ + G++ EA + F+ ++ S
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 214 CLMGGFVKRKMLGAARKLFDKM-------HV------RDVVSWNTMISGYAQDGDMSQAK 260
CL +L A ++ HV RD+ ++I Y + G S A+
Sbjct: 370 CL------TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWAR 423
Query: 261 NLFDQ---SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM-PQKNEIS---YNAMVAGYV 313
+FD+ P VF W M+SGY ++G + A F+ + +K E S + A+++
Sbjct: 424 RIFDRFEPKPKDPVF-WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 314 QSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGDIAQARKLFDMM 359
++ ++F M + MI G++G + +A+++ D M
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
S N+ TF L +CA + + G+ +H QVVKTG+ F AL+ MY K + +A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 456 VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
V + + E+ + S N ++G +GF + A +F + G + +T+ VL C
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 50/204 (24%)
Query: 48 DVKDP-DLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS 102
++KD +L+ WN VIS M NG ++A+ +F + + S ++N++ISG+ + +
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 103 LARDLFDKM---------------------------------------PQRDLVSWNVML 123
A F++M +RD+ ++
Sbjct: 351 EAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLI 410
Query: 124 TGYVRNRRLGDARRLFDSM-PQ-KDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA--- 178
Y++ ARR+FD P+ KD V WN M+SGY ++G + A E+F + +
Sbjct: 411 DMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPS 470
Query: 179 -ISWNGLLAAYVHNGRIEEACRLF 201
++ +L+A H G +E+ ++F
Sbjct: 471 LATFTAVLSACSHCGNVEKGSQIF 494
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 217/385 (56%), Gaps = 31/385 (8%)
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
IE+ G +R F +CA++ +LE K++H +++ + + N ++ M+ +C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 448 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
SI +A VF+ + +KD+ SW+ M+ Y+ +G G AL +FE M G+KP+E T + V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 567
AC+ G I+ +F SM ++ ++P ++HY ++ +LG+ G L EA+ +R++PFEP
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 568 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM-RS 626
A W A+ +R+HG+ +L + E++ ++P + +++ + + NM S
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA----VINKIPTPPPKSFKETNMVTS 460
Query: 627 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 686
+ R + + +T Y + K V YV T+
Sbjct: 461 KSRILEFRNLTFYKDEAKEMAAKKGVV--------------------------YVPDTRF 494
Query: 687 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVG 746
VLHD+++E KE L YHSE+LA+A+GI+ P + + +IKNLRVC DCHN IK +SKI+G
Sbjct: 495 VLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIG 554
Query: 747 RLIILRDSHRFHHFNEGICSCGDYW 771
R++I+RD+ RFHHF +G CSCGDYW
Sbjct: 555 RVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
N +I+ +G+ I A+++FD M +D SW ++ Y+ G ++AL++F E+ + G
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 397 LNRSTFSCALSTCADIAALELG-------KQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
N TF CA + +E K HG KT + G +LG+ KCG
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLG------VLGVLGKCGH 388
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYAR-HG 479
+ EA + + + + YAR HG
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 286/561 (50%), Gaps = 58/561 (10%)
Query: 113 QRDLVSWNVMLTGYVRNRRLGD--------------ARRLFDSMPQKDVVSWNAMLSGYA 158
Q L+ N + G+ N +L D AR+LFD + ++DVVSW AM+S ++
Sbjct: 30 QLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFS 89
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELI 210
+ GY +A +F +M + N ++ +L + G ++E ++ S LI
Sbjct: 90 RCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD----QS 266
+ L+ + + + AR FD M RD+VSWN MI GY + + +LF +
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG 209
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFE 326
D FT+ G L A + +E+ A+ G+ +S+ +
Sbjct: 210 KKPDCFTF----------GSLLRASIVVKCLEIVSELHGLAIKLGFGRSSAL-------- 251
Query: 327 AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH-YEEALN 385
+++ Y + G +A A KL + +RD +S A+I+G++Q + +A +
Sbjct: 252 ---------IRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFD 302
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMY 444
+F ++ R ++ S L C IA++ +G+QIHG +K+ +GN+L+ MY
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMY 362
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
K G I +A FE ++EKDV SW ++IAGY RHG ++A+ ++ M+ +KP+++T +
Sbjct: 363 AKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFL 422
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP- 563
+LSACSH G + G + + +M + + +H +C+ID+L R+G LEEA L+R+
Sbjct: 423 SLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEG 482
Query: 564 -FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAG 622
+++WGA L A R HGN +L + AA + MEP Y+ L+++YAA+G W +A
Sbjct: 483 IVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNAL 542
Query: 623 NMRSRMRDVG-VQKVTGYSWV 642
N R M++ G K GYS V
Sbjct: 543 NTRKLMKESGSCNKAPGYSLV 563
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 207/477 (43%), Gaps = 84/477 (17%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRD---- 115
+I +++ G A ++F+ + +R VS+ AMIS + R A LF +M + D
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 116 -----------------------------------LVSWNVMLTGYVRNRRLGDARRLFD 140
L+ + +L+ Y R ++ +AR FD
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 141 SMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEE 196
SM ++D+VSWNAM+ GY N AD + +F M + ++ LL A + +E
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 197 ACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDM 256
L G + G + L ++++ Y + G +
Sbjct: 233 VSELH----------------GLAIKLGFGRSSALI-----------RSLVNAYVKCGSL 265
Query: 257 SQAKNLFDQSPHQDVFTWTAMVSGYV-QNGMLDEARTFFDQM----PQKNEISYNAMVAG 311
+ A L + + +D+ + TA+++G+ QN +A F M + +E+ ++M+
Sbjct: 266 ANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKI 325
Query: 312 YVQSNKMDMAREL--FEAMPSR---NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS 366
+ + R++ F S+ +V+ N++I Y ++G+I A F+ M ++D S
Sbjct: 326 CTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS 385
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
W ++I+GY + G++E+A++++ ++ + N TF LS C+ ELG +I+ ++
Sbjct: 386 WTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMI 445
Query: 427 -KTGYETGCFVGNALLGMYFKCGSIGEANDVF---EGIEEKDVVSWNTMIAGYARHG 479
K G E + ++ M + G + EA + EGI +W + RHG
Sbjct: 446 NKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 267/508 (52%), Gaps = 41/508 (8%)
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
S+N +LS YA D+ R + +K +S NG + +AC F + +
Sbjct: 73 SYNTLLSSYA---VCDKPRVTIF--AYKTFVS-NGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
I GF +D ++V+ N+++ Y G+ A +F + P
Sbjct: 127 QIHGIVTKMGF------------YDDIYVQ-----NSLVHFYGVCGESRNACKVFGEMPV 169
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMARELFEA 327
+DV +WT +++G+ + G+ EA F +M + N +Y ++ + + + + +
Sbjct: 170 RDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGL 229
Query: 328 MPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEA 383
+ R ++ + N +I Y + ++ A ++F + ++D VSW ++ISG +EA
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEA 289
Query: 384 LNMFI------EIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
+++F IK DG L + LS CA + A++ G+ +H ++ G + +G
Sbjct: 290 IDLFSLMQTSSGIKPDGHIL-----TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 497
A++ MY KCG I A ++F GI K+V +WN ++ G A HG G ++L FE M +G K
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 498 PDEITMVGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 556
P+ +T + L+AC H GL+D G YF+ M +++Y++ P +HY CMIDLL RAG L+EA
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 557 DLMRNMPFEPPAASWGALLGASRIHGNT-ELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
+L++ MP +P GA+L A + G EL ++ + +E +SG+YVLLSN++AA+
Sbjct: 465 ELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Query: 616 GRWADAGNMRSRMRDVGVQKVTGYSWVE 643
RW D +R M+ G+ KV G S++E
Sbjct: 525 RRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 166/387 (42%), Gaps = 50/387 (12%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS 205
D+ N+++ Y G + A +VF +MP ++ +SW G++ + G +EA F SK
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTF-SKM 198
Query: 206 DWE--LISWNCLM--GGFVKRKMLGAARK--LFDKMHVRDVVSWNTMISGYAQDGDMSQA 259
D E L ++ C++ G V LG + + + + + N +I Y + +S A
Sbjct: 199 DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDA 258
Query: 260 KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS---- 315
+F + +D +W +M+SG V EA F M + I + + V S
Sbjct: 259 MRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Query: 316 -NKMDMARELFEAMPSRNVSSWNT-----MITGYGQNGDIAQARKLFDMMPQRDCVSWAA 369
+D R + E + + + W+T ++ Y + G I A ++F+ + ++ +W A
Sbjct: 319 LGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
++ G A GH E+L F E+ + G N TF AL+ C ++ G++ ++
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE 437
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFE 489
Y ++F +E + MI R G +AL E
Sbjct: 438 Y------------------------NLFPKLEH-----YGCMIDLLCRAGLLDEAL---E 465
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLI 516
+K + VKPD +LSAC + G +
Sbjct: 466 LVKAMPVKPDVRICGAILSACKNRGTL 492
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 37/372 (9%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
D+ N ++ + G +A +VF MP R VS+ +I+G+ R + A D F KM
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 113 -QRDLVSWNVML--TGYVRNRRLGDARR--LFDSMPQKDVVSWNAMLSGYAQNGYADEAR 167
+ +L ++ +L +G V LG + + + NA++ Y + +A
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 168 EVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGA 227
VF ++ K+ +SWN +++ VH R +EA LF I + G + +L A
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD----GHILTSVLSA 315
Query: 228 ARKLFDKMHVRDV--------VSWNT-----MISGYAQDGDMSQAKNLFDQSPHQDVFTW 274
L H R V + W+T ++ YA+ G + A +F+ ++VFTW
Sbjct: 316 CASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTW 375
Query: 275 TAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPS 330
A++ G +G E+ +F++M + N +++ A + + +D R F M S
Sbjct: 376 NALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKS 435
Query: 331 R------NVSSWNTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHY--- 380
R + + MI + G + +A +L MP + D AI+S G
Sbjct: 436 REYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMEL 495
Query: 381 -EEALNMFIEIK 391
+E L+ F++I+
Sbjct: 496 PKEILDSFLDIE 507
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 22/296 (7%)
Query: 337 NTMITGYGQNGDIAQARK--LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
N ++T G++ D A L + S+ ++S YA + + +G
Sbjct: 42 NKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNG 101
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
S + TF C + + GKQIHG V K G+ +V N+L+ Y CG A
Sbjct: 102 FSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNAC 161
Query: 455 DVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
VF + +DVVSW +I G+ R G K+AL F M V+P+ T V VL + G
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
+ G + K S+ S + +ID+ + +L +A + + + SW ++
Sbjct: 219 CLSLGKGIHGLILKRASLI-SLETGNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSM 276
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPHNSGM----YVLLSNLYAAS-------GRWA 619
+ + +H E ++A ++ F + +SG+ ++L S L A + GRW
Sbjct: 277 I-SGLVH--CERSKEAIDL-FSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV 328
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 235/431 (54%), Gaps = 22/431 (5%)
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVS---- 279
A ++F + +V+ +N MI Y+ G ++ + F + D +T+ ++
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 280 ------GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
G +G L RT F ++ + +V Y +M A+++F+ M RNV
Sbjct: 115 LSDLRFGKCVHGEL--IRTGFHRLGKIR----IGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 334 SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
WN MI G+ +GD+ + LF M +R VSW ++IS ++ G EAL +F E+
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLGMYFKCGSIGE 452
G + +T L A + L+ GK IH +G ++ VGNAL+ Y K G +
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 453 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACS 511
A +F ++ ++VVSWNT+I+G A +G G+ + +F++M G V P+E T +GVL+ CS
Sbjct: 289 ATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCS 348
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
+ G ++RG E F M + + + ++HY M+DL+ R+GR+ EA ++NMP AA W
Sbjct: 349 YTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMW 408
Query: 572 GALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDV 631
G+LL A R HG+ +L E AA + K+EP NSG YVLLSNLYA GRW D +R+ M+
Sbjct: 409 GSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 468
Query: 632 GVQKVTGYSWV 642
++K TG S +
Sbjct: 469 RLRKSTGQSTI 479
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 174/395 (44%), Gaps = 44/395 (11%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRI 194
A R+F + +V+ +NAM+ Y+ G E+ F M + G+ A +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSR------GIWADEYTYAPL 108
Query: 195 EEACRLFDSKSDWELISWNCLMGGFVKRKM-------------------LGAARKLFDKM 235
++C S SD C+ G ++ +G A+K+FD+M
Sbjct: 109 LKSC---SSLSDLRF--GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF- 294
R+VV WN MI G+ GD+ + +LF Q + + +W +M+S + G EA F
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 295 ---DQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITGYGQN 346
DQ +E + ++ +D + + S ++ N ++ Y ++
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 347 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE-SLNRSTFSCA 405
GD+ A +F M +R+ VSW +ISG A G E +++F + +G+ + N +TF
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 406 LSTCADIAALELGKQIHGQVV-KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-EK 463
L+ C+ +E G+++ G ++ + E A++ + + G I EA + +
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 498
+ W ++++ HG K A + +M+ + ++P
Sbjct: 404 NAAMWGSLLSACRSHGDVKLAEVA--AMELVKIEP 436
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 175/398 (43%), Gaps = 53/398 (13%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLF 108
+++P++L +N +I + G +L F++M R + + L++ SL+ F
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCS-SLSDLRF 120
Query: 109 DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
K +L+ TG+ RLG R ++ Y G +A++
Sbjct: 121 GKCVHGELIR-----TGF---HRLGKIRI--------------GVVELYTSGGRMGDAQK 158
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVK----RKM 224
VF +M +N + WN ++ + +G +E LF S+ ++SWN ++ K R+
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF-----TWTAMVS 279
L ++ D+ D + T++ A G + K + + +F A+V
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVS 334
Y ++G L+ A F +M ++N +S+N +++G + K + +LF+AM N +
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDCVS-----WAAIISGYAQTGHYEEALNMFIE 389
++ ++ G + + +LF +M +R + + A++ +++G EA F
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA---FKF 395
Query: 390 IKRDGESLNRSTFSCALSTC--------ADIAALELGK 419
+K + N + + LS C A++AA+EL K
Sbjct: 396 LKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 24/260 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
++ + +++ WN +I +G + L +F M RS VS+N+MIS + R A +L
Sbjct: 162 EMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALEL 221
Query: 108 FDKMPQRDL-VSWNVMLTGYVRNRRLG--DARRLFDSMPQ-----KDVVS-WNAMLSGYA 158
F +M + ++T + LG D + S + KD ++ NA++ Y
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWN----- 213
++G + A +F +M +N +SWN L++ NG+ E LFD+ + ++ N
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
Query: 214 -----CLMGGFVKR--KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
C G V+R ++ G + F K+ R + M+ ++ G +++A
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMERF-KLEAR-TEHYGAMVDLMSRSGRITEAFKFLKNM 399
Query: 267 P-HQDVFTWTAMVSGYVQNG 285
P + + W +++S +G
Sbjct: 400 PVNANAAMWGSLLSACRSHG 419
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 253 bits (646), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/687 (28%), Positives = 312/687 (45%), Gaps = 110/687 (16%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS------VSYNAMISGYLRNARFSLARD 106
D++ WN ++S +NG +AL +F+ M RS VS +I + + + R
Sbjct: 165 DVVTWNTMVSGLAQNGCSSAALLLFHDM--RSCCVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Query: 107 LFDKMPQRDLVSW--NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
L + ++ + + ++ Y L A +F+ + +KD SW M++ YA NG+ +
Sbjct: 223 LHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 165 EAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLM 216
E E+F M + N ++ L A + G + + + D LI LM
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLM 342
Query: 217 GGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------------- 263
+ K L A +LF + RDVVSW+ MI+ Y Q G +A +LF
Sbjct: 343 SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAV 402
Query: 264 -----------------DQSPH---------QDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
+S H ++ T TA++S Y + G A F+++
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 298 PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITG--------------- 342
P K+ +++NA+ GY Q + A ++++ M V + + G
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 343 --YGQ------NGDIAQARKLFDMMPQRDC-----------------VSWAAIISGYAQT 377
YGQ + + A L +M + D VSW +++GY
Sbjct: 523 CVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G EEA+ F ++K + N TF + A+++AL +G +H +++ G+ + VG
Sbjct: 583 GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG 642
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVK 497
N+L+ MY KCG I + F I K +VSWNTM++ YA HG A+ +F SM+ +K
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 498 PDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQD 557
PD ++ + VLSAC HAGL++ G F M + + + +HY CM+DLLG+AG EA +
Sbjct: 703 PDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVE 762
Query: 558 LMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGR 617
+MR M + WGALL +SR+H N L A + K+EP N Y+ R
Sbjct: 763 MMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRR 815
Query: 618 WADAGNMRSRMRDVGVQKVTGYSWVEV 644
+ N+ SR ++KV SW+EV
Sbjct: 816 LGEVNNV-SR-----IKKVPACSWIEV 836
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/595 (25%), Positives = 249/595 (41%), Gaps = 113/595 (18%)
Query: 74 LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
L+V ++ +N +I+ Y R L+R +FD + +V WN M+ GY R
Sbjct: 22 LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR 81
Query: 134 DARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLA------- 186
+A F M ++ + + +A A M K + + L+A
Sbjct: 82 EALGFFGYMSEEKGIDPDKYSFTFALKACAG-------SMDFKKGLRIHDLIAEMGLESD 134
Query: 187 AYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTM 246
Y+ +E C+ D L +AR++FDKMHV+DVV+WNTM
Sbjct: 135 VYIGTALVEMYCKARD----------------------LVSARQVFDKMHVKDVVTWNTM 172
Query: 247 ISGYAQDGDMSQAKNLFDQS-------PHQDVFTWTAMVS------------------GY 281
+SG AQ+G S A LF H ++ VS G+
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 282 V---QNGMLD---------EARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMP 329
+ +G++D A + F+++ +K+E S+ M+A Y + + ELF+ M
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 330 SR---------------------------------------NVSSWNTMITGYGQNGDIA 350
+ +VS ++++ Y + G++
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
A +LF + RD VSW+A+I+ Y Q G ++EA+++F ++ R N T + L CA
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
+AA LGK IH +K E+ A++ MY KCG A FE + KD V++N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
+ GY + G +A V+++MK GV PD TMVG+L C+ RG+ + + K +
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-H 531
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
+I++ + L A L FE SW ++ +HG E
Sbjct: 532 GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 161/647 (24%), Positives = 273/647 (42%), Gaps = 105/647 (16%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTM-------PRRSSVSYN-AMISGYLRNAR 100
V+DP ++ WN +I + R G AL F M P + S ++ +G + +
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 101 FSLARDLFDKMP-QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
DL +M + D+ ++ Y + R L AR++FD M KDVV+WN M+SG AQ
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 160 NGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDS---KSDWELISW 212
NG + A +F+ M + +S L+ A V + CR K +
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA-VSKLEKSDVCRCLHGLVIKKGFIFAFS 237
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD-------- 264
+ L+ + L AA +F+++ +D SW TM++ YA +G + LFD
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 265 -------------------------------QSPHQDVFTWTAMVSGYVQNGMLDEARTF 293
Q DV T+++S Y + G L+ A
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 294 FDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAM-----------------------PS 330
F + ++ +S++AM+A Y Q+ + D A LF M S
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 331 R----------------NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
R + + +I+ Y + G + A K F+ +P +D V++ A+ GY
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGY 477
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
Q G +A +++ +K G + T L TCA + G ++GQ++K G+++ C
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC 537
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
V +AL+ M+ KC ++ A +F+ EK VSWN M+ GY HG ++A+ F MK
Sbjct: 538 HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKV 597
Query: 494 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD--YSVTPSSKHYTCMIDLLGRAGR 551
+P+ +T V ++ A + + G S+ + S TP ++D+ + G
Sbjct: 598 EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS---LVDMYAKCGM 654
Query: 552 LEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
+E ++ + SW +L A HG L A + M+
Sbjct: 655 IESSEKCFIEIS-NKYIVSWNTMLSAYAAHG---LASCAVSLFLSMQ 697
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 219/495 (44%), Gaps = 49/495 (9%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI 179
N ++ Y +R +R +FDS+ VV WN+M+ GY + G EA F M + I
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 180 -----SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 234
S+ L A + ++ R+ D ++ L S
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES----------------------- 133
Query: 235 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
DV ++ Y + D+ A+ +FD+ +DV TW MVSG QNG A F
Sbjct: 134 ----DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 295 DQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN-VSSWNT-MITGYGQNGD 348
M + +S ++ + K D+ R L + + + ++++ +I Y D
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCAD 249
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 408
+ A +F+ + ++D SW +++ YA G +EE L +F ++ +N+ + AL
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 468
A + L G IH V+ G V +L+ MY KCG + A +F IE++DVVSW
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSW 369
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE-YFYSMN 527
+ MIA Y + G +A+ +F M I +KP+ +T+ VL C+ G + Y++
Sbjct: 370 SAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIK 429
Query: 528 KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELG 587
D + + T +I + + GR A +P + A ++ AL G T++G
Sbjct: 430 AD--IESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL-----AQGYTQIG 481
Query: 588 E--KAAEMVFKMEPH 600
+ KA ++ M+ H
Sbjct: 482 DANKAFDVYKNMKLH 496
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 251 bits (641), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/608 (27%), Positives = 290/608 (47%), Gaps = 45/608 (7%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
+N+ + + HC S+ F+++ V++ + + + ++ +P
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP---- 151
Query: 117 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 176
WNV++ Y+RN+R ++ ++ M K + A E Y K
Sbjct: 152 --WNVLIGSYIRNKRFQESVSVYKRMMSKGI-----------------RADEFTYPSVIK 192
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 236
+ V +G IE S L N L+ + + + AR+LFD+M
Sbjct: 193 ACAALLDFAYGRVVHGSIEV------SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEART 292
RD VSWN +I+ Y + + +A L D+ + TW + G ++ G A
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 293 FFDQMPQKN-EISYNAMVAGYVQSNKMDMAR--ELFEAMPSRNVS-------SWNTMITG 342
M N I AM+ G + + + ++F + R+ S N++IT
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y + D+ A +F + +W +IISG+A EE + E+ G N T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGYETGCFV-GNALLGMYFKCGSIGEANDVFEGIE 461
+ L A + L+ GK+ H +++ C + N+L+ MY K G I A VF+ +
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
++D V++ ++I GY R G G+ AL F+ M G+KPD +TMV VLSACSH+ L+ G
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHW 546
Query: 522 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 581
F M + + +HY+CM+DL RAG L++A+D+ +P+EP +A LL A IH
Sbjct: 547 LFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 582 GNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
GNT +GE AA+ ++ + +P + G Y+LL+++YA +G W+ +++ + D+GVQK ++
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFA 666
Query: 641 WVEVQNKI 648
+E +++
Sbjct: 667 LMETDSEL 674
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 204/486 (41%), Gaps = 89/486 (18%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSY---------------------- 88
L WN +I +++RN ++ V+ M R +Y
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 89 -------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 135
NA+IS Y R + +AR LFD+M +RD VSWN ++ Y +LG+A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 136 RRLFDSM----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAA 187
+L D M + +V+WN + G + G A M + N +++ L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 188 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMI 247
H G ++ W + ++CL ++ + D +VR N++I
Sbjct: 330 CSHIGALK-----------WGKV-FHCL--------VIRSCSFSHDIDNVR-----NSLI 364
Query: 248 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEI 303
+ Y++ D+ A +F Q + TW +++SG+ N +E +M N I
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDM 358
+ +++ + + + +E + R + WN+++ Y ++G+I A+++FD
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
M +RD V++ ++I GY + G E AL F ++ R G + T LS C+ L
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS---NLV 541
Query: 419 KQIHGQVVKTGYETGCFVG----NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIA 473
++ H K + G + + ++ +Y + G + +A D+F I E T++
Sbjct: 542 REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLK 601
Query: 474 GYARHG 479
HG
Sbjct: 602 ACLIHG 607
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 23/308 (7%)
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCA--LSTCADIAALELGKQIHGQVVKTGYETGCF 435
G EA F ++ S +S A LSTC G+Q+H + +G E
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 436 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
+ L+ Y + EA + E E + WN +I Y R+ ++++ V++ M + G
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH---YTC--MIDLLGRAG 550
++ DE T V+ AC A L+D + Y S+ SS Y C +I + R G
Sbjct: 180 IRADEFTYPSVIKAC--AALLD----FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 551 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 610
+++ A+ L M E A SW A++ +LGE A +++ +M ++ N
Sbjct: 234 KVDVARRLFDRMS-ERDAVSWNAIINCYT--SEEKLGE-AFKLLDRMYLSGVEASIVTWN 289
Query: 611 LYAA----SGRWADAGNMRSRMRDVGVQ--KVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 664
A +G + A N MR+ V+ V + ++ + I G FH R
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 665 YAFLEELD 672
+F ++D
Sbjct: 350 CSFSHDID 357
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
L+ WN ++ + ++G +A RVF++M +R V+Y ++I GY R + +A F M +
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 114 R----DLVSWNVMLTGYVRNRRLGDARRLFDSMP-----QKDVVSWNAMLSGYAQNGYAD 164
D V+ +L+ + + + LF M + + ++ M+ Y + GY D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 165 EAREVFYQMPHK--NAISWNGLLAAYVH 190
+AR++F+ +P++ +A+ L A +H
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIH 606
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 251 bits (641), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/608 (27%), Positives = 290/608 (47%), Gaps = 45/608 (7%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
+N+ + + HC S+ F+++ V++ + + + ++ +P
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP---- 151
Query: 117 VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK 176
WNV++ Y+RN+R ++ ++ M K + A E Y K
Sbjct: 152 --WNVLIGSYIRNKRFQESVSVYKRMMSKGI-----------------RADEFTYPSVIK 192
Query: 177 NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 236
+ V +G IE S L N L+ + + + AR+LFD+M
Sbjct: 193 ACAALLDFAYGRVVHGSIEV------SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEART 292
RD VSWN +I+ Y + + +A L D+ + TW + G ++ G A
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 293 FFDQMPQKN-EISYNAMVAGYVQSNKMDMAR--ELFEAMPSRNVS-------SWNTMITG 342
M N I AM+ G + + + ++F + R+ S N++IT
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y + D+ A +F + +W +IISG+A EE + E+ G N T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGYETGCFV-GNALLGMYFKCGSIGEANDVFEGIE 461
+ L A + L+ GK+ H +++ C + N+L+ MY K G I A VF+ +
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
++D V++ ++I GY R G G+ AL F+ M G+KPD +TMV VLSACSH+ L+ G
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHW 546
Query: 522 YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIH 581
F M + + +HY+CM+DL RAG L++A+D+ +P+EP +A LL A IH
Sbjct: 547 LFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 582 GNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
GNT +GE AA+ ++ + +P + G Y+LL+++YA +G W+ +++ + D+GVQK ++
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFA 666
Query: 641 WVEVQNKI 648
+E +++
Sbjct: 667 LMETDSEL 674
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 204/486 (41%), Gaps = 89/486 (18%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTM----PRRSSVSY---------------------- 88
L WN +I +++RN ++ V+ M R +Y
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 89 -------------NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDA 135
NA+IS Y R + +AR LFD+M +RD VSWN ++ Y +LG+A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 136 RRLFDSM----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAA 187
+L D M + +V+WN + G + G A M + N +++ L A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 188 YVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMI 247
H G ++ W + ++CL ++ + D +VR N++I
Sbjct: 330 CSHIGALK-----------WGKV-FHCL--------VIRSCSFSHDIDNVR-----NSLI 364
Query: 248 SGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEI 303
+ Y++ D+ A +F Q + TW +++SG+ N +E +M N I
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPSRN-----VSSWNTMITGYGQNGDIAQARKLFDM 358
+ +++ + + + +E + R + WN+++ Y ++G+I A+++FD
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
M +RD V++ ++I GY + G E AL F ++ R G + T LS C+ L
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS---NLV 541
Query: 419 KQIHGQVVKTGYETGCFVG----NALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTMIA 473
++ H K + G + + ++ +Y + G + +A D+F I E T++
Sbjct: 542 REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLK 601
Query: 474 GYARHG 479
HG
Sbjct: 602 ACLIHG 607
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 23/308 (7%)
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCA--LSTCADIAALELGKQIHGQVVKTGYETGCF 435
G EA F ++ S +S A LSTC G+Q+H + +G E
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 436 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
+ L+ Y + EA + E E + WN +I Y R+ ++++ V++ M + G
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH---YTC--MIDLLGRAG 550
++ DE T V+ AC A L+D + Y S+ SS Y C +I + R G
Sbjct: 180 IRADEFTYPSVIKAC--AALLD----FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 551 RLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSN 610
+++ A+ L M E A SW A++ +LGE A +++ +M ++ N
Sbjct: 234 KVDVARRLFDRMS-ERDAVSWNAIINCYT--SEEKLGE-AFKLLDRMYLSGVEASIVTWN 289
Query: 611 LYAA----SGRWADAGNMRSRMRDVGVQ--KVTGYSWVEVQNKIHKFTVGDCFHPEKDRI 664
A +G + A N MR+ V+ V + ++ + I G FH R
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 665 YAFLEELD 672
+F ++D
Sbjct: 350 CSFSHDID 357
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
L+ WN ++ + ++G +A RVF++M +R V+Y ++I GY R + +A F M +
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 114 R----DLVSWNVMLTGYVRNRRLGDARRLFDSMP-----QKDVVSWNAMLSGYAQNGYAD 164
D V+ +L+ + + + LF M + + ++ M+ Y + GY D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 165 EAREVFYQMPHK--NAISWNGLLAAYVH 190
+AR++F+ +P++ +A+ L A +H
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIH 606
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 250 bits (639), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 196/365 (53%), Gaps = 15/365 (4%)
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 468
C + L+ K +HG++ + + LL MY CG EA VFE + EK++ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
+I +A++GFG+ A+ +F K G PD G+ AC G +D G +F SM++
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
DY + PS + Y ++++ G L+EA + + MP EP W L+ SR+HGN ELG+
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 589 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV--EVQN 646
AE+V ++P + + G + + DV + + S + V++
Sbjct: 444 YCAEVVEFLDP-------------TRLNKQSREGFIPVKASDVEKESLKKRSGILHGVKS 490
Query: 647 KIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 706
+ +F GD PE D ++ L L + M GYV+ T++ LHD+++E KE +L HSE+
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSER 550
Query: 707 LAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICS 766
+A A +L +P VIKNLRVC DCHNA+K +S IVGR +I RD RFH G C+
Sbjct: 551 IAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACT 610
Query: 767 CGDYW 771
C DYW
Sbjct: 611 CKDYW 615
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 195/337 (57%), Gaps = 6/337 (1%)
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y ++ + ARK+FD +PQ D V W +++GY + G E L +F E+ G + +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
+ AL+ CA + AL GK IH V K + E+ FVG AL+ MY KCG I A +VF+ +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGT 520
++V SW +I GYA +G+ K+A+ E + + G+KPD + ++GVL+AC+H G ++ G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 580
+M Y +TP +HY+C++DL+ RAGRL++A +L+ MP +P A+ WGALL R
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 581 HGNTELGEKAAEMVFKMEPHN----SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
H N ELGE A + + +E N V LSN+Y + R +A +R + GV+K
Sbjct: 402 HKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKT 461
Query: 637 TGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDL 673
G+S +EV + KF GD HP +I+ + L +
Sbjct: 462 PGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSV 498
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 32/326 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR-------SSVSYNAMISGYLRNARF 101
++ P+ ++ +I R+ LR F M + S ++++ +I L+ F
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFF 132
Query: 102 SLARDLFDKMPQRDL-VSWNVMLTG----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSG 156
S+ + + + + + +S + + TG YV ++ L DAR++FD +PQ DVV W+ +++G
Sbjct: 133 SVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNG 192
Query: 157 YAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEA--CRLFDSKSDW--- 207
Y + G E EVF +M K + S L A G + + F K W
Sbjct: 193 YVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIES 252
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
++ L+ + K + A ++F K+ R+V SW +I GYA G +A ++
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 268 HQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNK 317
+ D +++ G L+E R+ + M + EI+ Y+ +V ++ +
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 318 MDMARELFEAMPSRNVSS-WNTMITG 342
+D A L E MP + ++S W ++ G
Sbjct: 373 LDDALNLIEKMPMKPLASVWGALLNG 398
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 17/312 (5%)
Query: 331 RNVSSWNTMITGY----GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
RN + + ++T + N A +FD + + + +I +++ L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 387 FI-EIKRDGESLNRS--TFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLG 442
F+ +K + E + S TF + C +GKQIH VVK G + + V +L
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+Y + + +A VF+ I + DVV W+ ++ GY R G G + L VF M G++PDE +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY-TCMIDLLGRAGRLEEAQDLMRN 561
+ L+AC+ G + +G ++ + K S S T ++D+ + G +E A ++ +
Sbjct: 221 VTTALTACAQVGALAQG-KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 562 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYA-ASGRWAD 620
+ SW AL+G +G + E + + + VLL L A A G + +
Sbjct: 280 LT-RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 621 AG-----NMRSR 627
G NM +R
Sbjct: 339 EGRSMLENMEAR 350
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTW 274
+V+ K+L ARK+FD++ DVV W+ +++GY + G S+ +F + D F+
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYN-----AMVAGYVQSNKMDMARELFEAMP 329
T ++ Q G L + + + + +K+ I + A+V Y + ++ A E+F+ +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-----DCVSWAAIISGYAQTGHYEEAL 384
RNV SW +I GY G +A + + + D V +++ A G EE
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 385 NMF 387
+M
Sbjct: 342 SML 344
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 115/242 (47%), Gaps = 26/242 (10%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSL 103
++ PD++KW+ +++ ++R G L VF M + S ++ + +
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQ 236
Query: 104 ARDLFDKMPQRDLVSWNV-----MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+ + + + ++ + +V ++ Y + + A +F + +++V SW A++ GYA
Sbjct: 237 GKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 296
Query: 159 QNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACRLFDS-KSDWELIS- 211
GYA +A ++ ++ I + G+LAA H G +EE + ++ ++ +E+
Sbjct: 297 AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPK 356
Query: 212 ---WNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISGY-----AQDGDMSQAKNL 262
++C++ + L A L +KM ++ + S W +++G + G+++ KNL
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELA-VKNL 415
Query: 263 FD 264
D
Sbjct: 416 LD 417
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 249 bits (635), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 199/385 (51%), Gaps = 9/385 (2%)
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMAR 322
P F + +NG L +T Q + + + N ++ Y +D A
Sbjct: 113 PDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSAL 172
Query: 323 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
+LF+ P R+V ++N +I G + +I +AR+LFD MP RD VSW ++ISGYAQ H E
Sbjct: 173 QLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE 232
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
A+ +F E+ G + LS CA + GK IH + F+ L+
Sbjct: 233 AIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVD 292
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
Y KCG I A ++FE +K + +WN MI G A HG G+ + F M + G+KPD +T
Sbjct: 293 FYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVT 352
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ VL CSH+GL+D F M Y V KHY CM DLLGRAG +EEA +++ M
Sbjct: 353 FISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQM 412
Query: 563 PFE----PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRW 618
P + +W LLG RIHGN E+ EKAA V + P + G+Y ++ +YA + RW
Sbjct: 413 PKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERW 472
Query: 619 ADAGNMRSRM-RDVGVQKVTGYSWV 642
+ +R + RD V+K G+S V
Sbjct: 473 EEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 166/348 (47%), Gaps = 29/348 (8%)
Query: 87 SYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD 146
+ N +I Y A A LFD+ PQRD+V++NV++ G V+ R + AR LFDSMP +D
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 147 VVSWNAMLSGYAQNGYADEAREVFYQM------PHKNAISWNGLLAAYVHNGRIEEACRL 200
+VSWN+++SGYAQ + EA ++F +M P AI L+A +G ++ +
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV--STLSACAQSGDWQKGKAI 271
Query: 201 FDSKSDWELISWNCLMGGFV----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD- 255
D L + L G V K + A ++F+ + + +WN MI+G A G+
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 256 ---MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNA 307
+ + + D T+ +++ G +G++DEAR FDQM +++ Y
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGC 391
Query: 308 MVAGYVQSNKMDMARELFEAMPS-----RNVSSWNTMITGYGQNGDIAQARKLFD---MM 359
M ++ ++ A E+ E MP + +W+ ++ G +G+I A K + +
Sbjct: 392 MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKAL 451
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
D + ++ YA +EE + + I RD + FS LS
Sbjct: 452 SPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVLS 499
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 219/404 (54%), Gaps = 18/404 (4%)
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQ---------MPQKNEISYNAMVAGYVQSNKMDM 320
D +T+ +++S + +D + Q +P +N + + Y +D+
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHM-----YTCCGALDL 171
Query: 321 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 380
A++LF +P R++ SWN++I G +NGD+ A KLFD MP ++ +SW +IS Y +
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP 231
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
++++F E+ R G N ST L+ C A L+ G+ +H +++T + + AL
Sbjct: 232 GVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTAL 291
Query: 441 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 500
+ MY KC +G A +F+ + ++ V+WN MI + HG + L +FE+M ++PDE
Sbjct: 292 IDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDE 351
Query: 501 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 560
+T VGVL C+ AGL+ +G Y+ M ++ + P+ H CM +L AG EEA++ ++
Sbjct: 352 VTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALK 411
Query: 561 NMPFE---PPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGR 617
N+P E P + W LL +SR GN LGE A+ + + +P N Y LL N+Y+ +GR
Sbjct: 412 NLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGR 471
Query: 618 WADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEK 661
W D +R +++ + ++ G V+++ +H +G C EK
Sbjct: 472 WEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG-CKEAEK 514
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 24/319 (7%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N+++ Y LA+ LF ++P+RD+VSWN ++ G VRN + A +LFD MP K+++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEA----CRL 200
SWN M+S Y + +F +M N + LL A + R++E L
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 201 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAK 260
+ + ++ L+ + K K +G AR++FD + +R+ V+WN MI + G
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 261 NLFDQSPH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYN-----AMVAG 311
LF+ + D T+ ++ G + G++ + ++++ M + +I N M
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL 396
Query: 312 YVQSNKMDMARELFEAMPSRNV----SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 367
Y + + A E + +P +V + W +++ G+ + + + D +++
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Query: 368 A---AIISGYAQTGHYEEA 383
+++ Y+ TG +E+
Sbjct: 457 KYYHLLMNIYSVTGRWEDV 475
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 334 SSWNT-MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 392
SSW ++ + GD + ++ + + C + + Y + ++AL + +I R
Sbjct: 54 SSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCAN--PVFKAYLVSSSPKQALGFYFDILR 111
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
G + TF +S ++ GK HGQ +K G + V N+L+ MY CG++
Sbjct: 112 FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDL 171
Query: 453 ANDVFEGIEEKDVVSWNTMIAGYARHG---------------------------FGKQ-- 483
A +F I ++D+VSWN++IAG R+G G
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP 231
Query: 484 --ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 541
++ +F M G + +E T+V +L+AC + + G S+ + + + S T
Sbjct: 232 GVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF-LNSSVVIDTA 290
Query: 542 MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
+ID+ G+ + A+ + ++ +W ++ A +HG E G + E
Sbjct: 291 LIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLHGRPEGGLELFE 340
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 148/331 (44%), Gaps = 28/331 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLV 117
N ++ + G D A ++F +P+R VS+N++I+G +RN A LFD+MP ++++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQM 173
SWN+M++ Y+ G + LF M Q + + +L+ ++ E R V +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 174 P----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAAR 229
+ + + L+ Y + A R+FDS S ++WN ++
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 230 KLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVF--TWTAMVS 279
+LF+ M +R D V++ ++ G A+ G +SQ ++ + D+ + F W M +
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW-CMAN 395
Query: 280 GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKM--------DMARELFEAMPSR 331
Y G +EA +P ++ + A + S++ +A+ L E P
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP-L 454
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQR 362
N ++ ++ Y G ++ +M+ +R
Sbjct: 455 NYKYYHLLMNIYSVTGRWEDVNRVREMVKER 485
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 260/529 (49%), Gaps = 40/529 (7%)
Query: 126 YVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLL 185
Y N L AR+LFD P++ V WN+++ YA+ +F Q+
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRS--------- 100
Query: 186 AAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVV 241
D++ D ++ CL GF + R + V D +
Sbjct: 101 ----------------DTRPDN--FTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP--- 298
+ ++ Y++ G + +A LF P D+ W M+ GY G D+ F+ M
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 299 -QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWN----TMITGYGQNGDIAQAR 353
Q N + A+ +G + + + +A + N+ S + ++ Y + IA A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
+F+ + + D V+ +++I+GY++ G+++EAL++F E++ G+ + + L +CA+++
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
GK++H V++ G E V +AL+ MY KCG + A +F GI EK++VS+N++I
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
G HGF A F + +G+ PDEIT +L C H+GL+++G E F M ++ +
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM 593
P ++HY M+ L+G AG+LEEA + + ++ + GALL +H NT L E AE
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAEN 502
Query: 594 VFKMEPHNSGMY-VLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 641
+ K +Y V+LSN+YA GRW + +R + + K+ G SW
Sbjct: 503 IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 166/383 (43%), Gaps = 63/383 (16%)
Query: 72 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL--------------- 116
SA ++F+ P RS +N++I Y + +F+ LF ++ + D
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 117 ------------------------VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNA 152
+ + ++ Y + + +A +LF S+P D+ WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 153 MLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRL-------FDSKS 205
M+ GY G+ D+ +F M H+ N + +G I+ + L F K
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGH-QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKI 236
Query: 206 DWELISW-NCLMGGFVKRKM-LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF 263
+ + S+ C + R M + +A +F+ + D+V+ +++I+GY++ G+ +A +LF
Sbjct: 237 NLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLF 296
Query: 264 DQ---SPHQDVFTWTAMVSGYVQNGMLD-----EARTFFDQMPQKNEISY-NAMVAGYVQ 314
+ S + A+V G + D E ++ ++ + +I +A++ Y +
Sbjct: 297 AELRMSGKKPDCVLVAIVLGSCAE-LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSK 355
Query: 315 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAI 370
+ A LF +P +N+ S+N++I G G +G + A ++ +M D ++++A+
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSAL 415
Query: 371 ISGYAQTGHYEEALNMFIEIKRD 393
+ +G + +F +K +
Sbjct: 416 LCTCCHSGLLNKGQEIFERMKSE 438
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 57/319 (17%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNA--RFSLAR 105
+ DPDL WN +I + G D + +FN M R G+ N +L
Sbjct: 166 SIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHR----------GHQPNCYTMVALTS 215
Query: 106 DLFDKMPQRDLVSWNV------------------MLTGYVRNRRLGDARRLFDSMPQKDV 147
L D P LV+W+V ++ Y R + A +F+S+ + D+
Sbjct: 216 GLID--PSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDL 273
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW 207
V+ +++++GY++ G EA +F ++ + + +L A V E L DS S
Sbjct: 274 VACSSLITGYSRCGNHKEALHLFAEL-RMSGKKPDCVLVAIVLGSCAE----LSDSVSGK 328
Query: 208 ELISW-------------NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG 254
E+ S+ + L+ + K +L A LF + +++VS+N++I G G
Sbjct: 329 EVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHG 388
Query: 255 DMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVA 310
S A F + D T++A++ +G+L++ + F++M K+E
Sbjct: 389 FASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERM--KSEFGIEPQTE 446
Query: 311 GYVQSNK-MDMARELFEAM 328
YV K M MA +L EA
Sbjct: 447 HYVYMVKLMGMAGKLEEAF 465
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 163/401 (40%), Gaps = 32/401 (7%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----Q 144
+A++ Y + A LF +P DL WNVM+ GY LF+ M Q
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 145 KDVVSWNAMLSGYAQNGYADEAREV--FYQMPHKNAISWNG--LLAAYVHNGRIEEACRL 200
+ + A+ SG A V F + ++ S+ G L+ Y I AC +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 201 FDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDM 256
F+S S+ +L++ + L+ G+ + A LF ++ + D V ++ A+ D
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 257 SQAKN----LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGY 312
K + D+ +A++ Y + G+L A + F +P+KN +S+N+++ G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 313 ----VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMM-------PQ 361
S + E+ E + +++ ++ +G + + +++F+ M PQ
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 362 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
+ + + G A G EEA + +++ ++ LS C L + +
Sbjct: 445 TEHYVYMVKLMGMA--GKLEEAFEFVMSLQK---PIDSGILGALLSCCEVHENTHLAEVV 499
Query: 422 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
+ K G E L +Y + G E + +GI E
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 247 bits (630), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 211/416 (50%), Gaps = 17/416 (4%)
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
++S +S YA G+ QA NLF Q A V R
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 300 KNEISYNAMVAGYVQSNKMDM---------ARELFEAMPSRNVSSWNTMITGYGQNGDIA 350
+ + N + +V +DM AR+LF+ +P RN WN MI+ Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 351 QARKLF---DMMPQRDCVSWAAIISGYAQT--GHYEEALNMFIEIKRDGESLNRSTFSCA 405
+A +L+ D+MP S+ AII G T G Y A+ + ++ N T
Sbjct: 132 EAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLAL 188
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
+S C+ I A L K+IH + E + + L+ Y +CGSI VF+ +E++DV
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 525
V+W+++I+ YA HG + AL F+ M+ V PD+I + VL ACSHAGL D YF
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 526 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
M DY + S HY+C++D+L R GR EEA +++ MP +P A +WGALLGA R +G E
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Query: 586 LGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 641
L E AA + +EP N YVLL +Y + GR +A +R +M++ GV+ G SW
Sbjct: 369 LAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 171/417 (41%), Gaps = 69/417 (16%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
L+ K +S++ G+ + AL +F M ++ +A + + + R +
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 114 RDLVSWN---------VMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYAD 164
V N +L Y + + AR+LFD +PQ++ V WNAM+S Y G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 165 EAREVFYQMP-HKNAISWNGLLAAYV--HNGR---IEEACRLFDSKSDWELISWNCL--- 215
EA E++ M N S+N ++ V +G IE ++ + + LI+ L
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 216 ---MGGF--VKRKMLGAARKL---------------------------FDKMHVRDVVSW 243
+G F +K A R L FD M RDVV+W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 244 NTMISGYAQDGDMSQAKNLFDQ------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
+++IS YA GD A F + +P D + ++ G+ DEA +F +M
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTP--DDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 298 P-----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS-SWNTMITGYGQNGDI-- 349
+ ++ Y+ +V + + + A ++ +AMP + + +W ++ G+I
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 350 --AQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
AR+L + P+ ++ + Y G EEA + +++K G ++ + C
Sbjct: 370 AEIAARELLMVEPENP-ANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWC 425
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 38/276 (13%)
Query: 152 AMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW-ELI 210
A+L Y + AR++F ++P +NA+ WN +++ Y H G+++EA L+++
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 211 SWNCLMGGFV-----KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ 265
S+N ++ G V + + RK+ + ++++ ++S + G K +
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEI--- 204
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELF 325
H F R + PQ + +V Y + + + +F
Sbjct: 205 --HSYAF------------------RNLIEPHPQLK----SGLVEAYGRCGSIVYVQLVF 240
Query: 326 EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYE 381
++M R+V +W+++I+ Y +GD A K F M D +++ ++ + G +
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD 300
Query: 382 EALNMFIEIKRD-GESLNRSTFSCALSTCADIAALE 416
EAL F ++ D G ++ +SC + + + E
Sbjct: 301 EALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFE 336
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 247 bits (630), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 232/448 (51%), Gaps = 14/448 (3%)
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
++S +S + D++ A+ L S TW + GY + E+ + +M +
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 300 K----NEISYNAMVAGYVQSNKMDMAR----ELFEAMPSRNVSSWNTMITGYGQNGDIAQ 351
+ N++++ ++ + R E+ + +V N +I YG +
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSD 166
Query: 352 ARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
ARK+FD M +R+ VSW +I++ + G F E+ + +T LS C
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG- 225
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTM 471
L LGK +H QV+ E C +G AL+ MY K G + A VFE + +K+V +W+ M
Sbjct: 226 -GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAM 284
Query: 472 IAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDY 530
I G A++GF ++AL +F M K V+P+ +T +GVL ACSH GL+D G +YF+ M K +
Sbjct: 285 IVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIH 344
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE---LG 587
+ P HY M+D+LGRAGRL EA D ++ MPFEP A W LL A IH + + +G
Sbjct: 345 KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIG 404
Query: 588 EKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNK 647
EK + + ++EP SG V+++N +A + WA+A +R M++ ++K+ G S +E+
Sbjct: 405 EKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGS 464
Query: 648 IHKFTVGDCFHPEKDRIYAFLEELDLKM 675
H+F G E IY L+ ++
Sbjct: 465 FHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 30/275 (10%)
Query: 115 DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP 174
D+ N ++ Y ++ DAR++FD M +++VVSWN++++ +NG + E F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 175 HK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG-----FVKRKML 225
K + + LL+A N + +L S+ + NC +G + K L
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLG---KLVHSQVMVRELELNCRLGTALVDMYAKSGGL 263
Query: 226 GAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVSG 280
AR +F++M ++V +W+ MI G AQ G +A LF + S + T+ ++
Sbjct: 264 EYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 281 YVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMP-SRNVS 334
G++D+ +F +M + ++I Y AMV ++ +++ A + + MP +
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 335 SWNTMITGYGQNGD-----IAQ--ARKLFDMMPQR 362
W T+++ + D I + ++L ++ P+R
Sbjct: 384 VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR 418
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 143/323 (44%), Gaps = 48/323 (14%)
Query: 91 MISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSW 150
+IS +R + SLA+DL + R L + DS P +W
Sbjct: 47 IISELVRVSSLSLAKDL-----------------AFARTLLLHSS----DSTPS----TW 81
Query: 151 NAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAY-----VHNGRIEEACRLF 201
N + GY+ + E+ V+ +M + N +++ LL A + GR + +
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGR-QIQVEVL 140
Query: 202 DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKN 261
D+++ N L+ + K ARK+FD+M R+VVSWN++++ ++G ++
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 262 LFDQSPHQ----DVFTWTAMVS---GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQ 314
F + + D T ++S G + G L ++ ++ + A+V Y +
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLG-TALVDMYAK 259
Query: 315 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC-----VSWAA 369
S ++ AR +FE M +NV +W+ MI G Q G +A +LF M + V++
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 370 IISGYAQTGHYEEALNMFIEIKR 392
++ + TG ++ F E+++
Sbjct: 320 VLCACSHTGLVDDGYKYFHEMEK 342
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 48/247 (19%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDK 110
D D+ N +I + A +VF+ M R+ VS+N++++ + N + +L + F +
Sbjct: 145 DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCE 204
Query: 111 MPQR-----------------------DLVSWNVMLTGYVRNRRLGD------------- 134
M + LV VM+ N RLG
Sbjct: 205 MIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 135 -ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK-----NAISWNGLLAAY 188
AR +F+ M K+V +W+AM+ G AQ G+A+EA ++F +M + N +++ G+L A
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 189 VHNGRIEEACRLFDS-----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVS 242
H G +++ + F K +I + ++ + L A KM D V
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 243 WNTMISG 249
W T++S
Sbjct: 385 WRTLLSA 391
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 194/337 (57%), Gaps = 6/337 (1%)
Query: 343 YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
Y ++ + ARK+FD +PQ D V W +++GY + G E L +F E+ G + +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
+ AL+ CA + AL GK IH V K + E+ FVG AL+ MY KCG I A +VFE +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 462 EKDVVSWNTMIAGYARHGFGKQALMVFESM-KTIGVKPDEITMVGVLSACSHAGLIDRGT 520
++V SW +I GYA +G+ K+A + + + G+KPD + ++GVL+AC+H G ++ G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRI 580
+M Y +TP +HY+C++DL+ RAGRL++A DL+ MP +P A+ WGALL R
Sbjct: 342 TMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRT 401
Query: 581 HGNTELGEKAAEMVFKMEPHN----SGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
H N ELGE A + + +E N V LSN+Y + R +A +R + G++K
Sbjct: 402 HKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKT 461
Query: 637 TGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDL 673
G+S +EV + KF GD HP +I+ + L +
Sbjct: 462 PGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSV 498
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 148/326 (45%), Gaps = 32/326 (9%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR-------SSVSYNAMISGYLRNARF 101
++ P+ ++ +I R+ LR F M + S ++++ +I L+ F
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFF 132
Query: 102 SLARDLFDKMPQRDL-VSWNVMLTG----YVRNRRLGDARRLFDSMPQKDVVSWNAMLSG 156
S+ + + + + + +S + TG YV ++ L DAR++FD +PQ DVV W+ +++G
Sbjct: 133 SVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNG 192
Query: 157 YAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEA--CRLFDSKSDW--- 207
Y + G E EVF +M + S L A G + + F K W
Sbjct: 193 YVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIES 252
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
++ L+ + K + A ++F+K+ R+V SW +I GYA G +A D+
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 268 HQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNK 317
+ D +++ G L+E RT + M + I+ Y+ +V ++ +
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 318 MDMARELFEAMPSRNVSS-WNTMITG 342
+D A +L E MP + ++S W ++ G
Sbjct: 373 LDDALDLIEKMPMKPLASVWGALLNG 398
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 15/311 (4%)
Query: 331 RNVSSWNTMITGY----GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
RN + + ++T + N A +FD + + + +I +++ L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 387 FI-EIKRDGESLNRS--TFSCALSTCADIAALELGKQIHGQVVKTG-YETGCFVGNALLG 442
F+ +K + E + S TF + C +GKQIH VVK G + + V +L
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+Y + + +A VF+ I + DVV W+ ++ GY R G G + L VF+ M G++PDE +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ L+AC+ G + +G + K + T ++D+ + G +E A ++ +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 563 PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYA-ASGRWADA 621
SW AL+G +G + + + + + VLL L A A G + +
Sbjct: 281 T-RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 622 G-----NMRSR 627
G NM +R
Sbjct: 340 GRTMLENMEAR 350
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTW 274
+V+ K+L ARK+FD++ DVV W+ +++GY + G S+ +F + D F+
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYN-----AMVAGYVQSNKMDMARELFEAMP 329
T ++ Q G L + + + + +K I + A+V Y + ++ A E+FE +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-----DCVSWAAIISGYAQTGHYEEAL 384
RNV SW +I GY G +A D + + D V +++ A G EE
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 385 NMFIEIK-RDGESLNRSTFSC 404
M ++ R G + +SC
Sbjct: 342 TMLENMEARYGITPKHEHYSC 362
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSL 103
++ PD++KW+ +++ ++R G L VF M R S ++ + +
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQ 236
Query: 104 ARDLFDKMPQR-----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+ + + + ++ D+ ++ Y + + A +F+ + +++V SW A++ GYA
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYA 296
Query: 159 QNGYADEAREVFYQMPHKNAISWN-----GLLAAYVHNGRIEEACRLFDSKSDWELIS-- 211
GYA +A ++ ++ I + G+LAA H G +EE + ++ I+
Sbjct: 297 AYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPK 356
Query: 212 ---WNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-WNTMISG 249
++C++ + L A L +KM ++ + S W +++G
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 215/398 (54%), Gaps = 13/398 (3%)
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN-GMLDEARTFFDQMPQK---NEISYNAMV 309
GD+ +++ + DQ P F W ++ Y+++ LD + + + + S ++
Sbjct: 68 GDIFRSR-ILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 310 AGYVQSNKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
VQ + + +EL + IT Y + G+ ARK+FD P+R
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLG 184
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
SW AII G G EA+ MF+++KR G + T ++C + L L Q+H V
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 426 V--KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 483
+ KT ++ + N+L+ MY KCG + A+ +FE + +++VVSW++MI GYA +G +
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLE 304
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
AL F M+ GV+P++IT VGVLSAC H GL++ G YF M ++ + P HY C++
Sbjct: 305 ALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIV 364
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
DLL R G+L+EA+ ++ MP +P WG L+G G+ E+ E A + ++EP N G
Sbjct: 365 DLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDG 424
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSW 641
+YV+L+N+YA G W D +R M+ V K+ YS+
Sbjct: 425 VYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 170/369 (46%), Gaps = 43/369 (11%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARDL 107
P WN ++ +++R+ A++V+ M R + + S +I ++ F+L ++L
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 108 FDKMPQRDLVSWNV----MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
+ V +T Y + +AR++FD P++ + SWNA++ G G A
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 164 DEAREVFYQMPHKN-----------AISWNGL----LAAYVHNGRIEEACRLFDSKSDWE 208
+EA E+F M S GL LA +H ++ + KSD
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT---EEKSD-- 254
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
++ N L+ + K + A +F++M R+VVSW++MI GYA +G+ +A F Q
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE 314
Query: 269 QDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMD 319
V T+ ++S V G+++E +T+F M + E+ Y +V + ++
Sbjct: 315 FGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 320 MARELFEAMPSR-NVSSWNTMITGYGQNGDIAQAR----KLFDMMPQRDCVSWAAIISGY 374
A+++ E MP + NV W ++ G + GD+ A + ++ P D V + + + Y
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV-YVVLANVY 433
Query: 375 AQTGHYEEA 383
A G +++
Sbjct: 434 ALRGMWKDV 442
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 193/342 (56%), Gaps = 5/342 (1%)
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
A+V Y+ M A ++F+ MP RN +WN MITG GD +A + MP R V
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 366 SWAAIISGYAQTGHYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
SW II GYA+ +EA+ +F + D N T L ++ L++ +H
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 425 VVKTGY-ETGCFVGNALLGMYFKCGSIGEANDVFEGIE--EKDVVSWNTMIAGYARHGFG 481
V K G+ V N+L+ Y KCG I A F I K++VSW TMI+ +A HG G
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 482 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG-TEYFYSMNKDYSVTPSSKHYT 540
K+A+ +F+ M+ +G+KP+ +TM+ VL+ACSH GL + E+F +M +Y +TP KHY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 541 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
C++D+L R GRLEEA+ + +P E A W LLGA ++ + EL E+ + ++E
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS 461
Query: 601 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWV 642
+ G YVL+SN++ +GR+ DA R +M GV K+ G+S V
Sbjct: 462 HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 62/369 (16%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
A++ YL A +FD+MP+R+ V+WNVM+TG A + MP + VV
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWE 208
SW ++ GYA+ EA +F +M +AI N + +
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPA---------------- 265
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVR--DVVSWNTMISGYAQDGDMSQAKNLFDQS 266
WN +G KM G+ K D+ N++I YA+ G + A F +
Sbjct: 266 --VWN--LGDL---KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEI 318
Query: 267 PH--QDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDM 320
P+ +++ +WT M+S + +GM EA + F M + N ++ M++ + +
Sbjct: 319 PNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT---MISVLNACSHGGL 375
Query: 321 ARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 380
A E F + +NTM+ Y D+ L DM+ ++ G
Sbjct: 376 AEEEF-------LEFFNTMVNEYKITPDVKHYGCLVDMLRRK---------------GRL 413
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
EEA + +EI + +++ + L C+ EL +++ ++++ G G+ +
Sbjct: 414 EEAEKIALEIPIEEKAV---VWRMLLGACSVYDDAELAERVTRKLMELERSHG---GDYV 467
Query: 441 LGMYFKCGS 449
L CG+
Sbjct: 468 LMSNIFCGT 476
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 108/264 (40%), Gaps = 53/264 (20%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSW 119
++ ++ G+ A +VF+ MP R+ V++N MI+G F A +KMP R +VSW
Sbjct: 164 LVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSW 223
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVS-------------W---------------- 150
++ GY R + +A LF M D + W
Sbjct: 224 TTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVG 283
Query: 151 ------------NAMLSGYAQNGYADEAREVFYQMPH--KNAISWNGLLAAYVHNGRIEE 196
N+++ YA+ G A + F ++P+ KN +SW +++A+ +G +E
Sbjct: 284 KRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKE 343
Query: 197 ACRLFDSKSDWEL---------ISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTM 246
A +F L + C GG + + L + ++ + DV + +
Sbjct: 344 AVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCL 403
Query: 247 ISGYAQDGDMSQAKNLFDQSPHQD 270
+ + G + +A+ + + P ++
Sbjct: 404 VDMLRRKGRLEEAEKIALEIPIEE 427
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 427 KTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA------------- 473
K G+E+ +V AL+GMY G++ +A+ VF+ + E++ V+WN MI
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 474 ------------------GYARHGFGKQALMVFESMKTI-GVKPDEITMVGVLSACSHAG 514
GYAR K+A+++F M +KP+EIT++ +L A + G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF-EPPAASWGA 573
+ + K V + +ID + G ++ A +P SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 574 LLGASRIHGNTELGEKAAEMVFKME 598
++ A IHG +G++A M ME
Sbjct: 331 MISAFAIHG---MGKEAVSMFKDME 352
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 231/411 (56%), Gaps = 13/411 (3%)
Query: 243 WNTMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMP 298
+NT+I Y G+ + LF V T+ +++ + + Q
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 299 QK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARK 354
++ + + V Y + ++ +R++F+ + + V + N+++ G+NG++ A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 355 LFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL---NRSTFSCALSTCA- 410
F MP D VSW +I+G+++ G + +AL +F E+ ++ ++ N +TF LS+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 411 -DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWN 469
D + LGKQIHG V+ +G ALL MY K G + A +F+ I +K V +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 470 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 529
+I+ A +G KQAL +FE MK+ V P+ IT++ +L+AC+ + L+D G + F S+ +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 530 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEK 589
Y + P+S+HY C++DL+GRAG L +A + ++++PFEP A+ GALLGA +IH NTELG
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 590 AAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
+ + ++P + G YV LS A W++A MR M + G++K+ YS
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 225 LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQN 284
L ++RK+FD + VV+ N+++ ++G+M A F + P DV +WT +++G+ +
Sbjct: 137 LESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196
Query: 285 GMLDEARTFFDQMPQK-------NEISYNAMVAGYVQSNK--MDMARELFEAMPSRNVSS 335
G+ +A F +M Q NE ++ ++++ ++ + + +++ + S+ +
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIIL 256
Query: 336 WNTMITG----YGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
T+ T YG+ GD+ A +FD + + +W AIIS A G ++AL MF +K
Sbjct: 257 TTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMK 316
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHG------QVVKTGYETGCFV 436
N T L+ CA ++LG Q+ +++ T GC V
Sbjct: 317 SSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVV 367
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 27/266 (10%)
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
+R +FD + +V+ N +L RN + A F MP DVVSW +++G+++ G
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRK 223
+A VF +M A +V + +C FD I + G+V K
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFV---SVLSSCANFDQGG----IRLGKQIHGYVMSK 252
Query: 224 MLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQ 283
+ + ++ Y + GD+ A +FDQ + V W A++S
Sbjct: 253 EI-----------ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS 301
Query: 284 NGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVS 334
NG +A F+ M N I+ A++ +S +D+ +LF ++ S
Sbjct: 302 NGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSE 361
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMP 360
+ ++ G+ G + A +P
Sbjct: 362 HYGCVVDLIGRAGLLVDAANFIQSLP 387
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 134/330 (40%), Gaps = 50/330 (15%)
Query: 83 RSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 142
++ YN +I YL + + LF M L +V+ L F S+
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHM-----------LASHVQPNNLT-----FPSL 92
Query: 143 PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAA-----YVHNGRIEEA 197
+ S++ G A +G A K W+ + Y G +E +
Sbjct: 93 IKAACSSFSVSY-GVALHGQA-----------LKRGFLWDPFVQTSFVRFYGEVGDLESS 140
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 257
++FD + +++ N L+ + + A + F +M V DVVSW T+I+G+++ G +
Sbjct: 141 RKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 258 QAKNLFDQ---------SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAM 308
+A +F + +P++ F G + + + K I +
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 309 VAG----YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR-- 362
Y ++ ++MA +F+ + + V +WN +I+ NG QA ++F+MM
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYV 320
Query: 363 --DCVSWAAIISGYAQTGHYEEALNMFIEI 390
+ ++ AI++ A++ + + +F I
Sbjct: 321 HPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 49/212 (23%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDL 107
D+ +P ++ N ++ RNG D A F MP VS+ +I+G+ + + A +
Sbjct: 146 DILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMV 205
Query: 108 FDKMPQ--RDLVSWN----------------------VMLTGYVRNRRL----------- 132
F +M Q R +++ N + GYV ++ +
Sbjct: 206 FGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALL 265
Query: 133 ------GD---ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMP----HKNAI 179
GD A +FD + K V +WNA++S A NG +A E+F M H N I
Sbjct: 266 DMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGI 325
Query: 180 SWNGLLAAYVHNGRIEEACRLFDSK-SDWELI 210
+ +L A + ++ +LF S S++++I
Sbjct: 326 TLLAILTACARSKLVDLGIQLFSSICSEYKII 357
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 44/179 (24%)
Query: 68 GHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYV 127
G +S+ ++F+ + V+ N+++ RN A + F +MP D+VSW ++ G+
Sbjct: 135 GDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFS 194
Query: 128 RNRRLGDARRLFDSMPQKD--VVSWN-----AMLSG------------------------ 156
+ A +F M Q + V++ N ++LS
Sbjct: 195 KKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI 254
Query: 157 -------------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD 202
Y + G + A +F Q+ K +WN +++A NGR ++A +F+
Sbjct: 255 ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 224/402 (55%), Gaps = 17/402 (4%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDV--FTWTAMVSGYVQNGMLDEARTFFDQM---- 297
+ ++ YA G A +FD+ +D F W +++SGY + G ++A + QM
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 298 --PQKNEISYNAMVAGYVQSNKMDMA--RELFEAMPSRNVSSWNTMITGYGQNGDIAQAR 353
P + G + S ++ A R+L + +V N ++ Y + GDI +AR
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
+FDM+P +D VSW ++++GY G EAL++F + ++G ++ S S A +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS---SVLARVL 307
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
+ + G+Q+HG V++ G E V NAL+ +Y K G +G+A +F+ + E+D VSWN +I+
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
++++ G L FE M KPD IT V VLS C++ G+++ G F M+K+Y +
Sbjct: 368 AHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLM-RNMPFEPPAASWGALLGASRIHGNTELGEKAAE 592
P +HY CM++L GRAG +EEA ++ + M E WGALL A +HGNT++GE AA+
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQ 484
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
+F++EP N + LL +Y+ + R D +R M D G++
Sbjct: 485 RLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 154/308 (50%), Gaps = 27/308 (8%)
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC--VSWAAIISGYAQTGHYEEALNMFIE 389
N+ + ++ Y G A ++FD M +RD +W ++ISGYA+ G YE+A+ ++ +
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
+ DG +R TF L C I ++++G+ IH +VK G+ +V NAL+ MY KCG
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 450 IGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA 509
I +A +VF+ I KD VSWN+M+ GY HG +AL +F M G++PD++ + VL+
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 510 C--------SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
H +I RG E+ S+ +I L + G+L +A +
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVA------------NALIVLYSKRGQLGQACFIFDQ 353
Query: 562 MPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM-YVLLSNLYAASGRWAD 620
M E SW A++ A H G K E + + G+ +V + +L A +G D
Sbjct: 354 M-LERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 621 AGNMRSRM 628
+ S M
Sbjct: 410 GERLFSLM 417
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 190/424 (44%), Gaps = 58/424 (13%)
Query: 157 YAQNGYADEAREVFYQMPHKNA--ISWNGLLAAYVHNGRIEEACRLF------DSKSDWE 208
YA GYA+ A EVF +M +++ +WN L++ Y G+ E+A L+ K D
Sbjct: 137 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 196
Query: 209 LISWNCLMGGFVKRKMLGAA--RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
G + +G A R L + DV N ++ YA+ GD+ +A+N+FD
Sbjct: 197 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 256
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM--AREL 324
PH+D +W +M++GY+ +G+L EA F M Q N I + + V + + R+L
Sbjct: 257 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ-NGIEPDKVAISSVLARVLSFKHGRQL 315
Query: 325 FEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 380
+ R +S N +I Y + G + QA +FD M +RD VSW AIIS +++ +
Sbjct: 316 HGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN- 374
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
L F ++ R + TF LS CA+ +E G+++ + K
Sbjct: 375 --GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE------------ 420
Query: 441 LGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL-MVFESMKTIGVKPD 499
GI+ K + + M+ Y R G ++A M+ + M G++
Sbjct: 421 -----------------YGIDPK-MEHYACMVNLYGRAGMMEEAYSMIVQEM---GLEAG 459
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH-YTCMIDLLGRAGRLEEAQDL 558
+L AC G D G + + + + P ++H + +I + +A R E+ + +
Sbjct: 460 PTVWGALLYACYLHGNTDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERV 516
Query: 559 MRNM 562
+ M
Sbjct: 517 RQMM 520
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 71/379 (18%)
Query: 52 PDLLKWN-----KVISTHMRNGHCDSALRVFNTMPRR--SSVSYNAMISGYLRNARFSLA 104
P LL+ N K++ + G+ + A VF+ M +R S ++N++ISGY ++ A
Sbjct: 120 PYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDA 179
Query: 105 RDLFDKM------PQRDLVSWNVMLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSG 156
L+ +M P R + G + + ++G+A R L DV NA++
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVM 239
Query: 157 YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF----------DSKS- 205
YA+ G +AR VF +PHK+ +SWN +L Y+H+G + EA +F D +
Sbjct: 240 YAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 206 -------------------------DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV 240
+WEL N L+ + KR LG A +FD+M RD
Sbjct: 300 SSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDT 359
Query: 241 VSWNTMISGYAQDGD-MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
VSWN +IS ++++ + + + + + D T+ +++S GM+++ F M +
Sbjct: 360 VSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 300 KNEIS-----YNAMVAGYVQSNKMDMAREL------FEAMPSRNVSSWNTMITG--YGQN 346
+ I Y MV Y ++ M+ A + EA P + W ++ N
Sbjct: 420 EYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGP----TVWGALLYACYLHGN 475
Query: 347 GDIAQ--ARKLFDMMPQRD 363
DI + A++LF++ P +
Sbjct: 476 TDIGEVAAQRLFELEPDNE 494
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 402 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE 461
F+ L TC + A++ G ++H + + + L+ +Y CG A++VF+ +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 462 EKDV--VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
++D +WN++I+GYA G + A+ ++ M GVKPD T VL AC G + G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 520 TEYFYSMNKD---YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLG 576
+ K+ Y V ++ + + G + +A+++ +P + SW ++L
Sbjct: 215 EAIHRDLVKEGFGYDVYV----LNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLT 269
Query: 577 ASRIHG 582
HG
Sbjct: 270 GYLHHG 275
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 183/660 (27%), Positives = 306/660 (46%), Gaps = 93/660 (14%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM-- 111
L + N + +M+ G S LR F+ M R SVS+N ++ G L F K+
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 112 ----PQRDLVS---------W----------------------NVMLTGYVRNRRLGDAR 136
P + W N +L Y + L AR
Sbjct: 121 WGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-AR 179
Query: 137 RLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEE 196
+LFD M ++DV+SW+ ++ Y Q+ ++F +M VH + E
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM---------------VHEAKTEP 224
Query: 197 ACRLFDSKSDWELISWNCLMGGFVKRKMLG-AARKLFDKMHVRDVVSWNTMISGYAQDGD 255
C S L + + V R + G + R+ FD + DV N++I Y++ D
Sbjct: 225 DCVTVTSV----LKACTVMEDIDVGRSVHGFSIRRGFD---LADVFVCNSLIDMYSKGFD 277
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS 315
+ A +FD++ +++ +W ++++G+V N DEA F M Q+ V ++
Sbjct: 278 VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV 337
Query: 316 NKMDMARELFE-AMPSRNVS-------------SWNTMITGYGQNGDIAQARKLFDMMPQ 361
K FE +P +++ + +++I Y + A + D M
Sbjct: 338 CK------FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY 391
Query: 362 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
+D VS + +ISG A G +EA+++F ++ ++ N T L+ C+ A L K
Sbjct: 392 KDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWA 448
Query: 422 HGQVVKTGYETG-CFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGF 480
HG ++ VG +++ Y KCG+I A F+ I EK+++SW +I+ YA +G
Sbjct: 449 HGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGL 508
Query: 481 GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM-NKDYSVTPSSKHY 539
+AL +F+ MK G P+ +T + LSAC+H GL+ +G F SM +D+ PS +HY
Sbjct: 509 PDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHY 566
Query: 540 TCMIDLLGRAGRLEEAQDLMRNMP--FEPPAASWGALLGASRIHGNTEL--GEKAAEMVF 595
+C++D+L RAG ++ A +L++N+P + A++WGA+L R + E AE V
Sbjct: 567 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAE-VL 625
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGD 655
++EP S Y+L S+ +AA W D MR +++ V+ V GYS V N +F GD
Sbjct: 626 ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/423 (18%), Positives = 170/423 (40%), Gaps = 97/423 (22%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS-----SVSYNAMISGYLRNARFS 102
++ + D++ W+ VI +++++ L++F M + V+ +++
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 103 LARDLFDKMPQR-----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGY 157
+ R + +R D+ N ++ Y + + A R+FD +++VSWN++L+G+
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303
Query: 158 AQNGYADEAREVFYQM--------------------------PHK-------------NA 178
N DEA E+F+ M P K N
Sbjct: 304 VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNE 363
Query: 179 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH-- 236
++ + L+ AY +++A + DS + +++S + ++ G A +F M
Sbjct: 364 VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT 423
Query: 237 -----------------------------------VRDVVSWNTMISGYAQDGDMSQAKN 261
+ D+ +++ YA+ G + A+
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNK 317
FDQ +++ +WT ++S Y NG+ D+A FD+M QK N ++Y A ++
Sbjct: 484 TFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGL 543
Query: 318 MDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQ---RDCVSWAAI 370
+ +F++M + + ++ ++ + G+I A +L +P+ +W AI
Sbjct: 544 VKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAI 603
Query: 371 ISG 373
+SG
Sbjct: 604 LSG 606
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 377 TGHYEEALNMFIEIKRDGESLNRS-TFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
+G + E ++ + EI+R G N F CA ++ L F
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL-------------------F 62
Query: 436 VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
GN++ Y KCG + F+ + +D VSWN ++ G +GF ++ L F ++ G
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 496 VKPDEITMVGVLSAC 510
+P+ T+V V+ AC
Sbjct: 123 FEPNTSTLVLVIHAC 137
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 196/327 (59%), Gaps = 12/327 (3%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQR-DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
+++ Y GD+ AR++FD P++ + V W A+IS Y + + EA+ +F ++ +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG--CFVGNALLGMYFKCGSIGEA 453
L+ + ALS CAD+ A+++G++I+ + +K + N+LL MY K G +A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 454 NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG------VKPDEITMVGVL 507
+F+ KDV ++ +MI GYA +G +++L +F+ MKTI + P+++T +GVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 567
ACSH+GL++ G +F SM DY++ P H+ CM+DL R+G L++A + + MP +P
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 568 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSR 627
W LLGA +HGN ELGE+ +F+++ + G YV LSN+YA+ G W + MR R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 628 MRDVGVQKVTGYSWVEVQNKIHKFTVG 654
+R +++ G SW+E+ + I++F G
Sbjct: 404 VRK---RRMPGKSWIELGSIINEFVSG 427
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 134/276 (48%), Gaps = 34/276 (12%)
Query: 231 LFDKMHVRDVVSWNTMISG-YAQDGDMSQAKNLFDQSPH-QDVFTWTAMVSGYVQNGMLD 288
L K+ V+ T + G Y+ GD+ A+ +FD++P Q++ WTAM+S Y +N
Sbjct: 90 LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 289 EARTFFDQMPQKNEISYNAMVAGYVQSNKMDM-ARELFEAMPSRNV----------SSWN 337
EA F +M + +I + ++ S D+ A ++ E + SR++ + N
Sbjct: 150 EAIELFKRM-EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRN 208
Query: 338 TMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL 397
+++ Y ++G+ +ARKLFD ++D ++ ++I GYA G +E+L +F ++K +S
Sbjct: 209 SLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQ 268
Query: 398 ------NRSTFSCALSTCADIAALELGKQIHGQVVKTGYET-------GCFVGNALLGMY 444
N TF L C+ +E GK+ H + + Y GC V ++
Sbjct: 269 DTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMV-----DLF 322
Query: 445 FKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHG 479
+ G + +A++ + K + V W T++ + HG
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 172/379 (45%), Gaps = 54/379 (14%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRRSSV---SYNAMISGYLRNARFSLARD----- 106
LK N + ++ +G AL F R+S S++ + + + +A+ + + D
Sbjct: 29 LKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIH 88
Query: 107 -LFDKMPQRDLVSWNVMLTGYVRNRRLGD---ARRLFDSMPQK-DVVSWNAMLSGYAQNG 161
L K+ ++ L G+ + +GD AR++FD P+K ++V W AM+S Y +N
Sbjct: 89 ALVRKLGFNAVIQIQTSLVGFYSS--VGDVDYARQVFDETPEKQNIVLWTAMISAYTENE 146
Query: 162 YADEAREVFYQMPHKNAISWNGL-----LAAYVHNGRIEEACRLFD------SKSDWELI 210
+ EA E+F +M + I +G+ L+A G ++ ++ + +L
Sbjct: 147 NSVEAIELFKRMEAEK-IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF------D 264
N L+ +VK ARKLFD+ +DV ++ +MI GYA +G ++ LF D
Sbjct: 206 LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID 265
Query: 265 QS------PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-----QKNEISYNAMVAGYV 313
QS P+ F M + +G+++E + F M + E + MV +
Sbjct: 266 QSQDTVITPNDVTFIGVLMACSH--SGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 314 QSNKMDMARELFEAMPSR-NVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRDCV-SW 367
+S + A E MP + N W T++ +G++ R++F++ RD V +
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL--DRDHVGDY 381
Query: 368 AAIISGYAQTGHYEEALNM 386
A+ + YA G ++E M
Sbjct: 382 VALSNIYASKGMWDEKSKM 400
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 131/312 (41%), Gaps = 66/312 (21%)
Query: 68 GHCDSALRVFNTMPRRSS-VSYNAMISGYLRNARFSLARDLFDKMPQR------------ 114
G D A +VF+ P + + V + AMIS Y N A +LF +M
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 115 -----------------------------DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK 145
DL N +L YV++ AR+LFD +K
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQMP----------HKNAISWNGLLAAYVHNGRIE 195
DV ++ +M+ GYA NG A E+ E+F +M N +++ G+L A H+G +E
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 196 EACRLFDSK-SDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISG 249
E R F S D+ L + C++ F + L A + ++M ++ + V W T++
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 250 YAQDGDMSQAKNLFDQSPHQD---VFTWTAMVSGYVQNGMLDEARTFFD-----QMPQKN 301
+ G++ + + + D V + A+ + Y GM DE D +MP K+
Sbjct: 354 CSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGKS 413
Query: 302 EISYNAMVAGYV 313
I +++ +V
Sbjct: 414 WIELGSIINEFV 425
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 402 FSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGI 460
F+ +S+ ++L+ G+QIH V K G+ + +L+G Y G + A VF E
Sbjct: 69 FAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 461 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
E++++V W MI+ Y + +A+ +F+ M+ ++ D + + LSAC+ G + G
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 521 E-YFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 558
E Y S+ + + ++++ ++G E+A+ L
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKL 226
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 262/525 (49%), Gaps = 62/525 (11%)
Query: 72 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRR 131
+ L VFN++PR+S + + A R +FD + ++ N M + +
Sbjct: 27 AQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDM 86
Query: 132 LGDARRLFDS------MPQKDVVSWNAMLSGYAQNGYADEA---REVFYQMPHKNAISWN 182
D RL++ MP D S+ ++ + G +A + F++ P+ N
Sbjct: 87 ANDVLRLYEQRSRCGIMP--DAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVR----N 140
Query: 183 GLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS 242
++ YV + +E A ++FD S + WN ++ G+ K A KLFD M DVVS
Sbjct: 141 VIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS 200
Query: 243 WNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----P 298
W MI+G+A+ D+ A+ FD+ P + V +W AM+SGY QNG ++A F+ M
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 299 QKNEISYNAMVAG--------------------------YVQSNKMDM---------ARE 323
+ NE ++ +++ +V++ +DM AR
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 324 LFEAMPS-RNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
+F + + RN+ +WN MI+GY + GD++ AR+LFD MP+R+ VSW ++I+GYA G
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 383 ALNMFIEIKRDGES-LNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
A+ F ++ G+S + T LS C +A LELG I + K + +L+
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
MY + G++ EA VF+ ++E+DVVS+NT+ +A +G G + L + MK G++PD +
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
T VL+AC+ AGL+ G F S+ P + HY CM DLL
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 220/398 (55%), Gaps = 28/398 (7%)
Query: 50 KDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD 109
KDP + N ++ ++++ +SA +VF+ + +R +N MISGY + A LFD
Sbjct: 134 KDPYVR--NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFD 191
Query: 110 KMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREV 169
MP+ D+VSW VM+TG+ + + L +AR+ FD MP+K VVSWNAMLSGYAQNG+ ++A +
Sbjct: 192 MMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRL 251
Query: 170 FYQM----PHKNAISWNGLLAAYVHNGR---IEEACRLFDSKSDWELISWNC-----LMG 217
F M N +W +++A +L D K + NC L+
Sbjct: 252 FNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR----VRLNCFVKTALLD 307
Query: 218 GFVKRKMLGAARKLFDKMHV-RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
K + + +AR++F+++ R++V+WN MISGY + GDMS A+ LFD P ++V +W +
Sbjct: 308 MHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNS 367
Query: 277 MVSGYVQNGMLDEARTFFDQM-----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR 331
+++GY NG A FF+ M + +E++ ++++ +++ + + +
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 332 NV----SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 387
+ S + ++I Y + G++ +A+++FD M +RD VS+ + + +A G E LN+
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQV 425
++K +G +R T++ L+ C L+ G++I +
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 219/473 (46%), Gaps = 56/473 (11%)
Query: 175 HKNAISWNGLLAAYVHNGRIEEACR-----------LFDSKSDWELISWNCLMGGFVKRK 223
H I +N L RI C +FDS + + N + F K
Sbjct: 26 HAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMD 85
Query: 224 MLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQ-SPHQDVFTWTAMV 278
M +L+++ + D S+ +I + G + QA L ++ +D + ++
Sbjct: 86 MANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA--LVEKLGFFKDPYVRNVIM 143
Query: 279 SGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNT 338
YV++ ++ AR FDQ+ Q+ +N M++GY + + A +LF+ MP +V SW
Sbjct: 144 DMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
MITG+ + D+ ARK FD MP++ VSW A++SGYAQ G E+AL +F ++ R G N
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC----------- 447
+T+ +S C+ A L + + + + CFV ALL M+ KC
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 448 ---------------------GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALM 486
G + A +F+ + +++VVSWN++IAGYA +G A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 487 VFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL 545
FE M G KPDE+TM+ VLSAC H ++ G + K+ + + Y +I +
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFM 442
Query: 546 LGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
R G L EA+ + M E S+ L A +G+ G + ++ KM+
Sbjct: 443 YARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGD---GVETLNLLSKMK 491
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 215/405 (53%), Gaps = 23/405 (5%)
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDE---ARTFFDQM-------PQKNEISY 305
+S A ++ Q P+ VF + ++S V N + A + +DQ+ + NE +Y
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 306 NAMV------AGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQN-GDIAQARKLFDM 358
++ A + + + A L P + + G+ N G + +AR LF+
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 359 MPQRDCVSWAAIISGYAQTGHY---EEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
+ + D +W +++ YA + EE L +F+ ++ L + + +CA++
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNEL---SLVALIKSCANLGEF 232
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
G H V+K FVG +L+ +Y KCG + A VF+ + ++DV +N MI G
Sbjct: 233 VRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGL 292
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
A HGFG++ + +++S+ + G+ PD T V +SACSH+GL+D G + F SM Y + P
Sbjct: 293 AVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK 352
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
+HY C++DLLGR+GRLEEA++ ++ MP +P A W + LG+S+ HG+ E GE A + +
Sbjct: 353 VEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLL 412
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
+E NSG YVLLSN+YA RW D R M+D V K G S
Sbjct: 413 GLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 24/258 (9%)
Query: 109 DKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
D+ Q LV + Y +L +AR LF+ + + D+ +WN +L+ YA + D E
Sbjct: 149 DRFVQAALVGF------YANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEE 202
Query: 169 V---FYQMPHK-NAISWNGLLAAYVHNGRIEEA--CRLFDSKSDWELISW--NCLMGGFV 220
V F +M + N +S L+ + + G ++ K++ L + L+ +
Sbjct: 203 VLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYS 262
Query: 221 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDG----DMSQAKNLFDQSPHQDVFTWTA 276
K L ARK+FD+M RDV +N MI G A G + K+L Q D T+
Sbjct: 263 KCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
Query: 277 MVSGYVQNGMLDEARTFFDQMPQKNEIS-----YNAMVAGYVQSNKMDMARELFEAMPSR 331
+S +G++DE F+ M I Y +V +S +++ A E + MP +
Sbjct: 323 TISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK 382
Query: 332 -NVSSWNTMITGYGQNGD 348
N + W + + +GD
Sbjct: 383 PNATLWRSFLGSSQTHGD 400
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 20/231 (8%)
Query: 49 VKDPDLLKWNKVISTHMRNGHCDS---ALRVFNTMP-RRSSVSYNAMIS-----GYLRNA 99
+++PDL WN +++ + + DS L +F M R + +S A+I G
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRG 235
Query: 100 RFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
++ L + + V + ++ Y + L AR++FD M Q+DV +NAM+ G A
Sbjct: 236 VWAHVYVLKNNLTLNQFVGTS-LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAV 294
Query: 160 NGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSKS-----DWELI 210
+G+ E E++ + + + ++ ++A H+G ++E ++F+S + ++
Sbjct: 295 HGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVE 354
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR-DVVSWNTMISGYAQDGDMSQAK 260
+ CL+ + L A + KM V+ + W + + GD + +
Sbjct: 355 HYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGE 405
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 258/512 (50%), Gaps = 56/512 (10%)
Query: 185 LAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DV 240
L A+ I A +F+ S+ L +N ++ G+ A +F+++ + D
Sbjct: 66 LLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDR 125
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWT----AMVSGYVQNGMLDEARTFFDQ 296
S+ T + +++ +S + L + +T A++ Y G + +AR FD+
Sbjct: 126 FSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE 185
Query: 297 MPQK-NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSW--------------- 336
MPQ + ++++ ++ GY+Q +K +A +LF M NVS+
Sbjct: 186 MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSG 245
Query: 337 --------------------NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQ 376
+I YG+ G I+ AR++FD ++D V+W +I YA+
Sbjct: 246 AESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAK 305
Query: 377 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
TG EE + + ++K + N STF LS+CA A +G+ + + + +
Sbjct: 306 TGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAIL 365
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMK--TI 494
G AL+ MY K G + +A ++F +++KDV SW MI+GY HG ++A+ +F M+
Sbjct: 366 GTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENC 425
Query: 495 GVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEE 554
V+P+EIT + VL+ACSH GL+ G F M + YS TP +HY C++DLLGRAG+LEE
Sbjct: 426 KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEE 485
Query: 555 AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAA 614
A +L+RN+P + +W ALL A R++GN +LGE + +M + +LL+ +A
Sbjct: 486 AYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAV 545
Query: 615 SGRWADA-GNMRSRMRDVGVQKVTGYSWVEVQ 645
+G + N ++ R K GYS +E++
Sbjct: 546 AGNPEKSLDNELNKGR-----KEAGYSAIEIE 572
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 179/395 (45%), Gaps = 83/395 (21%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRR-SSVSYNAMISGYLRNARFSLARDLFDKMPQRDL 116
N +I + G A +VF+ MP+ +V+++ +++GYL+ ++ +LA DLF M + ++
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 117 V-SWNVMLTGYVRNRRLGD--------------------------------------ARR 137
V + + +L+ LGD ARR
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 138 LFDSMPQKDVVSWNAMLSGYAQNGYADEA----REVFYQMPHKNAISWNGLLAAYVHNGR 193
+FD +KDVV+WN M+ YA+ G +E R++ Y+ N+ ++ GLL++ ++
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS-- 341
Query: 194 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQD 253
EA FV R + A L ++ D + ++ YA+
Sbjct: 342 --EA--------------------AFVGRTV---ADLLEEERIALDAILGTALVDMYAKV 376
Query: 254 GDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK------NEISY-- 305
G + +A +F++ +DV +WTAM+SGY +G+ EA T F++M ++ NEI++
Sbjct: 377 GLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLV 436
Query: 306 --NAMVAGYVQSNKMDMARELFEAMP-SRNVSSWNTMITGYGQNGDIAQARKLFDMMP-Q 361
NA G + + + + EA + V + ++ G+ G + +A +L +P
Sbjct: 437 VLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPIT 496
Query: 362 RDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGES 396
D +W A+++ G+ + ++ + + GE+
Sbjct: 497 SDSTAWRALLAACRVYGNADLGESVMMRLAEMGET 531
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 45/196 (22%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGY------------LRN 98
D DL +I + + G SA R+F+ R+ V++N MI Y LR
Sbjct: 259 DLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQ 318
Query: 99 ARFS-----------------------LARDLFDKMPQR----DLVSWNVMLTGYVRNRR 131
++ + R + D + + D + ++ Y +
Sbjct: 319 MKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGL 378
Query: 132 LGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA------ISWNGLL 185
L A +F+ M KDV SW AM+SGY +G A EA +F +M +N I++ +L
Sbjct: 379 LEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVL 438
Query: 186 AAYVHNGRIEEACRLF 201
A H G + E R F
Sbjct: 439 NACSHGGLVMEGIRCF 454
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 10/219 (4%)
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
L +C D + +IHG +VKTG + F + LL + I A+ +FE + ++
Sbjct: 35 LRSCRDTVEV---SRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNL 90
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYS 525
+NTMI GY+ ++A VF ++ G+ D + + L +CS + G E +
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIG-EGLHG 149
Query: 526 MNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTE 585
+ + +I G++ +A+ + MP A ++ L+ +G +
Sbjct: 150 IALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLM-----NGYLQ 204
Query: 586 LGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 624
+ +KA + S + V +S L + +D G++
Sbjct: 205 VSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDL 243
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 227/412 (55%), Gaps = 11/412 (2%)
Query: 239 DVVSWNTMISGYAQDGDM-SQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM 297
+VV + ++ Y++ + + ++F P++++F+W ++ + ++G ++ F +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 298 PQKNEISYN----AMVAGYVQSNKMDMARELFEAMP-----SRNVSSWNTMITGYGQNGD 348
+++ + + ++ +++ + +L + S ++ + ++ Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 349 IAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 408
+ ARKLFD MP RD V + A+ GY Q G L MF E+ G +L+ L
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 468
C + AL+ GK +HG ++ G +GNA+ MY KC + A+ VF + +DV+SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
+++I GY G + +F+ M G++P+ +T +GVLSAC+H GL+++ YF M +
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-Q 363
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
+Y++ P KHY + D + RAG LEEA+ + +MP +P A GA+L +++GN E+GE
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 589 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
+ A + +++P + YV L+ LY+A+GR+ +A ++R M++ + KV G S
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 181/453 (39%), Gaps = 96/453 (21%)
Query: 129 NRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAY 188
N + +F MP +++ SWN ++ ++++G+A ++ ++F +M ++ + +
Sbjct: 80 NHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPL 139
Query: 189 VHNGRIEEACRLFDSKSDWELISWNCLMGGF--------------VKRKMLGAARKLFDK 234
I AC +LI CL GF V L ARKLFD
Sbjct: 140 -----ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDD 194
Query: 235 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEA 290
M VRD V + M GY Q G+ +F + + D +++ Q G L
Sbjct: 195 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
Query: 291 RTFFDQMPQKNEI----SYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQN 346
++ ++ NA+ YV+ + +D A +F M R+V SW+++I GYG +
Sbjct: 255 KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD 314
Query: 347 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 406
GD+ + KLFD E+ ++G N TF L
Sbjct: 315 GDVVMSFKLFD-------------------------------EMLKEGIEPNAVTFLGVL 343
Query: 407 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 466
S CA HG +V+ + +YF+ + E N V E +
Sbjct: 344 SACA-----------HGGLVEKSW------------LYFRL--MQEYNIVPE------LK 372
Query: 467 SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSM 526
+ ++ +R G ++A E M VKPDE M VLS C G ++ G +
Sbjct: 373 HYASVADCMSRAGLLEEAEKFLEDMP---VKPDEAVMGAVLSGCKVYGNVEVGERVAREL 429
Query: 527 NKDYSVTP-SSKHYTCMIDLLGRAGRLEEAQDL 558
+ + P + +Y + L AGR +EA+ L
Sbjct: 430 IQ---LKPRKASYYVTLAGLYSAAGRFDEAESL 459
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 171/366 (46%), Gaps = 41/366 (11%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYN----AMISGYLRNARFSLARDLF 108
++ WN +I R+G ++ +F M R S V + +I +R + + DL
Sbjct: 97 NIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLI 156
Query: 109 DKMPQR-----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
+ + L + ++ YV +L AR+LFD MP +D V + AM GY Q G A
Sbjct: 157 HVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEA 216
Query: 164 DEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL---M 216
+F +M + +++ LL A G ++ S W + +CL +
Sbjct: 217 MLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG----KSVHGWCIRRCSCLGLNL 272
Query: 217 GG-----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
G +VK +L A +F M RDV+SW+++I GY DGD+ + LFD+ + +
Sbjct: 273 GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI 332
Query: 272 ----FTWTAMVSGYVQNGMLDEARTFFDQMPQKN---EISYNAMVAGYV-QSNKMDMARE 323
T+ ++S G+++++ +F M + N E+ + A VA + ++ ++ A +
Sbjct: 333 EPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEK 392
Query: 324 LFEAMPSR-NVSSWNTMITGYGQNGDIA----QARKLFDMMPQRDCVSWAAIISG-YAQT 377
E MP + + + +++G G++ AR+L + P++ S+ ++G Y+
Sbjct: 393 FLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK--ASYYVTLAGLYSAA 450
Query: 378 GHYEEA 383
G ++EA
Sbjct: 451 GRFDEA 456
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 237/483 (49%), Gaps = 44/483 (9%)
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF 272
N LM + L A K+FD+M DV+SWN+++SGY Q G + LF + DVF
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 273 ----TWTA------------------------------------MVSGYVQNGMLDEART 292
++TA ++ Y + G +D+A
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 293 FFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQA 352
F M +K+ +S+NA+VA ++ K+++ F MP+ + ++N +I + ++GD A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 353 RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
++ MP + SW I++GY + EA F ++ G + + S L+ A +
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 413 AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 472
A + G IH K G ++ V +AL+ MY KCG + A +F + K+++ WN MI
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 473 AGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACSHAGL-IDRGTEYFYSMNKDY 530
+GYAR+G +A+ +F +K +KPD T + +L+ CSH + ++ YF M +Y
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEY 453
Query: 531 SVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKA 590
+ PS +H +I +G+ G + +A+ +++ F +W ALLGA + + +
Sbjct: 454 RIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTV 513
Query: 591 AEMVFKM--EPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 648
A + ++ + +Y+++SNLYA RW + G +R MR+ GV K G SW++ + K
Sbjct: 514 AAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKC 573
Query: 649 HKF 651
+
Sbjct: 574 SSY 576
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 202/464 (43%), Gaps = 65/464 (14%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSL 103
++ DPD++ WN ++S ++++G + +F + R + S+ A ++ R L
Sbjct: 115 EMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPL 174
Query: 104 ARDLFDKMPQRDL-----VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
+ K+ + L V N ++ Y + + DA +F M +KD VSWNA+++ +
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 159 QNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG 218
+NG + F+QMP+ + +++N L+ A+V +G A ++ + SWN ++ G
Sbjct: 235 RNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTG 294
Query: 219 FVKRKMLGAARKLFDKMH---VR------------------------------------D 239
+V + G A + F KMH VR
Sbjct: 295 YVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSR 354
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
VV + +I Y++ G + A+ +F P +++ W M+SGY +NG EA F+Q+ Q
Sbjct: 355 VVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414
Query: 300 KNEIS------YNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQNGD 348
+ + N + M++ FE M + +V ++I GQ G+
Sbjct: 415 ERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGE 474
Query: 349 IAQARKLF-DMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
+ QA+++ + D V+W A++ + + A + ++ G++ +S
Sbjct: 475 VWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMS 534
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCF--VGNALLGMYFKCGS 449
A E +++ GQ+ K E+G VG++ + KC S
Sbjct: 535 NL--YAYHERWREV-GQIRKIMRESGVLKEVGSSWIDSRTKCSS 575
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 129/319 (40%), Gaps = 79/319 (24%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLF------DSM 142
N+++ Y + A +FD+MP D++SWN +++GYV++ R + LF D
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 143 PQK----------------------------------DVVSWNAMLSGYAQNGYADEARE 168
P + +VV N ++ Y + G+ D+A
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAA 228
VF M K+ +SWN ++A+ NG++E F + + +++N L+ FVK A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 229 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----------------------- 265
++ M + SWNT+++GY +A F +
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 266 -----------SPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMV 309
H+ V +A++ Y + GML A F MP+KN I +N M+
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 310 AGYVQSNKMDMARELFEAM 328
+GY ++ A +LF +
Sbjct: 394 SGYARNGDSIEAIKLFNQL 412
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 265/559 (47%), Gaps = 33/559 (5%)
Query: 48 DVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNAR----FSL 103
D+ L WN ++S G + F + R + + G L+ +
Sbjct: 174 DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDI 233
Query: 104 ARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ 159
++ L ++ ++ N +++ Y + A R+F D+VSWNA++ A+
Sbjct: 234 SKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 293
Query: 160 NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEE--AC------RLFDSKSDWELIS 211
+ +A ++F MP G + + + + +C L + + ++
Sbjct: 294 SENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVL 353
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYA-QDGDMSQAKNLFDQ----- 265
N L+ + K L +R FD + +++V WN ++SGYA +DG + + LF Q
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLS--LFLQMLQMG 411
Query: 266 -SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP-QKNEISYNAMVAGYVQSNKMDMARE 323
P + F+ TA+ S V L + + +M + N+ ++++ Y ++ M+ A
Sbjct: 412 FRPTEYTFS-TALKSCCVTE--LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 324 LFE-AMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
L + A +V N + Y + G ++ KL + Q D VSW I+ +++ ++EE
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG-CFVGNALL 441
+ +F + + ++ TF LS C+ + L LG IHG + KT + FV N L+
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
MY KCGSI VFE EK++++W +I+ HG+G++AL F+ ++G KPD +
Sbjct: 589 DMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV 648
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
+ + +L+AC H G++ G F M KDY V P HY C +DLL R G L+EA+ L+R
Sbjct: 649 SFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIRE 707
Query: 562 MPFEPPAASWGALL-GASR 579
MPF A W L G +R
Sbjct: 708 MPFPADAPVWRTFLDGCNR 726
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 212/441 (48%), Gaps = 57/441 (12%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM------ 173
N +++ Y + + A ++FD MP+++ VS+N ++ GY++ G D+A VF +M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 174 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
P+++ +S GLL+ C D ++ +L + G F+ +G
Sbjct: 113 PNQSTVS--GLLS-----------CASLDVRAGTQLHGLSLKYGLFMADAFVGTC----- 154
Query: 234 KMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 293
++ Y + + A+ +F+ P + + TW M+S G L E F
Sbjct: 155 ------------LLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 294 FDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQ 345
F ++ + E S+ ++ G +D++++L + + +S N++I+ YG+
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 346 NGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCA 405
G+ A ++F D VSW AII A++ + +AL +F+ + G S N+ T+
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 406 LSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV 465
L + + L G+QIHG ++K G ETG +GNAL+ Y KCG++ ++ F+ I +K++
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 466 VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS-------HAGLIDR 518
V WN +++GYA G L +F M +G +P E T L +C H+ ++
Sbjct: 383 VCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRM 441
Query: 519 GTEYFYSMNKDYSVTPSSKHY 539
G E + DY ++ + Y
Sbjct: 442 GYE-----DNDYVLSSLMRSY 457
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 149/644 (23%), Positives = 275/644 (42%), Gaps = 84/644 (13%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM------ 111
N +IS + + G A +VF+ MP R+ VS+N +I GY + A +F +M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 112 PQRDLVSWNVMLTGYVRNRRLGD---ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEARE 168
P + VS +L+ + R G L + D +L Y + + A +
Sbjct: 113 PNQSTVSG--LLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 169 VFYQMPHKNAISWNGLLAAYVHNGRIEEACRLF-----------DSKSDWELISWNCLMG 217
VF MP K+ +WN +++ H G ++E F +S L +C+
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 218 GFVKRKM-LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTA 276
+ +++ A +K D ++ N++IS Y + G+ A+ +F + D+ +W A
Sbjct: 231 LDISKQLHCSATKKGLDC----EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 277 MVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
++ ++ +A F MP+ N+ +Y +++ + R++ M +N
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKN 345
Query: 333 -----VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMF 387
+ N +I Y + G++ +R FD + ++ V W A++SGYA L++F
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLF 404
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL------ 441
+++ + G TFS AL +C EL +Q+H +V+ GYE +V ++L+
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSC---CVTEL-QQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 442 --------------------------GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
G+Y + G E+ + +E+ D VSWN IA
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK-DYSVTP 534
+R + ++ + +F+ M ++PD+ T V +LS CS + G+ + K D+S
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCAD 580
Query: 535 SSKHYTC--MIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG-NTELGEKAA 591
+ + C +ID+ G+ G + + E +W AL+ IHG E EK
Sbjct: 581 T---FVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEKFK 636
Query: 592 EMV-FKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
E + +P +L+ G + + +M+D GV+
Sbjct: 637 ETLSLGFKPDRVSFISILTACRHG-GMVKEGMGLFQKMKDYGVE 679
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 9/364 (2%)
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 278
F + K L A + ++ V N +IS Y + G++S A +FDQ P ++ ++ ++
Sbjct: 28 FARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTII 87
Query: 279 SGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDM-------ARELFEAMPSR 331
GY + G +D+A F +M + + V+G + +D+ L +
Sbjct: 88 KGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMA 147
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+ ++ YG+ + A ++F+ MP + +W ++S G +E + F E+
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELV 207
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
R G SL S+F L + + L++ KQ+H K G + V N+L+ Y KCG+
Sbjct: 208 RMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTH 267
Query: 452 EANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
A +F+ D+VSWN +I A+ +AL +F SM G P++ T V VL S
Sbjct: 268 MAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSS 327
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
L+ G + + K+ T +ID + G LE+++ L + + W
Sbjct: 328 LVQLLSCGRQIHGMLIKNGCETGIVLG-NALIDFYAKCGNLEDSR-LCFDYIRDKNIVCW 385
Query: 572 GALL 575
ALL
Sbjct: 386 NALL 389
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 179/322 (55%), Gaps = 16/322 (4%)
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQ---TGHY--EEALNMFIEIK 391
T++ Y +NGD+ ARK+FD MP+R V+W A+I GY G++ +A+ +F
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 392 RDGESL--NRSTFSCALSTCADIAALELGKQIHGQVVKTGY--ETGCFVGNALLGMYFKC 447
G + +T C LS + LE+G +HG + K G+ E F+G AL+ MY KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 448 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
G + A VFE ++ K+V +W +M G A +G G + + M G+KP+EIT +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPP 567
SA H GL++ G E F SM + VTP +HY C++DLLG+AGR++EA + MP +P
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 568 AASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGM-------YVLLSNLYAASGRWAD 620
A +L A I+G T +GE+ + + ++E + + YV LSN+ A G+W +
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 621 AGNMRSRMRDVGVQKVTGYSWV 642
+R M++ ++ GYS+V
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 44/314 (14%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQ-----NGYADEAREVFYQMP 174
+L Y +N L AR++FD MP++ V+WNAM+ GY N A +A +F +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRF- 209
Query: 175 HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDK 234
+ V C L + S L+ L+ G++++ LG ++
Sbjct: 210 --------SCCGSGVRPTDTTMVCVL-SAISQTGLLEIGSLVHGYIEK--LGFTPEV--- 255
Query: 235 MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
DV ++ Y++ G ++ A ++F+ ++VFTWT+M +G NG +E
Sbjct: 256 ----DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLL 311
Query: 295 DQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-----NVSSWNTMITGYGQ 345
++M + NEI++ ++++ Y ++ ELF++M +R + + ++ G+
Sbjct: 312 NRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGK 371
Query: 346 NGDIAQARKLFDMMPQR-DCV---SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 401
G I +A + MP + D + S S Y +T EE +EI+R+ E L+
Sbjct: 372 AGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG-- 429
Query: 402 FSCALSTCADIAAL 415
S C D AL
Sbjct: 430 -----SECEDYVAL 438
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 415 LELGKQIHGQVVKTG--YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMI 472
L +G+ +HG V K G YE+ +G LL Y K G + A VF+ + E+ V+WN MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESE-LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 473 AGYARHG-----FGKQALMVFESMKTI--GVKPDEITMVGVLSACSHAGLIDRGTEYFYS 525
GY H ++A+++F GV+P + TMV VLSA S GL++ G+ +
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGS-LVHG 244
Query: 526 MNKDYSVTPSSKHY--TCMIDLLGRAGRLEEAQDLMRNM 562
+ TP + T ++D+ + G L A + M
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELM 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 128/348 (36%), Gaps = 100/348 (28%)
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYV--------------------- 313
T ++ Y +NG L AR FD+MP++ +++NAM+ GY
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 314 ---------------------QSNKMDMAR------ELFEAMPSRNVSSWNTMITGYGQN 346
Q+ +++ E P +V ++ Y +
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 347 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 406
G + A +F++M ++ +W ++ +G A G E N+ + G N TF+ L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 407 STCADIAALELGKQIHGQVVKTGYET-------GCFVGNALLGMYFKCGSIGEANDVFEG 459
S I +E G ++ + +KT + GC V LLG K G I EA
Sbjct: 331 SAYRHIGLVEEGIELF-KSMKTRFGVTPVIEHYGCIVD--LLG---KAGRIQEA------ 378
Query: 460 IEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
++ + + +KPD I + + +ACS G G
Sbjct: 379 ----------------------------YQFILAMPIKPDAILLRSLCNACSIYGETVMG 410
Query: 520 TEYFYSM----NKDYSVTPSS-KHYTCMIDLLGRAGRLEEAQDLMRNM 562
E ++ +D ++ S + Y + ++L G+ E + L + M
Sbjct: 411 EEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEM 458
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 191/363 (52%), Gaps = 16/363 (4%)
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 468
C D AL+ K +H + + + N+++ MY CGS+ +A VF + E+++ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
+I +A++G G+ A+ F K G KPD + AC G ++ G +F SM K
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
+Y + P +HY ++ +L G L+EA + +M EP W L+ SR+HG+ LG+
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGD 368
Query: 589 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKI 648
+ +MV +++ + + + AG + + D+ +K+ + I
Sbjct: 369 RCQDMVEQLDA-------------SRLNKESKAGLVPVKSSDLVKEKLQRMA-KGPNYGI 414
Query: 649 HKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLA 708
GD PE +Y L+ L M GYV +KL LHDV++E K+ L H+E+ A
Sbjct: 415 RYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFA 474
Query: 709 VAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCG 768
L PA IRV+KNLRVC DCHNA+K +SKIVGR +I RD+ RFHH +G+CSC
Sbjct: 475 FISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCR 534
Query: 769 DYW 771
+YW
Sbjct: 535 EYW 537
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 265/525 (50%), Gaps = 51/525 (9%)
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVH 190
A LFD +PQ+D+ S N+ LS + ++G ++ +F Q+ P ++ ++ +L A
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGA--- 93
Query: 191 NGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGY 250
C L G V M+ + +S +I Y
Sbjct: 94 -------CSLLSYPET----------GRQVHALMIKQGAE-------TGTISKTALIDMY 129
Query: 251 AQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYN 306
++ G + + +F+ +D+ +W A++SG+++NG EA F M ++ +E + +
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLS 189
Query: 307 AMVAGYVQSNKMDMAREL--FEAMPSRNVSSWNT-MITGYGQNGDIAQARKLFDMM-PQR 362
++V + +++ + R++ T MI+ Y G I +A K+++ +
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHT 249
Query: 363 DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIH 422
D V ++ISG + +Y+EA F+ + R + N S +L+ C+D + L +GKQIH
Sbjct: 250 DEVMLNSLISGCIRNRNYKEA---FLLMSR--QRPNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 423 GQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK 482
++ G+ + + N L+ MY KCG I +A +F I K VVSW +MI YA +G G
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 483 QALMVFESM--KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 540
+AL +F M + GV P+ +T + V+SAC+HAGL+ G E F M + Y + P ++HY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 541 CMIDLLGRAGRLEE----AQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAA-EMVF 595
C ID+L +AG EE + +M N P A W A+L A ++ + GE A ++
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME 484
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
+ P N+ +YVL+SN YAA G+W +R ++++ G+ K G+S
Sbjct: 485 ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 52/372 (13%)
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQ 159
A LFD++PQRDL S N L+ ++R+ D LF + P ++ +L +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 160 NGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 215
Y + R+V M + A IS L+ Y G + ++ R+F+S + +L+SWN L
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 216 MGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQ---SPH 268
+ GF++ A +F M+ V + ++++ A + Q K + +
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQM-PQKNEISYNAMVAGYVQSNKMDMARELFE- 326
V TAM+S Y G+++EA ++ + +E+ N++++G +++ A L
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276
Query: 327 ------------AMPSRNVSSW---------------------NTMITGYGQNGDIAQAR 353
A S N W N ++ YG+ G I QAR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESL--NRSTFSCALSTCAD 411
+F +P + VSW ++I YA G +AL +F E+ +G + N TF +S CA
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396
Query: 412 IAALELGKQIHG 423
++ GK+ G
Sbjct: 397 AGLVKEGKECFG 408
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 142/351 (40%), Gaps = 66/351 (18%)
Query: 85 SVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ 144
++S A+I Y + + +F+ + ++DLVSWN +L+G++RN + +A +F +M +
Sbjct: 119 TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR 178
Query: 145 KD--------------------------------------VVSWNAMLSGYAQNGYADEA 166
+ VV AM+S Y+ G +EA
Sbjct: 179 ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 167 REVFYQM-PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGG------- 218
+V+ + H + + N L++ + N +EA L + + + L G
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLW 298
Query: 219 FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMV 278
K+ A R F V D N ++ Y + G + QA+ +F P + V +WT+M+
Sbjct: 299 IGKQIHCVALRNGF----VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 279 SGYVQNGMLDEARTFFDQMPQK------NEISYNAMVAGYVQSNKMDMARELFEAMPSR- 331
Y NG +A F +M ++ N +++ +++ + + +E F M +
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 332 ----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD-----CVSWAAIISG 373
+ I + G+ + +L + M + D C W A++S
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSA 465
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 127/296 (42%), Gaps = 55/296 (18%)
Query: 60 VISTHMRNGHCDSALRVFNTMPRRS-SVSYNAMISGYLRNARFSLARDLFDKM-PQRDLV 117
+IS + G + A++V+N++ + V N++ISG +RN + A L + P ++
Sbjct: 225 MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVL 284
Query: 118 SWNV-------------------MLTGYVRNRRLGD--------------ARRLFDSMPQ 144
S ++ + G+V + +L + AR +F ++P
Sbjct: 285 SSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPS 344
Query: 145 KDVVSWNAMLSGYAQNGYADEAREVFYQMPHK------NAISWNGLLAAYVHNGRIEEAC 198
K VVSW +M+ YA NG +A E+F +M + N++++ +++A H G ++E
Sbjct: 345 KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGK 404
Query: 199 RLFD-SKSDWELIS----WNCLMGGFVKRKMLGAARKLFDKMHVRDVVS-----WNTMIS 248
F K + L+ + C + K +L ++M D S W ++S
Sbjct: 405 ECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLS 464
Query: 249 GYAQDGDMSQ----AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
+ + D+++ A+ L +++ ++ + + + Y G D ++ K
Sbjct: 465 ACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNK 520
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 245/500 (49%), Gaps = 70/500 (14%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYL--------------------- 96
N +IS+ +R G A +VF++MP +++V++ AMI GYL
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 97 ---------------RNARFSLARDLFDKMPQR---DLVSWNVMLTGYVRNRRLGDARRL 138
R A F L R + M + +L+ + ++ Y + L A R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC 198
FD M +KDV+SW A++S ++ G+ +A +F M + W ++ N C
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH----W------FLPNEFT--VC 288
Query: 199 RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQ 258
+ + S+ + + + + V ++M+ DV +++ YA+ G++S
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKT-----------DVFVGTSLMDMYAKCGEISD 337
Query: 259 AKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQS--- 315
+ +FD +++ TWT++++ + + G +EA + F M +++ I+ N V +++
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 316 -NKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAI 370
+ + +EL + +NV +T++ Y + G+ A + +P RD VSW A+
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
ISG + GH EAL+ E+ ++G N T+S AL CA+ +L +G+ IH K
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
+ FVG+AL+ MY KCG + EA VF+ + EK++VSW MI GYAR+GF ++AL +
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 491 MKTIGVKPDEITMVGVLSAC 510
M+ G + D+ +LS C
Sbjct: 578 MEAEGFEVDDYIFATILSTC 597
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 194/369 (52%), Gaps = 15/369 (4%)
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ---- 299
N +IS + GD+ A+ +FD P ++ TWTAM+ GY++ G+ DEA F+ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 300 -KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSW---NTMITGYGQNGDIAQARKL 355
NE + ++ + + ++ R++ M V + ++++ Y Q G++ A +
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 356 FDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
FDMM ++D +SW A+IS ++ GH +A+ MFI + N T L C++ AL
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGY 475
G+Q+H VVK +T FVG +L+ MY KCG I + VF+G+ ++ V+W ++IA +
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
AR GFG++A+ +F MK + + +T+V +L AC G + G E + K+ S+ +
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKN 419
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
+ ++ L + G +A ++++ +P SW A+ I G + LG ++ + F
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAM-----ISGCSSLGHESEALDF 473
Query: 596 KMEPHNSGM 604
E G+
Sbjct: 474 LKEMIQEGV 482
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 229/468 (48%), Gaps = 25/468 (5%)
Query: 151 NAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI 210
N ++S + G AR+VF MP KN ++W ++ Y+ G +EA LF+ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 211 SWN-----CLMGGFVKRKMLGAARKLFD---KMHVRDVVSWNTMISGYAQDGDMSQAKNL 262
N CL+ +R R++ K+ V +++ ++++ YAQ G+++ A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKM 318
FD +DV +WTA++S + G +A F M NE + +++ + +
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 319 DMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
R++ + R + + +++ Y + G+I+ RK+FD M R+ V+W +II+ +
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
A+ G EEA+++F +KR N T L C + AL LGK++H Q++K E
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
++G+ L+ +Y KCG +A +V + + +DVVSW MI+G + G +AL + M
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 495 GVKPDEITMVGVLSAC--SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
GV+P+ T L AC S + LI R +S+ K + + +I + + G +
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRS---IHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 553 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
EA + +MP E SW A++ +G +A +++++ME
Sbjct: 538 SEAFRVFDSMP-EKNLVSWKAMIMGYARNG---FCREALKLMYRMEAE 581
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 180/392 (45%), Gaps = 24/392 (6%)
Query: 45 NKPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLA 104
N V +L+ + ++ + + G SALR F+ M + +S+ A+IS R A
Sbjct: 209 NMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKA 268
Query: 105 RDLFDKM------PQRDLVSWNVMLTGYVRNRRLGDA--RRLFDSMPQKDVVSWNAMLSG 156
+F M P V + + R G + M + DV +++
Sbjct: 269 IGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDM 328
Query: 157 YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLM 216
YA+ G + R+VF M ++N ++W ++AA+ G EEA LF LI+ N +
Sbjct: 329 YAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTV 388
Query: 217 GGFVKRKMLGAARKLFDKMHV--------RDVVSWNTMISGYAQDGDMSQAKNLFDQSPH 268
++ A L ++H ++V +T++ Y + G+ A N+ Q P
Sbjct: 389 VSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL 324
+DV +WTAM+SG G EA F +M Q+ N +Y++ + S + + R +
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 325 FEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHY 380
NV + +I Y + G +++A ++FD MP+++ VSW A+I GYA+ G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADI 412
EAL + ++ +G ++ F+ LSTC DI
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/643 (24%), Positives = 286/643 (44%), Gaps = 80/643 (12%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL- 116
N+ I +++G+ SA F+ M R V+YN +ISG R A +L+ +M L
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 117 ------------------------VSWNVMLTGY-----VRNR--------RLGD-ARRL 138
V V+ G+ VR+ RL D A +L
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKL 169
Query: 139 FDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEAC 198
FD M +++ N +L + Q G + EV+ +M + ++ NGL Y+ G +
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELE-GVAKNGLTYCYMIRGCSHDR- 227
Query: 199 RLFDSKSDWELI---SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGD 255
+++ K L+ WN + ++ N ++ Y+ GD
Sbjct: 228 LVYEGKQLHSLVVKSGWN-----------------------ISNIFVANVLVDYYSACGD 264
Query: 256 MSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----------PQKNEISY 305
+S + F+ P +DV +W ++VS G + ++ F +M P + +++
Sbjct: 265 LSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNF 324
Query: 306 NAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
+ + +QS K L ++ + +I YG+ I + L+ +P +
Sbjct: 325 CSRNSD-IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLE 383
Query: 366 SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS--TCADIAALELGKQIHG 423
++++ G ++ + MF + +G ++ T S L + + +L +H
Sbjct: 384 CCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHC 443
Query: 424 QVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQ 483
+K+GY V +L+ Y K G + VF+ ++ ++ ++I GYAR+G G
Sbjct: 444 CAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTD 503
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
+ + M + + PDE+T++ VLS CSH+GL++ G F S+ Y ++P K Y CM+
Sbjct: 504 CVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMV 563
Query: 544 DLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSG 603
DLLGRAG +E+A+ L+ + +W +LL + RIH N +G +AAE++ +EP N
Sbjct: 564 DLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFA 623
Query: 604 MYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEVQN 646
+Y+ +S Y G + + +R + + GYS V V+N
Sbjct: 624 VYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 190/438 (43%), Gaps = 69/438 (15%)
Query: 108 FDKMPQRDLVSW---NVMLTGYVRNRRLGD---------ARRLFDSMPQKDVVSWNAMLS 155
F P+ D S+ N Y NRR+ + A FD M +DVV++N ++S
Sbjct: 26 FIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLIS 85
Query: 156 GYAQNGYADEAREVFYQMP----HKNAISWNGLLAA-----YVHNGRIEEACRLFDSKSD 206
G ++ G + A E++ +M ++A ++ +L+ + G I+ CR+
Sbjct: 86 GNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG-IQVHCRVISLGFG 144
Query: 207 WELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFD-- 264
+ + L+G + +++ A KLFD+M R++ N ++ + Q G ++K LF+
Sbjct: 145 CNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVY 201
Query: 265 -----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-----KNEISYNAMVAGYVQ 314
+ ++ T+ M+ G + ++ E + + + N N +V Y
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 315 SNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
+ + F A+P ++V SWN+ I+S
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNS-------------------------------IVSVC 290
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
A G ++L++F +++ G+ + F L+ C+ + ++ GKQIH V+K G++
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 435 F-VGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
V +AL+ MY KC I + +++ + ++ N+++ G K + +F M
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 494 IGVKPDEITMVGVLSACS 511
G DE+T+ VL A S
Sbjct: 411 EGTGIDEVTLSTVLKALS 428
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 312 YVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAII 371
++ + +MD + E PS V + N I ++G++ A + FD M RD V++ +I
Sbjct: 26 FIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLI 84
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
SG ++ G A+ ++ E+ G + STF LS C+D G Q+H +V+ G+
Sbjct: 85 SGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFG 144
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
FV +AL+G+Y + A +F+ + ++++ N ++ + + G K+ V+ M
Sbjct: 145 CNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM 204
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
+ GV + +T ++ CSH L+ G +
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 249/536 (46%), Gaps = 42/536 (7%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNA--RFSLARDLFDKMPQRD 115
K++ + G A +VF+ + S+NA++ G + + R+ F +M R+
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM--RE 207
Query: 116 L-VSWNV--------------MLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQN 160
L V NV L ++ L LF+S+ K +++ Y +
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK-----TSLVDMYFKC 262
Query: 161 GYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMG--- 217
G AR VF ++ ++ + W ++A HN R EA LF + E I N ++
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 218 ----GFVKRKMLGA---ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 270
G VK LG A L K +V + +I Y + GDM+ + +F S ++
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL-- 324
+WTA++SGY NG D+A M Q+ + ++ ++ + + +E+
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 325 --FEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
+ + NVS +++ Y + G +LFD + QR+ +W A+I Y +
Sbjct: 443 YALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
+ +F + + T L+ C+D+ AL+LGK++HG ++K +E+ FV ++
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIK 562
Query: 443 MYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
MY KCG + AN F+ + K ++W +I Y + + A+ FE M + G P+ T
Sbjct: 563 MYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFT 622
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 558
VLS CS AG +D +F M + Y++ PS +HY+ +I+LL R GR+EEAQ L
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 299 QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDM 358
+ NE +V Y + A+++F+ S NV SWN ++ G
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRG---------------- 186
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
+ISG + Y++ L+ F E++ G LN + S + A +AL G
Sbjct: 187 ----------TVISGKKR---YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARH 478
+ H +K G F+ +L+ MYFKCG +G A VF+ I E+D+V W MIAG A +
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 479 GFGKQALMVFESMKT-IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
+AL +F +M + + P+ + + +L + G E + K +
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF 353
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHG 582
++ +IDL + G + + + + A SW AL+ +G
Sbjct: 354 VHSGLIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANG 397
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
I +A+ + E AL + +++ G +N +TFS L C +L GKQ+H + G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 431 ETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGK--QALMVF 488
E+ F+ L+ MY CGS+ +A VF+ +V SWN ++ G G + L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 489 ESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGR 548
M+ +GV + ++ V + + A + +G + +++ + S T ++D+ +
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLVDMYFK 261
Query: 549 AGRLEEAQDLMRNMPFEPPAASWGALLG 576
G++ A+ + + E WGA++
Sbjct: 262 CGKVGLARRVFDEI-VERDIVVWGAMIA 288
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 191/381 (50%), Gaps = 25/381 (6%)
Query: 228 ARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF-----DQSPHQDVFTWTAMVS--- 279
A +F+++ +WN MI + + +A LF D FT+ ++
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 280 -------GYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
G +G+ +A F D Q N ++ Y + K D R++F+ MP R+
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQ------NTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 333 VSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKR 392
+ SW TM+ G N + A +F+ MP R+ VSW A+I+ Y + +EA +F ++
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
D N T L + +L +G+ +H K G+ CF+G AL+ MY KCGS+ +
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQD 304
Query: 453 ANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG-VKPDEITMVGVLSACS 511
A VF+ ++ K + +WN+MI HG G++AL +FE M+ V+PD IT VGVLSAC+
Sbjct: 305 ARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASW 571
+ G + G YF M + Y ++P +H CMI LL +A +E+A +L+ +M +P +
Sbjct: 365 NTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP---DF 421
Query: 572 GALLGASRIHGNTELGEKAAE 592
+ G G E E ++
Sbjct: 422 NSSFGNEYTDGMNETNETPSQ 442
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 89 NAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV 148
N ++ Y + + R +FDKMP R +VSW ML G V N +L A +F+ MP ++VV
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 149 SWNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSK 204
SW AM++ Y +N DEA ++F +M N + LL A G + + D
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 205 SDWELISWNCLMGG-----FVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA 259
+ +C +G + K L ARK+FD M + + +WN+MI+ G +A
Sbjct: 278 HKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 260 KNLFDQ-----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNA-MV 309
+LF++ S D T+ ++S G + + +F +M Q IS +NA M+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 310 AGYVQSNKMDMARELFEAM---PSRNVSSWNTMITGYGQNGDIAQARKL 355
Q+ +++ A L E+M P N S N G + + ++
Sbjct: 397 QLLEQALEVEKASNLVESMDSDPDFNSSFGNEYTDGMNETNETPSQHQI 445
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 190/368 (51%), Gaps = 25/368 (6%)
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSW 468
C ++ ALE + +H + + + ++ MY C S +A +VF + +++ +W
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 469 NTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNK 528
TMI A++G G++A+ +F G KPD+ V AC G I+ G +F SM +
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 529 DYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
DY + S + Y +I++L G L+EA D + M EP W L+ + G ELG+
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 589 KAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYSWVEV---- 644
+ AE++ K++ + + ++AG + ++ D ++K+ + ++
Sbjct: 298 RFAELIKKLDA-------------SRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDD 344
Query: 645 -QNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYH 703
+ ++H+F GD H + AF L ++M G+V +T++ VEEEEKE L +
Sbjct: 345 PKKRMHEFRAGDTSHL--GTVSAF-RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFR 401
Query: 704 SEKLAVAFGILTIPAGRPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEG 763
S KLA A I+ A RP+ V++N+R C D HN K IS I GR +I RD ++H + G
Sbjct: 402 SNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNG 461
Query: 764 ICSCGDYW 771
+CSC DYW
Sbjct: 462 VCSCKDYW 469
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 307 AMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVS 366
A + G V++ ++ AR + + + + S++T+I Y A +F+ MP+R+ +
Sbjct: 119 AKLCGEVEA--LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSET 176
Query: 367 WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVV 426
W +I A+ G E A++MF +G ++ F C I + G +H + +
Sbjct: 177 WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESM 235
Query: 427 KTGYETGCFVGN--ALLGMYFKCGSIGEANDVFEGIE-EKDVVSWNTM-----IAGYARH 478
Y + + ++ M CG + EA D E + E V W T+ + GY
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 479 G 479
G
Sbjct: 296 G 296
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 193/396 (48%), Gaps = 20/396 (5%)
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G++ EA+ + ++ G +++ C ALE + +H ++ + C VG
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII--ALVSPCDVG 155
Query: 438 --NALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
NA++ MY C S+ +A VFE + E + + M+ + +G+G++A+ +F K G
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
KP+ V S C+ G + G+ F +M ++Y + PS +HY + +L +G L+EA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 556 QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAAS 615
+ + MP EP W L+ SR+HG+ ELG++ AE+V K++
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA-------------TRL 322
Query: 616 GRWADAGNMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKM 675
+ + AG + ++ D ++ + S + F D HP+ + IY L L ++
Sbjct: 323 DKVSSAGLVATKASDFVKKEPSTRSEPYFYS---TFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 676 RREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVIKNLRVCEDCH 735
+ GYV T+ + E + + + E++AV +L I ++ N+R+ DCH
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCH 439
Query: 736 NAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
+ +K +S I GR +I RD+ +H F G+C C + W
Sbjct: 440 DMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 236/492 (47%), Gaps = 41/492 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P ++++NK++S + + + + M +Y+ I+ + R ++ SLA +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 108 FDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQ 159
KM + D+V+ + +L GY ++R+ DA L D M + D ++ ++ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELIS 211
+ A EA + QM + + +++ ++ G I+ A L + ++ ++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAK----NLF 263
+N ++ K + + A LF +M + +VV++N++I+ G S A N+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
++ + +V T+ A++ + + G L EA ++M Q+ + I+YN ++ G+ N++D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 320 MARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A+++F+ M S+ N+ ++NT+I G+ + + +LF M QR + V++ II
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G+ Q G + A +F ++ + + T+S L L+ I + K+ E
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK-DVVSWNTMIAGYARHGFGKQALMVFES 490
F+ N ++ K G +GEA D+F + K DVV++NTMI+G ++A +F
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 491 MKTIGVKPDEIT 502
MK G P+ T
Sbjct: 561 MKEDGTLPNSGT 572
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 194/422 (45%), Gaps = 60/422 (14%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDL 107
PDL+ + V++ + G D AL + N M + + V +N +I + +A DL
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
F +M + ++V++N ++ R DA RL +M +K +VV++NA++ + +
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----S 211
G EA ++ +M + + I++N L+ + + R++EA ++F + + +
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
+N L+ GF K K + +LF +M R + V++ T+I G+ Q GD A+ +F Q
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 268 HQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARE 323
D+ T++ ++ G G LD A F Y+Q ++M++
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFK----------------YLQKSEMEL--- 501
Query: 324 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLF-DMMPQRDCVSWAAIISGYAQTGHYEE 382
N+ +NTMI G + G + +A LF + + D V++ +ISG +E
Sbjct: 502 --------NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 383 ALNMFIEIKRDGESLNRSTFSCA----LSTCADIAALELGKQIHGQVVKTGYETGCFVGN 438
A ++F ++K DG N T++ L C A+ EL K++ T V N
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Query: 439 AL 440
L
Sbjct: 614 ML 615
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/602 (20%), Positives = 240/602 (39%), Gaps = 106/602 (17%)
Query: 71 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 122
D A+ +F M P S V +N ++S + +F L L ++M DL ++++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 123 LTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWN 182
+ + R +L A A+L+ + GY + ++ +
Sbjct: 125 INCFCRRSQLSLAL---------------AVLAKMMKLGY------------EPDIVTLS 157
Query: 183 GLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR 238
LL Y H+ RI +A L D + + ++ L+ G A L D+M R
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 239 ----DVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLDEA 290
D+V++ T+++G + GD+ A NL ++ +V + ++ + ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 291 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITG 342
F +M K N ++YN+++ + A L M + NV ++N +I
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 343 YGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
+ + G + +A KL + M QR D +++ +I+G+ +EA MF + N
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
T+ N L+ + KC + + ++F
Sbjct: 398 IQTY-----------------------------------NTLINGFCKCKRVEDGVELFR 422
Query: 459 GIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
+ ++ + V++ T+I G+ + G A MVF+ M + V D +T +L G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGAL 574
+D F + K + + Y MI+ + +AG++ EA DL ++ +P ++ +
Sbjct: 483 KLDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTM 541
Query: 575 LGASRIHGNTELGEKAAEMVFKMEPH----NSGMYVLLSNLYAASGRWADAGNMRSRMRD 630
+ + L ++A ++ KM+ NSG Y L A + + MR
Sbjct: 542 ISG---LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 631 VG 632
G
Sbjct: 599 SG 600
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 162/390 (41%), Gaps = 24/390 (6%)
Query: 287 LDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNT 338
+D+A F M P + + +N +++ + NK ++ L E M + +S +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 339 MITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
I + + ++ A K+ + + D V+ +++++GY + +A+ + ++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN 454
+ TF+ + + Q+V+ G + ++ K G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 455 DVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
++ +E + +VV +NT+I ++ + A+ +F M+T G++P+ +T +++
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEPP 567
+ G + +M + + P+ + +ID + G+L EA+ L M +P
Sbjct: 304 CNYGRWSDASRLLSNM-LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 568 AASWGALLGASRIHGNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 626
++ L+ +H + ++ + MV K N Y L N + R D +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 627 RMRDVGVQKVTGYSWVEVQNKIHKFTVGDC 656
M G+ T +Q F GDC
Sbjct: 423 EMSQRGLVGNTVTYTTIIQG---FFQAGDC 449
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 243/492 (49%), Gaps = 44/492 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P +++++K++S + D + + M + +Y+ +I+ + R ++ LA +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 108 FDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQ 159
KM + ++V+ + +L GY ++R+ +A L D M Q + V++N ++ G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----IS 211
+ A EA + +M K + +++ ++ G + A L + +L +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF---- 263
+N ++ G K K + A LF +M + +VV+++++IS G S A L
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE----ISYNAMVAGYVQSNKMD 319
++ + DVFT++A++ +V+ G L EA +D+M +++ ++Y++++ G+ +++D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 320 MARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A+++FE M S+ +V ++NT+I G+ + + + ++F M QR + V++ +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G Q G + A +F E+ DG N T++ L LE + + ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMV 487
+ N ++ K G + + D+F + K DVV++NTMI+G+ R G ++A +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 488 FESMKTIGVKPD 499
F+ MK G P+
Sbjct: 559 FKEMKEDGTLPN 570
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/579 (20%), Positives = 257/579 (44%), Gaps = 82/579 (14%)
Query: 66 RNG----HCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDL- 116
RNG D A+ +F M P S + ++ ++S + +F + L ++M +
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 117 ---VSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREV 169
++++++ + R +L A + M + ++V+ +++L+GY + EA +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 170 FYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLMGGFVK 221
QM N +++N L+ + + EA L D +L+++ ++ G K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 222 RKMLGAARKLFDKMHVRD----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFT 273
R A L +KM V+ +NT+I G + M A NLF + + +V T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 274 WTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP 329
+++++S G +A M ++ + +++A++ +V+ K+ A +L++ M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 330 SRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYE 381
R++ +++++I G+ + + +A+++F+ M + C V++ +I G+ + E
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALL 441
E + +F E+ + G N T++ + ++ ++I ++V G
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP--------- 464
Query: 442 GMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
+++++NT++ G ++G ++A++VFE ++ ++P
Sbjct: 465 ----------------------NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T ++ AG ++ G + F +++ V P Y MI R G EEA L +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 562 MPFE---PPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
M + P + + L+ A G+ E +AE++ +M
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDR---EASAELIKEM 597
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 130/239 (54%), Gaps = 24/239 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARD 106
+PD+ ++ +I ++ G A ++++ M +R S V+Y+++I+G+ + R A+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 107 LFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
+F+ M + D+V++N ++ G+ + +R+ + +F M Q+ + V++N ++ G
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 159 QNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELI 210
Q G D A+E+F +M N +++N LL NG++E+A +F+ SK + +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQ 265
++N ++ G K + LF + ++ DVV++NTMISG+ + G +A LF +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 203/469 (43%), Gaps = 65/469 (13%)
Query: 164 DEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCL 215
D+A +F +M P + I ++ LL+A + + L + + + +++ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 216 MGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
+ F +R L A + KM + ++V+ +++++GY +S+A L DQ
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ------ 176
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR 331
V+GY Q N +++N ++ G NK A L + M ++
Sbjct: 177 ----MFVTGY-----------------QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 332 ----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWAAIISGYAQTGHYEEA 383
++ ++ ++ G + GD A L + M Q + + II G + H ++A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 384 LNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
LN+F E++ G N T+S +S + ++ +++ F +AL+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 444 YFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
+ K G + EA +++ + ++ +V+++++I G+ H +A +FE M + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLM 559
+T ++ ++ G E F M++ + ++ Y +I L +AG + AQ++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 560 RNMPFE---PPAASWGALLGASRIHGNTELGEKAAEMVF------KMEP 599
+ M + P ++ LL +G E A +VF KMEP
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLE----KAMVVFEYLQRSKMEP 499
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 139/331 (41%), Gaps = 23/331 (6%)
Query: 347 GDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 406
G++ ++R P + ++ ++S A+ ++ +++ +++ G N T+S +
Sbjct: 70 GEMVKSR------PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 407 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA----NDVFEGIEE 462
+ + L L + G+++K GYE ++LL Y I EA + +F +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 463 KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 522
+ V++NT+I G H +A+ + + M G +PD +T V++ G D
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 523 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASR 579
M + + P Y +ID L + +++A +L + M P ++ +L+
Sbjct: 244 LNKMEQG-KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 580 IHGN-TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTG 638
+G ++ ++M+ + + + L + + G+ +A ++ D V++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA----EKLYDEMVKRSID 358
Query: 639 YSWVEVQNKIHKFTVGDCFHPEKDRIYAFLE 669
S V + I+ F C H D E
Sbjct: 359 PSIVTYSSLINGF----CMHDRLDEAKQMFE 385
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDLFDK 110
+ +N +I + G CD A +F M + ++YN ++ G +N + A +F+
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 111 MP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGY 162
+ + + ++N+M+ G + ++ D LF ++ K DVV++N M+SG+ + G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 163 ADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLF 201
+EA +F +M N+ +N L+ A + +G E + L
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/614 (23%), Positives = 267/614 (43%), Gaps = 73/614 (11%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
DPD + +I + + DSA +VFN MP RR+ V+Y +I G R A D
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309
Query: 107 LFDKMPQRDLV----SWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYA 158
LF KM + ++ V++ + R +A L M + ++ ++ ++
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI---- 210
++ARE+ QM K N I++N L+ Y G IE+A + + +L
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 211 SWNCLMGGFVK---RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLF---- 263
++N L+ G+ K K +G K+ ++ + DVV++N++I G + G+ A L
Sbjct: 430 TYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
D+ D +T+T+M+ ++ ++EA FD + QK N + Y A++ GY ++ K+D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 320 MARELFEAMPSRNV----SSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAII 371
A + E M S+N ++N +I G +G + +A L + M Q + +I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
+ G ++ A + F ++ G + T++ + T L + + ++ + G
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIE-------EKDVVSWNTMIAGYARHGFGKQA 484
F ++L+ Y G +G+ N F+ ++ E ++ ++I +GKQ
Sbjct: 670 PDLFTYSSLIKGY---GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
G +P+ M ++ + L+++ E +SVTP++K Y +I
Sbjct: 727 ----------GSEPELCAMSNMMEFDTVVELLEKMVE--------HSVTPNAKSYEKLIL 768
Query: 545 LLGRAGRLEEAQD----LMRNMPFEPPAASWGALLG-ASRIHGNTELGEKAAEMV-FKME 598
+ G L A+ + RN P + ALL ++ + E + +M+
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 599 PHNSGMYVLLSNLY 612
P VL+ LY
Sbjct: 829 PQLESCKVLICGLY 842
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 187/416 (44%), Gaps = 26/416 (6%)
Query: 243 WNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP 298
+NT+++ A+ G + + K ++ + +++T+ MV+GY + G ++EA + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 299 Q----KNEISYNAMVAGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIA 350
+ + +Y +++ GY Q +D A ++F MP RN ++ +I G I
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 351 QARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCAL 406
+A LF M +C ++ +I + EALN+ E++ G N T++ +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 407 STCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 466
+ E +++ GQ+++ G NAL+ Y K G I +A DV E +E + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 467 ----SWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 522
++N +I GY + K A+ V M V PD +T ++ +G D
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 523 FYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASR 579
MN D + P YT MID L ++ R+EEA DL ++ P + AL+
Sbjct: 485 LSLMN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 580 IHGNTELGEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
G + E M+ K NS + L + A G+ +A + +M +G+Q
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/528 (21%), Positives = 228/528 (43%), Gaps = 47/528 (8%)
Query: 97 RNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNA 152
++ RF L L + +N +L R + + ++++ M + V ++N
Sbjct: 171 KDERFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 153 MLSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSK---- 204
M++GY + G +EA + ++ + ++ L+ Y ++ A ++F+
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 205 SDWELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAK 260
+++ L+ G + + A LF KM V ++ +I S+A
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 261 NLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGY 312
NL + ++ T+T ++ ++AR QM +K N I+YNA++ GY
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 313 VQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQR----DC 364
+ ++ A ++ E M SR +S ++N +I GY ++ ++ +A + + M +R D
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDV 462
Query: 365 VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQ 424
V++ ++I G ++G+++ A + + G ++ T++ + + +E +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 425 VVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGF 480
+ + G + AL+ Y K G + EA+ + E + K+ +++N +I G G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 481 GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 540
K+A ++ E M IG++P T ++ G D F M P + YT
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYT 641
Query: 541 CMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGE 588
I R GRL +A+D+M M S +S I G +LG+
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKM--RENGVSPDLFTYSSLIKGYGDLGQ 687
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 240/495 (48%), Gaps = 44/495 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P + ++NK++S + D + + M R + +YN +I+ + R ++ SLA L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 108 FDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQ 159
KM + +V+ + +L GY +R+ DA L D M + D +++ ++ G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELIS 211
+ A EA + +M + N +++ ++ G I+ A L + +K + ++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMIS---GYAQDGDMSQA-KNLF 263
++ ++ K + A LF +M + +V++++++IS Y + D S+ ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
++ + +V T+ A++ +V+ G L EA +D+M ++ + +Y++++ G+ +++D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 320 MARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A+ +FE M S+ NV ++NT+I G+ + I + +LF M QR + V++ +I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G+ Q + A +F ++ DG N T++ L LE + + ++ E
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMV 487
+ N ++ K G + + D+F + K DV+ +NTMI+G+ R G ++A +
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 488 FESMKTIGVKPDEIT 502
F M+ G PD T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/557 (21%), Positives = 245/557 (43%), Gaps = 84/557 (15%)
Query: 65 MRNG----HCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQ--- 113
+RNG D A+ +F M P S +N ++S + +F L L +KM +
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 114 -RDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEARE 168
+L ++N+++ + R ++ A L M + +V+ +++L+GY +A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 169 VFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFV 220
+ QM + I++ L+ + + EA L D L+++ ++ G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 221 KRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVF 272
KR + A L +KM +VV ++T+I + A NLF + ++ +V
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 273 TWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAM 328
T+++++S +A M ++ N +++NA++ +V+ K+ A +L++ M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 329 PSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHY 380
R++ +++++I G+ + + +A+ +F++M +DC V++ +I+G+ +
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 381 EEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNAL 440
+E + +F E+ + G N T++ IHG
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYT---------------TLIHG----------------- 444
Query: 441 LGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 496
+F+ A VF+ + +++++NT++ G ++G ++A++VFE ++ +
Sbjct: 445 ---FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 497 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 556
+P T ++ AG ++ G + F S++ V P Y MI R G EEA
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 557 DLMRNMPFEPPAASWGA 573
L R M + P G
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 196/448 (43%), Gaps = 42/448 (9%)
Query: 189 VHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDV 240
+H+ ++++A LF S+ + +N L+ K K L +KM ++
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 241 VSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
++N +I+ + + +S A L + + T +++++GY + +A DQ
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 297 MPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGD 348
M + + I++ ++ G NK A L + M R N+ ++ ++ G + GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 349 IAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
I A L + M + + V ++ +I + H ++ALN+F E++ G N T+S
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK- 463
+S + ++ +++ NAL+ + K G + EA +++ + ++
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 464 ---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
D+ +++++I G+ H +A +FE M + P+ +T +++ A ID G
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGA 577
E F M++ + ++ YT +I +A + AQ + + M P ++ LL
Sbjct: 421 ELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 578 SRIHGNTELGEKAAEMVF------KMEP 599
+G E A +VF KMEP
Sbjct: 480 LCKNGKLE----KAMVVFEYLQRSKMEP 503
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 236/495 (47%), Gaps = 44/495 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARDL 107
P ++++NK++S + D + + M R V +YN +I+ + R ++ SLA L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 108 FDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQ 159
KM + +V+ + +L GY +R+ DA L D M + D +++ ++ G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELIS 211
+ A EA + +M + N +++ ++ G + A L + +K + +++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF---- 263
+N ++ K + + A LF +M + +VV+++++IS G S A L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
++ + ++ T+ A++ +V+ G EA +D M ++ + +YN++V G+ +++D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 320 MARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A+++FE M S++ V ++NT+I G+ ++ + +LF M R D V++ +I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G G + A +F ++ DG + T+S L + LE ++ + K+ +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMV 487
++ ++ K G + + D+F + K +VV++NTMI+G ++A +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 488 FESMKTIGVKPDEIT 502
+ MK G P+ T
Sbjct: 563 LKKMKEDGPLPNSGT 577
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 178/365 (48%), Gaps = 36/365 (9%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS---- 102
+ D++ +N +I + + H D AL +F M R + V+Y+++IS R+S
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L D+ +K +LV++N ++ +V+ + +A +L+D M ++ D+ ++N++++G+
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 159 QNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEACRLFDSKSDWELI---- 210
+ D+A+++F M K+ +++N L+ + + R+E+ LF S L+
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD-- 264
++ L+ G A+K+F +M D+++++ ++ G +G + +A +FD
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
D++ +T M+ G + G +D+ F + K N ++YN M++G +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 319 DMARELFEAM----PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
A L + M P N ++NT+I + ++GD A + +L M V A+ I
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 375 AQTGH 379
A H
Sbjct: 617 ANMLH 621
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 193/441 (43%), Gaps = 35/441 (7%)
Query: 189 VHNGRIEEACRLF----DSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVV--- 241
+H+ ++++A LF S+ ++ +N L+ K K L +KM ++V
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 242 -SWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
++N +I+ + + +S A L + + T +++++GY + +A DQ
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 297 MPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGD 348
M + + I++ ++ G NK A L + M R N+ ++ ++ G + GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 349 IAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
A L + M + D V + II + H ++ALN+F E++ G N T+S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK- 463
+S Q+ +++ NAL+ + K G EA +++ + ++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 464 ---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
D+ ++N+++ G+ H +A +FE M + PD +T ++ + ++ GT
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWGALLGA 577
E F M+ + + YT +I L G + AQ + + M + P ++ LL
Sbjct: 421 ELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 578 SRIHGNTELGEKAAEMVFKME 598
+ N +L EKA E+ M+
Sbjct: 480 --LCNNGKL-EKALEVFDYMQ 497
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/537 (23%), Positives = 241/537 (44%), Gaps = 45/537 (8%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMP- 112
NKVI +R D A+ ++ M R + S+N +I + + S + F K+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 113 ---QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREV 169
Q D+V++N +L G R+ +A LF M + + A+ + G
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT------ 223
Query: 170 FYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKRKML 225
I++N L+ GR+ EA L + +++++ ++ G K
Sbjct: 224 ------PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 226 GAARKLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAM 277
+A L KM H++ DVV ++ +I +DG S A+ LF + + +VFT+ M
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 278 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR-- 331
+ G+ G +A+ M ++ + +++NA+++ V+ K+ A +L + M R
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Query: 332 --NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
+ ++N+MI G+ ++ A+ +FD+M D V++ II Y + +E + + E
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
I R G N +T++ + ++ L + + +++ G N LL + +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 450 IGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVG 505
+ EA ++FE I+ + D V++N +I G + +A +F S+ GV+PD T
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 506 VLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
++S I F+ M KD P + Y +I +AG ++++ +L+ M
Sbjct: 578 MISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 194/420 (46%), Gaps = 36/420 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
P ++ +N +I+ G A + N M + V+Y +++G + A +L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
KM + D+V ++ ++ ++ DA+ LF M +K +V ++N M+ G+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELIS 211
G +A+ + M + + +++N L++A V G++ EA +L D + ++
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-- 269
+N ++ GF K A+ +FD M DVV++NT+I Y + + + L + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 270 --DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARE 323
+ T+ ++ G+ + L+ A+ F +M + I+ N ++ G+ ++ K++ A E
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 324 LFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYA 375
LFE + + ++N +I G + + +A LF +P + D ++ +ISG+
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
+A +F ++K +G + ST++ + C ++ ++ ++ G+ F
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 242/540 (44%), Gaps = 45/540 (8%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDK 110
+ NKVI +R D A+ ++ M R + S+N +I + + S + F K
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 111 MP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYADEA 166
+ Q D+V++N +L G R+ +A LF M + + A+ + G
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT--- 223
Query: 167 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGGFVKR 222
I++N L+ GR+ EA L + +++++ ++ G K
Sbjct: 224 ---------PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 223 KMLGAARKLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTW 274
+A L KM H++ DVV ++ +I +DG S A+ LF + + +VFT+
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 275 TAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS 330
M+ G+ G +A+ M ++ + +++NA+++ V+ K+ A +L + M
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 331 R----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNM 386
R + ++N+MI G+ ++ A+ +FD+M D V++ II Y + +E + +
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
EI R G N +T++ + ++ L + + +++ G N LL + +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 447 CGSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+ EA ++FE I+ + D V++N +I G + +A +F S+ GV+PD T
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 503 MVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
++S I F+ M KD P + Y +I +AG ++++ +L+ M
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 194/420 (46%), Gaps = 36/420 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
P ++ +N +I+ G A + N M + V+Y +++G + A +L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
KM + D+V ++ ++ ++ DA+ LF M +K +V ++N M+ G+
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELIS 211
G +A+ + M + + +++N L++A V G++ EA +L D + ++
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-- 269
+N ++ GF K A+ +FD M DVV++NT+I Y + + + L + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 270 --DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARE 323
+ T+ ++ G+ + L+ A+ F +M + I+ N ++ G+ ++ K++ A E
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 324 LFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYA 375
LFE + + ++N +I G + + +A LF +P + D ++ +ISG+
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 376 QTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCF 435
+A +F ++K +G + ST++ + C ++ ++ ++ G+ F
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 235/495 (47%), Gaps = 44/495 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P + ++NK++S + D + + M R + +YN +I+ + R ++ SLA L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 108 FDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQ 159
KM + +V+ + +L GY +R+ DA L D M + D +++ ++ G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELIS 211
+ A EA + +M + N +++ ++ G I+ A L + +K + +++
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF---- 263
+N ++ K + + A LF +M + +VV+++++IS G S A L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
++ + ++ T+ A++ +V+ G EA D M ++ + +YN+++ G+ +++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 320 MARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A+++FE M S++ + ++NT+I G+ ++ + +LF M R D V++ +I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G G + A +F ++ DG + T+S L + LE ++ + K+ +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMV 487
++ ++ K G + + D+F + K +VV++NTMI+G ++A +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 488 FESMKTIGVKPDEIT 502
+ MK G PD T
Sbjct: 488 LKKMKEDGPLPDSGT 502
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 176/365 (48%), Gaps = 36/365 (9%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFS---- 102
+ D++ +N +I + + H D AL +F M R + V+Y+++IS R+S
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L D+ +K +LV++N ++ +V+ + +A +L D M ++ D+ ++N++++G+
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 159 QNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSKSDWELI---- 210
+ D+A+++F M K+ ++N L+ + + R+E+ LF S L+
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD-- 264
++ L+ G A+K+F +M D+++++ ++ G +G + +A +FD
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
D++ +T M+ G + G +D+ F + K N ++YN M++G +
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 319 DMARELFEAM----PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGY 374
A L + M P + ++NT+I + ++GD A + +L M V A+ I
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 375 AQTGH 379
A H
Sbjct: 542 ANMLH 546
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 178/417 (42%), Gaps = 31/417 (7%)
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFD 264
+ +N L+ K K L +KM ++ ++N +I+ + + +S A L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 265 Q----SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSN 316
+ + T +++++GY + +A DQM + + I++ ++ G N
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 317 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWA 368
K A L + M R N+ ++ ++ G + GDI A L + M + D V +
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
II + H ++ALN+F E++ G N T+S +S Q+ +++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 429 GYETGCFVGNALLGMYFKCGSIGEA----NDVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
NAL+ + K G EA +D+ + + D+ ++N++I G+ H +A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+FE M + PD T ++ + ++ GTE F M+ + + YT +I
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQ 368
Query: 545 LLGRAGRLEEAQDLMRNMPFE---PPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
L G + AQ + + M + P ++ LL + N +L EKA E+ M+
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG--LCNNGKL-EKALEVFDYMQ 422
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 232/495 (46%), Gaps = 44/495 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDL 107
P +++++K++S + D + M + +YN MI+ R ++ S A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQ 159
KM + +V+ N +L G+ R+ +A L D M Q D V++ ++ G Q
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELIS 211
+ A EA + +M K + +++ ++ G + A L + K + +++
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF---- 263
++ ++ K + + A LF +M + DV +++++IS G S A L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
++ + +V T+ +++ + + G L EA FD+M Q+ N ++YN+++ G+ +++D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 320 MARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A+++F M S++ V ++NT+I G+ + + +LF M +R + V++ +I
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G+ Q + A +F ++ DG N T++ L LE + + K+ E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMV 487
+ N + K G + + D+F + K DV+++NTMI+G+ + G ++A +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 488 FESMKTIGVKPDEIT 502
F MK G PD T
Sbjct: 543 FIKMKEDGPLPDSGT 557
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/571 (21%), Positives = 250/571 (43%), Gaps = 80/571 (14%)
Query: 71 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 122
D A+ +F M P S V ++ ++S + +F L +KM +L ++N+M
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 123 LTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMP---- 174
+ R +L A + M + +V+ N++L+G+ EA + QM
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 175 HKNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARK 230
+ +++ L+ + + EA R+ +L+++ ++ G KR A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 231 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 282
L +KM DVV ++T+I + + A NLF + ++ DVFT+++++S
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 283 QNGM-LDEARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVS 334
G D +R D + +K N +++N+++ + + K+ A +LF+ M R N+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 390
++N++I G+ + + +A+++F +M +DC V++ +I+G+ + + + +F ++
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
R G N T++ IHG +F+
Sbjct: 407 SRRGLVGNTVTYT---------------TLIHG--------------------FFQASDC 431
Query: 451 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
A VF+ + +++++NT++ G ++G ++A++VFE ++ ++PD T +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
AG ++ G + F S++ V P Y MI + G EEA L M +
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 567 PAASWGALLGASRIHGNTELGEKAAEMVFKM 597
P G R H +AE++ +M
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 140/303 (46%), Gaps = 64/303 (21%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARD 106
+P+++ +N +I + G A ++F+ M +RS V+YN++I+G+ + R A+
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 107 LFDKMPQRD----LVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
+F M +D +V++N ++ G+ + +++ D LF M ++ + V++ ++ G+
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 159 QNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEA----------------- 197
Q D A+ VF QM H N +++N LL NG++E+A
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 198 ---------CRLFDSKSDWEL-------------ISWNCLMGGFVKRKMLGAARKLFDKM 235
C+ + W+L I++N ++ GF K+ + A LF KM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 236 H----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGML 287
+ D ++NT+I + +DGD + + L + D T+ +V+ + +G L
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRL 605
Query: 288 DEA 290
D+
Sbjct: 606 DKG 608
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 202/395 (51%), Gaps = 41/395 (10%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
PD +N VI + + A ++ N M R ++Y +++G + R A+DL
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 108 FDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQNGY 162
F ++P+ ++V +N ++ G+V + RL DA+ + M DV ++N+++ GY + G
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 163 ADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNC 214
A EV + M +K N S+ L+ + G+I+EA + + S L + +NC
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 215 LMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQA----KNLFDQS 266
L+ F K + A ++F +M + DV ++N++ISG + ++ A +++ +
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMAR 322
+ T+ +++ +++ G + EAR ++M +EI+YN+++ G ++ ++D AR
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 323 ELFEAM------PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIIS 372
LFE M PS N+S N +I G ++G + +A + M R D V++ ++I+
Sbjct: 585 SLFEKMLRDGHAPS-NISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
G + G E+ L MF +++ +G + TF+ +S
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/515 (21%), Positives = 232/515 (45%), Gaps = 77/515 (14%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
P L + V+ DSAL + M + +SV Y +I + R + A L
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 108 FDKM----PQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
++M D ++N ++ G + R+ +A ++ + M + D +++ +++G +
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 160 NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF 219
G D A+++FY++P E++ +N L+ GF
Sbjct: 335 IGRVDAAKDLFYRIPKP-------------------------------EIVIFNTLIHGF 363
Query: 220 VKRKMLGAARKLFDKM-----HVRDVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQD 270
V L A+ + M V DV ++N++I GY ++G + A + ++ +
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFE 326
V+++T +V G+ + G +DEA ++M + N + +N +++ + + +++ A E+F
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 327 AMPSR----NVSSWNTMITGYGQNGDIAQARKLF-DMMPQ---RDCVSWAAIISGYAQTG 378
MP + +V ++N++I+G + +I A L DM+ + + V++ +I+ + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 379 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 438
+EA + E+ G L+ T++ + ++ + + ++++ G+ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 439 ALLGMYFKCGSIGEAND-----VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
L+ + G + EA + V G D+V++N++I G R G + L +F ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRG-STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 494 IGVKPDEITMVGVLSACSHAG-------LIDRGTE 521
G+ PD +T ++S G L+D G E
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 220/488 (45%), Gaps = 42/488 (8%)
Query: 118 SWNVMLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQNGYADEAREVFYQM 173
S+NV+L V A +F M + + ++ ++ + D A + M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 174 PH----KNAISWNGLLAAYVHNGRIEEACRLFDSK------SDWELISWNCLMGGFVKRK 223
N++ + L+ + R+ EA +L + D E ++N ++ G K
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE--TFNDVILGLCKFD 301
Query: 224 MLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVS 279
+ A K+ ++M +R D +++ +++G + G + AK+LF + P ++ + ++
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIH 361
Query: 280 GYVQNGMLDEARTFFDQMPQKNEI-----SYNAMVAGYVQSNKMDMARELFEAMPSR--- 331
G+V +G LD+A+ M I +YN+++ GY + + +A E+ M ++
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 332 -NVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEALNM 386
NV S+ ++ G+ + G I +A + + M + + V + +IS + + EA+ +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
F E+ R G + TF+ +S ++ ++ + ++ G N L+ + +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 447 CGSIGEAND-----VFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
G I EA VF+G D +++N++I G R G +A +FE M G P I
Sbjct: 542 RGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
+ +++ +G+++ E+ M S TP + +I+ L RAGR+E+ + R
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 562 MPFE--PP 567
+ E PP
Sbjct: 660 LQAEGIPP 667
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 169/421 (40%), Gaps = 51/421 (12%)
Query: 290 ARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITG 342
A F+D + +K ++ ++ + N++D A L M N + T+I
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 343 YGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
+ + +A +L + M CV ++ +I G + EA M + G + +
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
T+ ++ I ++ K + ++ K + N L+ + G + +A V
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 459 GIEEK-----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHA 513
+ DV ++N++I GY + G AL V M+ G KP+ + ++
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 514 GLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAAS 570
G ID M+ D + P++ + C+I + R+ EA ++ R MP +P +
Sbjct: 438 GKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 571 WGALLGASRIHGNTELGE-KAA-----EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 624
+ +L I G E+ E K A +M+ + N+ Y L N + G +A +
Sbjct: 497 FNSL-----ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 625 RSRMRDVG--VQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEELDLKMRREGYVS 682
+ M G + ++T S ++ G C E D+ + E KM R+G+
Sbjct: 552 VNEMVFQGSPLDEITYNSLIK----------GLCRAGEVDKARSLFE----KMLRDGHAP 597
Query: 683 S 683
S
Sbjct: 598 S 598
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/574 (22%), Positives = 262/574 (45%), Gaps = 86/574 (14%)
Query: 71 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 122
D A+ +F M P S V +N ++S + +F L L ++M DL ++++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 123 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPH--- 175
+ + R +L A + M + D+V+ +++L+GY + +A + QM
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 176 -KNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFVKRKMLGAARK 230
+ ++ L+ + + EA L D +L+++ ++ G KR + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 231 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 282
L KM DVV +NT+I G + M A NLF + ++ DVFT+++++S
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 283 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS---- 334
G +A M ++ N ++++A++ +V+ K+ A +L++ M R++
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 390
+++++I G+ + + +A+ +F++M +DC V+++ +I G+ + EE + +F E+
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
+ G N T++ IHG +F+
Sbjct: 425 SQRGLVGNTVTYT---------------TLIHG--------------------FFQARDC 449
Query: 451 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
A VF+ + +++++N ++ G ++G +A++VFE ++ ++PD T +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE- 565
+ AG ++ G E F +++ V+P+ Y MI R G EEA L++ M +
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 566 --PPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
P + ++ L+ A G+ E +AE++ +M
Sbjct: 569 PLPNSGTYNTLIRARLRDGDR---EASAELIKEM 599
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 224/472 (47%), Gaps = 40/472 (8%)
Query: 84 SSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLF 139
++++++ +I+G R S A +L D+M + DL++ N ++ G + + +A L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 140 DSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHN 191
D M Q + V++ +L+ ++G A E+ +M +N A+ ++ ++ +
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 192 GRIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSW 243
G ++ A LF+ +I++N L+GGF KL M R +VV++
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 244 NTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ 299
+ +I + ++G + +A+ L + H+ D T+T+++ G+ + LD+A D M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 300 K----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV----SSWNTMITGYGQNGDIAQ 351
K N ++N ++ GY ++N++D ELF M R V ++NT+I G+ + G +
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 352 ARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
A++LF M R + V++ ++ G G E+AL +F +I++ L+ ++ +
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 408 TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----K 463
+ + ++ + + G + G N ++G K G + EA +F +EE
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 464 DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
D ++N +I + G +++ + E +K G D T+ V+ S L
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 201/400 (50%), Gaps = 40/400 (10%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLARDL 107
P+ + + V++ ++G A+ + M R+ +V Y+ +I G ++ A +L
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
F++M + +++++N+++ G+ R D +L M ++ +VV+++ ++ + +
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELIS 211
G EA E+ +M H+ + I++ L+ + +++A ++ D D + +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
+N L+ G+ K + +LF KM +R D V++NT+I G+ + G ++ AK LF +
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 268 HQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ-KNEIS---YNAMVAGYVQSNKMD 319
+ ++ T+ ++ G NG ++A F+++ + K E+ YN ++ G ++K+D
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 320 MARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A +LF ++P + V ++N MI G + G +++A LF M + D ++ +I
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
+ G +++ + E+KR G S++ ST + +D
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 194/463 (41%), Gaps = 58/463 (12%)
Query: 163 ADEAREVFYQM----PHKNAISWNGLLAAYVHNGR---IEEACRLFDSKS-DWELISWNC 214
AD+A ++F M P I ++ L +A + + C+ + K L + +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 215 LMGGFVK-RKM---LGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ- 269
++ F + RK+ A K+ + + ++++T+I+G +G +S+A L D+
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 270 ---DVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMAR 322
D+ T +V+G +G EA D+M Q N ++Y ++ +S + +A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 323 ELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEE 382
EL M RN+ + D V ++ II G + G +
Sbjct: 249 ELLRKMEERNI---------------------------KLDAVKYSIIIDGLCKHGSLDN 281
Query: 383 ALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLG 442
A N+F E++ G + N T++ + + + G ++ ++K + L+
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 443 MYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKP 498
+ K G + EA ++ + + + D +++ ++I G+ + +A + + M + G P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 499 DEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDL 558
+ T +++ A ID G E F M+ V + Y +I G+L A++L
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSL-RGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 559 MRNM---PFEPPAASWGALLGASRIHGNTELGEKAAEMVFKME 598
+ M P ++ LL +G + EKA E+ K+E
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGES---EKALEIFEKIE 500
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 156/383 (40%), Gaps = 28/383 (7%)
Query: 274 WTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNV 333
++ VS +VQ +L+ + NE+S+ F A RN+
Sbjct: 9 LSSQVSKFVQPRLLETGTLRIALINCPNELSF--------------CCERGFSAFSDRNL 54
Query: 334 SSWNTMITGY---GQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEI 390
S + +G + I R + P + ++ + S A+T Y+ L + ++
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
+ G + N T S ++ L L G+++K GYE + L+ G +
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 451 GEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGV 506
EA ++ + + E D+++ NT++ G G +A+++ + M G +P+ +T V
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 507 LSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEP 566
L+ +G E M ++ ++ + Y+ +ID L + G L+ A +L M +
Sbjct: 235 LNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 567 PAA---SWGALLGASRIHGNTELGEKAA-EMVFKMEPHNSGMYVLLSNLYAASGRWADAG 622
++ L+G G + G K +M+ + N + +L + + G+ +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 623 NMRSRM--RDVGVQKVTGYSWVE 643
+ M R + +T S ++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLID 376
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/570 (21%), Positives = 256/570 (44%), Gaps = 78/570 (13%)
Query: 71 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 122
D A+ +F M P S V +N ++S + +F L L ++M DL S+N++
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 123 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQM----P 174
+ + R +L A + M + D+V+ +++L+GY EA + QM
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 175 HKNAISWNGLLAAYVHNGRIEEACRLFDSK----SDWELISWNCLMGGFVKRKMLGAARK 230
N +++N L+ + + EA L D +L ++ ++ G KR + A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 231 LFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYV 282
L KM DVV + T+I +++ A NLF + ++ +V T+ +++
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 283 QNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS---- 334
G +A M ++ N ++++A++ +V+ K+ A +L++ M R++
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEI 390
+++++I G+ + + +A+ +F++M +DC V++ +I G+ + EE + +F E+
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 391 KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSI 450
+ G N T++ + ++ ++I ++V G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP------------------ 463
Query: 451 GEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
D+++++ ++ G ++G ++AL+VFE ++ ++PD T ++
Sbjct: 464 -------------DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 511 SHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PP 567
AG ++ G + F S++ V P+ YT MI R G EEA L R M + P
Sbjct: 511 CKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 568 AASWGALLGASRIHGNTELGEKAAEMVFKM 597
+ ++ L+ A G+ +AE++ +M
Sbjct: 570 SGTYNTLIRARLRDGDK---AASAELIKEM 596
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 172/358 (48%), Gaps = 36/358 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
+ D++ + +I + + AL +F M R + V+YN++I R+S A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 107 LFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L M +R ++V+++ ++ +V+ +L +A +L+D M ++ D+ +++++++G+
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI---- 210
+ DEA+ +F M K N +++N L+ + R+EE LF S L+
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD-- 264
++N L+ G + A+K+F KM D+++++ ++ G + G + +A +F+
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
D++T+ M+ G + G +++ F + K N I Y M++G+ +
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 319 DMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIIS 372
+ A LF M N ++NT+I ++GD A + +L M V A+ IS
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 228/492 (46%), Gaps = 41/492 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
P + N V+ + + A V+ TM + +++N M+ + +
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 108 FDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQ 159
+ +M +R++ V++N+++ G+ +N ++ +ARR M + S+N ++ GY +
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 160 NGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 215
G D+A V +M + ++N + A GRI++A L S + +++S+N L
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTL 380
Query: 216 MGGFVKRKMLGAARKLFDKMHVRD----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQ-- 269
M G++K A LFD + D +V++NT+I G + G++ A+ L ++ Q
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 270 --DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARE 323
DV T+T +V G+V+NG L A +D+M +K + +Y G ++ D A
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 324 LFEAMPSR-----NVSSWNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAIISGY 374
L E M + +++ +N I G + G++ +A RK+F + D V++ +I GY
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
+ G ++ A N++ E+ R + T+ + A LE Q ++ K G
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFES 490
NALL K G+I EA +EE+ + S+ +I+ ++ + +++
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
Query: 491 MKTIGVKPDEIT 502
M ++PD T
Sbjct: 681 MLDKEIEPDGYT 692
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 199/467 (42%), Gaps = 47/467 (10%)
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNL-- 262
+I++N ++ K L K++ +M R++ V++N +I+G++++G M +A+
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 263 ------FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGY 312
F +P +++ ++ GY + G+ D+A D+M +YN +
Sbjct: 298 DMRRSGFAVTP----YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 313 VQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWA 368
++D AREL +M + +V S+NT++ GY + G +A LFD + D V++
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+I G ++G+ E A + E+ + T++ + L + +++ ++++
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE--------KDVVSWNTMIAGYARHGF 480
G + G A +G+++ F EE D+ +N I G + G
Sbjct: 474 GIKPD---GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 481 GKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYT 540
+A+ + +G+ PD +T V+ G + M + + PS Y
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-RLYPSVITYF 589
Query: 541 CMIDLLGRAGRLEEA---QDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
+I +AGRLE+A M+ P + ALL GN ++A + KM
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI---DEAYRYLCKM 646
Query: 598 E----PHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVTGYS 640
E P N Y +L + +W + + M D ++ GY+
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP-DGYT 692
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 201/393 (51%), Gaps = 37/393 (9%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P ++ ++KV+S ++ + D + +F+ M SYN +I+ R +RF +A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 108 FDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQ 159
KM + D+V+ + ++ G+ + R+ DA L M + DVV +N ++ G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----IS 211
G ++A E+F +M +A+++N L+A +GR +A RL ++ I+
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD--- 264
+ ++ FVK A KL+++M R DV ++N++I+G G + +AK + D
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 265 -QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
+ DV T+ +++G+ ++ +DE F +M Q+ + I+YN ++ GY Q+ + D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 320 MARELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGY 374
A+E+F M SR N+ +++ ++ G N + +A LF+ M + D ++ +I G
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
+ G+ E+A ++F + G + +++ +S
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 219/509 (43%), Gaps = 101/509 (19%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
W + ST + + + + +F M P S V ++ ++S ++ + L LF M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 113 Q----RDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYAD 164
DL S+N+++ R R A + M + DVV+ +++++G+ Q
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 165 EAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKM 224
+A ++ +M +++ +N ++ G K +
Sbjct: 157 DAIDLVSKMEEMGFRP---------------------------DVVIYNTIIDGSCKIGL 189
Query: 225 LGAARKLFDKMH---VR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD----VFTWTA 276
+ A +LFD+M VR D V++N++++G G S A L +D V T+TA
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 277 MVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR- 331
++ +V+ G EA +++M ++ + +YN+++ G ++D A+++ + M ++
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 332 ---NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEAL 384
+V ++NT+I G+ ++ + + KLF M QR D +++ II GY Q G + A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
+F R N T+S L +G L M
Sbjct: 370 EIF---SRMDSRPNIRTYSILL---------------YG-----------------LCMN 394
Query: 445 FKCGSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 500
++ + +A +FE ++ E D+ ++N +I G + G + A +F S+ G+KPD
Sbjct: 395 WR---VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 501 ITMVGVLSACSHAGLIDRGTEYFYSMNKD 529
++ ++S D+ + M +D
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
Query: 304 SYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMM 359
SYN ++ + ++ +A + M +V + +++I G+ Q + A L M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 360 PQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAAL 415
+ D V + II G + G +A+ +F ++RDG + T++ ++
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 416 ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTM 471
++ +V A++ ++ K G EA ++E + + DV ++N++
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 472 IAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS 531
I G HG +A + + M T G PD +T +++ + +D GT+ F M +
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RG 344
Query: 532 VTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALL 575
+ + Y +I +AGR + AQ++ M P ++ LL
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 128/288 (44%), Gaps = 9/288 (3%)
Query: 354 KLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
K+ P V ++ ++S A++ +Y+ +++F ++ G + +++ ++ +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWN 469
+ + G+++K GYE ++L+ + + + +A D+ +EE DVV +N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 470 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 529
T+I G + G A+ +F+ M+ GV+ D +T +++ +G M
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM- 237
Query: 530 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTEL 586
+ P+ +T +ID+ + G+ EA L M +P ++ +L+ +HG +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 587 GEKAAE-MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
++ + MV K + Y L N + S R + + M G+
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/577 (22%), Positives = 259/577 (44%), Gaps = 81/577 (14%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
+ V+ +G D A + M R + V Y +I +L+N+RF A + +M
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 113 QR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ----- 159
++ D+ +N ++ G + +R+ +AR M + + ++ A +SGY +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 160 --NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWN 213
+ Y E RE +P+K + GL+ Y G++ EAC + S D ++ ++
Sbjct: 540 SADKYVKEMRECGV-LPNK--VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFT 273
LM G K + A ++F +M + + +P DVF+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGI-------------------------AP--DVFS 629
Query: 274 WTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP 329
+ +++G+ + G + +A + FD+M ++ N I YN ++ G+ +S +++ A+EL + M
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 330 SR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYE 381
+ N ++ T+I GY ++GD+A+A +LFD M + D + ++ G + E
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 382 EALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE----TGCFVG 437
A+ +F K+ G + + + F+ ++ EL ++ +++ ++
Sbjct: 750 RAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 438 NALLGMYFKCGSIGEANDVFEGIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKT 493
N ++ K G++ A ++F ++ + V+++ +++ GY + G + VF+
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 494 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKH--YTCMIDLLG--RA 549
G++PD I +++A G+ + M +V K TC L G +
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 550 GRLEEAQDLMRNM---PFEPPAASWGALLGASRIHGN 583
G +E A+ +M NM + P +A+ L+ S I N
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 141/696 (20%), Positives = 284/696 (40%), Gaps = 134/696 (19%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRV-FNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKM 111
D+ ++ +I H R G+ V F T + + N + G L+ + + L +
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN--VDGALKLKESMICKGL---V 274
Query: 112 PQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQNGYADEAR 167
P + +++V++ G + +RL DA+ L M V +++ ++ G + AD A+
Sbjct: 275 PLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 168 EVFYQM-PHKNAIS---WNGLLAAYVHNGRIEEACRLFDSKSDWELI----SWNCLMGGF 219
+ ++M H I ++ + G +E+A LFD LI ++ L+ G+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 220 VKRKMLGAARKLFDKMHVRDVV----SWNTMISGYAQDGDMSQAKNLF------------ 263
+ K + +L +M R++V ++ T++ G GD+ A N+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 264 ---------------------------DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQ 296
+Q D+F + +++ G + +DEAR+F +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 297 MPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITG----YGQNGD 348
M + N +Y A ++GY+++++ A + + M V + TG Y + G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 349 IAQA----RKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
+ +A R + D D ++ +++G + ++A +F E++ G + + ++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK- 463
++ + + ++ I ++V+ G + N LLG + + G I +A ++ + + K
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 464 ---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
+ V++ T+I GY + G +A +F+ MK G+ PD ++ C ++R
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 521 EYFYSMNK-------------------------------------DYSVTPSSKHYTCMI 543
F + K D P+ Y MI
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 544 DLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEM--VFK-- 596
D L + G LE A++L M+N P ++ +LL +G ++G + AEM VF
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL-----NGYDKMGRR-AEMFPVFDEA 866
Query: 597 ----MEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
+EP + MY ++ N + G A + +M
Sbjct: 867 IAAGIEPDHI-MYSVIINAFLKEGMTTKALVLVDQM 901
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 131/617 (21%), Positives = 248/617 (40%), Gaps = 87/617 (14%)
Query: 146 DVVSWNAMLSGYAQNGYADEAREVFYQ------MPHKN--------AISWNGL-LAAYVH 190
D V + + GY GY +EA VF +P + + WN L L V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 191 NGRIEEACRLFDSKSDWELISWNCLMGG--------FVKRKM-------LGAARKLFDKM 235
G +E +FD K+ LI +C G F K + A KL + M
Sbjct: 210 KGMVERNV-VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268
Query: 236 HVRDVV----SWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGML 287
+ +V +++ +I G + + AK+L + D T++ ++ G ++
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 288 DEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNV----SSWNTM 339
D A+ +M Y+ + + M+ A+ LF+ M + + ++ ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDGE 395
I GY + ++ Q +L M +R+ V ++ ++ G +G + A N+ E+ G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 396 SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAND 455
N ++ + T + ++ ++ + G F N+L+ K + EA
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 456 -VFEGIE---EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+ E +E + + ++ I+GY A + M+ GV P+++ G+++
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEPPA 568
G + + SM D + +K YT +++ L + ++++A+++ R M P
Sbjct: 569 KKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 569 ASWGALLGASRIHGNTELG--EKAA----EMVFKMEPHNSGMYVLLSNLYAASGRWADAG 622
S+G L I+G ++LG +KA+ EMV + N +Y +L + SG A
Sbjct: 628 FSYGVL-----INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 623 NMRSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAF--LEELDLKMRREGY 680
+ M G+ N + T+ D + D AF +E+ LK
Sbjct: 683 ELLDEMSVKGLH----------PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 681 VSSTKLV-----LHDVE 692
T LV L+DVE
Sbjct: 733 FVYTTLVDGCCRLNDVE 749
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 244/541 (45%), Gaps = 67/541 (12%)
Query: 60 VISTHMRNGHCDSALRVFNTM-----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR 114
VI T+ +N D AL VF M + SYN +++ ++ ++ LF
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 115 ----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEA 166
+L ++NV++ + + AR D M ++ DV S++ +++ A+ G D+A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 167 REVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLG 226
E+F +M + ++ +N L+ GF+K K
Sbjct: 204 LELFDEMSERGVAP---------------------------DVTCYNILIDGFLKEKDHK 236
Query: 227 AARKLFDKMH-----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAM 277
A +L+D++ +V + N MISG ++ G + ++++ +D++T++++
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 278 VSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMP---S 330
+ G G +D+A + F+++ ++ + ++YN M+ G+ + K+ + EL+ M S
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS 356
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNM 386
N+ S+N +I G +NG I +A ++ +MP + D ++ I G G+ +AL +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
E++ G L+ ++ + LE + ++ K G E V NAL+G +
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 447 CGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHG-FGKQALMVFESMKTIGVKPDEI 501
+GEA+ + + VVS+N +I G + G FG+ + V E ++ G KPD
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLK 535
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
T +L ID E ++ + T H +I L G+L++A +M N
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH-NILIHGLCSVGKLDDAMTVMAN 594
Query: 562 M 562
M
Sbjct: 595 M 595
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/526 (21%), Positives = 239/526 (45%), Gaps = 76/526 (14%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
PD+ ++ VI+ + G D AL +F+ M R YN +I G+L+ A +L
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 108 FDKMPQRDLV-----SWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYA 158
+D++ + V + N+M++G + R+ D ++++ M Q KD+ ++++++ G
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 159 QNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGRIEEAC---RLFDSKSDWELIS 211
G D+A VF ++ + A +++N +L + G+I+E+ R+ + K+ ++S
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS 361
Query: 212 WNCLMGGFVKRKMLGAA----RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
+N L+ G ++ + A R + K + D ++ I G +G +++A + +
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 268 ----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
H DV+ + +++ + L+EA +M + N NA++ G ++ +++
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 320 MARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
A M G+NG + VS+ +I G + G
Sbjct: 482 EASFFLREM---------------GKNG------------CRPTVVSYNILICGLCKAGK 514
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
+ EA E+ +G + T+S L ++L ++ Q +++G ET + N
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
L+ G + +A V +E ++ +V++NT++ G+ + G +A +++ M +G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 496 VKPDEI---TMVGVLSACSHAGLIDRGTEY---FYSMNKDYSVTPS 535
++PD I T++ L C RG Y F+ +++ + P+
Sbjct: 635 LQPDIISYNTIMKGLCMC-------RGVSYAMEFFDDARNHGIFPT 673
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 43/218 (19%)
Query: 82 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARR 137
R + VSYN +I G + +F A +M + DL +++++L G R+R++ A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 138 LFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGR 193
L+ Q DV+ N ++ G G D+A V M H+N +
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA------------- 602
Query: 194 IEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISG 249
L+++N LM GF K A ++ M+ D++S+NT++ G
Sbjct: 603 --------------NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Query: 250 YAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQ 283
+S A FD + + +F TW +V V
Sbjct: 649 LCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 81/112 (72%)
Query: 660 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAG 719
++ + Y L+ L ++R GYV TK VLHD++EE KE L +HSE+LA+AFGI+ P G
Sbjct: 128 DRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPG 187
Query: 720 RPIRVIKNLRVCEDCHNAIKHISKIVGRLIILRDSHRFHHFNEGICSCGDYW 771
IRV+KNLR+C DCHN IK +S I R II+RD+ RFHHF +G CSCGDYW
Sbjct: 188 TTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 204/455 (44%), Gaps = 75/455 (16%)
Query: 85 SVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFD 140
+ ++N +I G + S A L D+M Q D+V++N ++ G R+ A L
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 141 SMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNG 192
M ++ DV +++ ++ ++G D A +F +M K + +++N L+ G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 193 RIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWN 244
+ + L E+ I++N L+ FVK L A +L+ +M R +++++N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 245 TMISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
T++ GY +S+A N+ D D+ T+T+++ GY +D+ F + ++
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 301 ----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQA 352
N ++Y+ +V G+ QS K+ +A ELF+ M S +V ++ ++ G NG + +A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 353 RKLFDMMPQRD----CVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 408
++F+ + + V + II G + G E+A N+F + G N T++ +S
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS- 516
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KD 464
G+ K GS+ EAN + +EE +
Sbjct: 517 ---------------------------------GLCKK-GSLSEANILLRKMEEDGNAPN 542
Query: 465 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
++NT+I + R G + + E MK+ G D
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 185/394 (46%), Gaps = 42/394 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARD 106
+PD +N +I G A+ + + M V+YN++++G R+ SLA D
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 107 LFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L KM +R D+ +++ ++ R+ + A LF M K VV++N+++ G
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELI 210
+ G ++ + M + N I++N LL +V G+++EA L+ +I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR-----DVVSWNTMISGYAQ----DGDMSQAKN 261
++N LM G+ + L A + D M VR D+V++ ++I GY D M +N
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNK 317
+ + + T++ +V G+ Q+G + A F +M + ++Y ++ G + K
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 318 MDMARELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAA 369
++ A E+FE + + + T+I G + G + A LF +P + + +++
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+ISG + G EA + +++ DG + N T++
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/539 (20%), Positives = 228/539 (42%), Gaps = 67/539 (12%)
Query: 71 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVM 122
D A+ +F M P S V ++ S R +F+L D ++ ++ + N+M
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 123 LTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA 178
+ + R + A + + + D ++N ++ G G EA + +M
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM----- 184
Query: 179 ISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVR 238
+E C+ +++++N ++ G + A L KM R
Sbjct: 185 ---------------VENGCQ-------PDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 239 ----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEA 290
DV +++T+I +DG + A +LF + + V T+ ++V G + G ++
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Query: 291 RTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITG 342
M + N I++N ++ +V+ K+ A EL++ M +R N+ ++NT++ G
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 343 YGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLN 398
Y +++A + D+M + C V++ ++I GY ++ + +F I + G N
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 399 RSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFE 458
T+S + ++L +++ ++V G LL G + +A ++FE
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 459 GIEEKD----VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
+++ +V + T+I G + G + A +F S+ GVKP+ +T ++S G
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAAS 570
+ M +D + P+ Y +I R G L + L+ M F A+S
Sbjct: 523 SLSEANILLRKMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 9/297 (3%)
Query: 340 ITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
I ++ IA +++ P V ++ S A+T + L+ +++ +G + N
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
T + ++ + G+V+K GYE N L+ F G + EA + +
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 460 IEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGL 515
+ E DVV++N+++ G R G AL + M+ VK D T ++ + G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 516 IDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEPPAASWG 572
ID F M + + S Y ++ L +AG+ + L+++M P ++
Sbjct: 244 IDAAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 573 ALLGASRIHGN-TELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
LL G E E EM+ + N Y L + Y R ++A NM M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 226/511 (44%), Gaps = 79/511 (15%)
Query: 88 YNAMISGYLRNARFSLARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDAR----RLF 139
YNA+I + +F A LFD+M + L V++++++ + R +L A +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 140 DSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIE 195
D+ + V +N++++G+ + G A +M +K +++ L+ Y G+I
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 196 EACRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMI 247
+A RL+ + + ++ L+ G + ++ A KLF++M +V V++N MI
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 248 SGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQ 299
GY ++GDMS+A K + ++ D +++ ++ G G EA+ F D + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS------------------------- 334
NEI Y ++ G+ + K++ A + + M R V
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 335 --------------SWNTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQ 376
+ +MI + GD +A ++D+M CV ++ A+I+G +
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 377 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAA-LELGKQIHGQVVKTGYETGCF 435
G EA + +++ N+ T+ C L ++ ++H ++K G
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTA 788
Query: 436 VGNALLGMYFKCGSIGEANDVF-----EGIEEKDVVSWNTMIAGYARHGFGKQALMVFES 490
N L+ + + G I EA+++ +G+ D +++ TMI R K+A+ ++ S
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVS-PDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 491 MKTIGVKPDEITMVGVLSACSHAGLIDRGTE 521
M G++PD + ++ C AG + + TE
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/568 (20%), Positives = 221/568 (38%), Gaps = 125/568 (22%)
Query: 101 FSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLS 155
F++ ++K S+++++ YVR+RR+ D +F M K +V + +A+L
Sbjct: 141 FNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH 200
Query: 156 GYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFD------------- 202
G + + A E+F M +S Y++ G I C L D
Sbjct: 201 GLVKFRHFGLAMELFNDM-----VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 203 SKSDWELISWNCLMGGFVKRK----MLGAARKLFDKMHVRDVVSWNTMISGYA------- 251
+ D ++ +N L+ G K++ +G + L K DVV++ T++ G
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 252 ----------------------------QDGDMSQAKNL------FDQSPHQDVFTWTAM 277
+ G + +A NL F SP ++F + A+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP--NLFVYNAL 373
Query: 278 VSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMAR----ELFEAMP 329
+ + EA FD+M + N+++Y+ ++ + + K+D A E+ +
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWAAIISGYAQTGHYEEALN 385
+V +N++I G+ + GDI+ A M + V++ +++ GY G +AL
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 386 MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYF 445
++ E+ G + + TF+ LL F
Sbjct: 494 LYHEMTGKGIAPSIYTFT-----------------------------------TLLSGLF 518
Query: 446 KCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
+ G I +A +F + E +V V++N MI GY G +A + M G+ PD
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 502 TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRN 561
+ ++ G + ++K + + YT ++ R G+LEEA + +
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKG-NCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 562 MP---FEPPAASWGALLGASRIHGNTEL 586
M + +G L+ S H + +L
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/518 (20%), Positives = 196/518 (37%), Gaps = 98/518 (18%)
Query: 181 WNGLLAAYVHNGRIEEACRLFD---SKSDW--ELISWNCLMGGFVKRKMLGAARKLFDKM 235
++ L+ YV + R+ + +F +K E+ + + L+ G VK + G A +LF+
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFN-- 216
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFD 295
D+VS DV+ +T ++ + L A+
Sbjct: 217 ---DMVSVGI----------------------RPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 296 QMPQK----NEISYNAMVAGYVQSNKM----DMARELFEAMPSRNVSSWNTMITGYGQNG 347
M N + YN ++ G + K+ + ++L +V ++ T++ G +
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 348 DIAQARKLFD-MMPQRDCVSWAAI---ISGYAQTGHYEEALN------------------ 385
+ ++ D M+ R S AA+ + G + G EEALN
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 386 -----------------MFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+F + + G N T+S + L+ G++V T
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 429 GYETGCFVGNALLGMYFKCGSIGEAN----DVFEGIEEKDVVSWNTMIAGYARHGFGKQA 484
G + + N+L+ + K G I A ++ E VV++ +++ GY G +A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
L ++ M G+ P T +LS AGLI + F M +++V P+ Y MI+
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIE 550
Query: 545 LLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH- 600
G + +A + ++ M P S+ L IHG G+ + VF H
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL-----IHGLCLTGQASEAKVFVDGLHK 605
Query: 601 -----NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
N Y L + + G+ +A ++ M GV
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 179/354 (50%), Gaps = 24/354 (6%)
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGM-LDEARTFF 294
V +++ +IS Y + G +A ++F+ ++ T+ A++ + GM + FF
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 295 DQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQN 346
D+M Q + I++N+++A + + AR LF+ M +R +V S+NT++ +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 347 GDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTF 402
G + A ++ MP + + VS++ +I G+A+ G ++EALN+F E++ G +L+R ++
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
+ LS + E I ++ G + NALLG Y K G E VF ++
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 463 KDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 518
+ V ++++T+I GY++ G K+A+ +F K+ G++ D + ++ A GL+
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 519 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR--NMPFEPPAAS 570
M K+ ++P+ Y +ID GR+ ++ + D ++PF A S
Sbjct: 568 AVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALS 620
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 201/450 (44%), Gaps = 58/450 (12%)
Query: 120 NVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQMPH 175
+ M++ R ++ A+R+F++ V +++A++S Y ++G +EA VF M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 176 ----KNAISWNGLLAAYVHNG-RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLG 226
N +++N ++ A G ++ + FD + I++N L+ + +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 227 AARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMV 278
AAR LFD+M R DV S+NT++ + G M A + Q P + +V +++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 279 SGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNK----MDMARELFEAMPS 330
G+ + G DEA F +M + +SYN +++ Y + + +D+ RE+
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 331 RNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNM 386
++V ++N ++ GYG+ G + +K+F M + + ++++ +I GY++ G Y+EA+ +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 387 FIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFK 446
F E K G + +S + + + ++ K G N+++ + +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 447 CGSIGEANDVFEG---------------IEEKDVVSWNTMIAGYARHGFGKQA------- 484
++ + D G E V+ + + + K
Sbjct: 597 SATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQEL 656
Query: 485 ---LMVFESMKTIGVKPDEITMVGVLSACS 511
L VF M + +KP+ +T +L+ACS
Sbjct: 657 SCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 200/441 (45%), Gaps = 51/441 (11%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNA-RFSLARDLFDKM 111
++ +IS + R+G + A+ VFN+M R + V+YNA+I + F FD+M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 112 P----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYA 163
Q D +++N +L R AR LFD M ++DV S+N +L + G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 164 DEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCL 215
D A E+ QMP K N +S++ ++ + GR +EA LF + +S+N L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 216 MGGFVK----RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDV 271
+ + K + L R++ +DVV++N ++ GY + G + K +F + + V
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 272 ----FTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARE 323
T++ ++ GY + G+ EA F + + + + Y+A++ ++ + A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 324 LFEAMP----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGH 379
L + M S NV ++N++I +G++ + ++ + + S A +
Sbjct: 571 LIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN--------GGSLPFSSSALSAL 622
Query: 380 YEEALNMFIEI--KRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
E N I++ + ES NR+T C LE+ +++H +K T
Sbjct: 623 TETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT----F 678
Query: 438 NALLGMYFKCGSIGEANDVFE 458
+A+L +C S +A+ + E
Sbjct: 679 SAILNACSRCNSFEDASMLLE 699
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 180/393 (45%), Gaps = 80/393 (20%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
PD + +N +++ R G ++A +F+ M R SYN ++ + + LA ++
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQ 159
+MP + ++VS++ ++ G+ + R +A LF M D VS+N +LS Y +
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 160 NGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 215
G ++EA ++ +M K+ +++N LL Y G+ +E ++F
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE------------ 504
Query: 216 MGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDV 271
+KR+ + + ++++++T+I GY++ G +A +F + DV
Sbjct: 505 ----MKREHV-----------LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL--- 324
++A++ +NG++ A + D+M ++ N ++YN+++ + +S MD + +
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG 609
Query: 325 ------FEAMPSRNVSSWNTMITGYGQ---------NGDIAQA-----------RKLFDM 358
A+ + + N +I +GQ D + RK+ +
Sbjct: 610 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQL 669
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIK 391
+ + V+++AI++ ++ +E+A + E++
Sbjct: 670 EIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARD 106
+ D+ +N ++ + G D A + MP + + VSY+ +I G+ + RF A +
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 107 LFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYA 158
LF +M D VS+N +L+ Y + R +A + M +KDVV++NA+L GY
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLF-DSKS---DWELI 210
+ G DE ++VF +M + N ++++ L+ Y G +EA +F + KS +++
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKN 261
++ L+ K ++G+A L D+M +VV++N++I + + M ++ +
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 436 VGNALLGMYFKCGSIGEANDVFE----GIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
+ +A++ + G + A +FE G V +++ +I+ Y R G ++A+ VF SM
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 551
K G++P+ +T V+ AC G+ + F+ + V P + ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 552 LEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELG-EKAAEMVFKMEPHNSGMYVL 607
E A++L M N E S+ LL A G +L E A+M K N Y
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 608 LSNLYAASGRWADAGNMRSRMRDVGV 633
+ + +A +GR+ +A N+ MR +G+
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGI 440
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 10/242 (4%)
Query: 403 SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE 462
S +ST + + K+I GY + +AL+ Y + G EA VF ++E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 463 ----KDVVSWNTMIAGYARHGFG-KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLID 517
++V++N +I + G KQ F+ M+ GV+PD IT +L+ CS GL +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 518 RGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFE---PPAASWGAL 574
F M + + Y ++D + + G+++ A +++ MP + P S+ +
Sbjct: 357 AARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 575 L-GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
+ G ++ E EM + + Y L ++Y GR +A ++ M VG+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 634 QK 635
+K
Sbjct: 476 KK 477
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/585 (21%), Positives = 256/585 (43%), Gaps = 80/585 (13%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP 112
+ K+ + + D A+ +F M P S V ++ ++S + +F L L ++M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 113 Q----RDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYAD 164
+L ++++++ + R +L A + M + D+V+ N++L+G+
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 165 EAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWNCLM 216
+A + QM ++ ++N L+ + R EA L D +L+++ ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 217 GGFVKRKMLGAARKLFDKMHVRD----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQ--- 269
G KR + A L KM VV +NT+I +++ A NLF + ++
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 270 -DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAREL 324
+V T+ +++ G +A M ++ N ++++A++ +V+ K+ A +L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 325 FEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQ 376
++ M R++ +++++I G+ + + +A+ +F++M +DC V++ +I G+ +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 377 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
+E + +F E+ + G N T++ IHG
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYT---------------TLIHG------------- 440
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMK 492
+F+ A VF+ + D+++++ ++ G +G + AL+VFE ++
Sbjct: 441 -------FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
++PD T ++ AG ++ G + F S++ V P+ YT M+ R G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLK 552
Query: 553 EEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKM 597
EEA L R M E P G R H +AE++ +M
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 173/350 (49%), Gaps = 38/350 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
+P ++ +N +I + + AL +F M R + V+YN++I R+S A
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 107 LFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L M +R ++V+++ ++ +V+ +L +A +L+D M ++ D+ +++++++G+
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI---- 210
+ DEA+ +F M K N +++N L+ + R++E LF S L+
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFD-- 264
++ L+ GF + + A+ +F +M + D+++++ ++ G +G + A +F+
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
D++T+ M+ G + G +++ F + K N ++Y M++G+ +
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 319 DMARELFEAM----PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC 364
+ A LF M P + ++NT+I + ++GD A + +L M R C
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 600
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 141/642 (21%), Positives = 280/642 (43%), Gaps = 65/642 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARD 106
D D+ K+ ++ R G D AL +F + V S M++ + + R L D
Sbjct: 145 DADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD 202
Query: 107 LFDKMPQRDLVSWNVMLTGYVRN---------RRLGDARRLFDSMPQKDVVSWNAMLSGY 157
FDK+ + + V G+V + + L R + + + +VS N +L G
Sbjct: 203 HFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 158 AQNGYADEAREVFYQM---PHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELI 210
+ + +R + + P N +++ L+ + G ++ A LF + +LI
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQA----KNL 262
+++ L+ G+ K MLG KLF + + DVV +++ I Y + GD++ A K +
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
Q +V T+T ++ G Q+G + EA + Q+ ++ + ++Y++++ G+ + +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 319 DMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKL-FDMMPQR---DCVSWAAI 370
L+E M +V + ++ G + G + A + M+ Q + V + ++
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST-------CADIAALELGKQIHG 423
I G+ + ++EAL +F + G + +TF+ + C + +G Q+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFD 561
Query: 424 QVVKTGYETGCFVGNALLGMYFKCGSIGEA----NDVFEGIEEKDVVSWNTMIAGYARHG 479
+ + V N ++ + FKC I +A N++ EG E D+V++NTMI GY
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 480 FGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHY 539
+A +FE +K P+ +T+ ++ +D G +S+ + P++ Y
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD-GAIRMFSIMAEKGSKPNAVTY 680
Query: 540 TCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGA----SRIHGNTELGEKAAE 592
C++D ++ +E + L M P S+ ++ R+ T + +A +
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Query: 593 MVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
K+ P + Y +L Y GR +A + M GV+
Sbjct: 741 A--KLLP-DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 219/507 (43%), Gaps = 81/507 (15%)
Query: 76 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRR 131
V + P + V++ +I+G+ + A DLF M QR DL++++ ++ GY +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 132 LGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNG 183
LG +LF K DVV +++ + Y ++G A V+ +M + N +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 184 LLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM---- 235
L+ +GRI EA ++ + +++++ L+ GF K L + L++ M
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAK----NLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 291
+ DVV + ++ G ++ G M A + QS +V + +++ G+ + DEA
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 292 TFFDQMP----------------------------------------QKNEISYNAMVAG 311
F M Q+N+IS + V
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 312 YV-----QSNKMDMARELF----EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR 362
V + ++++ A + F E ++ ++NTMI GY + +A ++F+++
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 363 ----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
+ V+ +I + + A+ MF + G N T+ C + + +E
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVF-EGIEEK---DVVSWNTMIAG 474
++ ++ + G + ++ K G + EA ++F + I+ K DVV++ +I G
Sbjct: 697 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEI 501
Y + G +A +++E M GVKPD++
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 207/458 (45%), Gaps = 75/458 (16%)
Query: 85 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFD 140
+V +N +++G R S A +L D+M + L++ N ++ G N ++ DA L D
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 141 SMP----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKN----AISWNGLLAAYVHNG 192
M Q + V++ +L+ ++G A E+ +M +N A+ ++ ++ +G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 193 RIEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWN 244
++ A LF+ ++I++N L+GGF KL M R +VV+++
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDV----FTWTAMVSGYVQNGMLDEARTFFDQMPQK 300
+I + ++G + +A L + + + T+ +++ G+ + L+EA D M K
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 301 ----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQA 352
+ +++N ++ GY ++N++D ELF M R N ++NT++ G+ Q+G + A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 353 RKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALST 408
+KLF M R D VS+ ++ G G E+AL +F +I++ L+ +
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII--- 514
Query: 409 CADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----D 464
IHG NA + +A D+F + K D
Sbjct: 515 ------------IHGMC------------NA--------SKVDDAWDLFCSLPLKGVKLD 542
Query: 465 VVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
++N MI+ R +A ++F M G PDE+T
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 192/397 (48%), Gaps = 40/397 (10%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
+PD + +N +++ AL + + M + + ++ N +++G N + S A
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 107 LFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L D+M Q + V++ +L ++ + A L M ++ D V ++ ++ G
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELI 210
++G D A +F +M K + I++N L+ + + GR ++ +L K ++
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFD-- 264
+++ L+ FVK L A +L +M R + +++N++I G+ ++ + +A + D
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
+ D+ T+ +++GY + +D+ F +M + N ++YN +V G+ QS K+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 319 DMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAI 370
++A++LF+ M SR ++ S+ ++ G NG++ +A ++F + + D + I
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALS 407
I G ++A ++F + G L+ ++ +S
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 218/505 (43%), Gaps = 62/505 (12%)
Query: 148 VSWNAMLSGYAQNGYADEAREVFYQM----PHKNAISWNGLLAAYVHNGRIE---EACRL 200
+S+ LS AD+A ++F M P I +N L +A + E C+
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 201 FDSKSDWELI-SWNCLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGD 255
+SK I + + ++ F + + L A K+ + D V +NT+++G +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 256 MSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNA 307
+S+A L D+ + T +V+G NG + +A D+M Q NE++Y
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 308 MVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 367
++ +S + +A EL M RN+ + D V +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNI---------------------------KLDAVKY 266
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
+ II G + G + A N+F E++ G + T++ + + + G ++ ++K
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQ 483
+ L+ + K G + EA+ + + + ++ + +++N++I G+ + ++
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
A+ + + M + G PD +T +++ A ID G E F M+ V ++ Y ++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL-RGVIANTVTYNTLV 445
Query: 544 DLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
++G+LE A+ L + M P S+ LL + N EL EKA E+ K+E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG--LCDNGEL-EKALEIFGKIEKS 502
Query: 601 ----NSGMYVLLSNLYAASGRWADA 621
+ G+Y+++ + + + DA
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDA 527
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 66/309 (21%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
P+++ ++ +I + ++ G A ++ M +R ++++YN++I G+ + R A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQ 159
D M + D++++N+++ GY + R+ D LF M + V V++N ++ G+ Q
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD------------- 202
+G + A+++F +M + + +S+ LL NG +E+A +F
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 203 -----------SKSD--WELI-------------SWNCLMGGFVKRKMLGAA----RKLF 232
SK D W+L ++N ++ ++ L A RK+
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 233 DKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLD 288
++ H D +++N +I + D D + A L ++ DV T MV + +G LD
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST-VKMVINMLSSGELD 629
Query: 289 EARTFFDQM 297
++F D +
Sbjct: 630 --KSFLDML 636
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 227/492 (46%), Gaps = 90/492 (18%)
Query: 63 THMRNGHC--DSALRVFNTMPRR-------SSVSYNAMISGYLRNARFSLARDLFDKM-- 111
T M N +C L F+ + R +++++ +++G+ R S A L D+M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 112 -PQR-DLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGYADE 165
QR DLV+ + ++ G R+ +A L D M Q D V++ +L+ ++G +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 166 AREVFYQMPHKN----AISWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMG 217
A ++F +M +N + ++ ++ + +G ++A LF+ ++++++ L+G
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 218 GFVK-------RKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ- 269
G KML R++ + + DVV+++ +I + ++G + +AK L+++ +
Sbjct: 289 GLCNDGKWDDGAKML---REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 270 ---DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMAR 322
D T+ +++ G+ + L EA FD M K + ++Y+ ++ Y ++ ++D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 323 ELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGY 374
LF + S+ N ++NT++ G+ Q+G + A++LF M R V++ ++ G
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 375 AQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGC 434
G +AL +F ++++ +L ++ IHG
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNII---------------IHGMC--------- 501
Query: 435 FVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFES 490
NA + +A +F + +K DVV++N MI G + G +A M+F
Sbjct: 502 ---NA--------SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 491 MKTIGVKPDEIT 502
MK G PD+ T
Sbjct: 551 MKEDGCTPDDFT 562
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/542 (21%), Positives = 238/542 (43%), Gaps = 50/542 (9%)
Query: 64 HMRNGHCD----SALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMP--- 112
+RNG D A+ +F +M P + + +N + S R ++ L M
Sbjct: 41 RLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 113 -QRDLVSWNVMLTGYVRNRRLGDARRLFDSM----PQKDVVSWNAMLSGYAQNGYADEAR 167
+ D+ + +M+ Y R ++L A + + D ++++ +++G+ G EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 168 EVFYQM----PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNCLMGGF 219
+ +M + ++ + L+ GR+ EA L D ++ + +++ ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 220 VKRKMLGAARKLFDKMHVRD----VVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DV 271
K A LF KM R+ VV ++ +I +DG A +LF++ + DV
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQKNEI----SYNAMVAGYVQSNKMDMARELFEA 327
T+++++ G +G D+ +M +N I +++A++ +V+ K+ A+EL+
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 328 MPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGH 379
M +R ++ ++N++I G+ + + +A ++FD+M + C V+++ +I+ Y +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
++ + +F EI G N T++ + L K++ ++V G
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 440 LLGMYFKCGSIGEANDVFEGIEEKDVV----SWNTMIAGYARHGFGKQALMVFESMKTIG 495
LL G + +A ++FE +++ + +N +I G A +F S+ G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDL-LGRAGRLEE 554
VKPD +T ++ G + F M +D TP Y +I LG +G +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNILIRAHLGGSGLISS 579
Query: 555 AQ 556
+
Sbjct: 580 VE 581
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 224/496 (45%), Gaps = 98/496 (19%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDL 107
PDL+ + +I+ G AL + + M + V+Y +++ ++ +LA DL
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 108 FDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
F KM +R++ V +++++ ++ DA LF+ M K DVV++++++ G
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 160 NGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGF 219
+G D+ ++ +M +N I ++++++ L+ F
Sbjct: 293 DGKWDDGAKMLREMIGRNIIP---------------------------DVVTFSALIDVF 325
Query: 220 VKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD----QSPHQDV 271
VK L A++L+++M R D +++N++I G+ ++ + +A +FD + D+
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEA 327
T++ +++ Y + +D+ F ++ K N I+YN +V G+ QS K++ A+ELF+
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 328 MPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGH 379
M SR +V ++ ++ G NG++ +A ++F+ M + + II G
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
++A ++F C+LS K + VV N
Sbjct: 506 VDDAWSLF----------------CSLSD----------KGVKPDVVTY---------NV 530
Query: 440 LLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
++G K GS+ EA+ +F ++E D ++N +I + ++ + E MK G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 496 VKPDEITMVGVLSACS 511
D T+ V+ S
Sbjct: 591 FSADSSTIKMVIDMLS 606
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/446 (18%), Positives = 176/446 (39%), Gaps = 112/446 (25%)
Query: 239 DVVSWNTMISGYAQDGDMSQAKNLFDQ----SPHQDVFTWTAMVSGYVQNGMLDEARTFF 294
D ++++T+++G+ +G +S+A L D+ D+ T + +++G G + EA
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 295 DQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIA 350
D+M Q +E++Y ++ +S +A +LF M RN+ +
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA--------------- 243
Query: 351 QARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCA 410
V ++ +I + G +++AL++F E++ G + T+S +
Sbjct: 244 ------------SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 411 DIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNT 470
+ + G ++ +++ G ++ DVV+++
Sbjct: 292 NDGKWDDGAKMLREMI----------GRNII---------------------PDVVTFSA 320
Query: 471 MIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSA-----CSH------------- 512
+I + + G +A ++ M T G+ PD IT ++ C H
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 513 -----------------AGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
A +D G F ++ + P++ Y ++ ++G+L A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 556 QDLMRNMP---FEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNS----GMYVLL 608
++L + M P ++G LL + N EL KA E+ KM+ G+Y ++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDG--LCDNGEL-NKALEIFEKMQKSRMTLGIGIYNII 496
Query: 609 SNLYAASGRWADAGNMRSRMRDVGVQ 634
+ + + DA ++ + D GV+
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVK 522
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 17/322 (5%)
Query: 349 IAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC 404
+ A LF+ M P + + + S A+T Y+ L ++ +G + T +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 405 ALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA----NDVFEGI 460
++ L + G+ K GYE + L+ + G + EA + + E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 461 EEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGT 520
+ D+V+ +T+I G G +AL++ + M G +PDE+T VL+ +G
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 521 EYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAA---SWGALLGA 577
+ F M ++ ++ S Y+ +ID L + G ++A L M + A ++ +L+G
Sbjct: 231 DLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 578 SRIHGNTELGEKAA-EMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKV 636
G + G K EM+ + + + L +++ G+ +A + + M G+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 637 TGYSWVEVQNKIHKFTVGDCFH 658
T + + I F +C H
Sbjct: 350 T----ITYNSLIDGFCKENCLH 367
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/603 (21%), Positives = 264/603 (43%), Gaps = 70/603 (11%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
+PD++ N +I+T + D A ++F M + + V+YN +++G +N + A +
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 107 LFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYA 158
LF+ M Q+ + +++N + +N + A ++ M DV ++N ++ G
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 159 QNGYADEAREVFYQMP---HKNAISWNGLLAAYVHNGRIEEACR-----LFDSKSDWELI 210
+NG EA F+QM + + ++ LL V IE+A + L++ +
Sbjct: 655 KNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQD 270
W L+G + + A +++ + +G +DGD + H +
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERL----------VANGICRDGDSILVPIIRYSCKHNN 764
Query: 271 VFTWTAMVSGYVQNGMLDEARTFFDQMP-----QKNEISYNAMVAGYVQSNKMDMARELF 325
V SG ART F++ Q +YN ++ G ++++ +++A+++F
Sbjct: 765 V-------SG---------ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 326 EAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQT 377
+ S +V+++N ++ YG++G I + +L+ M +C ++ +ISG +
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 378 GHYEEALNMFIEIKRDGE-SLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
G+ ++AL+++ ++ D + S T+ + + L KQ+ ++ G C +
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 437 GNALLGMYFKCGSIGEANDVF-----EGIEEKDVVSWNTMIAGYARHGFGKQALMVFESM 491
N L+ + K G A +F EG+ D+ +++ ++ G + L F+ +
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRP-DLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 492 KTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGR 551
K G+ PD + +++ + ++ F M +TP Y +I LG AG
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 552 LEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAE-MVFKMEPHNSGMYVL 607
+EEA + ++ EP ++ AL+ + G E + MV N+G Y
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 608 LSN 610
L N
Sbjct: 1108 LPN 1110
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 147/637 (23%), Positives = 267/637 (41%), Gaps = 104/637 (16%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
PD + + ++ N DS + ++ M + V++ ++ + F A D
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 108 FDKMPQRDLV----SWNVMLTGYVRNRRLGDARRLFDSMPQKDV----VSWNAMLSGYAQ 159
D M + ++ ++N ++ G +R RL DA LF +M V ++ + Y +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----S 211
+G + A E F +M K N ++ N L + GR EA ++F D L+ +
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF---- 263
+N +M + K + A KL +M DV+ N++I+ + + +A +F
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
+ V T+ +++G +NG + EA F+ M QK N I++N + +++++
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 320 MA-RELFEAMP---SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ---RDCVSWAAIIS 372
+A + LF+ M +V ++NT+I G +NG + +A F M + D V+ ++
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP 685
Query: 373 GYAQTGHYEEAL---------------NMFIE--------------------------IK 391
G + E+A N+F E I
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 392 RDGESLNRST--FSCALSTCADIAAL--ELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
RDG+S+ +SC + + L + K + Q Y N L+G +
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY-------NLLIGGLLEA 798
Query: 448 GSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
I A DVF ++ DV ++N ++ Y + G + +++ M T + + IT
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM- 562
V+S AG +D + +Y + D +P++ Y +ID L ++GRL EA+ L M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 563 --PFEPPAASWGALLGASRIHGNTELGEK-AAEMVFK 596
P A + L I+G + GE AA +FK
Sbjct: 919 DYGCRPNCAIYNIL-----INGFGKAGEADAACALFK 950
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 201/463 (43%), Gaps = 34/463 (7%)
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQS 266
S+N L+ +K + A +++ +M + + ++++++ G + D+ L +
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 267 P----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
+V+T+T + + G ++EA +M + + ++Y ++ + K+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 319 DMARELFEAM------PSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQ----RDCVSWA 368
D A+E+FE M P R ++ T++ + N D+ ++ + M + D V++
Sbjct: 310 DCAKEVFEKMKTGRHKPDR--VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
++ + G++ EA + ++ G N T++ + + L+ ++ G +
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQA 484
G + + + Y K G A + FE ++ K ++V+ N + A+ G ++A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
+F +K IG+ PD +T ++ S G ID + M ++ P +I+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEPDVIVVNSLIN 546
Query: 545 LLGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAE-MVFKMEPH 600
L +A R++EA + M+ M +P ++ LL +G + + E MV K P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 601 NSGMYVLLSNLYAASGRWADAGNMRSRMRDVG-VQKVTGYSWV 642
N+ + L + + A M +M D+G V V Y+ +
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 140/689 (20%), Positives = 273/689 (39%), Gaps = 157/689 (22%)
Query: 98 NARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAM 153
N + + + + D+ D+V++ V++ R+L A+ +F+ M + D V++ +
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 154 LSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 209
L ++ N D ++ + +M + +++ L+ A G EA D D +
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 210 I----SWNCLMGGFVKRKMLGAARKL---------------------------------- 231
+ ++N L+ G ++ L A +L
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 232 -FDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYV 282
F+KM + ++V+ N + A+ G +AK +F D D T+ M+ Y
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 283 QNGMLDEARTFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVS 334
+ G +DEA +M + + I N+++ +++++D A ++F M V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 335 SWNTMITGYGQNGDIAQARKLFDMMPQRDC------------------------------ 364
++NT++ G G+NG I +A +LF+ M Q+ C
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 365 ---------VSWAAIISGYAQTGHYEEALNMFIEIKR----------------DGESLNR 399
++ II G + G +EA+ F ++K+ SL
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694
Query: 400 STFSCA---LSTCADIAALELGKQIHGQVV-KTGYETG------------CFVGNALLG- 442
+ L CAD A + + G ++ + G + C G+++L
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 443 -MYFKC--GSIGEANDVFE------GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKT 493
+ + C ++ A +FE G++ K + ++N +I G + A VF +K+
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPK-LPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 494 IGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE 553
G PD T +L A +G ID E + M+ + ++ + +I L +AG ++
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST-HECEANTITHNIVISGLVKAGNVD 872
Query: 554 EA----QDLMRNMPFEPPAASWGALLG----ASRIHGNTELGEKAAEMVFKMEPHNSGMY 605
+A DLM + F P A ++G L+ + R++ +L E + + P N +Y
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD--YGCRP-NCAIY 929
Query: 606 VLLSNLYAASGRWADAGNMRSRMRDVGVQ 634
+L N + +G A + RM GV+
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVR 958
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 222/546 (40%), Gaps = 96/546 (17%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLRNARFSLARDL 107
P+ + +IS R G D L VF+ MP RS SY A+I+ Y RN R+ + +L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 108 FDKMPQR----DLVSWNVMLTGYVR-----NRRLGDARRLFDSMPQKDVVSWNAMLSGYA 158
D+M ++++N ++ R LG + Q D+V++N +LS A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 159 QNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNC 214
G DEA VF M + +++ L+ + R+E+ C L +
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS-------- 310
Query: 215 LMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQ------SPH 268
GG + D+ S+N ++ YA+ G + +A +F Q +P+
Sbjct: 311 --GG-----------------SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 269 QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNE----ISYNAMVAGYVQSNKMDMAREL 324
+ T++ +++ + Q+G D+ R F +M N +YN ++ + + L
Sbjct: 352 AN--TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 325 FEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQ 376
F M N+ ++ +I G+ G ARK+ M D V ++ +I + Q
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 377 TGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
YEEAL F + G + + TF L + A ++ + I ++V +G
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG------- 522
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGV 496
I D F N I Y + G ++A+ + M+
Sbjct: 523 -------------IPRNRDTF-----------NAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 497 KPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ 556
PDE T+ VLS S A L+D E F M K + PS Y M+ + G+ R ++
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 557 DLMRNM 562
+L+ M
Sbjct: 618 ELLEEM 623
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 58/363 (15%)
Query: 250 YAQDGDMSQAKNLFDQSPHQ-----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----K 300
+A GD ++ LF Q + +T M+S + G+LD+ FD+MP +
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 301 NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNG-DIAQARKL 355
+ SY A++ Y ++ + + + EL + M + +S ++NT+I + G D L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 356 FDMMP----QRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCAD 411
F M Q D V++ ++S A G +EA +F + G + +T+S + T
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 412 IAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE---------- 461
+ LE + G++ G N LL Y K GSI EA VF ++
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 462 -----------------------------EKDVVSWNTMIAGYARHGFGKQALMVFESMK 492
+ D ++N +I + G+ K+ + +F M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRL 552
++PD T G++ AC GL + + M + + PSSK YT +I+ G+A
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALY 473
Query: 553 EEA 555
EEA
Sbjct: 474 EEA 476
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 185/433 (42%), Gaps = 34/433 (7%)
Query: 173 MPHKNAISWNGLL--AAYVHNGRIEEACRL-FDSKSDWELISWNCLMGGFVKRKMLGAAR 229
+P+ N+ + L+ ++++ N R + RL F S + + S++ + K +LG
Sbjct: 5 IPNPNSHHLSFLIQNSSFIGNRRFADGNRLRFLSGGNRKPCSFSGKIKAKTKDLVLGNPS 64
Query: 230 KLFDK-MHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGMLD 288
+K + DV S +S G +++ ++F + F + + G
Sbjct: 65 VSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFAL--VFKEFAGRGDWQ 122
Query: 289 EARTFFDQMPQK-----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTM 339
+ F M ++ NE Y M++ + +D E+F+ MPS+ VS S+ +
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 340 ITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTG-HYEEALNMFIEIKRDG 394
I YG+NG + +L D M +++ +I+ A+ G +E L +F E++ +G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 395 ESLNRSTFSCALSTCA-----DIAALELGKQIHGQVVK--TGYETGCFVGNALLGMYFKC 447
+ T++ LS CA D A + G +V T Y L + C
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 448 GSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
+GE + G D+ S+N ++ YA+ G K+A+ VF M+ G P+ T +L
Sbjct: 303 DLLGE---MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PF 564
+ +G D + F M K + P + Y +I++ G G +E L +M
Sbjct: 360 NLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 565 EPPAASWGALLGA 577
EP ++ ++ A
Sbjct: 419 EPDMETYEGIIFA 431
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 21/314 (6%)
Query: 330 SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTGHYEEALNMFIE 389
S +V S ++ G IA+ +F + +A + +A G ++ +L +F
Sbjct: 73 SYDVESLINKLSSLPPRGSIARCLDIFK--NKLSLNDFALVFKEFAGRGDWQRSLRLFKY 130
Query: 390 IKRDG-ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCG 448
++R N ++ +S L+ ++ ++ G F AL+ Y + G
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 449 SIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALM-VFESMKTIGVKPDEITM 503
+ ++ + ++ + ++++NT+I AR G + L+ +F M+ G++PD +T
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
+LSAC+ GL D F +MN D + P Y+ +++ G+ RLE+ DL+ M
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 564 FE---PPAASWGALLGASRIHGNTELGEKAAEMVF-KMEPH----NSGMYVLLSNLYAAS 615
P S+ LL A G+ K A VF +M+ N+ Y +L NL+ S
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSI----KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 616 GRWADAGNMRSRMR 629
GR+ D + M+
Sbjct: 366 GRYDDVRQLFLEMK 379
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARDL 107
PD+ +N ++ + ++G A+ VF+ M +Y+ +++ + ++ R+ R L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
F +M D ++N+++ + + LF M ++ D+ ++ ++ +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 160 NGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDS----KSDWELIS 211
G ++AR++ M + + ++ G++ A+ EEA F++ S+ + +
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 212 WNCLM-----GGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQA-KNLFDQ 265
++ L+ GG VK +R L D R+ ++N I Y Q G +A K D
Sbjct: 495 FHSLLYSFARGGLVKESEAILSR-LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Query: 266 SPHQ---DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEIS----YNAMVAGYVQSNKM 318
+ D T A++S Y ++DE R F++M + + Y M+A Y ++ +
Sbjct: 554 EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERW 613
Query: 319 DMARELFEAMPSRNVSSWNTMI 340
D EL E M S VS+ + +I
Sbjct: 614 DDVNELLEEMLSNRVSNIHQVI 635
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 252/550 (45%), Gaps = 50/550 (9%)
Query: 72 SALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVS----WNVMLTGYV 127
+ + F + + S + M+ Y R AR+ F++M R + + ++ Y
Sbjct: 296 AVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA 355
Query: 128 RNRRLGDA----RRLFDSMPQKDVVSWNAMLSGYAQNGYA-------DEAREVFYQMPHK 176
R + +A R++ + + +V+++ ++ G+++ G+A DEA+ + +
Sbjct: 356 VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL--- 412
Query: 177 NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELISWNCLMGGFV----KRKMLGAA 228
NA + ++ A+ +E A L + D + ++ +M G+ ++K L
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 229 RKLFDKMHVRDVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQN 284
++L + VV++ +I+ Y + G +S+A + + ++ ++ T++ M++G+V+
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 285 GMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSW 336
A F+ M ++ + I YN +++ + MD A + + M ++
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 337 NTMITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKR 392
+I GY ++GD+ ++ ++FDMM + CV ++ +I+G + E+A+ + E+
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 393 DGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGE 452
G S N T++ + A + + ++ G + F ALL K G +
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 453 ANDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLS 508
A V + + +++ +N +I G+AR G +A + + MK GVKPD T +S
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 509 ACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA---QDLMRNMPFE 565
ACS AG ++R T+ M V P+ K YT +I RA E+A + M+ M +
Sbjct: 773 ACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 566 PPAASWGALL 575
P A + LL
Sbjct: 832 PDKAVYHCLL 841
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/551 (19%), Positives = 230/551 (41%), Gaps = 55/551 (9%)
Query: 121 VMLTGYVRNRRLGDARRLFDSMPQKDVVSW-------NAMLSGYAQNGYADEAREVFYQM 173
V G + +L D +RL Q+ V W M + + + + +R+ ++
Sbjct: 229 VEFHGRILTVKLDDGKRLKTKAEQR--VRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRI 286
Query: 174 PHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFD 233
N +W +++A F+ S + ++ + +R + AR+ F+
Sbjct: 287 LDTNGDNWQAVISA-------------FEKISKPSRTEFGLMVKFYGRRGDMHRARETFE 333
Query: 234 KMHVRDVVS----WNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNG 285
+M R + + ++I YA DM +A + + ++ + T++ +V G+ + G
Sbjct: 334 RMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 286 MLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSS----WN 337
+ A +FD+ + N Y ++ + Q+ M+ A L M + + ++
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 338 TMITGYGQNGDIAQARKLFDMMPQRDC------VSWAAIISGYAQTGHYEEALNMFIEIK 391
TM+ GY D + +F + ++C V++ +I+ Y + G +AL + +K
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRL--KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 392 RDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIG 451
+G N T+S ++ + + +VK G + + N ++ + G++
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 452 EANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVL 507
A + +++ ++ +I GYA+ G +++L VF+ M+ G P T G++
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 508 SACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID---LLGRAGRLEEAQDLMRNMPF 564
+ +++ E M V+ + YT ++ +G G+ E ++N
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLA-GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 565 EPPAASWGALLGASRIHGNTELGEKAA-EMVFKMEPHNSGMYVLLSNLYAASGRWADAGN 623
+ ++ ALL A G + EM + P NS +Y +L + +A G +A +
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 624 MRSRMRDVGVQ 634
+ +M+ GV+
Sbjct: 751 LIQQMKKEGVK 761
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 147/318 (46%), Gaps = 42/318 (13%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDL 107
PD++ +N +IS G+ D A++ M R ++ ++ +I GY ++ + ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 108 FDKMPQRDLV----SWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYAQ 159
FD M + V ++N ++ G V R++ A + D M V ++ ++ GYA
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----IS 211
G +A E F ++ ++ + ++ LL A +GR++ A + S +
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQ-- 265
+N L+ G+ +R + A L +M D+ ++ + IS ++ GDM++A ++
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 266 --SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQM------PQK--------NEISYNAMV 309
++ T+T ++ G+ + + ++A + +++M P K + +S ++
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 310 AGYVQSNKMDMARELFEA 327
Y+ S M + +E+ EA
Sbjct: 852 EAYIYSGVMTICKEMVEA 869
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 236/542 (43%), Gaps = 67/542 (12%)
Query: 85 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFD 140
+V Y +ISG + F A D ++M ++V+++ +L G + ++LG +R+ +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 141 SM------PQKDVVSWNAMLSGYAQNG---YADEAREVFYQMPHKNAISWNGLLAAYVHN 191
M P + +N+++ Y +G YA + + + H +L +
Sbjct: 362 MMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 192 GRIEEACRLFD--SKSDWELIS-------------WNCLMGGFVKRKMLGAARKLFDKMH 236
+ C L D K+ E+++ CL K R++ +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 237 VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPH----QDVFTWTAMVSGYVQNGMLDEART 292
+ D +++ +++ M A LF++ DV+T+T MV + + G++++AR
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 293 FFDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYG 344
+F++M + N ++Y A++ Y+++ K+ A ELFE M S N+ +++ +I G+
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 345 QNGDIAQARKLFDMM------PQRD--------------CVSWAAIISGYAQTGHYEEAL 384
+ G + +A ++F+ M P D V++ A++ G+ ++ EEA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
+ + +G N+ + + + L+ +++ ++ + G+ + ++L+ Y
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 445 FKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDE 500
FK A+ V + E +VV + MI G + G +A + + M+ G +P+
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 501 ITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMR 560
+T ++ G I+ E M V P+ Y +ID + G L+ A +L+
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 561 NM 562
M
Sbjct: 839 EM 840
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 111/578 (19%), Positives = 227/578 (39%), Gaps = 84/578 (14%)
Query: 89 NAMISGYLRNARFSLARDLFDKM------PQRDLVSWNVMLTGYVRNRRLGDARRLFDSM 142
N ++ + RN FS+A + ++ P R ++N ++ +++ RL A S+
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRS--TYNCLIQAFLKADRLDSA-----SL 256
Query: 143 PQKDVVSWNAMLSGYAQNGYADEA------REVFYQMPHKN----AISWNGLLAAYVHNG 192
+++ N + G+ +A RE + +N + + L++
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 193 RIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVS----WN 244
EEA R+ + +++++ L+ G + +K LG +++ + M + +N
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 245 TMISGYAQDGDMSQAKNLFDQSPHQDVFTWTAMVSGYVQNGML-----DEARTFFDQMPQ 299
+++ Y GD S A L + + GYV +L + + +
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKK------MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430
Query: 300 KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGYGQ-NGDIAQARKLFDM 358
E +Y+ M+A V NK+ NVSS+ + G+ + R++
Sbjct: 431 LAEKAYSEMLAAGVVLNKI-------------NVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 359 MPQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELG 418
D +++ +++ E A +F E+KR G + T++ + + +E
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 419 KQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAG 474
++ ++ + G AL+ Y K + AN++FE + + ++V+++ +I G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 475 YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTP 534
+ + G ++A +FE M PD + ++ D S P
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPD--------------------VDMYFKQYDDNSERP 637
Query: 535 SSKHYTCMIDLLGRAGRLEEAQDLMRNMPF---EPPAASWGALL-GASRIHGNTELGEKA 590
+ Y ++D ++ R+EEA+ L+ M EP + AL+ G ++ E E
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 591 AEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRSRM 628
EM P Y L + Y R A + S+M
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/407 (17%), Positives = 157/407 (38%), Gaps = 96/407 (23%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTM--------------------PRRSSVSYNAM 91
P+++ ++ +I H + G + A ++F M R + V+Y A+
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 92 ISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQ--- 144
+ G+ ++ R AR L D M + + + ++ ++ G + +L +A+ + M +
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 145 ------------------------------------KDVVSWNAMLSGYAQNGYADEARE 168
+VV + M+ G + G DEA +
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 169 VFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFV 220
+ M K N +++ ++ + G+IE L + + +++ L+
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 221 KRKMLGAARKLFDKMHVRDVVSWNTMISGYAQ-----DGDMSQAKNLFDQSPHQDVFTWT 275
K L A L ++M W T +GY + + + ++ L D+ D +
Sbjct: 826 KNGALDVAHNLLEEMKQ---THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFL 882
Query: 276 AMVSGYVQN-----------GMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAREL 324
++ + N +L+E TF + + +YN+++ +NK++ A +L
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS-TYNSLIESLCLANKVETAFQL 941
Query: 325 FEAMPSRNV----SSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSW 367
F M + V S+ ++I G +N I++A L D + + + W
Sbjct: 942 FSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME-IQW 987
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 238/509 (46%), Gaps = 68/509 (13%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
P+ + +N +I H+ G+ AL++F M + S VSY ++ G +NA F LAR
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 108 FDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQ 159
+ +M + + +++ M+ G +N L +A L + M + D+V+++A+++G+ +
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 160 NGYADEAREVFYQMPHKNAISWNGLL-AAYVHN----GRIEEACRLFDSK----SDWELI 210
G A+E+ ++ ++ +S NG++ + ++N G ++EA R++++ +
Sbjct: 491 VGRFKTAKEIVCRI-YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
++N L+ K + A + M + + VS++ +I+GY G+ +A ++FD+
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 267 P----HQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMAR 322
H FT+ +++ G + G L EA F +
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------------------------- 644
Query: 323 ELFEAMPSR-NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQT 377
A+P+ + +NT++T ++G++A+A LF M QR D ++ ++ISG +
Sbjct: 645 ---HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 378 GHYEEALNMFIEIKRDGESL-NRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
G A+ E + G L N+ ++C + + G Q+ G+
Sbjct: 702 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMK 492
NA++ Y + G I + ND+ + + ++ ++N ++ GY++ + +++ S+
Sbjct: 762 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Query: 493 TIGVKPDEITMVGVLSACSHAGLIDRGTE 521
G+ PD++T ++ + +++ G +
Sbjct: 822 LNGILPDKLTCHSLVLGICESNMLEIGLK 850
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 118/593 (19%), Positives = 247/593 (41%), Gaps = 73/593 (12%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
PD+ +N +I+ G + + + M + + V+YN ++ Y + RF A +L
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVSWNAMLSGYAQNGYA 163
D M + D+ ++N+++ R+ R+ L M ++
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR------------------ 332
Query: 164 DEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGF 219
M H N +++N L+ + + G++ A +L + + L +++N L+ G
Sbjct: 333 ---------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 220 VKRKMLGAARKLFDKMHVRDV----VSWNTMISGYAQDGDMSQAKNLFDQSPHQDV---- 271
+ A K+F M + + VS+ ++ G ++ + A+ + + V
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 272 FTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMDMARE---- 323
T+T M+ G +NG LDEA ++M + + ++Y+A++ G+ + + A+E
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 324 LFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGH 379
++ S N ++T+I + G + +A ++++ M RD ++ +++ + G
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 380 YEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNA 439
EA + DG N +F C ++ + + ++ K G+ F +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 440 LLGMYFKCGSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIG 495
LL K G + EA + + D V +NT++ + G +A+ +F M
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 496 VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEA 555
+ PD T ++S G + +V P+ YTC +D + +AG+ +
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 556 ---QDLMRNMPFEPPAASWGALLGASRIHGNTELG--EKAAEMVFKMEPHNSG 603
++ M N+ P + A+ I G + +G EK +++ +M N G
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAM-----IDGYSRMGKIEKTNDLLPEMGNQNGG 791
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/584 (21%), Positives = 254/584 (43%), Gaps = 61/584 (10%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRRSS----VSYNAMISGYLRNARFSLARDLFDK 110
+ + +I +NG D A+ + N M + V+Y+A+I+G+ + RF A+++ +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 111 MPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYAQNGY 162
+ + L + ++ ++ R L +A R++++M +D ++N +++ + G
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 163 ADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISWNC 214
EA E M N +S++ L+ Y ++G +A +FD + ++
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 215 LMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF----DQS 266
L+ G K L A K +H D V +NT+++ + G++++A +LF +S
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 267 PHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK-----NEISYNAMVAGYVQSNKMDMA 321
D +T+T+++SG + G A F + + N++ Y V G ++ +
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 322 RELFEAMP----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRD----CVSWAAIISG 373
E M + ++ + N MI GY + G I + L M ++ ++ ++ G
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 374 YAQTGHYEEALNMFIEIKRDGESLNRST-FSCALSTCADIAALELGKQIHGQVVKTGYET 432
Y++ + ++ I +G ++ T S L C LE+G +I + G E
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES-NMLEIGLKILKAFICRGVEV 862
Query: 433 GCFVGNALLGMYFKCGSIGEANDVFEGIE---------EKDVVSWNTMIAGYARHGFGKQ 483
+ N L+ KC + GE N F+ ++ +KD + + M++ R+ ++
Sbjct: 863 DRYTFNMLIS---KCCANGEINWAFDLVKVMTSLGISLDKD--TCDAMVSVLNRNHRFQE 917
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
+ MV M G+ P+ +G+++ G I M + + P + + M+
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA-HKICPPNVAESAMV 976
Query: 544 DLLGRAGRLEEAQDLMR---NMPFEPPAASWGALLGASRIHGNT 584
L + G+ +EA L+R M P AS+ L+ +GN
Sbjct: 977 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/636 (18%), Positives = 258/636 (40%), Gaps = 93/636 (14%)
Query: 74 LRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLG 133
L+ + M +SS + A+++ Y ++ + +++++ Y+R +
Sbjct: 135 LKELSLMSGKSSFVFGALMTTY--------------RLCNSNPSVYDILIRVYLREGMIQ 180
Query: 134 DARRLFDSMP----QKDVVSWNAMLSGYAQNGYADEA----REVFYQMPHKNAISWNGLL 185
D+ +F M V + NA+L ++G +E+ + + ++N L+
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 186 AAYVHNGRIEEACRLFDS--KSDW--ELISWNCLMGGFVKRKMLGAARKLFDKMHVR--- 238
G E++ L KS + ++++N ++ + K+ AA +L D M +
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 239 -DVVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTF 293
DV ++N +I + +++ +++ + H + T+ +++G+ G + A
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 294 FDQMPQ----KNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQ 345
++M N +++NA++ G++ A ++F M ++ ++ S+ ++ G +
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 346 NGDIAQARKLFDMMPQRD-CV---SWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 401
N + AR + M + CV ++ +I G + G +EA+ + E+ +DG + T
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 402 FSCALSTCADIAALELGKQIHGQVVKTG-------YET--------GC------------ 434
+S ++ + + K+I ++ + G Y T GC
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 435 --------FVGNALLGMYFKCGSIGEANDVFEGIEEKDV----VSWNTMIAGYARHGFGK 482
F N L+ K G + EA + + + VS++ +I GY G G
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 483 QALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCM 542
+A VF+ M +G P T +L G + ++ S++ + Y +
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA-VPAAVDTVMYNTL 659
Query: 543 IDLLGRAGRLEEAQDLMRNM---PFEPPAASWGALLGASRIHGNTELG---EKAAEMVFK 596
+ + ++G L +A L M P + ++ +L+ G T + K AE
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 597 MEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVG 632
+ P N MY + +G+W R +M ++G
Sbjct: 720 VLP-NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/518 (18%), Positives = 210/518 (40%), Gaps = 87/518 (16%)
Query: 84 SSVSYNAMISGYLRNARFSLARDLFDKMPQ----RDLVSWNVMLTGYVRNRRLGDARRLF 139
++VS++ +I+GY + A +FD+M + ++ +L G + L +A +
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 140 DSM----PQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHN 191
S+ D V +N +L+ ++G +A +F +M ++ + ++ L++
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 192 GRIEEACRLFDSKSDWE------LISWNCLMGGFVKRKMLGAARKLFDKM----HVRDVV 241
G+ A LF +++ + + C + G K A ++M H D+V
Sbjct: 702 GKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 242 SWNTMISGYAQDGDMSQAKNLFDQSPHQD----VFTWTAMVSGYVQNGMLDEARTFFDQ- 296
+ N MI GY++ G + + +L + +Q+ + T+ ++ GY + + + +
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 297 -----MPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNG 347
+P K ++ +++V G +SN +++ ++ +A R V ++N +I+ NG
Sbjct: 821 ILNGILPDK--LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Query: 348 DIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFS 403
+I A L +M D + A++S + ++E+ + E+ + G S +
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 404 CALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEAN--------- 454
++ + ++ + +++ +A++ KCG EA
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 455 --------------------DVFEGIEEK----------DVVSWNTMIAGYARHGFGKQA 484
+V E +E + D+VS+N +I G G A
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEY 522
++E MK G + T ++ GL+ R T +
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIR-----GLLARETAF 1091
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/555 (20%), Positives = 254/555 (45%), Gaps = 65/555 (11%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNAR----FSL 103
P++ +N +I G+ D AL +F+ M + + V+YN +I GY + + F L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 104 ARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
R + K + +L+S+NV++ G R R+ + + M ++ D V++N ++ GY +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 160 NGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----S 211
G +A + +M + I++ L+ + G + A D L +
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQA----KNLF 263
+ L+ GF ++ + A ++ +M+ VV++N +I+G+ G M A +++
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 264 DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
++ DV +++ ++SG+ ++ +DEA +M +K + I+Y++++ G+ + +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 320 MARELFEAMPSRNVS----SWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAII 371
A +L+E M + ++ +I Y GD+ +A +L + M ++ D V+++ +I
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
+G + EA + +++ + + T+ + C++I + I G +K
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK---- 618
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVFEGI----EEKDVVSWNTMIAGYARHGFGKQALMV 487
G + EA+ VFE + + D ++N MI G+ R G ++A +
Sbjct: 619 ----------------GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 488 FESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLG 547
++ M G +T++ ++ A G ++ + + ++ ++ ++++
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVEINH 721
Query: 548 RAGRLEEAQDLMRNM 562
R G ++ D++ M
Sbjct: 722 REGNMDVVLDVLAEM 736
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 237/510 (46%), Gaps = 74/510 (14%)
Query: 57 WNKVISTHMRNGHCDSALRVFNT------MPRRSSVSYNAMISGYLRNAR-FSLARDLFD 109
++ V+ ++ R D AL + + MP +SYNA++ +R+ R S A ++F
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMP--GVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 110 KMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNG 161
+M + ++ ++N+++ G+ + A LFD M K +VV++N ++ GY +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 162 YADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD--SKSDWEL--ISWN 213
D+ ++ M K N IS+N ++ GR++E + ++ + L +++N
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 214 CLMGGFVKRKMLGAARKLFDKM----HVRDVVSWNTMISGYAQDGDMSQAKNLFDQ---- 265
L+ G+ K A + +M V+++ ++I + G+M++A DQ
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 266 --SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMD 319
P++ T+T +V G+ Q G ++EA +M + ++YNA++ G+ + KM+
Sbjct: 375 GLCPNER--TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 320 MARELFEAMPSRNVS----SWNTMITGYGQNGDIAQA----RKLFDMMPQRDCVSWAAII 371
A + E M + +S S++T+++G+ ++ D+ +A R++ + + D ++++++I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 372 SGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYE 431
G+ + +EA +++ E+ R G + T++ ++ LE Q+H ++V+ G
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 432 TGCFVGNALLGMYFKCGSIGEANDVF----------------------EGIEEKDVVSWN 469
+ L+ K EA + IE K VVS
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS-- 610
Query: 470 TMIAGYARHGFGKQALMVFESMKTIGVKPD 499
+I G+ G +A VFESM KPD
Sbjct: 611 -LIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 202/457 (44%), Gaps = 69/457 (15%)
Query: 147 VVSWNAMLSG---------YAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNGRIEEA 197
V+S+NA+L +A+N + +E+ N ++N L+ + G I+ A
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVF----KEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 198 CRLFDSKSDW----ELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISG 249
LFD ++++N L+ G+ K + + KL M ++ +++S+N +I+G
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 250 YAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KN 301
++G M + + + + D T+ ++ GY + G +A +M + +
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 302 EISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFD 357
I+Y +++ ++ M+ A E + M R N ++ T++ G+ Q G + +A ++
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 358 MMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
M V++ A+I+G+ TG E+A+ + ++K G S + ++S LS
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIA 473
++ ++ ++V+ G + D ++++++I
Sbjct: 465 DVDEALRVKREMVEKGIK-------------------------------PDTITYSSLIQ 493
Query: 474 GYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVT 533
G+ K+A ++E M +G+ PDE T +++A G +++ + M + V
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVL 552
Query: 534 PSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS 570
P Y+ +I+ L + R EA+ L+ + +E S
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 190/406 (46%), Gaps = 55/406 (13%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARD 106
+P+L+ +N VI+ R G V M RR V+YN +I GY + F A
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 107 LFDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMPQKDVV----SWNAMLSGYA 158
+ +M + L +++ ++ + + A D M + + ++ ++ G++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELI 210
Q GY +EA V +M + +++N L+ + G++E+A + + + +++
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 211 SWNCLMGGFVKR----KMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQS 266
S++ ++ GF + + L R++ +K D ++++++I G+ + +A +L+++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 267 PH----QDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
D FT+TA+++ Y G L++A ++M +K + ++Y+ ++ G + ++
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 319 DMARELF------EAMPS--------RNVS-----SWNTMITGYGQNGDIAQARKLFDMM 359
A+ L E++PS N S S ++I G+ G + +A ++F+ M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 360 PQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRST 401
+ D ++ +I G+ + G +A ++ E+ + G L+ T
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 131/299 (43%), Gaps = 52/299 (17%)
Query: 303 ISYNAMVAGYVQSNK-----MDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFD 357
+SYNA++ ++S + ++ +E+ E+ S NV ++N +I G+ G+I A LFD
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 358 MMPQRDC----VSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIA 413
M + C V++ +I GY + + DG L RS
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKID-----------DGFKLLRS------------M 266
Query: 414 ALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWN 469
AL+ G E N ++ + G + E + V + + D V++N
Sbjct: 267 ALK------------GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 470 TMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKD 529
T+I GY + G QAL++ M G+ P IT ++ + AG ++R E+ M +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RV 373
Query: 530 YSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNTE 585
+ P+ + YT ++D + G + EA ++R M F P ++ AL+ + G E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 144/638 (22%), Positives = 285/638 (44%), Gaps = 77/638 (12%)
Query: 60 VISTHMRNGHCDSAL----RVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFD-KMPQR 114
+I + +G DS L F P +S A + G + +F LA FD M Q+
Sbjct: 106 LIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQK 165
Query: 115 DLVSW------NVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYAD 164
D S ++++ + R+ A +F+ + + DV S+ +++S +A +G
Sbjct: 166 DYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYR 225
Query: 165 EAREVFYQMPH----KNAISWNGLLAAYVHNGRI-EEACRLFDS-KSDW---ELISWNCL 215
EA VF +M I++N +L + G + L + KSD + ++N L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 216 MGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQ------ 265
+ + + A ++F++M D V++N ++ Y + +A + ++
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 266 SPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMA 321
SP + T+ +++S Y ++GMLDEA +QM +K + +Y +++G+ ++ K++ A
Sbjct: 346 SP--SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 322 RELFEAMPS----RNVSSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISG 373
+FE M + N+ ++N I YG G + K+FD + D V+W +++
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 374 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG 433
+ Q G E +F E+KR G R TF+ +S + + E ++ +++ G
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQ-ALM-- 486
N +L + G ++ V +E+ + +++ +++ YA GK+ LM
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN---GKEIGLMHS 580
Query: 487 VFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLL 546
+ E + + ++P + + ++ CS L+ F + K+ +P M+ +
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIY 639
Query: 547 GRAGRLEEAQ---DLMRNMPFEPPAASWGALL---GASRIHGNTELGEKAAEMVFK-MEP 599
GR + +A D M+ F P A++ +L+ S G +E E E++ K ++P
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE--EILREILAKGIKP 697
Query: 600 ----HNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
+N+ +Y Y + R DA + S MR+ G+
Sbjct: 698 DIISYNTVIYA-----YCRNTRMRDASRIFSEMRNSGI 730
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/563 (20%), Positives = 240/563 (42%), Gaps = 64/563 (11%)
Query: 46 KPDVKDPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARF 101
K D PD +N +I+ R A +VF M V+YNA++ Y ++ R
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 102 SLARDLFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAM 153
A + ++M +V++N +++ Y R+ L +A L + M +K DV ++ +
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 154 LSGYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEACRLFDSKS---- 205
LSG+ + G + A +F +M + N ++N + Y + G+ E ++FD +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 206 DWELISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQA-- 259
++++WN L+ F + M +F +M V + ++NT+IS Y++ G QA
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 260 --KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYV 313
+ + D D+ T+ +++ + GM +++ +M + NE++Y +++ Y
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 314 QSNKMDMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISG 373
++ + L E + S + ++ + D++P
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLK------TLVLVCSKCDLLP------------- 611
Query: 374 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG 433
EA F E+K G S + +T + +S + + + + G+
Sbjct: 612 --------EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFE 489
N+L+ M+ + G++ ++ I K D++S+NT+I Y R+ + A +F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
M+ G+ PD IT + + + + + M K + P+ Y ++D +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKL 782
Query: 550 GRLEEAQDLMRNMPFEPPAASWG 572
R +EA+ + ++ P A G
Sbjct: 783 NRKDEAKLFVEDLRNLDPHAPKG 805
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 146/670 (21%), Positives = 284/670 (42%), Gaps = 92/670 (13%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMPRRSSV----SYNAMISGYLRNARFSLARD 106
D D+ K+ ++ R G D AL +F + V S M++ + + R L D
Sbjct: 145 DADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD 202
Query: 107 LFDKMPQRDLVSWNVMLTGYVRN---------RRLGDARRLFDSMPQKDVVSWNAMLSGY 157
FDK+ + + V G+V + + L R + + + +VS N +L G
Sbjct: 203 HFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 158 AQNGYADEAREVFYQM---PHKNAISWNGLLAAYVHNGRIEEACRLFDSKS----DWELI 210
+ + +R + + P N +++ L+ + G ++ A LF + +LI
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 211 SWNCLMGGFVKRKMLGAARKLFDK-MHV---RDVVSWNTMISGYAQDGDMSQA----KNL 262
+++ L+ G+ K MLG KLF + +H DVV +++ I Y + GD++ A K +
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 263 FDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
Q +V T+T ++ G Q+G + EA + Q+ ++ + ++Y++++ G+ + +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 319 DMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKL-FDMMPQR---DCVSWAAI 370
L+E M +V + ++ G + G + A + M+ Q + V + ++
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 371 ISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSC-------------------------- 404
I G+ + ++EAL +F + G + +TF+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 405 ---ALSTCADIAAL------ELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA-- 453
AL+ C I A +G Q+ + + V N ++ + FKC I +A
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 454 --NDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
N++ EG E D+V++NTMI GY +A +FE +K P+ +T+ ++
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 512 HAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP---FEPPA 568
+D G +S+ + P++ Y C++D ++ +E + L M P
Sbjct: 683 KNNDMD-GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 569 ASWGALLGA----SRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNM 624
S+ ++ R+ T + +A + K+ P + Y +L Y GR +A +
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLP-DVVAYAILIRGYCKVGRLVEAALL 798
Query: 625 RSRMRDVGVQ 634
M GV+
Sbjct: 799 YEHMLRNGVK 808
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/536 (20%), Positives = 221/536 (41%), Gaps = 110/536 (20%)
Query: 76 VFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRR 131
V + P + V++ +I+G+ + A DLF M QR DL++++ ++ GY +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 132 LGDARRLFDSMPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNG 183
LG +LF K DVV +++ + Y ++G A V+ +M + N +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 184 LLAAYVHNGRIEEAC----RLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKM---- 235
L+ +GRI EA ++ + +++++ L+ GF K L + L++ M
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 236 HVRDVVSWNTMISGYAQDGDMSQAK----------------------------NLFDQS- 266
+ DVV + ++ G ++ G M A N FD++
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 267 ----------PHQDVFTWTAMVSGYVQNGMLDEARTFFDQM----PQKNEISYNAMVAGY 312
DV T+T ++ + G L+EA F +M + + ++Y ++ +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 313 VQSNKMDMARELFEAMPSRNVS-------------------------------------- 334
+ K + +LF+ M +S
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 335 -SWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIE 389
++NTMI GY + +A ++F+++ + V+ +I + + A+ MF
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 390 IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGS 449
+ G N T+ C + + +E ++ ++ + G + ++ K G
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 450 IGEANDVF-EGIEEK---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEI 501
+ EA ++F + I+ K DVV++ +I GY + G +A +++E M GVKPD++
Sbjct: 757 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 134/595 (22%), Positives = 257/595 (43%), Gaps = 68/595 (11%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDK 110
L W+ ++ R D +L + M + S+ SYN+++ + + D++ +
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKE 181
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEA 166
+ ++ +++ ++ G R ++L DA + KD VVS+N+++SGY + G+ D A
Sbjct: 182 IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA 241
Query: 167 REVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGG 218
+ F + + S N L+ G I EA L + + + +++N L G
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 219 FVKRKMLGAA----RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----- 269
F M+ A R + DK DV+++ ++ G Q G++ L +
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELF 325
+ + M+SG + G +DEA + F+QM + ++Y+ ++ G + K DMA L+
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 326 EAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQT 377
+ M + N + ++ G Q G + +AR L D + D V + +I GYA++
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G EEAL +F + G + + +TF+ + + ++I + G
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 438 NALLGMYFKCGSIGEANDV-----FEGIEEKDVVSWNTMIAGYAR---HGFGKQAL--MV 487
L+ Y CG+ +++ EGI + V+++ + G R H L +
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTN-VTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 488 FES-------MKTIGVKPDEI---TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
FE M++ G+ PD+I T++ L H G F + K ++ SS
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS----GAFVFLEIMKSRNLDASSA 656
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS---WGALLGASRIHGNTELGEK 589
Y +ID L G + +A + ++ + + S + L+ A + G+ E+ K
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 231/520 (44%), Gaps = 51/520 (9%)
Query: 71 DSALRVFNTM----PRRSSVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVM 122
D A+ +F M PR + ++ + S R ++ L DL +M + +L + ++M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 123 LTGYVRNRRLGDARRLFDSMP-------QKDVVSWNAMLSGYAQNGYADEAREV---FYQ 172
+ R R+L A F +M + D V+++ +++G G EA E+ +
Sbjct: 114 INCCCRCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 173 MPHK-NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL----ISWNCLMGGFVKRKMLGA 227
M HK I+ N L+ NG++ +A L D + +++ ++ K
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 228 ARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----DVFTWTAMVS 279
A +L KM R D V ++ +I G +DG + A NLF++ + D+ +T ++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 280 GYVQNGMLDE-ARTFFDQMPQK---NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS- 334
G+ G D+ A+ D + +K + ++++A++ +V+ K+ A EL + M R +S
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 335 ---SWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQTGHYEEALNMF 387
++ ++I G+ + + +A + D+M + C ++ +I+GY + ++ L +F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
++ G + T++ + ++ LE+ K++ ++V LL
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 448 GSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
G +A ++FE IE E D+ +N +I G A +F S+ GVKPD T
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
++ G + F M +D +P+ Y +I
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGH-SPNGCTYNILI 569
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/501 (20%), Positives = 227/501 (45%), Gaps = 63/501 (12%)
Query: 51 DPDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARD 106
+PD + ++ +I+ G AL + + M + + ++ NA+++G N + S A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 107 LFDKMP----QRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYA 158
L D+M Q + V++ +L ++ + A L M ++ D V ++ ++ G
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 159 QNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLF----DSKSDWELI 210
++G D A +F +M K + I + L+ + + GR ++ +L K +++
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 211 SWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLFD-- 264
+++ L+ FVK L A +L +M R D V++ ++I G+ ++ + +A ++ D
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 265 --QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKM 318
+ ++ T+ +++GY + ++D+ F +M + + ++YN ++ G+ + K+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 319 DMARELFEAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCVSWAAIISGYAQTG 378
++A+ELF+ M SR V + D VS+ ++ G G
Sbjct: 439 EVAKELFQEMVSRRV---------------------------RPDIVSYKILLDGLCDNG 471
Query: 379 HYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGN 438
E+AL +F +I++ L+ ++ + + + ++ + + G + N
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 439 ALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGYARHGFGKQALMVFESMKTI 494
++G K GS+ EA+ +F +EE + ++N +I + G ++ + E +K
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 495 GVKPDEITMVGVLSACSHAGL 515
G D T+ V+ S L
Sbjct: 592 GFSVDASTVKMVVDMLSDGRL 612
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 117/282 (41%), Gaps = 39/282 (13%)
Query: 360 PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGK 419
P+ + ++ + S A+T Y+ L++ +++ G + N T S ++ C L L
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 420 QIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEE----KDVVSWNTMIAGY 475
G+++K GYE + L+ G + EA ++ + + E +++ N ++ G
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 476 ARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPS 535
+G A+++ + M G +P+E+T VL +G E M ++ +
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLD 246
Query: 536 SKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVF 595
+ Y+ +ID L + G L+ A +L M + G KA ++
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIK---------------------GFKADIII- 284
Query: 596 KMEPHNSGMYVLLSNLYAASGRWADAGNMRSRMRDVGVQKVT 637
Y L + +GRW D + +RD+ +K+T
Sbjct: 285 ---------YTTLIRGFCYAGRWDDGAKL---LRDMIKRKIT 314
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 134/595 (22%), Positives = 257/595 (43%), Gaps = 68/595 (11%)
Query: 55 LKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDK 110
L W+ ++ R D +L + M + S+ SYN+++ + + D++ +
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKE 181
Query: 111 MPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADEA 166
+ ++ +++ ++ G R ++L DA + KD VVS+N+++SGY + G+ D A
Sbjct: 182 IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA 241
Query: 167 REVFYQMPHKNAI----SWNGLLAAYVHNGRIEEACRLFDSKS----DWELISWNCLMGG 218
+ F + + S N L+ G I EA L + + + +++N L G
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 219 FVKRKMLGAA----RKLFDKMHVRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ----- 269
F M+ A R + DK DV+++ ++ G Q G++ L +
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELF 325
+ + M+SG + G +DEA + F+QM + ++Y+ ++ G + K DMA L+
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 326 EAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQT 377
+ M + N + ++ G Q G + +AR L D + D V + +I GYA++
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 378 GHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVG 437
G EEAL +F + G + + +TF+ + + ++I + G
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 438 NALLGMYFKCGSIGEANDV-----FEGIEEKDVVSWNTMIAGYAR---HGFGKQAL--MV 487
L+ Y CG+ +++ EGI + V+++ + G R H L +
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTN-VTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 488 FES-------MKTIGVKPDEI---TMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSK 537
FE M++ G+ PD+I T++ L H G F + K ++ SS
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS----GAFVFLEIMKSRNLDASSA 656
Query: 538 HYTCMIDLLGRAGRLEEAQDLMRNMPFEPPAAS---WGALLGASRIHGNTELGEK 589
Y +ID L G + +A + ++ + + S + L+ A + G+ E+ K
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 231/533 (43%), Gaps = 85/533 (15%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
PD+ + I+ + G + A+++F+ M + V++N +I G R+ A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
+KM +R L+++++++ G R +R+GDA + M +K +V+ +N ++ + +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 215
G ++A E+ M K + ++N L+ Y NG+ + A RL + I +N
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEMLSIGFNVN 434
Query: 216 MGGFVKRKMLGAARKLFD-------KMHVRDVVS----WNTMISGYAQDGDMSQAKNLFD 264
G F L + +FD +M +R++ T+ISG + G S+A L+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 265 QSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSN 316
Q ++ D T A++ G + G LDEA ++ + + +SYN +++G
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 317 KMDMARELFEAMPSR---------------------------------------NVSSWN 337
K+D A + M R +V +++
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 338 TMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
MI G + + ++ FD M Q + V + +I Y ++G AL + ++K
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
G S N +T++ + + I+ +E K + ++ G E F AL+ Y K G + +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 454 NDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+ + K+V +++ MI GYAR G +A + M+ G+ PD IT
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 125/579 (21%), Positives = 249/579 (43%), Gaps = 54/579 (9%)
Query: 103 LARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMPQ---KDVVSWNAMLS 155
LA D+F + + + + N++LT VR FD + + DV + ++
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 156 GYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDW 207
+ + G +EA ++F +M N +++N ++ GR +EA ++ + +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF 263
LI+++ L+ G + K +G A + +M + +V+ +N +I + + G +++A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 264 DQSPHQDVF----TWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQS 315
D + + T+ ++ GY +NG D A +M N+ S+ +++
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 316 NKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQR----DCVSW 367
D A M RN+S T+I+G ++G ++A +L+ + D +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
A++ G + G +EA + EI G ++R +++ +S C L+ ++VK
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQ 483
G + + + L+ F + EA ++ + DV +++ MI G + ++
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
F+ M + V+P+ + ++ A +G + E M K ++P+S YT +I
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-KHKGISPNSATYTSLI 687
Query: 544 DLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
+ R+EEA+ L MR EP + AL I G +LG+ E H
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL-----IDGYGKLGQMVKVECLLREMH 742
Query: 601 ------NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
N Y ++ YA G +A + + MR+ G+
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 231/533 (43%), Gaps = 85/533 (15%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDL 107
PD+ + I+ + G + A+++F+ M + V++N +I G R+ A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
+KM +R L+++++++ G R +R+GDA + M +K +V+ +N ++ + +
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 160 NGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELISWNCL 215
G ++A E+ M K + ++N L+ Y NG+ + A RL + I +N
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEMLSIGFNVN 434
Query: 216 MGGFVKRKMLGAARKLFD-------KMHVRDVVS----WNTMISGYAQDGDMSQAKNLFD 264
G F L + +FD +M +R++ T+ISG + G S+A L+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 265 QSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSN 316
Q ++ D T A++ G + G LDEA ++ + + +SYN +++G
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 317 KMDMARELFEAMPSR---------------------------------------NVSSWN 337
K+D A + M R +V +++
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 338 TMITGYGQNGDIAQARKLFDMM----PQRDCVSWAAIISGYAQTGHYEEALNMFIEIKRD 393
MI G + + ++ FD M Q + V + +I Y ++G AL + ++K
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 394 GESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
G S N +T++ + + I+ +E K + ++ G E F AL+ Y K G + +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 454 NDVFEGIEEKDV----VSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEIT 502
+ + K+V +++ MI GYAR G +A + M+ G+ PD IT
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 125/579 (21%), Positives = 249/579 (43%), Gaps = 54/579 (9%)
Query: 103 LARDLFDKMPQRDL----VSWNVMLTGYVRNRRLGDARRLFDSMPQ---KDVVSWNAMLS 155
LA D+F + + + + N++LT VR FD + + DV + ++
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 156 GYAQNGYADEAREVFYQMPH----KNAISWNGLLAAYVHNGRIEEAC----RLFDSKSDW 207
+ + G +EA ++F +M N +++N ++ GR +EA ++ + +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 208 ELISWNCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQAKNLF 263
LI+++ L+ G + K +G A + +M + +V+ +N +I + + G +++A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 264 DQSPHQDVF----TWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQS 315
D + + T+ ++ GY +NG D A +M N+ S+ +++
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 316 NKMDMARELFEAMPSRNVSS----WNTMITGYGQNGDIAQARKLFDMMPQR----DCVSW 367
D A M RN+S T+I+G ++G ++A +L+ + D +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 368 AAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVK 427
A++ G + G +EA + EI G ++R +++ +S C L+ ++VK
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQ 483
G + + + L+ F + EA ++ + DV +++ MI G + ++
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 484 ALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMI 543
F+ M + V+P+ + ++ A +G + E M K ++P+S YT +I
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM-KHKGISPNSATYTSLI 687
Query: 544 DLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
+ R+EEA+ L MR EP + AL I G +LG+ E H
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL-----IDGYGKLGQMVKVECLLREMH 742
Query: 601 ------NSGMYVLLSNLYAASGRWADAGNMRSRMRDVGV 633
N Y ++ YA G +A + + MR+ G+
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 132/598 (22%), Positives = 264/598 (44%), Gaps = 62/598 (10%)
Query: 53 DLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLF 108
+++ +N +I+ + G + RV M R + V+Y ++I GY + A +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 109 DKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAMLSGYAQN 160
+ + ++ LV+ + V++ GY R ++ DA R+ D+M + V + N++++GY ++
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 161 GYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELI----SW 212
G EA ++F +M + ++N L+ Y G ++EA +L D E++ ++
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQA----KNLFD 264
N L+ G+ + L+ M R D +S +T++ + GD ++A +N+
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 265 QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDM 320
+ D T M+SG + ++EA+ D + + +Y A+ GY + +
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 321 ARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIIS 372
A + E M + + +NT+I+G + + + L + R ++ A+I+
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 373 GYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTC-----ADIAALELGKQIHGQVVK 427
G+ G ++A E+ G +LN + S ++ D A L L K + ++
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL 679
Query: 428 TGYETGCFVGNALLGMYFKCGSIGEA--NDVFEGIEEKDVVSWNTMIAGYARHGFGKQAL 485
GY++ A K I E+ N + + + + +N IAG + G + A
Sbjct: 680 PGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 739
Query: 486 MVFESMKTIG-VKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYS---VTPSSKHYTC 541
+F + + PDE T ++ C+ AG I++ +++ + + + P+ Y
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA----FTLRDEMALKGIIPNIVTYNA 795
Query: 542 MIDLLGRAGRLEEAQDLMRNMP---FEPPAASWGALLGASRIHGNT----ELGEKAAE 592
+I L + G ++ AQ L+ +P P A ++ L+ GN L EK E
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 226/528 (42%), Gaps = 86/528 (16%)
Query: 65 MRNGHCDSALRVFNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLT 124
+R G AL V++ M F ++ D+F + ++++
Sbjct: 201 VRKGENFVALHVYDQMIS------------------FEVSPDVF---------TCSIVVN 233
Query: 125 GYVRNRRLGDARRLFDSMP-----QKDVVSWNAMLSGYAQNGYADEAREVFYQMPH---- 175
Y R+ + A + +VV++N++++GYA G + V M
Sbjct: 234 AYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVS 293
Query: 176 KNAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS----WNCLMGGFVKRKMLGAARKL 231
+N +++ L+ Y G +EEA +F+ + +L++ + LM G+ + + A ++
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 232 FDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLF----DQSPHQDVFTWTAMVSGYVQ 283
D M VR + N++I+GY + G + +A+ +F D S D T+ +V GY +
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 284 NGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMARELFEAMPSRNVSSWNTMITGY 343
G +DEA DQM QK E +P+ V ++N ++ GY
Sbjct: 414 AGYVDEALKLCDQMCQK-------------------------EVVPT--VMTYNILLKGY 446
Query: 344 GQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
+ G L+ MM +R D +S + ++ + G + EA+ ++ + G +
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEG 459
T + +S + + K+I V + AL Y+K G++ EA V E
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 460 IEEKDVVS----WNTMIAG-YARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAG 514
+E K + +NT+I+G + K A +V E ++ G+ P T +++ + G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE-LRARGLTPTVATYGALITGWCNIG 625
Query: 515 LIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
+ID+ + M + +T + + + + L R +++EA L++ +
Sbjct: 626 MIDKAYATCFEM-IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKI 672
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 146/319 (45%), Gaps = 44/319 (13%)
Query: 87 SYNAMISGYLRNARFSLARDLFDKMPQRDLVS----WNVMLTGYVRNRRLGDARRLFDSM 142
+Y A+ GY + A + + M ++ + +N +++G + R L L +
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 143 PQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAISWNGLLAAYVHNG-----R 193
+ V ++ A+++G+ G D+A ++M K I+ N + + + N +
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK-GITLNVNICSKIANSLFRLDK 661
Query: 194 IEEACRLFDSKSDWELI--------------SWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
I+EAC L D++L+ + CL + + + K K+ V +
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPK---KLLVPN 718
Query: 240 VVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF-----TWTAMVSGYVQNGMLDEARTFF 294
+ +N I+G + G + A+ LF D F T+T ++ G G +++A T
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR 778
Query: 295 DQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQN 346
D+M K N ++YNA++ G + +D A+ L +P + ++ ++NT+I G ++
Sbjct: 779 DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKS 838
Query: 347 GDIAQARKLFDMMPQRDCV 365
G++A+A +L + M ++ V
Sbjct: 839 GNVAEAMRLKEKMIEKGLV 857
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/606 (23%), Positives = 260/606 (42%), Gaps = 111/606 (18%)
Query: 57 WNKVISTHMRNGHCDSALRVFNTMPR----RSSVSYNAMISGYLR-NARFSL--ARDLFD 109
++ +S ++ G AL++F M R + ++ N ++ G +R + FS+ AR++FD
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 110 KMPQ----RDLVSWNVMLTGYVRNRRLGDARRLFDSMPQK-----DVVSWNAMLSGYAQN 160
M + ++ ++NV++ GY +L DA + + M + D V++N +L ++
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 161 GYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDW----ELISW 212
G + +E+ M N +++N L+ Y G ++EA ++ + +L ++
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 213 NCLMGGFVKRKMLGAARKLFDKMHV----RDVVSWNTMISGYAQDGDMSQAKNLFDQ--- 265
N L+ G + +L D M DVV++NT+I G + G +A+ L +Q
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 266 ---------------------------------------SPHQDVFTWTAMVSGYVQNGM 286
SP D+ T+ ++ Y++ G
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP--DIVTYHTLIKAYLKVGD 431
Query: 287 LDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNT 338
L A +M QK N I+ N ++ + K+D A L + R + ++ T
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 339 MITGYGQNGDIAQARKLFDMMPQRDCV----SWAAIISGYAQTGHYEEALNMFIEIKRDG 394
+I G+ + + +A +++D M + ++ ++I G G E A+ F E+ G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 395 ESLNRSTF-SCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEA 453
+ STF S L C + +E + + + +K ++ + N LL K G +A
Sbjct: 552 LLPDDSTFNSIILGYCKE-GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 454 NDVFEG-IEEK--DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSAC 510
+ F IEE+ D V++NTMI+ + + K+A + M+ G++PD T +S
Sbjct: 611 LNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 511 SHAG-------LIDRGTEYFYSMNKDYSV-------TPSSKH--------YTCMIDLLGR 548
G L+ + + F SM +D V T SK Y+ +ID L
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730
Query: 549 AGRLEE 554
GRL+E
Sbjct: 731 RGRLKE 736
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 249/556 (44%), Gaps = 51/556 (9%)
Query: 70 CDSALRV-FNTMPRRSSVSYNAMISGYLRNARFSLARDLFDKMP----QRDLVSWNVMLT 124
C+S L + P S ++ +S YL + +A +F KM + +L++ N +L
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI 174
Query: 125 GYVR---NRRLGDARRLFDSMPQ----KDVVSWNAMLSGYAQNGYADEAREVFYQM---- 173
G VR + + AR +FD M + +V ++N +++GY G ++A + +M
Sbjct: 175 GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 174 -PHKNAISWNGLLAAYVHNGRIEEACR-LFDSKSDWEL---ISWNCLMGGFVKRKMLGAA 228
+ + +++N +L A GR+ + L D K + + +++N L+ G+ K L A
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 229 RKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSG 280
++ + M + D+ ++N +I+G G M + L D DV T+ ++ G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 281 YVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMD-MARELFEAMP----SR 331
+ G+ EAR +QM + N++++N + + K + + R++ E + S
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 332 NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMF 387
++ +++T+I Y + GD++ A ++ M Q+ + ++ I+ + +EA N+
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 388 IEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMYFKC 447
+ G ++ T+ + +E ++ ++ K N+L+G
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 448 GSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITM 503
G A + F+ + E D ++N++I GY + G ++A + KPD T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 504 VGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMP 563
+L+ G+ ++ +F ++ ++ V + Y MI + +L+EA DL+ M
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEEREVDTVT--YNTMISAFCKDKKLKEAYDLLSEME 652
Query: 564 ---FEPPAASWGALLG 576
EP ++ + +
Sbjct: 653 EKGLEPDRFTYNSFIS 668
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 122/575 (21%), Positives = 242/575 (42%), Gaps = 54/575 (9%)
Query: 174 PHKNAISWNGLLAAYVHNGRIEEACRLFDS----KSDWELISWNCLMGGFVKRKM---LG 226
P + ++ L+AY+H G+ A ++F K L++ N L+ G V+ +
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 227 AARKLFDKMHVR-----DVVSWNTMISGYAQDGDMSQAKNLFDQ-----SPHQDVFTWTA 276
+AR++FD M V+ +V ++N +++GY +G + A + ++ + D T+
Sbjct: 187 SAREVFDDM-VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 277 MVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSRN 332
++ + G L + + M + N ++YN +V GY + + A ++ E M N
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 333 V----SSWNTMITGYGQNGDIAQARKLFDMMP----QRDCVSWAAIISGYAQTGHYEEAL 384
V ++N +I G G + + +L D M Q D V++ +I G + G EA
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 385 NMFIEIKRDGESLNRSTFSCALS-TCADIAALELGKQIHGQVVKTGYETGCFVGNALLGM 443
+ +++ DG N+ T + +L C + + +++ V G+ + L+
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 444 YFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPD 499
Y K G + A ++ + +K + ++ NT++ + +A + S G D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 500 EITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLE---EAQ 556
E+T ++ +++ E + M K +TP+ + +I L G+ E E
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKK-VKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 557 DLMRNMPFEPPAASWGALL----GASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLY 612
D + P +++ +++ R+ E ++ + FK P N +LL+ L
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK--PDNYTCNILLNGL- 601
Query: 613 AASGRWADAGNM-RSRMRDVGVQKVTGYSWVEVQNKIHKFTVGDCFHPEKDRIYAFLEEL 671
G A N + + + V VT + + K K E + + +EE
Sbjct: 602 CKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLK-------EAYDLLSEMEEK 654
Query: 672 DLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 706
L+ R Y S L++ D + E + +LK S K
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/561 (22%), Positives = 247/561 (44%), Gaps = 57/561 (10%)
Query: 86 VSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDS 141
VS + ++ Y++ + A + M +R ++ + N++L G RN G A L
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 142 MPQK----DVVSWNAMLSGYAQNGYADEAREVFYQMPHKNA----ISWNGLLAAYVHNGR 193
M + DV S+N ++ G+ + ++A E+ +M ++W L+ A+ G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 194 IEEACRLFDSKS----DWELISWNCLMGGFVKRKMLGAARKLFDKMHVRD----VVSWNT 245
++EA + +L+ + L+ GF L + LFD++ R +++NT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 246 MISGYAQDGDMSQAKNLFD----QSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN 301
+I G+ + G + +A +F+ + +V+T+T ++ G G EA + M +K+
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 302 E----ISYNAMVAGYVQSNKMDMARELFEAMPSRNVS----SWNTMITGYGQNGDIAQAR 353
E ++YN ++ + + A E+ E M R ++N ++ G GD+ +A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 354 KLFDMMPQR------DCVSWAAIISGYAQTGHYEEALNMF---IEIKRDGESLNRSTFSC 404
KL +M + D +S+ A+I G + +AL+++ +E G+ + +
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 405 ALSTCADI-AALELGKQIHGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIE-- 461
+ D+ A+EL KQI + +T A++ + K G + A + +
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTY----TAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 462 --EKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRG 519
+ V +N +++ + G QA +FE M+ PD ++ ++ AG I
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 520 TEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQ---DLMRNMPFEPPAASWGALLG 576
M++ ++P Y+ +I+ + G L+EA D M + FEP A ++L
Sbjct: 584 ESLLVGMSR-AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 577 ASRIHGNTELGEKAAEMVFKM 597
G T +K E+V K+
Sbjct: 643 YCISQGET---DKLTELVKKL 660
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 212/457 (46%), Gaps = 46/457 (10%)
Query: 54 LLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDLFD 109
L+ W +I + G D A+ M V Y ++I G+ + LFD
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 110 KMPQRD----LVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQNG 161
++ +R +++N ++ G+ + +L +A +F+ M ++ +V ++ ++ G G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 162 YADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFD----SKSDWELISWN 213
EA ++ M K NA+++N ++ +G + +A + + ++ + I++N
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 214 CLMGGFVKRKMLGAARKLFDKMHVR------DVVSWNTMISGYAQDGDMSQAKNLFDQSP 267
L+GG + L A KL M DV+S+N +I G ++ + QA +++D
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 268 HQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSNKMD 319
+ D T +++ ++ G +++A + Q+ +N +Y AM+ G+ ++ ++
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 320 MARELF------EAMPSRNVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAA 369
+A+ L E PS V +N +++ + G + QA +LF+ M + D VS+
Sbjct: 512 VAKGLLCKMRVSELQPS--VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 370 IISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTG 429
+I G + G + A ++ + + R G S + T+S ++ + L+ ++V +G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 430 YETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVV 466
+E + +++L G + ++ + + +KD+V
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 237/554 (42%), Gaps = 49/554 (8%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMI-----SGYLRNARFS 102
PD ++ +I+ H R G A+ + + M R S +YN +I SG R A
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA-LE 234
Query: 103 LARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSMP----QKDVVSWNAMLSGYA 158
+ + + D DLV+ N++L+ Y R+ A F+ M + D ++N ++ +
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 159 QNGYADEAREVFYQMPHKNA------ISWNGLLAAYVHNGRIEEACRLFDSKS----DWE 208
+ G + +A ++F M K A +++ ++ Y G IE +F++
Sbjct: 295 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 354
Query: 209 LISWNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLF- 263
++S+N LMG + M G A + + + DVVS+ +++ Y + +AK +F
Sbjct: 355 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 414
Query: 264 ---DQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQ----KNEISYNAMVAGYVQSN 316
+ +V T+ A++ Y NG L EA F QM Q N +S ++A +S
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Query: 317 KMDMARELFEAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWA 368
K + A SR N +++N+ I Y ++ +A L+ M ++ D V++
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 369 AIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKT 428
+ISG + Y EA++ E++ L + +S L + + + I Q+
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 429 GYETGCFVGNALLGMYFKCGSIGEANDVFEGIE----EKDVVSWNTMIAGYARHGFGKQA 484
G E ++L Y G+A ++F +E E D ++ + ++ + + G
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Query: 485 LMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMID 544
++ + M+ + + SAC+ R + M+ Y + S M+
Sbjct: 655 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD-PYLPSLSIGLTNQMLH 713
Query: 545 LLGRAGRLEEAQDL 558
L G++G++E L
Sbjct: 714 LFGKSGKVEAMMKL 727
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/519 (20%), Positives = 216/519 (41%), Gaps = 103/519 (19%)
Query: 150 WNAMLSGYAQNGYADEAREVFYQMP----HKNAISWNGLLAAYVHNGRIEEACRLFD--- 202
+N M+ +A++ + D+AR +F++M +A +++ L+ A+ G+ A L D
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 203 -------------------SKSDW-----------------ELISWNCLMGGFVKRKMLG 226
S +W +L++ N ++ + +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 227 AARKLFDKM---HVR-DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ------DVFTWTA 276
A F+ M VR D ++N +I ++ G SQA +LF+ + DV T+T+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 277 MVSGYVQNGMLDEARTFFDQMP----QKNEISYNAMVAGYVQSNKMDMARELFEAMPSR- 331
++ Y G ++ R F+ M + N +SYNA++ Y A + +
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 332 ---NVSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEAL 384
+V S+ ++ YG++ +A+++F MM + + V++ A+I Y G EA+
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 385 NMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFVGNALLGMY 444
+F ++++DG N + L+ C+ K+++ V + ++
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACS-----RSKKKVNVDTVLSAAQS------------ 488
Query: 445 FKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMV 504
GI + ++N+ I Y ++A+ +++SM+ VK D +T
Sbjct: 489 -------------RGI-NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 505 GVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPF 564
++S Y M +D S+ + + Y+ ++ + G++ EA+ + M
Sbjct: 535 ILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 593
Query: 565 ---EPPAASWGALLGASRIHGNTELGEKAAEMVFKMEPH 600
EP ++ ++L A + +E KA E+ +ME +
Sbjct: 594 AGCEPDVIAYTSMLHA---YNASEKWGKACELFLEMEAN 629
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 167/411 (40%), Gaps = 106/411 (25%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMP----RRSSVSYNAMISGYLRNARFSLARDL 107
PD++ + ++ + G ++ VF M + + VSYNA++ Y + A +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLSGYAQ 159
+ Q D+VS+ +L Y R+R+ G A+ +F M ++ +VV++NA++ Y
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 160 NGYADEAREVFYQMPHK---------------------------------------NAIS 180
NG+ EA E+F QM N +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 181 WNGLLAAYVHNGRIEEACRLFDS----KSDWELISWNCLMGGFVKRKMLGAARKLFDKMH 236
+N + +Y++ +E+A L+ S K + +++ L+ G + A +M
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 237 VRDVV----SWNTMISGYAQDGDMSQAKNLFDQSP----HQDVFTWTAMVSGYVQNGMLD 288
+ +++++ Y++ G +++A+++F+Q DV +T+M+ Y +
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 289 EARTFFDQMP----QKNEISYNAMVAGYVQSNK-------MDMARE------------LF 325
+A F +M + + I+ +A++ + + + MD+ RE +F
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIF 677
Query: 326 EA--------------------MPSRNVSSWNTMITGYGQNGDIAQARKLF 356
A +PS ++ N M+ +G++G + KLF
Sbjct: 678 SACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 728
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 143/644 (22%), Positives = 276/644 (42%), Gaps = 85/644 (13%)
Query: 85 SVSYNAMISGYLRNARFSLARDLFDKMPQR----DLVSWNVMLTGYV------RNRRLGD 134
+ ++N +I ++ AR+LFD+MP++ + ++ +++ GY + L +
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 135 ARRLFDSMPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVH 190
A F +P K V +N ++S + + G D++ ++ +M + + +++N ++A
Sbjct: 207 AMESFGVLPNK--VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 191 NGRIEEACRLFDSKSDWEL-----------ISWNCLMGGFVKRKMLGAARKLFDKMHVRD 239
G++ +A R+F SD EL I++N ++ GF K +L A+ LF+ + D
Sbjct: 265 EGKVLDASRIF---SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 240 ----VVSWNTMISGYAQDGDMSQA----KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 291
+ S+N + G + G +A K + D+ ++++ ++ G + GML +A+
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 292 TFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMITGY 343
T M + + ++Y ++ GY K+D A+ L + M N + N ++
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 344 GQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
+ G I++A +L M ++ D V+ I+ G +G ++A+ + ++ G
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG----- 496
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKTGYETGCF----VGNALLGMYFKCGSIGEAND 455
S AL LG G V + E C + LL K G EA +
Sbjct: 497 ---SAALGN--------LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 456 VF-EGIEEK---DVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACS 511
+F E + EK D V++N I + + G A V + M+ G T ++
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG-- 603
Query: 512 HAGLIDRGTEYFYSMN--KDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM---PFEP 566
G+ ++ E M+ K+ ++P+ Y I L ++E+A +L+ M P
Sbjct: 604 -LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 567 PAASWGALLGASRIHGNTELGEKAAEMVFKMEPHNSGMYVLLSNLYAASGRWADAGNMRS 626
S+ L+ A + ++ ++ E + G+Y L+ N A+G+ A +
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLE 722
Query: 627 RMRDVGVQKVTGY--SWVEVQNKIHKFTVGD-CFHPEKDRIYAF 667
+ D G + T VE K + V H DR Y F
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/509 (20%), Positives = 218/509 (42%), Gaps = 72/509 (14%)
Query: 100 RFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDSM------PQKDVVSWNAM 153
+F L R F + + + +N++L ++ RR+ L+ M PQ ++N +
Sbjct: 97 QFQLVRSRFPE-NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQ--TYTFNLL 153
Query: 154 LSGYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWEL 209
+ + D ARE+F +MP K N ++ L+ Y G ++ L ++ + +
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 210 IS----WNCLMGGFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKN 261
+ +N ++ F + + K+ +KM V D+V++N+ IS ++G + A
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 262 LFDQSPHQDVFTWTAMVSGYVQNGMLDEARTFFDQMPQKNEISYNAMVAGYVQSNKMDMA 321
+F LDE + +P+ N I+YN M+ G+ + ++ A
Sbjct: 274 IFSDME-------------------LDE----YLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 322 RELFEAMPSRN----VSSWNTMITGYGQNGDIAQARKLFDMMPQR----DCVSWAAIISG 373
+ LFE++ + + S+N + G ++G +A + M + S+ ++ G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 374 YAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETG 433
+ G +A + +KR+G + T+ C L + ++ K + ++++
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 434 CFVGNALLGMYFKCGSIGEANDVFEGIEEK----DVVSWNTMIAGYARHGFGKQALMVFE 489
+ N LL +K G I EA ++ + EK D V+ N ++ G G +A+ + +
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 490 SMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTCMIDLLGRA 549
M+ G +G L S+ GL+D + + P Y+ +++ L +A
Sbjct: 491 GMRVHGS-----AALGNLGN-SYIGLVDDSL-------IENNCLPDLITYSTLLNGLCKA 537
Query: 550 GRLEEAQDLMRNM---PFEPPAASWGALL 575
GR EA++L M +P + ++ +
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/584 (20%), Positives = 240/584 (41%), Gaps = 112/584 (19%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTM--------PRRSSVSYNAMISGYLRNARFSL 103
PD++ +N IS + G A R+F+ M PR +S++YN M+ G+ +
Sbjct: 250 PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLED 309
Query: 104 ARDLFDKMPQRD----LVSWNVMLTGYVRNRRLGDARRLFDSMPQK----DVVSWNAMLS 155
A+ LF+ + + D L S+N+ L G VR+ + +A + M K + S+N ++
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 156 GYAQNGYADEAREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLFDSKSDWELIS 211
G + G +A+ + M +A+++ LL Y G+++ A L E++
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ-----EMMR 424
Query: 212 WNCLMGGFV---------KRKMLGAARKLFDKMHVR----DVVSWNTMISGYAQDGDMSQ 258
NCL + K + A +L KM+ + D V+ N ++ G G++ +
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 259 A---------------------------KNLFDQSPHQDVFTWTAMVSGYVQNGMLDEAR 291
A +L + + D+ T++ +++G + G EA+
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 292 TFFDQM----PQKNEISYNAMVAGYVQSNKMDMARELFEAMPS----RNVSSWNTMITGY 343
F +M Q + ++YN + + + K+ A + + M +++ ++N++I G
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Query: 344 GQNGDIAQARKLFDMMPQR----DCVSWAAIISGYAQTGHYEEALNMFIEIKRDGESLNR 399
G I + L D M ++ + ++ I + E+A N+ E+ + + N
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 400 STFSCALSTCADIAALELGKQIHGQVVKT-GYETGCFVGNALLGMYFKCGSIGEANDVFE 458
+F + + ++ +++ V G + G + + + G + +A ++ E
Sbjct: 665 FSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY--SLMFNELLAAGQLLKATELLE 722
Query: 459 GIEEKDVVSWNTMIAGYARHGFGKQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDR 518
+ ++ G+ F + L+ ES+ K DE+ V S H +IDR
Sbjct: 723 AVLDR----------GFELGTFLYKDLV--ESL----CKKDELE---VASGILHK-MIDR 762
Query: 519 GTEYFYSMNKDYSVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNM 562
G Y P++ +ID LG+ G +EA M
Sbjct: 763 G----------YGFDPAA--LMPVIDGLGKMGNKKEANSFADKM 794
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 234/492 (47%), Gaps = 48/492 (9%)
Query: 58 NKVISTHMRNGHCDSALRVFNTMPRR----SSVSYNAMISGYLRNARFSLARDLFDKMPQ 113
N +I + +R G + A V+ + R + + N M++ ++ + ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 114 R----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKD----VVSWNAMLSGYAQNGYADE 165
+ D+V++N +++ Y + +A L ++MP K V ++N +++G ++G +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 166 AREVFYQMPHK----NAISWNGLLAAYVHNGRIEEACRLF-DSKSD---WELISWNCLMG 217
A+EVF +M ++ ++ LL G + E ++F D +S +L+ ++ +M
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 218 GFVKRKMLGAARKLFDKMH----VRDVVSWNTMISGYAQDGDMSQAKNLFDQSPHQ---- 269
F + L A F+ + + D V + +I GY + G +S A NL ++ Q
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 270 DVFTWTAMVSGYVQNGMLDEARTFFDQMPQK----NEISYNAMVAGYVQSNKMDMARELF 325
DV T+ ++ G + ML EA F++M ++ + + ++ G+ + + A ELF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 326 EAMPSR----NVSSWNTMITGYGQNGDIAQARKLFDMMPQRDC----VSWAAIISGYAQT 377
+ M + +V ++NT++ G+G+ GDI A++++ M ++ +S++ +++
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 378 GHYEEALNMFIE-IKRDGESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGYETGCFV 436
GH EA ++ E I ++ + S C A + G+ +++ G+ C
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD-GESFLEKMISEGFVPDCIS 622
Query: 437 GNALLGMYFKCGSIGEANDVFEGIEEK------DVVSWNTMIAGYARHGFGKQALMVFES 490
N L+ + + ++ +A + + +EE+ DV ++N+++ G+ R K+A +V
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 491 MKTIGVKPDEIT 502
M GV PD T
Sbjct: 683 MIERGVNPDRST 694
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 204/456 (44%), Gaps = 77/456 (16%)
Query: 52 PDLLKWNKVISTHMRNGHCDSALRVFNTMPRRS----SVSYNAMISGYLRNARFSLARDL 107
PD++ +N +IS + G + A + N MP + +YN +I+G ++ ++ A+++
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 108 FDKMPQR----DLVSWNVMLTGYVRNRRLGDARRLFDSMPQKDVVS----WNAMLSGYAQ 159
F +M + D ++ +L + + + ++F M +DVV +++M+S + +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 160 NGYADEAREVFYQMPHKNAIS----WNGLLAAYVHNGRIEEACRL----FDSKSDWELIS 211
+G D+A F + I + L+ Y G I A L ++++
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 212 WNCLMGGFVKRKMLGAARKLFDKMHVR--------------------------------- 238
+N ++ G KRKMLG A KLF++M R
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 239 ------DVVSWNTMISGYAQDGDMSQAKNLFDQSPHQDVF----TWTAMVSGYVQNGMLD 288
DVV++NT++ G+ + GD+ AK ++ +++ +++ +V+ G L
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 289 EARTFFDQMPQKN----EISYNAMVAGYVQSNKMDMARELFEAMPSR----NVSSWNTMI 340
EA +D+M KN + N+M+ GY +S E M S + S+NT+I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 341 TGYGQNGDIAQARKLFDMMPQR------DCVSWAAIISGYAQTGHYEEALNMFIEIKRDG 394
G+ + ++++A L M + D ++ +I+ G+ + +EA + ++ G
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 395 ESLNRSTFSCALSTCADIAALELGKQIHGQVVKTGY 430
+ +RST++C ++ L +IH ++++ G+
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 209/519 (40%), Gaps = 92/519 (17%)
Query: 82 RRSSVSYNAMISGYLRNARFSLARDLFDKMPQRDLVSWNVMLTGYVRNRRLGDARRLFDS 141
+ +S+S +AMI +R+ R S A+ +M +R +G R + F +
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRR---------SGVSRLEIVNSLDSTFSN 160
Query: 142 MPQKDVVSWNAMLSGYAQNGYADEAREVFYQMPHKNAI----SWNGLLAAYVHNGRIEEA 197
D V ++ ++ Y Q EA E F + K + N L+ + V G
Sbjct: 161 CGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG----- 214
Query: 198 CRLFDSKSDWELISWNCLMGGFVKRKMLGAARKLFDKMHVRDVVSWNTMISGYAQDGDMS 257
W ++W + R +G +V + N M++ +DG M
Sbjct: 215 ---------WVELAWGVYQE--ISRSGVGI-----------NVYTLNIMVNALCKDGKME 252
Query: 258 QAKNLFDQSPHQ----DVFTWTAMVSGYVQNGMLDEARTFFDQMPQKN----EISYNAMV 309
+ Q + D+ T+ ++S Y G+++EA + MP K +YN ++
Sbjct: 253 KVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 310 AGYVQSNKMDMARELFEAMP----SRNVSSWNTMITGYGQNGDIAQARKLFDMMPQRDCV 365
G + K + A+E+F M S + +++ +++ + GD+ + K+F M RD V
Sbjct: 313 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Query: 366 S----WAAIISGYAQTGHYEEALNMFIEIKRDGESLNRSTFSCALSTCADIAALELGKQI 421
+++++S + ++G+ ++AL F +K G + ++
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT------------------ 414
Query: 422 HGQVVKTGYETGCFVGNALLGMYFKCGSIGEANDVFEGIEEKDVVSWNTMIAGYARHGFG 481
++ GY C G + M + N++ + DVV++NT++ G +
Sbjct: 415 ---ILIQGY---CRKGMISVAMNLR-------NEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 482 KQALMVFESMKTIGVKPDEITMVGVLSACSHAGLIDRGTEYFYSMNKDYSVTPSSKHYTC 541
+A +F M + PD T+ ++ G + E F M K+ + Y
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNT 520
Query: 542 MIDLLGRAGRLEEAQDL---MRNMPFEPPAASWGALLGA 577
++D G+ G ++ A+++ M + P S+ L+ A
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559