Miyakogusa Predicted Gene
- Lj4g3v3114540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3114540.1 Non Chatacterized Hit- tr|I1KQI6|I1KQI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50933 PE,90.16,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing
doma,NODE_9574_length_2337_cov_147.937958.path2.1
(610 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18060.1 | Symbols: | transducin family protein / WD-40 repe... 961 0.0
AT2G01330.2 | Symbols: | nucleotide binding | chr2:158417-16075... 859 0.0
AT2G01330.1 | Symbols: | nucleotide binding | chr2:158417-16075... 859 0.0
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 69 8e-12
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 68 2e-11
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 65 1e-10
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 61 3e-09
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 61 3e-09
AT2G32700.7 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 60 7e-09
AT2G32700.2 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 59 8e-09
AT2G32700.1 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 59 8e-09
AT2G32700.4 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 59 8e-09
AT2G32700.5 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 59 8e-09
AT2G32700.3 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 59 8e-09
AT2G32700.6 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 59 9e-09
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 59 1e-08
AT3G15980.1 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 59 1e-08
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 58 1e-08
AT3G15980.4 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 58 2e-08
AT3G15980.3 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 58 2e-08
AT3G15980.2 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 58 2e-08
AT3G15980.5 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 58 2e-08
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 58 2e-08
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 2e-08
AT5G43920.1 | Symbols: | transducin family protein / WD-40 repe... 58 2e-08
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 57 3e-08
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 4e-08
AT2G20330.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 5e-08
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 57 5e-08
AT4G32551.2 | Symbols: LUG | LisH dimerisation motif;WD40/YVTN r... 56 6e-08
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 56 6e-08
AT4G32551.1 | Symbols: LUG, RON2 | LisH dimerisation motif;WD40/... 56 8e-08
AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 ... 56 8e-08
AT1G10580.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 1e-07
AT1G79990.1 | Symbols: | structural molecules | chr1:30084522-3... 55 1e-07
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 2e-07
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 2e-07
AT1G79990.5 | Symbols: | structural molecules | chr1:30085910-3... 54 3e-07
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 54 3e-07
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 4e-07
AT4G32990.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 5e-07
AT3G42660.1 | Symbols: | transducin family protein / WD-40 repe... 53 7e-07
AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kina... 53 8e-07
AT2G26060.2 | Symbols: emb1345 | Transducin/WD40 repeat-like sup... 52 9e-07
AT2G26060.1 | Symbols: emb1345 | Transducin/WD40 repeat-like sup... 52 1e-06
AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kina... 52 1e-06
AT1G18080.1 | Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD... 52 1e-06
AT3G13340.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT3G13340.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G49540.2 | Symbols: ELP2, AtELP2 | elongator protein 2 | chr1... 51 2e-06
AT1G49540.1 | Symbols: ELP2, AtELP2 | elongator protein 2 | chr1... 51 3e-06
AT4G38480.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 3e-06
AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA ... 51 3e-06
AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA ... 51 3e-06
AT5G56190.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 6e-06
AT3G18140.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 6e-06
AT5G56190.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 6e-06
AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-... 49 9e-06
AT1G55680.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 9e-06
AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-... 49 1e-05
>AT3G18060.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6183880-6186788 FORWARD LENGTH=609
Length = 609
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/606 (75%), Positives = 530/606 (87%), Gaps = 1/606 (0%)
Query: 4 ELVETYSCMPSTERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATV 63
EL ETY+C+PSTERGRGILISG+ KS+++LYTNGRSVV ++L NPL+VS+YGEHAYPATV
Sbjct: 2 ELSETYACVPSTERGRGILISGNSKSDTILYTNGRSVVTLDLNNPLKVSIYGEHAYPATV 61
Query: 64 ARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAK 123
AR+SPNGEW+AS D SGTVRIWG ND VLK EF+VL+GRIDDLQWS DG+RIVA GD K
Sbjct: 62 ARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGK 121
Query: 124 GKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQ 183
GKS VRAFMWDSG+NVGEFDGHSRRVLSCA KPTRPFRIVTCGEDFLVNFYEGPPF+FK
Sbjct: 122 GKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFKL 181
Query: 184 SHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
S R+HSNFVNCVR++PDGSKF++V SDK+GII+DGK+ E +GELSS+ GH GSIYAVSWS
Sbjct: 182 SSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWS 241
Query: 244 PDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGS-GGVEDMLVGCLWLNEYIVAVSL 302
PDGKQVLTVSADKSAK+WDIS++ +G + TL CPGS GGV+DMLVGCLW N++IV VSL
Sbjct: 242 PDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVSL 301
Query: 303 GGTISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKWIQGIGYSGK 362
GGTISIF +SDLDK+P FSGHMKNVSSL +LK N +LS SYDGLI KW+ G G+ GK
Sbjct: 302 GGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGK 361
Query: 363 LHRKENCQIKCLAAVEDEIITSGFDNKIWRVSLHGDQCGDAEAIDIGNQPKDFSVALLSP 422
L R +N QIKC AA E+EI+TSG+DNKI R+S DQC + E+IDIGNQPKD S+A LSP
Sbjct: 362 LQRTQNSQIKCFAAHEEEIVTSGYDNKISRISYKDDQCTNEESIDIGNQPKDLSLAPLSP 421
Query: 423 ELALVSIDSGVVVLRGTKIVSTINLGFTVSATAVSPDGSEAIIGGQDGKLHIYSISGDTF 482
+L LV+ +SGVV LR K+VSTINLGF V+A AV+PDG+EA+IGGQDGKLH+YSI+GD+
Sbjct: 422 DLLLVTFESGVVFLRDGKVVSTINLGFIVTALAVTPDGTEAVIGGQDGKLHLYSINGDSL 481
Query: 483 EEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKLKNMLYHSARINCLA 542
EEAVLE+HRGAISVIRYSPD SMFAS D+NREAVVWDR SR++KLKNMLYHSARINCLA
Sbjct: 482 TEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLA 541
Query: 543 WSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSSGEDAFI 602
WSP+S +ATGSLDTCVI+YE+D+PASSR+TIKGAHLGGVYGL F+D+ +VSSGEDA I
Sbjct: 542 WSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSHVVSSGEDACI 601
Query: 603 RVWKIT 608
RVW T
Sbjct: 602 RVWSFT 607
>AT2G01330.2 | Symbols: | nucleotide binding | chr2:158417-160755
REVERSE LENGTH=611
Length = 611
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/607 (66%), Positives = 501/607 (82%), Gaps = 4/607 (0%)
Query: 4 ELVETYSCMPSTERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATV 63
+L+ET+ C+PSTERGRGILISGD KS+++LY NGRSV I +L+ V VYGEH Y TV
Sbjct: 3 KLLETFPCVPSTERGRGILISGDSKSDTILYCNGRSVFIRSLRQLQDVQVYGEHGYAVTV 62
Query: 64 ARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAK 123
AR+SPNGEW+ASAD SGTVR+WGT N FVLK EFRVL+GR+DDLQWS DGLRIVA GD K
Sbjct: 63 ARYSPNGEWIASADVSGTVRVWGTHNGFVLKNEFRVLAGRVDDLQWSFDGLRIVASGDGK 122
Query: 124 GKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQ 183
GKS VR+F WDSG +G+FDGHSRRVLSCA+KPTRPFRI TCGEDFLVNFY+GPPF+F
Sbjct: 123 GKSLVRSFAWDSGNTMGDFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHS 182
Query: 184 SHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
SHR+HSNFVNC+RYSPDG+KF++V SDK+G+I+DGK+G+K+GEL+SE GH GSIYAVSWS
Sbjct: 183 SHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWS 242
Query: 244 PDGKQVLTVSADKSAKVWDISEDNN-GKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSL 302
PD K+VLTVSADKSAKVW+++ED G V KTL+ SGG EDMLVGCLW N++++ VSL
Sbjct: 243 PDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDHLITVSL 302
Query: 303 GGTISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKWIQGIGYSGK 362
GGT+S+F + D+DK P SGH+KNV+SL +L N + +LS SYDGLIVKW++G+GYS K
Sbjct: 303 GGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKWLKGVGYSCK 362
Query: 363 LHRKENCQIKCLAAVEDEIITSGFDNKIWRVSLHGDQCGDAEAIDIGNQPKDFSVALLSP 422
L K+ +IK LAA E I SG+DN +WR+ L + G AE +DIG+QP D S+A+ SP
Sbjct: 363 LQMKDT-KIKRLAATESSIFISGYDNMVWRIPLTDNGYGAAEHVDIGHQPLDISIAVDSP 421
Query: 423 E-LALVSIDSGVVVLRGTKIVSTINLGFTVSATAVSPDGSEAIIGGQDGKLHIYSISGD- 480
E ALVS DSGVV+L G I+S I+LGF V+A+ +SPDG EAI+GGQDGKLHIYS+SGD
Sbjct: 422 EATALVSFDSGVVLLNGLNILSKIDLGFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDN 481
Query: 481 TFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKLKNMLYHSARINC 540
+EEAVLEKHRGA++VIRYSPD +MFASGD NREAVVWDR ++ VKL NML+H+ARIN
Sbjct: 482 NLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINS 541
Query: 541 LAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSSGEDA 600
LAWSP+++ +ATGS+DTCVI+YE+D+PASSR+T + AHLGGV + F D+ ++ SSGEDA
Sbjct: 542 LAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSGEDA 601
Query: 601 FIRVWKI 607
+R+W I
Sbjct: 602 SVRLWHI 608
>AT2G01330.1 | Symbols: | nucleotide binding | chr2:158417-160755
REVERSE LENGTH=611
Length = 611
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/607 (66%), Positives = 501/607 (82%), Gaps = 4/607 (0%)
Query: 4 ELVETYSCMPSTERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATV 63
+L+ET+ C+PSTERGRGILISGD KS+++LY NGRSV I +L+ V VYGEH Y TV
Sbjct: 3 KLLETFPCVPSTERGRGILISGDSKSDTILYCNGRSVFIRSLRQLQDVQVYGEHGYAVTV 62
Query: 64 ARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAK 123
AR+SPNGEW+ASAD SGTVR+WGT N FVLK EFRVL+GR+DDLQWS DGLRIVA GD K
Sbjct: 63 ARYSPNGEWIASADVSGTVRVWGTHNGFVLKNEFRVLAGRVDDLQWSFDGLRIVASGDGK 122
Query: 124 GKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQ 183
GKS VR+F WDSG +G+FDGHSRRVLSCA+KPTRPFRI TCGEDFLVNFY+GPPF+F
Sbjct: 123 GKSLVRSFAWDSGNTMGDFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHS 182
Query: 184 SHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
SHR+HSNFVNC+RYSPDG+KF++V SDK+G+I+DGK+G+K+GEL+SE GH GSIYAVSWS
Sbjct: 183 SHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWS 242
Query: 244 PDGKQVLTVSADKSAKVWDISEDNN-GKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSL 302
PD K+VLTVSADKSAKVW+++ED G V KTL+ SGG EDMLVGCLW N++++ VSL
Sbjct: 243 PDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDHLITVSL 302
Query: 303 GGTISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKWIQGIGYSGK 362
GGT+S+F + D+DK P SGH+KNV+SL +L N + +LS SYDGLIVKW++G+GYS K
Sbjct: 303 GGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKWLKGVGYSCK 362
Query: 363 LHRKENCQIKCLAAVEDEIITSGFDNKIWRVSLHGDQCGDAEAIDIGNQPKDFSVALLSP 422
L K+ +IK LAA E I SG+DN +WR+ L + G AE +DIG+QP D S+A+ SP
Sbjct: 363 LQMKDT-KIKRLAATESSIFISGYDNMVWRIPLTDNGYGAAEHVDIGHQPLDISIAVDSP 421
Query: 423 E-LALVSIDSGVVVLRGTKIVSTINLGFTVSATAVSPDGSEAIIGGQDGKLHIYSISGD- 480
E ALVS DSGVV+L G I+S I+LGF V+A+ +SPDG EAI+GGQDGKLHIYS+SGD
Sbjct: 422 EATALVSFDSGVVLLNGLNILSKIDLGFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDN 481
Query: 481 TFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKLKNMLYHSARINC 540
+EEAVLEKHRGA++VIRYSPD +MFASGD NREAVVWDR ++ VKL NML+H+ARIN
Sbjct: 482 NLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINS 541
Query: 541 LAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSSGEDA 600
LAWSP+++ +ATGS+DTCVI+YE+D+PASSR+T + AHLGGV + F D+ ++ SSGEDA
Sbjct: 542 LAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSGEDA 601
Query: 601 FIRVWKI 607
+R+W I
Sbjct: 602 SVRLWHI 608
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 44 NLQNPLQVSVYGEHAYPATV--ARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLS 101
N + L+ + +P+ V +F+P G +AS + +W D K F VL
Sbjct: 37 NRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDC---KNFMVLK 93
Query: 102 GR---IDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTR 158
G I DL W+ DG +IV+ K VRA+ ++G + + HS V SC PTR
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDK---TVRAWDVETGKQIKKMAEHSSFVNSCC--PTR 148
Query: 159 --PFRIVTCGEDFLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIF 216
P I++ +D ++ Q+ D + V +S K + G D ++
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVW 207
Query: 217 DGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDI 263
D + GE L GH +I +S SPDG +LT D VWD+
Sbjct: 208 DLRKGEATMTLE---GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 422 PELALVSIDSGVVVL---RGTKIVSTINLGFTVSATAVSPDGSEAIIGGQDGKLHIYSIS 478
P L + D G L R + T + ++A + S + GG D + ++ +
Sbjct: 151 PPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 479 GDTFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDR-----ASRDVKLKNMLY 533
E LE H+ I+ + SPD S + ++ + VWD +R VK+
Sbjct: 211 KG--EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQ 268
Query: 534 HSARINCL--AWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKG--AHLGGVYGLVFSD 589
H+ N L +WSPD ++ GS D V I++ +SR TI H G V VF
Sbjct: 269 HNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD----TTSRRTIYKLPGHTGSVNECVFHP 324
Query: 590 EFSLVSS 596
++ S
Sbjct: 325 TEPIIGS 331
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 97/239 (40%), Gaps = 58/239 (24%)
Query: 67 SPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGR---IDDLQWSPDGLRIVACGDAK 123
SP +V S+ G RIW D LKK LSG + ++W DG+ D
Sbjct: 209 SPCRRFVTSS-KDGDARIW----DITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCT 263
Query: 124 GKSFVRAFMWDS--GTNVGEFDGHSRRVLSCA------------------YKPTR----- 158
K MW++ G + E GH + S A Y P
Sbjct: 264 IK------MWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKA 317
Query: 159 -----------PFRIVTCGEDFLVNFYEGPPFRFKQSHRD---HSNFVNCVRYSPDGSKF 204
P R+V+ +DF + +E P KQ + H VN V +SPDG
Sbjct: 318 LERYNKTKGDSPERLVSGSDDFTMFLWE--PSVSKQPKKRLTGHQQLVNHVYFSPDGKWI 375
Query: 205 LSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDI 263
S DK +++G +G+ + GH G +Y VSWS D + +L+ S D + K+W+I
Sbjct: 376 ASASFDKSVRLWNGITGQFVTVFR---GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 23/242 (9%)
Query: 51 VSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWS 110
+S +H P +++ G+++ + T +W + + K++F SG D+ W
Sbjct: 358 ISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-EWKQQFEFHSGPTLDVDWR 416
Query: 111 PDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFL 170
+ V+ + S + F GH V + PT + +C +D
Sbjct: 417 NN----VSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSL-LASCSDDST 471
Query: 171 VNFYEGPPFRFKQSHRDHSNFVNCVRYSPDG------SKFLSVGS---DKRGIIFDGKSG 221
+ F R+H+ + +R+SP G +K L++ S D ++D + G
Sbjct: 472 AKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELG 531
Query: 222 EKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSG 281
+ L S GH +Y++++SP+G+ + + S DKS +W I E GK+ KT T G+G
Sbjct: 532 KM---LCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE---GKIVKTYT--GNG 583
Query: 282 GV 283
G+
Sbjct: 584 GI 585
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 55/197 (27%)
Query: 459 DGSEAIIGGQDGKLHIYSISGDTFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVV 518
+G+ G DG+ I++++G+ + L KH+G I ++++ +G V+R AVV
Sbjct: 335 EGTLLATGSCDGQARIWTLNGELI---STLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVV 391
Query: 519 WDRASR--------------DVKLKN-----------MLY---------------HSARI 538
WD + DV +N M+Y H +
Sbjct: 392 WDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEV 451
Query: 539 NCLAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFS---------- 588
NC+ W P +A+ S D+ I+ I Q S+ V H +Y + +S
Sbjct: 452 NCVKWDPTGSLLASCSDDSTAKIWNIKQ--STFVHDLREHTKEIYTIRWSPTGPGTNNPN 509
Query: 589 DEFSLVSSGEDAFIRVW 605
+ +L S+ D+ +++W
Sbjct: 510 KQLTLASASFDSTVKLW 526
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 65 RFSPNGEWVASAD-SSGTVRIWGTRN------------------DFVLKKEFRVLSGRID 105
+F P G +A A SS +V++W T + D K+F VLS
Sbjct: 109 QFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKF-VLS---- 163
Query: 106 DLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTC 165
+ WSP+G R+ ACG G V F D + + +GH+ V S + P P + +
Sbjct: 164 -VAWSPNGKRL-ACGSMDGTICV--FDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSG 219
Query: 166 GEDFLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIG 225
+D VN ++ S H+++V V SPDG + SD+ ++D K I
Sbjct: 220 SDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQ 279
Query: 226 ELSSEGGHTGSIYAVSWSPDG------KQVLTVSADKSAKVWDIS 264
+S+ H +++V++ P G ++ +VS DKS ++D S
Sbjct: 280 TMSN---HNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 466 GGQDGKLHIYSISGDTFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRD 525
G G + IY + LE H AIS +++S D ++ AS V++ ++W +
Sbjct: 21 AGTSGNVPIYK----PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
Query: 526 VKLKNMLYHSARINCLAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGL 585
+ + HS+ I+ LAWS DS + S D + I++ P ++G H V+ +
Sbjct: 77 L-IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRG-HTNFVFCV 134
Query: 586 VFSDEFSLVSSGE-DAFIRVWKI 607
F+ +L+ SG D IR+W++
Sbjct: 135 NFNPPSNLIVSGSFDETIRIWEV 157
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 147/330 (44%), Gaps = 39/330 (11%)
Query: 73 VASADSSGTVRIWGTRNDFVLKKEFRVL------SGRIDDLQWSPDGLRIVACGDAKGKS 126
VA+A+S+G GT + + K +R L + I +++S DG + + K
Sbjct: 12 VANANSTGNA---GTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDK--- 65
Query: 127 FVRAFMWDSGTN---VGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEG-PPFRFK 182
+W S TN + ++GHS + A+ + + +D + ++ P+
Sbjct: 66 --TMILW-SATNYSLIHRYEGHSSGISDLAWSSDSHY-TCSASDDCTLRIWDARSPYECL 121
Query: 183 QSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSW 242
+ R H+NFV CV ++P + +S D+ I++ K+G+ + + + H+ I +V +
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKA---HSMPISSVHF 178
Query: 243 SPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSL 302
+ DG +++ S D S K+WD E G KTL S V ++I+ +L
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKE---GTCLKTLIDDKSPAVS--FAKFSPNGKFILVATL 233
Query: 303 GGTISI--FLSSDLDKAPTSFSGHMKNVSSLTILKS--NPRILLSSSYDGLIVKW-IQGI 357
T+ + + + K ++GH V +T S N + ++S S D + W +Q
Sbjct: 234 DSTLKLSNYATGKFLKV---YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR 290
Query: 358 GYSGKL--HRKENCQIKCLAAVEDEIITSG 385
+L H + C V++EI +SG
Sbjct: 291 NILQRLEGHTDAVISVSC-HPVQNEISSSG 319
>AT2G32700.7 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=806
Length = 806
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 490 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 544
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 545 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 597
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 598 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 653
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 654 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 711
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 712 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 762
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 763 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 805
>AT2G32700.2 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 471 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 525
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 526 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 578
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 634
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 692
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 693 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 744 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 786
>AT2G32700.1 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 471 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 525
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 526 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 578
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 634
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 692
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 693 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 744 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 786
>AT2G32700.4 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 471 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 525
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 526 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 578
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 634
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 692
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 693 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 744 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 786
>AT2G32700.5 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 471 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 525
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 526 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 578
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 634
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 692
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 693 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 744 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 786
>AT2G32700.3 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 471 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 525
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 526 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 578
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 634
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 692
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 693 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 744 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 786
>AT2G32700.6 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=785
Length = 785
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 14 STERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
S + G G + G K NS ++T N +VS + A FS +G+ +
Sbjct: 469 SQDDGDGGSLFGTLKRNSSVHTETSKPFSFN-----EVSCIRKSASKVICCSFSYDGKLL 523
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF-M 132
ASA V IW ++ + I D+++ P+ ++ SF + +
Sbjct: 524 ASAGHDKKVFIWNMET-LQVESTPEEHAHIITDVRFRPNSTQLATS------SFDKTIKI 576
Query: 133 WDS---GTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHS 189
WD+ G + GH+ V+S + P + + +C + + F++ R
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD----INASCVRAVK 632
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
VR+ P +FL+ S+ IFD ++ K ++ GH+ ++++V WSP+G+ V
Sbjct: 633 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNK--RVNIFKGHSSNVHSVCWSPNGELV 690
Query: 250 LTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGTISIF 309
+VS D + K+W +S +G L+ G + ++ Y + +GG +I
Sbjct: 691 ASVSED-AVKLWSLS---SGDCIHELSNSG-----NKFHSVVFHPSYPDLLVIGGYQAIE 741
Query: 310 LSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
L + ++ + +GH +S+L S ++ S+S+D + W
Sbjct: 742 LWNTMENKCMTVAGHECVISALAQSPST-GVVASASHDKSVKIW 784
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 35 TNGRSVVIINLQNPLQVSVYGEHAYPATVAR---FSPNGEWVASADSSGTVRIWGTRNDF 91
+N I+ PL++ + + A + + P W+ ++ SGT+ IW +
Sbjct: 33 SNDHGCCILRRSEPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQ- 91
Query: 92 VLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLS 151
V+ K F V + ++ +VA D ++R + +++ V F+ HS +
Sbjct: 92 VMAKSFEVTELPVRSAKFVARKQWVVAGAD---DMYIRVYNYNTMDKVKVFEAHSDYIRC 148
Query: 152 CAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQSHRDHSNFVNCVRYSP-DGSKFLSVGS 209
A PT P+ +++ +D L+ ++ + Q HS++V V ++P D + F S
Sbjct: 149 VAVHPTLPY-VLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASL 207
Query: 210 DKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQ--VLTVSADKSAKVWD 262
D+ I++ S + L + H + V + G + ++T S D +AKVWD
Sbjct: 208 DRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 259
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
++ I N Q + + P A+F +WV + +R++ N K F
Sbjct: 82 TLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNY-NTMDKVKVFE 140
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W+ G + F+GHS V+ + P
Sbjct: 141 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPK 197
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 198 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 253
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 254 TAKVWDYQTKSCVQTLE---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 300
>AT3G15980.1 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=909
Length = 909
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
P W+ ++ SGTV IW + + K F V + ++ P +VA D
Sbjct: 23 LHPTEPWILASLYSGTVCIWNYQTQ-TITKSFEVTELPVRSAKFIPRKQWVVAGAD---D 78
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQS 184
++R + +++ V F+ HS + A PT P+ +++ +D L+ ++ + Q
Sbjct: 79 MYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPY-VLSSSDDMLIKLWDWENGWACTQI 137
Query: 185 HRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
HS++V V ++P D + F S D+ I++ S + L + H + V +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYF 194
Query: 244 PDGKQ--VLTVSADKSAKVWD 262
G + ++T S D +AKVWD
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
+V I N Q + P A+F P +WV + +R++ N K F
Sbjct: 38 TVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W++G + F+GHS V+ + P
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLD---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 28/221 (12%)
Query: 66 FSPNGEWVASADSSGTVRIW--GTRNDFVLKK-EFRVLSGRIDDLQWSPDGLRIVACGDA 122
F P+G+++ + T R+W T + +L++ R + G + + DG +CG
Sbjct: 347 FHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYG----IAFQQDGALAASCG-- 400
Query: 123 KGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFK 182
S R + +G ++ F GH + V S + P + + + GED ++ R +
Sbjct: 401 -LDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN-GYHLASGGEDNQCRIWD---LRMR 455
Query: 183 QSHR---DHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGK----SGEKIGELSSEGGHTG 235
+S H+N V+ V+Y P FL+ S +D K SG + S GH
Sbjct: 456 KSLYIIPAHANLVSQVKYEPQEGYFLATAS------YDMKVNIWSGRDFSLVKSLAGHES 509
Query: 236 SIYAVSWSPDGKQVLTVSADKSAKVWDIS-EDNNGKVKKTL 275
+ ++ + D + TVS D++ K+W S D+ + K+T+
Sbjct: 510 KVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETM 550
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 32/313 (10%)
Query: 49 LQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIW---GTRNDFVLKKEFRVLSGRID 105
L S +G+ P T FS +G+ +A+ SG ++W N + K+ + R
Sbjct: 247 LDCSNFGDD-RPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHK---ERAT 302
Query: 106 DLQWSP-DGLRIVACGDAKGKSFVRAFMWDS-GTNVGEFDGHSRRVLSCAYKPTRPFRIV 163
D+ +SP D A D K +W + GT + F+GH R+ A+ P+ +
Sbjct: 303 DVVFSPVDDCLATASADRTAK------LWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGT 356
Query: 164 TCGEDF--LVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSG 221
T + L + G ++ H S V + + DG+ S G D ++D ++G
Sbjct: 357 TSYDKTWRLWDINTGAELLLQEGH---SRSVYGIAFQQDGALAASCGLDSLARVWDLRTG 413
Query: 222 EKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTL-TCPGS 280
I GH +++V++SP+G + + D ++WD+ +++K+L P
Sbjct: 414 RSILVFQ---GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL------RMRKSLYIIPAH 464
Query: 281 GGVEDMLVGCLWLNEYIVAVSLGGTISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRI 340
+ + ++ S ++I+ D S +GH V+SL I ++
Sbjct: 465 ANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLV-KSLAGHESKVASLDI-TADSSC 522
Query: 341 LLSSSYDGLIVKW 353
+ + S+D I W
Sbjct: 523 IATVSHDRTIKLW 535
>AT3G15980.4 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=914
Length = 914
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
P W+ ++ SGTV IW + + K F V + ++ P +VA D
Sbjct: 23 LHPTEPWILASLYSGTVCIWNYQTQ-TITKSFEVTELPVRSAKFIPRKQWVVAGAD---D 78
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQS 184
++R + +++ V F+ HS + A PT P+ +++ +D L+ ++ + Q
Sbjct: 79 MYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPY-VLSSSDDMLIKLWDWENGWACTQI 137
Query: 185 HRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
HS++V V ++P D + F S D+ I++ S + L + H + V +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYF 194
Query: 244 PDGKQ--VLTVSADKSAKVWD 262
G + ++T S D +AKVWD
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
+V I N Q + P A+F P +WV + +R++ N K F
Sbjct: 38 TVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W++G + F+GHS V+ + P
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLD---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>AT3G15980.3 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
P W+ ++ SGTV IW + + K F V + ++ P +VA D
Sbjct: 23 LHPTEPWILASLYSGTVCIWNYQTQ-TITKSFEVTELPVRSAKFIPRKQWVVAGAD---D 78
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQS 184
++R + +++ V F+ HS + A PT P+ +++ +D L+ ++ + Q
Sbjct: 79 MYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPY-VLSSSDDMLIKLWDWENGWACTQI 137
Query: 185 HRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
HS++V V ++P D + F S D+ I++ S + L + H + V +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYF 194
Query: 244 PDGKQ--VLTVSADKSAKVWD 262
G + ++T S D +AKVWD
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
+V I N Q + P A+F P +WV + +R++ N K F
Sbjct: 38 TVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W++G + F+GHS V+ + P
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLD---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>AT3G15980.2 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
P W+ ++ SGTV IW + + K F V + ++ P +VA D
Sbjct: 23 LHPTEPWILASLYSGTVCIWNYQTQ-TITKSFEVTELPVRSAKFIPRKQWVVAGAD---D 78
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQS 184
++R + +++ V F+ HS + A PT P+ +++ +D L+ ++ + Q
Sbjct: 79 MYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPY-VLSSSDDMLIKLWDWENGWACTQI 137
Query: 185 HRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
HS++V V ++P D + F S D+ I++ S + L + H + V +
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYF 194
Query: 244 PDGKQ--VLTVSADKSAKVWD 262
G + ++T S D +AKVWD
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
+V I N Q + P A+F P +WV + +R++ N K F
Sbjct: 38 TVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W++G + F+GHS V+ + P
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLD---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>AT3G15980.5 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=930
Length = 930
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 48 PLQVSV---YGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRI 104
PL++ + + + + P W+ ++ SGTV IW + + K F V +
Sbjct: 2 PLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQ-TITKSFEVTELPV 60
Query: 105 DDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVT 164
++ P +VA D ++R + +++ V F+ HS + A PT P+ +++
Sbjct: 61 RSAKFIPRKQWVVAGAD---DMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPY-VLS 116
Query: 165 CGEDFLVNFYEGPP-FRFKQSHRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFDGKSGE 222
+D L+ ++ + Q HS++V V ++P D + F S D+ I++ S +
Sbjct: 117 SSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPD 176
Query: 223 KIGELSSEGGHTGSIYAVSWSPDGKQ--VLTVSADKSAKVWD 262
L + H + V + G + ++T S D +AKVWD
Sbjct: 177 PNFTLDA---HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
+V I N Q + P A+F P +WV + +R++ N K F
Sbjct: 38 TVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYN-YNTMDKVKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W++G + F+GHS V+ + P
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLD---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 30/255 (11%)
Query: 16 ERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVAS 75
+ G G L + + S+ + NGR + L H+ P A FSP G++V S
Sbjct: 386 QAGSGALQAENDSSDQSIGPNGRRSYTLLLG----------HSGPVYSATFSPPGDFVLS 435
Query: 76 ADSSGTVRIWGTRNDFVLKKEFRVLSGR---IDDLQWSPDGLRIVACGDAKGKSFVRAFM 132
+ + T+R+W T+ L G + D Q+SP G +C + R +
Sbjct: 436 SSADTTIRLWSTK----LNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRT---ARIWS 488
Query: 133 WDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE---GPPFRFKQSHRDHS 189
D + GH V + P + I T D V ++ G R HR
Sbjct: 489 MDRIQPLRIMAGHLSDVDCVQWHPNCNY-IATGSSDKTVRLWDVQTGECVRIFIGHR--- 544
Query: 190 NFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQV 249
+ V + SPDG S D +++D + I L GH ++++S+S +G +
Sbjct: 545 SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM---GHNSCVWSLSYSGEGSLL 601
Query: 250 LTVSADKSAKVWDIS 264
+ SAD + K+WD++
Sbjct: 602 ASGSADCTVKLWDVT 616
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
Query: 444 TINLGFT--VSATAVSPDGSEAIIGGQDGKLHIYSISGDTFEEEAVLEKHRGAISVIRYS 501
T+ LG + V + SP G + D + ++S + + H + ++S
Sbjct: 412 TLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA--NLVCYKGHNYPVWDAQFS 469
Query: 502 PDFSMFASGDVNREAVVWDRASRDVKLKNMLYHSARINCLAWSPDSRRIATGSLDTCVII 561
P FAS +R A +W R L+ M H + ++C+ W P+ IATGS D V +
Sbjct: 470 PFGHYFASCSHDRTARIWS-MDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 562 YEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSSG-EDAFIRVWKIT 608
+++ R+ I H V L S + ++SG ED I +W ++
Sbjct: 529 WDVQTGECVRIFI--GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 574
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 17/226 (7%)
Query: 57 HAYPATVARFSPNGEWVASADSSGTVRIW--GTRNDFVLK--KEFRVLSGRIDDLQWSPD 112
H + +FS +G +ASA + T+R + T ND + + +EF I D+ +S D
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 113 GLRIVACGDAKGKSFVRAFMWD--SGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFL 170
IV+ D K +WD +G+ + GH+ + P + IV+ D
Sbjct: 83 ARFIVSASDDKTLK-----LWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDET 136
Query: 171 VNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSE 230
V ++ + + HS+ V V ++ DGS +S D I+D +G + L +
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 231 GGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLT 276
+ V +SP+GK +L + D + ++W+IS + K KT T
Sbjct: 197 --ENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS---SAKFLKTYT 237
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 52/349 (14%)
Query: 178 PFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKS-GEKIGELSSE-GGHTG 235
P+ Q+ H+ V+ V++S DG S +DK + + + I E E GH
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHEN 72
Query: 236 SIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLN- 294
I V++S D + +++ S DK+ K+WD+ G + KTL + C+ N
Sbjct: 73 GISDVAFSSDARFIVSASDDKTLKLWDVE---TGSLIKTLIGHTNYAF------CVNFNP 123
Query: 295 --EYIVAVSLGGTISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVK 352
IV+ S T+ I+ K H V+++ + +++SSSYDGL
Sbjct: 124 QSNMIVSGSFDETVRIW-DVTTGKCLKVLPAHSDPVTAVD-FNRDGSLIVSSSYDGLCRI 181
Query: 353 WIQGIGYSGKLHRKENCQIKCLAAVEDEIITSGFDNKIWRVSLHGDQCGDAEAIDIGNQP 412
W G G+ K ++DE F R S +G
Sbjct: 182 WDSGTGHCVK------------TLIDDENPPVSF----VRFSPNG--------------- 210
Query: 413 KDFSVALLSPELALVSIDSGVVVLRGTKIVSTINLGFTVSATAVSPDGSEAIIGGQDGKL 472
K V L L L +I S + T +N + +S+ +G + G +D +
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYT---GHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 473 HIYSISGDTFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDR 521
H++ ++ ++ LE H + + P ++ ASG +++ +W +
Sbjct: 268 HMWELNSKKLLQK--LEGHTETVMNVACHPTENLIASGSLDKTVRIWTQ 314
>AT5G43920.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:17673397-17675630 FORWARD
LENGTH=523
Length = 523
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 48/324 (14%)
Query: 51 VSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRND--FVLKKEFRVLSGRIDDLQ 108
V + H +FS +G+++A+A S T IW +D LK + +
Sbjct: 217 VQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVS 276
Query: 109 WSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEF----DGHSRRVLSCAYKPTRPFRIVT 164
WSPD +++ CG+A+ +WD T V + V SCA+ P R+V
Sbjct: 277 WSPDDTKLLTCGNAEVLK-----LWDVDTGVLRHTFGNNNTGFTVSSCAWFPDST-RLV- 329
Query: 165 CGE---DFLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSG 221
CG + + ++ K V + +PDG ++V SDK I + ++
Sbjct: 330 CGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLET- 388
Query: 222 EKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSG 281
K+ + SE I ++S S DGK + + + +WD++ G+ K+ L G
Sbjct: 389 -KVERVISE---EQPITSLSISGDGKFFIVNLSCQEIHLWDLA----GEWKQPLKFSGHR 440
Query: 282 GVEDMLVGCLWLNEYIVAVSLGGTISIFLSSDLD------------KAPTSFSGHMKNVS 329
++Y++ GG S F++S + K SGH V+
Sbjct: 441 Q-----------SKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVN 489
Query: 330 SLTILKSNPRILLSSSYDGLIVKW 353
++ NPR+L S+S D I W
Sbjct: 490 CVSWNPKNPRMLASASDDQTIRIW 513
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 15 TERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVA 74
T GR LI+G +S NG+S N + LQ H P +S N ++
Sbjct: 138 TPSGRR-LITGS-QSGEFTLWNGQS---FNFEMILQA-----HDQPIRSMVWSHNENYMV 187
Query: 75 SADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWD 134
S D GT++ W + V K I DL + L+ +C D + V+ + +
Sbjct: 188 SGDDGGTLKYWQNNMNNV-KANKTAHKESIRDLSFCKTDLKFCSCSD---DTTVKVWDFT 243
Query: 135 SGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHSNFVNC 194
+ GH V S + PT+ +V+ G+D LV ++ R S H N V
Sbjct: 244 KCVDESSLTGHGWDVKSVDWHPTKSL-LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLS 302
Query: 195 VRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQ-VLTVS 253
V+++ +G+ L+ D+ ++D ++ + EL S GHT + +++W P ++ ++ S
Sbjct: 303 VKWNQNGNWLLTASKDQIIKLYDIRT---MKELQSFRGHTKDVTSLAWHPCHEEYFVSGS 359
Query: 254 ADKSAKVWDISEDN 267
+D S W + +N
Sbjct: 360 SDGSICHWIVGHEN 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 120/331 (36%), Gaps = 75/331 (22%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
++P+G + + SG +W ++ F + + I + WS + +V+ D
Sbjct: 137 WTPSGRRLITGSQSGEFTLWNGQS-FNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTL 195
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSH 185
+ + M + N R + C + +C +D V ++ + S
Sbjct: 196 KYWQNNMNNVKANKTAHKESIRDLSFCKTD----LKFCSCSDDTTVKVWDFTKCVDESSL 251
Query: 186 RDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPD 245
H V V + P S +S G D+ ++D +SG EL S GH + +V W+ +
Sbjct: 252 TGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGR---ELCSLHGHKNIVLSVKWNQN 308
Query: 246 GKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGT 305
G +LT S D+ K++DI + K L
Sbjct: 309 GNWLLTASKDQIIKLYDI------RTMKELQ----------------------------- 333
Query: 306 ISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKWIQGIGYSGKLHR 365
SF GH K+V+SL + +S S DG I WI G
Sbjct: 334 --------------SFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVG--------- 370
Query: 366 KENCQIKCLAAVEDEIITSGFDNKIWRVSLH 396
EN QI+ I + DN +W ++ H
Sbjct: 371 HENPQIE---------IPNAHDNSVWDLAWH 392
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 116 IVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE 175
+VA G A G ++ + + V GH +S + P F + D + ++
Sbjct: 73 LVAAGAASGT--IKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEF-FASGSLDTNLKIWD 129
Query: 176 GPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTG 235
+++ H+ VN +R++PDG +S G D ++D +G+ + E S H G
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS---HEG 186
Query: 236 SIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLN 294
I ++ + P + T SADK+ K WD+ +T GSGG E V CL N
Sbjct: 187 KIQSLDFHPHEFLLATGSADKTVKFWDL---------ETFELIGSGGTETTGVRCLTFN 236
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
++ + +L+ V H F P GE+ AS ++IW R + ++
Sbjct: 82 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHT-YK 140
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTR 158
+ ++ L+++PDG IV+ G+ + V+ + +G + EF H ++ S + P
Sbjct: 141 GHTRGVNVLRFTPDGRWIVSGGE---DNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP-H 196
Query: 159 PFRIVTCGEDFLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFL 205
F + T D V F++ F S + V C+ ++PDG L
Sbjct: 197 EFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 243
>AT2G20330.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:8772888-8775518 REVERSE LENGTH=648
Length = 648
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 30/240 (12%)
Query: 137 TNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFY--EGPPFR---FKQSHRDHSNF 191
+N + GH++ V S A + R+++ D+ V Y +G R F+Q +
Sbjct: 168 SNEIQLKGHTKIVSSLAVD-SAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQ 226
Query: 192 VNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGE----------LSSEGGHTGSIYAVS 241
V V +SP +FL V + IFD + G +GE L + GH +
Sbjct: 227 VRSVSWSPTSGQFLCVTGSAQAKIFD-RDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGE 285
Query: 242 WSPDGKQ-VLTVSADKSAKVWDISE--DNNGKVKKTLTCPGSGGVEDMLVGCLWLNE-YI 297
W P K+ VLT S D S ++WD++ +K L PG V C W +
Sbjct: 286 WHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPV----TTCAWDRDGKR 341
Query: 298 VAVSLG-GTISIF-LSSDLDKAPTSFSG--HMKNVSSLTILKSNPRILLSSSYDGLIVKW 353
+A +G G+I I+ L P + G H +++S+ S+ RILLS S+DG + W
Sbjct: 342 IAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVK-FSSDGRILLSRSFDGSLKVW 400
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
P W+ ++ SGT+ IW + V+ K F V + ++ +VA D
Sbjct: 23 LHPTEPWILASLYSGTLCIWNYQTQ-VMAKSFEVTELPVRSAKFVARKQWVVAGAD---D 78
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQS 184
++R + +++ V F+ HS + A PT P+ +++ +D L+ ++ + Q
Sbjct: 79 MYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPY-VLSSSDDMLIKLWDWEKGWACTQI 137
Query: 185 HRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWS 243
HS++V V ++P D + F S D+ I++ S + L + H + V +
Sbjct: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYF 194
Query: 244 PDGKQ--VLTVSADKSAKVWD 262
G + ++T S D +AKVWD
Sbjct: 195 TGGDKPYLITGSDDHTAKVWD 215
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
++ I N Q + + P A+F +WV + +R++ N K F
Sbjct: 38 TLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYN-YNTMDKVKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
S I + P +++ D ++ + W+ G + F+GHS V+ + P
Sbjct: 97 AHSDYIRCVAVHPTLPYVLSSSD---DMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HQKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AV + P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLE---GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>AT4G32551.2 | Symbols: LUG | LisH dimerisation motif;WD40/YVTN
repeat-like-containing domain | chr4:15707863-15713359
FORWARD LENGTH=969
Length = 969
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 17/230 (7%)
Query: 56 EHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLR 115
EH T RFSP+ +A++ TVR+W N + F S + L + P
Sbjct: 729 EHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDD 788
Query: 116 IVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE 175
++ D + +R + ++G+ + G S ++ ++P R + + LVN +
Sbjct: 789 LICSCDNDNE--IRYWSINNGSCTRVYKGGSTQI---RFQP-RVGKYLAASSANLVNVLD 842
Query: 176 GPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSD--KRGIIFDGKSGEKIGELSSEGGH 233
+ S + H+N +N V + P G SV D K + G GE + ELS G
Sbjct: 843 VETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGECVHELSCNG-- 900
Query: 234 TGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGV 283
+ + P +L + +S ++W++SE+ KT+T P G+
Sbjct: 901 -NKFQSCVFHPAYPSLLVIGCYQSLELWNMSEN------KTMTLPAHEGL 943
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 15 TERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVA 74
T GR LI+G +S NG+S N + LQ H P +S N ++
Sbjct: 132 TPSGR-RLITGS-QSGEFTLWNGQS---FNFEMILQA-----HDQPIRSMVWSHNENYMV 181
Query: 75 SADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWD 134
S D GT++ W + V K I DL + L+ +C D + V+ + +
Sbjct: 182 SGDDGGTLKYWQNNMNNV-KANKTAHKESIRDLSFCKTDLKFCSCSD---DTTVKVWDFT 237
Query: 135 SGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSHRDHSNFVNC 194
+ GH V S + PT+ +V+ G+D LV ++ R S H N V
Sbjct: 238 KCVDESSLTGHGWDVKSVDWHPTKSL-LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLS 296
Query: 195 VRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQ-VLTVS 253
V+++ +G+ L+ D+ ++D ++ + EL S GHT + +++W P ++ ++ S
Sbjct: 297 VKWNQNGNWLLTASKDQIIKLYDIRT---MKELQSFRGHTKDVTSLAWHPCHEEYFVSGS 353
Query: 254 ADKSAKVWDISEDN 267
+D S W + +N
Sbjct: 354 SDGSICHWIVGHEN 367
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 120/331 (36%), Gaps = 75/331 (22%)
Query: 66 FSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGK 125
++P+G + + SG +W ++ F + + I + WS + +V+ D
Sbjct: 131 WTPSGRRLITGSQSGEFTLWNGQS-FNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTL 189
Query: 126 SFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPPFRFKQSH 185
+ + M + N R + C + +C +D V ++ + S
Sbjct: 190 KYWQNNMNNVKANKTAHKESIRDLSFCKTD----LKFCSCSDDTTVKVWDFTKCVDESSL 245
Query: 186 RDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPD 245
H V V + P S +S G D+ ++D +SG EL S GH + +V W+ +
Sbjct: 246 TGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGR---ELCSLHGHKNIVLSVKWNQN 302
Query: 246 GKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNEYIVAVSLGGT 305
G +LT S D+ K++DI + K L
Sbjct: 303 GNWLLTASKDQIIKLYDI------RTMKELQ----------------------------- 327
Query: 306 ISIFLSSDLDKAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVKWIQGIGYSGKLHR 365
SF GH K+V+SL + +S S DG I WI G
Sbjct: 328 --------------SFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVG--------- 364
Query: 366 KENCQIKCLAAVEDEIITSGFDNKIWRVSLH 396
EN QI+ I + DN +W ++ H
Sbjct: 365 HENPQIE---------IPNAHDNSVWDLAWH 386
>AT4G32551.1 | Symbols: LUG, RON2 | LisH dimerisation
motif;WD40/YVTN repeat-like-containing domain |
chr4:15707863-15713359 FORWARD LENGTH=931
Length = 931
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 17/230 (7%)
Query: 56 EHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLR 115
EH T RFSP+ +A++ TVR+W N + F S + L + P
Sbjct: 691 EHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDD 750
Query: 116 IVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE 175
++ D + +R + ++G+ + G S ++ ++P R + + LVN +
Sbjct: 751 LICSCDNDNE--IRYWSINNGSCTRVYKGGSTQI---RFQP-RVGKYLAASSANLVNVLD 804
Query: 176 GPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSD--KRGIIFDGKSGEKIGELSSEGGH 233
+ S + H+N +N V + P G SV D K + G GE + ELS G
Sbjct: 805 VETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGECVHELSCNG-- 862
Query: 234 TGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGV 283
+ + P +L + +S ++W++SE+ KT+T P G+
Sbjct: 863 -NKFQSCVFHPAYPSLLVIGCYQSLELWNMSEN------KTMTLPAHEGL 905
>AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40
repeat family protein | chr1:27725059-27729722 FORWARD
LENGTH=511
Length = 511
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 65/220 (29%)
Query: 54 YGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDD------- 106
+G+ ++ A ARFSP+G+++AS+ G + +W D++ K + L + D+
Sbjct: 210 FGKKSH-AECARFSPDGQFLASSSVDGFIEVW----DYISGKLKKDLQYQADESFMMHDD 264
Query: 107 ----LQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRI 162
+ +S D ++A G GK ++ + +G + FD HS+ V S +
Sbjct: 265 PVLCIDFSRDS-EMLASGSQDGK--IKIWRIRTGVCIRRFDAHSQGVTSLS--------- 312
Query: 163 VTCGEDFLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGE 222
+S DGS+ LS D+ I KSG+
Sbjct: 313 ----------------------------------FSRDGSQLLSTSFDQTARIHGLKSGK 338
Query: 223 KIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWD 262
+ E GHT + ++ DG +++T S+D + KVWD
Sbjct: 339 LLKEFR---GHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
>AT1G10580.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3491560-3493665 REVERSE LENGTH=573
Length = 573
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 16 ERGRGILISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVAS 75
+ R + S D KS ++ G VVI + P H + PNG W+A+
Sbjct: 422 DNNRRFVTSSDDKS-LRVWEFGIPVVIKYISEP--------HMHSMPSISVHPNGNWLAA 472
Query: 76 ADSSGTVRIWGTRNDFVLKKEFR----VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAF 131
+ I+ TR F L K+ R +++G + +SPDG R V GD +GK + +
Sbjct: 473 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG-RFVMSGDGEGKCWF--W 529
Query: 132 MWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE 175
W S H+ + + P ++ TCG D L+ +++
Sbjct: 530 DWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>AT1G79990.1 | Symbols: | structural molecules |
chr1:30084522-30091949 FORWARD LENGTH=1135
Length = 1135
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 26/236 (11%)
Query: 40 VVIINLQ-NPLQVSV---YGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLK- 94
V +I L+ +PL++ + + + + P W+ ++ SGT+ IW + ++K
Sbjct: 208 VFLIALKFDPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKS 267
Query: 95 ---KEFRVLSGR-IDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVL 150
E V S + I QW +VA D F+R + +++ + F+ H+ +
Sbjct: 268 FDVTELPVRSAKFIARKQW------VVAGAD---DMFIRVYNYNTMDKIKVFEAHADYIR 318
Query: 151 SCAYKPTRPFRIVTCGEDFLVNFYEGPP-FRFKQSHRDHSNFVNCVRYSP-DGSKFLSVG 208
A PT P+ +++ +D L+ ++ + Q HS++V V ++P D + F S
Sbjct: 319 CVAVHPTLPY-VLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASAS 377
Query: 209 SDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQ--VLTVSADKSAKVWD 262
D+ I++ S + L + H + V + G + ++T S D +AKVWD
Sbjct: 378 LDRTIKIWNLGSPDPNFTLDA---HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 430
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 15 TERGRGI-LISGDPKSNSMLYTNGRSVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWV 73
+ER + + L +P + LY+ ++ I N Q V + P A+F +WV
Sbjct: 230 SERVKSVDLHPTEPWILASLYSG--TLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWV 287
Query: 74 ASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMW 133
+ +R++ N K F + I + P +++ D ++ + W
Sbjct: 288 VAGADDMFIRVYN-YNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD---DMLIKLWDW 343
Query: 134 DSGTNVGE-FDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDH 188
+ G + F+GHS V+ + P + D + + P F H
Sbjct: 344 EKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA----H 399
Query: 189 SNFVNCVRYSPDGSK-FLSVGSDKR-GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDG 246
VNCV Y G K +L GSD ++D ++ + L GHT ++ AVS+ P+
Sbjct: 400 LKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE---GHTHNVSAVSFHPEL 456
Query: 247 KQVLTVSADKSAKVW 261
++T S D + ++W
Sbjct: 457 PIIITGSEDGTVRIW 471
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 116 IVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE 175
+VA G A G ++ + + V GH +S + P F + D + ++
Sbjct: 73 LVAAGAASGT--IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKIWD 129
Query: 176 GPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTG 235
+++ H+ VN +R++PDG +S G D ++D +G+ + E S H G
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS---HEG 186
Query: 236 SIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNE 295
I ++ + P + T SAD++ K WD+ +T GSGG E V CL N
Sbjct: 187 QIQSLDFHPHEFLLATGSADRTVKFWDL---------ETFELIGSGGPETAGVRCLSFNP 237
Query: 296 --YIVAVSLGGTISIF 309
V L ++ IF
Sbjct: 238 DGKTVLCGLQESLKIF 253
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 116 IVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYE 175
+VA G A G ++ + + V GH +S + P F + D + ++
Sbjct: 73 LVAAGAASGT--IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKIWD 129
Query: 176 GPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTG 235
+++ H+ VN +R++PDG +S G D ++D +G+ + E S H G
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS---HEG 186
Query: 236 SIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDMLVGCLWLNE 295
I ++ + P + T SAD++ K WD+ +T GSGG E V CL N
Sbjct: 187 QIQSLDFHPHEFLLATGSADRTVKFWDL---------ETFELIGSGGPETAGVRCLSFNP 237
Query: 296 --YIVAVSLGGTISIF 309
V L ++ IF
Sbjct: 238 DGKTVLCGLQESLKIF 253
>AT1G79990.5 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=912
Length = 912
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 48 PLQVSV---YGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKK----EFRVL 100
PL++ + + + + P W+ ++ SGT+ IW + ++K E V
Sbjct: 2 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVR 61
Query: 101 SGR-IDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRP 159
S + I QW +VA D F+R + +++ + F+ H+ + A PT P
Sbjct: 62 SAKFIARKQW------VVAGAD---DMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLP 112
Query: 160 FRIVTCGEDFLVNFYEGPP-FRFKQSHRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFD 217
+ +++ +D L+ ++ + Q HS++V V ++P D + F S D+ I++
Sbjct: 113 Y-VLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Query: 218 GKSGEKIGELSSEGGHTGSIYAVSWSPDGKQ--VLTVSADKSAKVWD 262
S + L + H + V + G + ++T S D +AKVWD
Sbjct: 172 LGSPDPNFTLDA---HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
++ I N Q V + P A+F +WV + +R++ N K F
Sbjct: 38 TLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNY-NTMDKIKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
+ I + P +++ D ++ + W+ G + F+GHS V+ + P
Sbjct: 97 AHADYIRCVAVHPTLPYVLSSSD---DMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HLKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AVS+ P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLE---GHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 48 PLQVSV---YGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKK----EFRVL 100
PL++ + + + + P W+ ++ SGT+ IW + ++K E V
Sbjct: 2 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVR 61
Query: 101 SGR-IDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRP 159
S + I QW +VA D F+R + +++ + F+ H+ + A PT P
Sbjct: 62 SAKFIARKQW------VVAGAD---DMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLP 112
Query: 160 FRIVTCGEDFLVNFYEGPP-FRFKQSHRDHSNFVNCVRYSP-DGSKFLSVGSDKRGIIFD 217
+ +++ +D L+ ++ + Q HS++V V ++P D + F S D+ I++
Sbjct: 113 Y-VLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Query: 218 GKSGEKIGELSSEGGHTGSIYAVSWSPDGKQ--VLTVSADKSAKVWD 262
S + L + H + V + G + ++T S D +AKVWD
Sbjct: 172 LGSPDPNFTLDA---HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 18/230 (7%)
Query: 39 SVVIINLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFR 98
++ I N Q V + P A+F +WV + +R++ N K F
Sbjct: 38 TLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNY-NTMDKIKVFE 96
Query: 99 VLSGRIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGE-FDGHSRRVLSCAYKPT 157
+ I + P +++ D ++ + W+ G + F+GHS V+ + P
Sbjct: 97 AHADYIRCVAVHPTLPYVLSSSD---DMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPK 153
Query: 158 RPFRIVTCGEDFLVNFYE----GPPFRFKQSHRDHSNFVNCVRYSPDGSK-FLSVGSDKR 212
+ D + + P F H VNCV Y G K +L GSD
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDA----HLKGVNCVDYFTGGDKPYLITGSDDH 209
Query: 213 -GIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVW 261
++D ++ + L GHT ++ AVS+ P+ ++T S D + ++W
Sbjct: 210 TAKVWDYQTKSCVQTLE---GHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 44 NLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGR 103
+L+ V + H + F P GE++AS S +R+W TR ++ ++ +
Sbjct: 86 DLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQT-YKGHTRG 144
Query: 104 IDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIV 163
I +++SPDG +V+ G + V+ + +G + EF H + S + P F +
Sbjct: 145 ISTIEFSPDGRWVVSGG---LDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE-FLLA 200
Query: 164 TCGEDFLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFL 205
T D V F++ F + R + V + + PDG
Sbjct: 201 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242
>AT4G32990.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:15920230-15922658 FORWARD LENGTH=328
Length = 328
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 60/314 (19%)
Query: 95 KEFRVLSGRID---DLQWSP--DGLRIVACGDAK------GKSFVRAFMWDSGTNVGEFD 143
+E + L G D ++ W+P DG+ I +C K S R++ G +G FD
Sbjct: 11 EEVQKLEGHTDRVWNVAWNPAADGV-IASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFD 69
Query: 144 G--------------------HSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEGPP----- 178
G H V S ++ + + TCG D V +E P
Sbjct: 70 GNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSL-LATCGRDKSVWIWEIQPEEDDE 128
Query: 179 FRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIF-------DGKSGEKIGELSSEG 231
F HS V V + P S D I+ D + + EL++
Sbjct: 129 FDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNN-- 186
Query: 232 GHTGSIYAVSWSPDGKQVLTVSADKSAKVW--DIS--EDNNGKVKKTLTCPGSGGVEDML 287
GH+ +++++S++ G +++T S D + K+W DIS + G V T C SG + +
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTI 246
Query: 288 VGCLWLNEYIVAVSLG-GTISIFLSSDLDKAP--------TSFSGHMKNVSSLTILKSNP 338
W + ++A G TI +F+ SD D H +V+S+
Sbjct: 247 YSVHWSRDGVIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPDKE 306
Query: 339 RILLSSSYDGLIVK 352
LL+S+ D +VK
Sbjct: 307 SRLLASASDDKMVK 320
>AT3G42660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:14751280-14755701 FORWARD
LENGTH=953
Length = 953
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 107 LQWSPDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPF--RIVT 164
L ++ G + A GD +G + F G+ V GH V + P I T
Sbjct: 110 LAFNGSGSLLAAAGDDEGIKLINTF---DGSIVRVLKGHKGPVTGLDFHPNGELLASIDT 166
Query: 165 CGEDFLVNFYEGP-PFRFKQSHRD---HSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKS 220
G G F K D +++ VN R+SPDG G +++D +
Sbjct: 167 TGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFT 226
Query: 221 GEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNN 268
GEK+ L G H +I ++W+P+GK + T DK +WD+ + +
Sbjct: 227 GEKLFAL--RGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQD 272
>AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kinase
1B | chr1:17981977-17983268 REVERSE LENGTH=326
Length = 326
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 57 HAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDL---QWSPDG 113
H++ S +G++ S G +R+W D + R G D+ +S D
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLW----DLATGESTRRFVGHTKDVLSVAFSTDN 117
Query: 114 LRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKP-TRPFRIVTCGEDFLVN 172
+IV+ + + + E DGH V + P T IV+ D V
Sbjct: 118 RQIVSASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 173 FYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGG 232
+ + + + HS ++N V SPDGS S G D +++D G+K+ L E G
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAG 234
Query: 233 HTGSIYAVSWSPDGKQVLTVSADKSAKVWDI 263
I+++ +SP+ + L + + S ++WD+
Sbjct: 235 SI--IHSLCFSPN-RYWLCAATENSIRIWDL 262
>AT2G26060.2 | Symbols: emb1345 | Transducin/WD40 repeat-like
superfamily protein | chr2:11102400-11105081 FORWARD
LENGTH=337
Length = 337
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
Query: 139 VGEFDGHSRRVLSCAYKPTRPFR------IVTCGEDFLVNFYEGPPFRFKQS-----HRD 187
+ + +GH+ RV S A+ P + +C D V +E +
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 188 HSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSG------EKIGELSSEGGHTGSIYAVS 241
H+ V +SP G + L+ S FDG +G + +S+ GH + +VS
Sbjct: 73 HTRTVRSCAWSPSG-QLLATAS------FDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 242 WSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDM-LVGCLWLNEYIVAV 300
W+ G + T S DKS +W++ E N LT G +D+ +V + + +
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLT----GHTQDVKMVQWHPTMDVLFSC 181
Query: 301 SLGGTISIFLSSDLD-------KAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVK 352
S TI ++ S D D S +GH V S++ + +++ S D L +K
Sbjct: 182 SYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCS--DDLTLK 238
>AT2G26060.1 | Symbols: emb1345 | Transducin/WD40 repeat-like
superfamily protein | chr2:11102400-11105127 FORWARD
LENGTH=352
Length = 352
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
Query: 139 VGEFDGHSRRVLSCAYKPTRPFR------IVTCGEDFLVNFYEGPPFRFKQS-----HRD 187
+ + +GH+ RV S A+ P + +C D V +E +
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 188 HSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSG------EKIGELSSEGGHTGSIYAVS 241
H+ V +SP G + L+ S FDG +G + +S+ GH + +VS
Sbjct: 73 HTRTVRSCAWSPSG-QLLATAS------FDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 242 WSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSGGVEDM-LVGCLWLNEYIVAV 300
W+ G + T S DKS +W++ E N LT G +D+ +V + + +
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLT----GHTQDVKMVQWHPTMDVLFSC 181
Query: 301 SLGGTISIFLSSDLD-------KAPTSFSGHMKNVSSLTILKSNPRILLSSSYDGLIVK 352
S TI ++ S D D S +GH V S++ + +++ S D L +K
Sbjct: 182 SYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCS--DDLTLK 238
>AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kinase
1C | chr3:6211109-6212371 REVERSE LENGTH=326
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 57 HAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDL---QWSPDG 113
H++ S +G++ S G +R+W D + R G D+ +S D
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLW----DLATGETTRRFVGHTKDVLSVAFSTDN 117
Query: 114 LRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKP-TRPFRIVTCGEDFLVN 172
+IV+ + + + E DGH V + P T IV+ D V
Sbjct: 118 RQIVSASRDRTIKLWNTLG-ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 173 FYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGG 232
+ + + S HS ++N V SPDGS S G D +++D G+K+ L E G
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAG 234
Query: 233 HTGSIYAVSWSPDGKQVLTVSADKSAKVWDI 263
I+++ +SP+ + L + + S ++WD+
Sbjct: 235 SI--IHSLCFSPN-RYWLCAATENSIRIWDL 262
>AT1G18080.1 | Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD40
repeat-like superfamily protein | chr1:6222325-6223901
FORWARD LENGTH=327
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 69 NGEWVASADSSGTVRIWG-TRNDFVLKKEFRVLSGR---IDDLQWSPDGLRIVACGDAKG 124
N + + SA ++ +W T++D R L+G ++D+ S DG + G G
Sbjct: 27 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDG 85
Query: 125 KSFVRAFMWD--SGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFLVNFYEG---PPF 179
+ +WD +G + F GH++ VLS A+ +IV+ D + + +
Sbjct: 86 E----LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKY 140
Query: 180 RFKQSHRDHSNFVNCVRYSPDGSK--FLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSI 237
+ H ++V+CVR+SP+ + +S DK +++ + + L+ GHTG +
Sbjct: 141 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA---GHTGYV 197
Query: 238 YAVSWSPDGKQVLTVSADKSAKVWDISE 265
V+ SPDG + D +WD++E
Sbjct: 198 STVAVSPDGSLCASGGKDGVVLLWDLAE 225
>AT3G13340.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:4332370-4334603 FORWARD LENGTH=447
Length = 447
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 192 VNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLT 251
VN SPDG VG + G+I D +G+ + LS GH +A +W PDG T
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLS---GHLDFSFASAWHPDGVTFST 336
Query: 252 VSADKSAKVWDI 263
+ DK+ +VWDI
Sbjct: 337 GNQDKTCRVWDI 348
>AT3G13340.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:4332370-4334603 FORWARD LENGTH=447
Length = 447
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 192 VNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLT 251
VN SPDG VG + G+I D +G+ + LS GH +A +W PDG T
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLS---GHLDFSFASAWHPDGVTFST 336
Query: 252 VSADKSAKVWDI 263
+ DK+ +VWDI
Sbjct: 337 GNQDKTCRVWDI 348
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 51 VSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWS 110
V + H + F P GE++AS S ++IW R ++ ++ S I ++++
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQT-YKGHSRGISTIRFT 151
Query: 111 PDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFL 170
PDG +V+ G + V+ + +G + EF H + S + P F + T D
Sbjct: 152 PDGRWVVSGG---LDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE-FLLATGSADRT 207
Query: 171 VNFYEGPPFRFKQSHRDHSNFVNCVRYSPDG 201
V F++ F S R + V +++ PDG
Sbjct: 208 VKFWDLETFELIGSTRPEATGVRSIKFHPDG 238
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 51 VSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSGRIDDLQWS 110
V + H + F P GE++AS S ++IW R ++ ++ S I ++++
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQT-YKGHSRGISTIRFT 151
Query: 111 PDGLRIVACGDAKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRIVTCGEDFL 170
PDG +V+ G + V+ + +G + EF H + S + P F + T D
Sbjct: 152 PDGRWVVSGG---LDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE-FLLATGSADRT 207
Query: 171 VNFYEGPPFRFKQSHRDHSNFVNCVRYSPDG 201
V F++ F S R + V +++ PDG
Sbjct: 208 VKFWDLETFELIGSTRPEATGVRSIKFHPDG 238
>AT1G49540.2 | Symbols: ELP2, AtELP2 | elongator protein 2 |
chr1:18333767-18337382 REVERSE LENGTH=840
Length = 840
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 186 RDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSE-----GGHTGSIYAV 240
+ HS V + +S D + LSV D+ +F + + GE+S + H I+A
Sbjct: 644 QSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDN-GEVSHKLMAKVEAHKRIIWAC 702
Query: 241 SWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSG 281
SW+P G Q T S DK+ K+W + +N+ ++K+ L P G
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSV--ENDARIKQILVLPPFG 741
>AT1G49540.1 | Symbols: ELP2, AtELP2 | elongator protein 2 |
chr1:18333767-18337382 REVERSE LENGTH=838
Length = 838
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 186 RDHSNFVNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSE-----GGHTGSIYAV 240
+ HS V + +S D + LSV D+ +F + + GE+S + H I+A
Sbjct: 642 QSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDN-GEVSHKLMAKVEAHKRIIWAC 700
Query: 241 SWSPDGKQVLTVSADKSAKVWDISEDNNGKVKKTLTCPGSG 281
SW+P G Q T S DK+ K+W + +N+ ++K+ L P G
Sbjct: 701 SWNPFGHQFATSSRDKTVKIWSV--ENDARIKQILVLPPFG 739
>AT4G38480.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:18003957-18006002 FORWARD LENGTH=471
Length = 471
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 488 LEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKLKNMLYHSARINCLAWSP-- 545
L+KH+G ++ + ++ D + SG +R+ ++WD + VKL H I + P
Sbjct: 51 LDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFS 110
Query: 546 DSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFS--DEFSLVSSGEDAFIR 603
D R I T + D V +I + ++ G H G V+ L FS + GED ++
Sbjct: 111 DDRTIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVK 170
Query: 604 VWKI 607
+ +
Sbjct: 171 HFDL 174
>AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1058
Length = 1058
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 448 GFTVSATAVSPDGSEAIIGGQDGKLHIYSISG--------DTFEEE-AVLEKHRGAISVI 498
G + + V P+G GG D K+ I+++ DT E A L H G+++ +
Sbjct: 13 GLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLATLRDHFGSVNCV 72
Query: 499 RYSPDFSMFASGDVNREAVVWDRA------------SRDVK----LKNMLYHSARINCLA 542
R++ + ASG ++ + +R + DV+ + + H+A + L
Sbjct: 73 RWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLN 132
Query: 543 WSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSS-GEDAF 601
WSPD +A+GSLD V I+ + + T+ HL V G+ + S ++S +D
Sbjct: 133 WSPDDSMLASGSLDNTVHIWNMRTGMCT--TVLRGHLSLVKGVTWDPIGSFIASQSDDKT 190
Query: 602 IRVWKIT 608
+ +W+ +
Sbjct: 191 VIIWRTS 197
>AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1040
Length = 1040
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 448 GFTVSATAVSPDGSEAIIGGQDGKLHIYSISG--------DTFEEE-AVLEKHRGAISVI 498
G + + V P+G GG D K+ I+++ DT E A L H G+++ +
Sbjct: 13 GLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLATLRDHFGSVNCV 72
Query: 499 RYSPDFSMFASGDVNREAVVWDRA------------SRDVK----LKNMLYHSARINCLA 542
R++ + ASG ++ + +R + DV+ + + H+A + L
Sbjct: 73 RWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLN 132
Query: 543 WSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVFSDEFSLVSS-GEDAF 601
WSPD +A+GSLD V I+ + + T+ HL V G+ + S ++S +D
Sbjct: 133 WSPDDSMLASGSLDNTVHIWNMRTGMCT--TVLRGHLSLVKGVTWDPIGSFIASQSDDKT 190
Query: 602 IRVWKIT 608
+ +W+ +
Sbjct: 191 VIIWRTS 197
>AT5G56190.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:22742654-22744909 FORWARD LENGTH=447
Length = 447
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 192 VNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLT 251
VN SPDG VG D G++ D +G+ IG L GH +A +W P+G T
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLK---GHLDYSFASAWHPNGVTFAT 336
Query: 252 VSADKSAKVWD 262
+ DK+ ++WD
Sbjct: 337 GNQDKTCRIWD 347
>AT3G18140.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:6212743-6214567 REVERSE LENGTH=305
Length = 305
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 32/253 (12%)
Query: 43 INLQNPLQVSVYGEHAYPATVARFSPNGEWVASADSSGTVRIWGTRNDFVLKKEFRVLSG 102
+N +P V Y H F + +W+ S GTV+IW R +KE+ ++
Sbjct: 63 VNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGC-QKEYESVAA 121
Query: 103 RIDDLQWSPDGLRIVACGDAKGKSFVRAFMWDSGTN------VGEFDGHSRRVLSCAYKP 156
++ + P+ +++ GD G V WD N V E D + R L+ +
Sbjct: 122 -VNTVVLHPNQTELIS-GDQNGNIRV----WDLRANSCSCELVPEVDT-AVRSLTVMWDG 174
Query: 157 TRPFRIVTCGEDFLVNFYEGP-------PFRFKQSHRDHSNFVNCVRYSPDGSKFLSVGS 209
T G ++ G P Q+H H + C+ SP +K+L+ S
Sbjct: 175 TMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGH--ILKCL-LSP-ANKYLATAS 230
Query: 210 DKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLTVSADKSAKVWDISEDNNG 269
+ + G K+ ++ + GH ++ +S DG+ ++T S+D +A++W +
Sbjct: 231 SDKTVKIWNVDGFKLEKVLT--GHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEV 288
Query: 270 KV-----KKTLTC 277
KV K T+ C
Sbjct: 289 KVYQGHHKATVCC 301
>AT5G56190.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:22742563-22744909 FORWARD LENGTH=441
Length = 441
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 192 VNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLT 251
VN SPDG VG D G++ D +G+ IG L GH +A +W P+G T
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLK---GHLDYSFASAWHPNGVTFAT 330
Query: 252 VSADKSAKVWD 262
+ DK+ ++WD
Sbjct: 331 GNQDKTCRIWD 341
>AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-40
repeat family protein | chr4:16044545-16046590 REVERSE
LENGTH=457
Length = 457
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 469 DGKLHIYSISGDTFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKL 528
D ++++ S + E +++ +G ++ I ++PD A G N E +WD AS + +L
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSAS-NRQL 217
Query: 529 KNML-YHSARINCLAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVF 587
+ + H +R+ LAW ++ + TG +D +I ++ + T +G H V GL +
Sbjct: 218 RTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRG-HTQEVCGLKW 274
Query: 588 SDE-FSLVSSGEDAFIRVW 605
S L S G D + +W
Sbjct: 275 SGSGQQLASGGNDNVVHIW 293
>AT1G55680.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:20804988-20807294 REVERSE LENGTH=445
Length = 445
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 192 VNCVRYSPDGSKFLSVGSDKRGIIFDGKSGEKIGELSSEGGHTGSIYAVSWSPDGKQVLT 251
VN SPDG VG + ++ D +G+ + LS GH +A +W PDG T
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLS---GHLDFSFASAWHPDGFTFST 334
Query: 252 VSADKSAKVWDI 263
+ DK+ +VWDI
Sbjct: 335 GNQDKTCRVWDI 346
>AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041233-16043180 REVERSE
LENGTH=447
Length = 447
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 469 DGKLHIYSISGDTFEEEAVLEKHRGAISVIRYSPDFSMFASGDVNREAVVWDRASRDVKL 528
D ++++ S + E +++ +G ++ I ++PD A G N E +WD AS + +L
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSAS-NRQL 207
Query: 529 KNML-YHSARINCLAWSPDSRRIATGSLDTCVIIYEIDQPASSRVTIKGAHLGGVYGLVF 587
+ + H +R+ LAW ++ + TG +D +I ++ + T +G H V GL +
Sbjct: 208 RTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRG-HTQEVCGLKW 264
Query: 588 SDE-FSLVSSGEDAFIRVW 605
S L S G D + +W
Sbjct: 265 SGSGQQLASGGNDNVVHIW 283