Miyakogusa Predicted Gene

Lj4g3v3114590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114590.1 Non Chatacterized Hit- tr|F6HKL7|F6HKL7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,47.93,2e-19,no
description,Thioredoxin-like fold; seg,NULL;
GLUTAREDOXIN_2,Glutaredoxin; GLUTAREDOXIN
DOMAIN-CON,NODE_77829_length_676_cov_9.853550.path2.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10630.1 | Symbols:  | Glutaredoxin family protein | chr4:656...   107   3e-24
AT5G06470.1 | Symbols:  | Glutaredoxin family protein | chr5:197...    95   1e-20
AT1G32760.1 | Symbols:  | Glutaredoxin family protein | chr1:118...    90   3e-19
AT5G39865.1 | Symbols:  | Glutaredoxin family protein | chr5:159...    82   7e-17
AT1G64500.1 | Symbols:  | Glutaredoxin family protein | chr1:239...    75   9e-15
AT5G58530.1 | Symbols:  | Glutaredoxin family protein | chr5:236...    74   2e-14
AT3G28850.1 | Symbols:  | Glutaredoxin family protein | chr3:108...    72   7e-14
AT3G57070.1 | Symbols:  | Glutaredoxin family protein | chr3:211...    72   1e-13
AT5G13810.1 | Symbols:  | Glutaredoxin family protein | chr5:445...    69   5e-13
AT5G03870.1 | Symbols:  | Glutaredoxin family protein | chr5:103...    68   2e-12
AT2G41330.1 | Symbols:  | Glutaredoxin family protein | chr2:172...    65   1e-11
AT3G11773.2 | Symbols:  | Thioredoxin superfamily protein | chr3...    63   4e-11
AT3G11773.1 | Symbols:  | Thioredoxin superfamily protein | chr3...    62   9e-11
AT5G01420.1 | Symbols:  | Glutaredoxin family protein | chr5:174...    57   3e-09

>AT4G10630.1 | Symbols:  | Glutaredoxin family protein |
           chr4:6566625-6567629 REVERSE LENGTH=334
          Length = 334

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 9/125 (7%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MD  F+EEL  L   +  D  +   +PP+VFVKG YIGG EE+L++             P
Sbjct: 216 MDRRFREELVSLMAKRVGDEGVA-ALPPRVFVKGRYIGGGEEVLRLVEEGSFGELISGIP 274

Query: 61  RKPVVG---AVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVL 117
           RK   G     C+GCG L FLPCF CNGSCK+VK        + ++VV+CN+CNENGLV 
Sbjct: 275 RKKAGGCESGACDGCGGLFFLPCFRCNGSCKMVKGW-----GSASVVVRCNECNENGLVP 329

Query: 118 CPVCS 122
           CP+CS
Sbjct: 330 CPICS 334


>AT5G06470.1 | Symbols:  | Glutaredoxin family protein |
           chr5:1974659-1975378 REVERSE LENGTH=239
          Length = 239

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 11/122 (9%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MDS F+EE+  L  GK        V  P++F++G YIGGAEE++ +              
Sbjct: 129 MDSEFREEMWRLLGGK--------VTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQGIS 180

Query: 61  RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCPV 120
           +   V + CE C + RFL C SCNGS +++  H ++E S  N+  +C +CNENGLV CP+
Sbjct: 181 Q---VDSPCESCENERFLICSSCNGSTRLLAEHHDEESSNDNMWTRCRECNENGLVKCPL 237

Query: 121 CS 122
           C+
Sbjct: 238 CT 239


>AT1G32760.1 | Symbols:  | Glutaredoxin family protein |
           chr1:11858251-11859195 FORWARD LENGTH=314
          Length = 314

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 72/123 (58%), Gaps = 10/123 (8%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MD GF+EEL  L   +    S   V+PP+VFVKG YIGGAEE++++             P
Sbjct: 201 MDRGFREELSNLMAVE----STAAVLPPRVFVKGKYIGGAEEVMRLVEEGLLGELLKEIP 256

Query: 61  RK-PVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCP 119
           RK    G  C GCG L FLPC  CNGSCK+V+           +VVKC +CNENGLV CP
Sbjct: 257 RKKDRCGGGCGGCGGLAFLPCSGCNGSCKVVEGW-----GNDAVVVKCKECNENGLVRCP 311

Query: 120 VCS 122
           +CS
Sbjct: 312 ICS 314


>AT5G39865.1 | Symbols:  | Glutaredoxin family protein |
           chr5:15965560-15966732 REVERSE LENGTH=390
          Length = 390

 Score = 82.4 bits (202), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 7/126 (5%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXX-- 58
           M SGFK+EL+ L +GK  +     +  P+VF+   Y+GG EE+ K+              
Sbjct: 265 MHSGFKDELKKLLEGKFNNG--VGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCE 322

Query: 59  --XPRKPVVGAVCEGCGDLRFLPCFSCNGSCKIV-KAHKEKEGSTRNIVVKCNDCNENGL 115
                 P  G  CE CGD+RF+PC +C+GSCK+  +  +E EG T     +C  CNENGL
Sbjct: 323 MVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGL 382

Query: 116 VLCPVC 121
           + C VC
Sbjct: 383 IRCHVC 388


>AT1G64500.1 | Symbols:  | Glutaredoxin family protein |
           chr1:23953270-23954376 FORWARD LENGTH=368
          Length = 368

 Score = 75.5 bits (184), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 15/125 (12%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           +D+G   EL+ L + +        V PP+VFVKG Y+GGA E+  +              
Sbjct: 252 LDAGVLSELKELLQDEAS------VAPPRVFVKGRYLGGAAEVTAMNENGKLGRVLRWA- 304

Query: 61  RKPVVGA----VCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLV 116
           R   VG      CEGCG  R+LPCF C GSCK+      K         +C  CNENGL+
Sbjct: 305 RVERVGEEGRLTCEGCGGARWLPCFECGGSCKVAAVGAAKGERWE----RCVKCNENGLI 360

Query: 117 LCPVC 121
            CPVC
Sbjct: 361 RCPVC 365


>AT5G58530.1 | Symbols:  | Glutaredoxin family protein |
           chr5:23660428-23661249 FORWARD LENGTH=273
          Length = 273

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 64/125 (51%), Gaps = 14/125 (11%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPK---VFVKGFYIGGAEEMLKVAXXXXXXXXXX 57
           MD+ F  EL+ +F GK ++ +      PK   VF+ G YIGGAEE+ ++           
Sbjct: 153 MDASFSTELQRIF-GKDQNQNQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQ 211

Query: 58  XXPRKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVL 117
             P+  +   VCE CG  RF+PC  C+GS K+   H EK G        C  CNENGLV 
Sbjct: 212 ELPK--IEPGVCEMCGGHRFVPCKDCHGSHKV---HTEKLG-----FRTCLTCNENGLVR 261

Query: 118 CPVCS 122
           C  CS
Sbjct: 262 CSSCS 266


>AT3G28850.1 | Symbols:  | Glutaredoxin family protein |
           chr3:10848669-10849955 FORWARD LENGTH=428
          Length = 428

 Score = 72.4 bits (176), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 70/145 (48%), Gaps = 33/145 (22%)

Query: 1   MDSGFKEELRMLFKGK-GKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXX 59
           M SGFK+EL+ L   K  K   +T+   P+VF+   YIGGAEE+ K+             
Sbjct: 291 MHSGFKDELKELLGEKFNKGVGITL---PRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGC 347

Query: 60  PR----KPVVGAVCEGCGDLRFLPCFSCNGSCKI-------------------VKAHKEK 96
            R    +   G  CE CGD+RF+PC +C+GSCK+                   VK  +E 
Sbjct: 348 ERVEENQNGNGLECEACGDVRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREY 407

Query: 97  EGSTRNIVVKCNDCNENGLVLCPVC 121
              T      C DCNENGL+ CPVC
Sbjct: 408 GFQT------CPDCNENGLIRCPVC 426


>AT3G57070.1 | Symbols:  | Glutaredoxin family protein |
           chr3:21124174-21125427 FORWARD LENGTH=417
          Length = 417

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MDS +++EL+ +     K   +     P+VF++G +IGG EE++++             P
Sbjct: 308 MDSKYRKELQSVLGAAEKPVCL-----PQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFP 362

Query: 61  RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCPV 120
               +G  C  CGD RF+PC +C+GS K+ +   E+         +C  CNENGLV C V
Sbjct: 363 ACERLG-TCRSCGDARFVPCTNCDGSTKVFEEQDER-------FKRCPKCNENGLVRCRV 414

Query: 121 C 121
           C
Sbjct: 415 C 415


>AT5G13810.1 | Symbols:  | Glutaredoxin family protein |
           chr5:4455769-4456593 FORWARD LENGTH=274
          Length = 274

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 17/123 (13%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MD  +++EL++    K        V  P+VF+ G Y+GGA+ +  +             P
Sbjct: 167 MDIAYRKELQIAMGEKS-------VSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFP 219

Query: 61  -RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCP 119
            R+P  G VC  CGD+RF+PC +C+GS K+    +++       V +C +CNENGL+ CP
Sbjct: 220 MRQP--GFVCHCCGDIRFVPCSNCSGSKKLFDEDEDR-------VKRCPECNENGLIRCP 270

Query: 120 VCS 122
            CS
Sbjct: 271 DCS 273


>AT5G03870.1 | Symbols:  | Glutaredoxin family protein |
           chr5:1035813-1036967 REVERSE LENGTH=384
          Length = 384

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 14/122 (11%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           M S FKEE+R +   K        V  P VFVKG  +G  EE++++             P
Sbjct: 277 MHSVFKEEIRGIMGTKH-------VKIPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIP 329

Query: 61  RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCPV 120
              + G+ C GCG +RF+ C  CNGSCK+ +  K+        +VKC  CNENGLVLCP+
Sbjct: 330 AARLGGSCCRGCGGMRFMMCVVCNGSCKVREEEKKS-------MVKCLKCNENGLVLCPI 382

Query: 121 CS 122
           CS
Sbjct: 383 CS 384


>AT2G41330.1 | Symbols:  | Glutaredoxin family protein |
           chr2:17227067-17228275 FORWARD LENGTH=402
          Length = 402

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 14/121 (11%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MDS +++EL+      G++  + +   P+VF++G  IGG EE+  +             P
Sbjct: 294 MDSKYRKELQNAL---GEEKPVCL---PQVFIRGVRIGGIEEIKILNDGGELAEMLKDFP 347

Query: 61  RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCPV 120
               +GA C+ CGD RF+PC +C GS K+ +  ++++G  R     CN CNENGLV C  
Sbjct: 348 ACESIGA-CDSCGDARFVPCTNCGGSTKVFE--EQEDGFKR-----CNGCNENGLVRCNK 399

Query: 121 C 121
           C
Sbjct: 400 C 400


>AT3G11773.2 | Symbols:  | Thioredoxin superfamily protein |
           chr3:3722989-3723659 REVERSE LENGTH=200
          Length = 200

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 18/122 (14%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MD  +KEE+  L   +        V PP++F+K  YIGGA+E+  V+             
Sbjct: 97  MDCEYKEEMWRLLGEQ--------VTPPRLFIKCKYIGGADEV--VSLNENEKLKKLLEV 146

Query: 61  RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCPV 120
                   CE C + RFL C  CNG  ++V  H+           +C +CNENGLV C +
Sbjct: 147 FSSAKSRQCEMCENERFLICSKCNGRSRVVAEHE--------TWKRCIECNENGLVKCAL 198

Query: 121 CS 122
           C+
Sbjct: 199 CT 200


>AT3G11773.1 | Symbols:  | Thioredoxin superfamily protein |
           chr3:3722989-3723441 REVERSE LENGTH=150
          Length = 150

 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           MD  +KEE+  L   +        V PP++F+K  YIGGA+E++ +              
Sbjct: 47  MDCEYKEEMWRLLGEQ--------VTPPRLFIKCKYIGGADEVVSLNENEKLKKLLEVFS 98

Query: 61  RKPVVGAVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCPV 120
                   CE C + RFL C  CNG  ++V  H+           +C +CNENGLV C +
Sbjct: 99  --SAKSRQCEMCENERFLICSKCNGRSRVVAEHE--------TWKRCIECNENGLVKCAL 148

Query: 121 CS 122
           C+
Sbjct: 149 CT 150


>AT5G01420.1 | Symbols:  | Glutaredoxin family protein |
           chr5:174886-176091 REVERSE LENGTH=401
          Length = 401

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 18/123 (14%)

Query: 1   MDSGFKEELRMLFKGKGKDASMTMVVPPKVFVKGFYIGGAEEMLKVAXXXXXXXXXXXXP 60
           M   ++EELR +       A+ T V+PP +FVKG  IGGA+ +L +              
Sbjct: 296 MHREYREELRRI------SAAETEVLPPVLFVKGRCIGGAQRVLGLHEQGKFKILFEGI- 348

Query: 61  RKPVVG-AVCEGCGDLRFLPCFSCNGSCKIVKAHKEKEGSTRNIVVKCNDCNENGLVLCP 119
             P+ G   C  C   RFL C  C GS +I+      +GS     ++C  CNENGL++C 
Sbjct: 349 --PITGDERCRRCDGFRFLMCDGCRGSRRIISG----DGSR----IQCLICNENGLIVCV 398

Query: 120 VCS 122
            CS
Sbjct: 399 GCS 401