Miyakogusa Predicted Gene

Lj4g3v3114350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114350.1 Non Chatacterized Hit- tr|H2N132|H2N132_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=PEX3
PE=,26.77,1e-18,coiled-coil,NULL; Peroxin-3,Peroxin-3; AMINO ACID
TRANSPORTER,NULL;
seg,NULL,NODE_34779_length_2096_cov_29.596851.path2.1
         (369 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48635.1 | Symbols: PEX3, PEX3-2 | peroxin 3 | chr1:17983951-...   399   e-111
AT1G48635.2 | Symbols: PEX3, PEX3-2 | peroxin 3 | chr1:17983951-...   380   e-106
AT3G18160.1 | Symbols: PEX3-1 | peroxin 3-1 | chr3:6220918-62229...   373   e-103
AT3G18160.3 | Symbols: PEX3-1 | peroxin 3-1 | chr3:6220918-62229...   363   e-100
AT3G18160.2 | Symbols: PEX3-1 | peroxin 3-1 | chr3:6221322-62229...   330   1e-90

>AT1G48635.1 | Symbols: PEX3, PEX3-2 | peroxin 3 |
           chr1:17983951-17985966 FORWARD LENGTH=364
          Length = 364

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/367 (53%), Positives = 259/367 (70%), Gaps = 10/367 (2%)

Query: 4   VRDFWRRHRRKLYLTAGVFGGGYFLYKLYDTHXXXXXXXXXXXXXXXXXXXXIKAQIQAH 63
           VR FWR+HRRK+ +TAG  G GY LYKLY++H                    IK Q++AH
Sbjct: 4   VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63

Query: 64  FENIQRISDTITLPHAMHNLSCRIAQELDLSHLLERLIQGKGQPTTLTQSEKLDLWGKLK 123
           FE+IQ I D+ TLPHAM  LS RI++E+D+SH+++RL QGKG    L+  EKL LW +LK
Sbjct: 64  FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELK 120

Query: 124 ILSFTRMALSIWATILLSLYTKVQVNILGRHLYIDTARNLGISNSMESGDVVDREDQQKF 183
           ILSFTRM LS+W+  +LSLY +VQVNILGRHLY+DTAR LG S+ +E  D++DR+D+QKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180

Query: 184 LGTADFLSQHGMPALISDMEAATKEVIKGKQLSSLFNNTTLHETIMQILDTFMSMGSPHS 243
           L +ADFL  + MP+LISDM+ + +EV+KGKQL  +     L ET+MQI+D FMS GSPH 
Sbjct: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240

Query: 244 WIKY-MMPEDVR-SHSITAGNDETVPYDVTEFEQLMVEVRAVLSSAEFGSIVEIALKVVV 301
           W+ Y MMP+D + S + +  +DE     V++F QLMVE R VL S EF +IVEI+LK   
Sbjct: 241 WVDYLMMPQDTKLSRTTSDSSDEA----VSKFHQLMVETREVLISTEFTNIVEISLKCFT 296

Query: 302 DKLVELMGAKF-GGNLTTGLPLARVLPQVAQMCPFLLEEPSKNQFIQVIKNMQEVELFFT 360
           D LVE M  +   G L TG PLA+VLPQ+ +    +  EPSKN+F+Q+I+++ EV+LFFT
Sbjct: 297 DVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFT 356

Query: 361 LLYANMP 367
           LLYANMP
Sbjct: 357 LLYANMP 363


>AT1G48635.2 | Symbols: PEX3, PEX3-2 | peroxin 3 |
           chr1:17983951-17985966 FORWARD LENGTH=400
          Length = 400

 Score =  380 bits (976), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/403 (49%), Positives = 259/403 (64%), Gaps = 46/403 (11%)

Query: 4   VRDFWRRHRRKLYLTAGVFGGGYFLYKLYDTHXXXXXXXXXXXXXXXXXXXXIKAQIQAH 63
           VR FWR+HRRK+ +TAG  G GY LYKLY++H                    IK Q++AH
Sbjct: 4   VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63

Query: 64  FENIQRISDTITLPHAMHNLSCRIAQELDLSHLLERLIQGKGQPTTLTQSEKLDLWGKLK 123
           FE+IQ I D+ TLPHAM  LS RI++E+D+SH+++RL QGKG    L+  EKL LW +LK
Sbjct: 64  FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELK 120

Query: 124 ILSFTRMALSIWATILLSLYTKVQVNILGRHLYIDTARNLGISNSM-------------- 169
           ILSFTRM LS+W+  +LSLY +VQVNILGRHLY+DTAR LG S+ +              
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLCTLLISSPTSYFSG 180

Query: 170 ----------------------ESGDVVDREDQQKFLGTADFLSQHGMPALISDMEAATK 207
                                 E  D++DR+D+QKFL +ADFL  + MP+LISDM+ + +
Sbjct: 181 KLTGCSVKNFSRLPFKATAACPEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAE 240

Query: 208 EVIKGKQLSSLFNNTTLHETIMQILDTFMSMGSPHSWIKY-MMPEDVR-SHSITAGNDET 265
           EV+KGKQL  +     L ET+MQI+D FMS GSPH W+ Y MMP+D + S + +  +DE 
Sbjct: 241 EVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEA 300

Query: 266 VPYDVTEFEQLMVEVRAVLSSAEFGSIVEIALKVVVDKLVELMGAKF-GGNLTTGLPLAR 324
               V++F QLMVE R VL S EF +IVEI+LK   D LVE M  +   G L TG PLA+
Sbjct: 301 ----VSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAK 356

Query: 325 VLPQVAQMCPFLLEEPSKNQFIQVIKNMQEVELFFTLLYANMP 367
           VLPQ+ +    +  EPSKN+F+Q+I+++ EV+LFFTLLYANMP
Sbjct: 357 VLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 399


>AT3G18160.1 | Symbols: PEX3-1 | peroxin 3-1 | chr3:6220918-6222923
           FORWARD LENGTH=358
          Length = 358

 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/365 (50%), Positives = 252/365 (69%), Gaps = 12/365 (3%)

Query: 4   VRDFWRRHRRKLYLTAGVFGGGYFLYKLYDTHXXXXXXXXXXXXXXXXXXXXIKAQIQAH 63
           VR  WR+HRRK+ +T    G GY LYKLY+ H                    IK Q++AH
Sbjct: 4   VRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAH 63

Query: 64  FENIQRISDTITLPHAMHNLSCRIAQELDLSHLLERLIQGKGQPTTLTQSEKLDLWGKLK 123
           F+NIQ I+DT TLPHA+H+LS R+ +E+D+S ++++L +GKG    L  SEKL LW +LK
Sbjct: 64  FDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELK 120

Query: 124 ILSFTRMALSIWATILLSLYTKVQVNILGRHLYIDTARNLGISNSMESGDVVDREDQQKF 183
           ILSFTRM LS+W+  +LSLY +VQVNILGRHLYIDTAR LG S+ ++  D+++R+D+QKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180

Query: 184 LGTADFLSQHGMPALISDMEAATKEVIKGKQLSSLFNNTTLHETIMQILDTFMSMGSPHS 243
           L +ADFL+  GMP+LIS+M+ A KEV+KGKQL  +   + L ET+M+ILD FMS GSPH 
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240

Query: 244 WIKY-MMPEDVRSHSITAGNDETVPYDVTEFEQLMVEVRAVLSSAEFGSIVEIALKVVVD 302
           W+ Y MM +D  +    + +D T    VT+F  L+ E R VL+S +F ++ EI+LK    
Sbjct: 241 WVDYLMMSQDATTD--VSSSDAT----VTKFHLLITETREVLTSNDFSNVAEISLKCCAV 294

Query: 303 KLVELMGAKFGGNLTTGLPLARVLPQVAQMCPFLLEEPSKNQFIQVIKNMQEVELFFTLL 362
            LVE M  + G  L TG+ LA++LPQ+ +  P +  EP KN+F+Q+I+++ EV+LFFTLL
Sbjct: 295 ALVEEMETQTG--LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLL 352

Query: 363 YANMP 367
           YANMP
Sbjct: 353 YANMP 357


>AT3G18160.3 | Symbols: PEX3-1 | peroxin 3-1 | chr3:6220918-6222923
           FORWARD LENGTH=376
          Length = 376

 Score =  363 bits (932), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/359 (50%), Positives = 248/359 (69%), Gaps = 12/359 (3%)

Query: 10  RHRRKLYLTAGVFGGGYFLYKLYDTHXXXXXXXXXXXXXXXXXXXXIKAQIQAHFENIQR 69
           +HRRK+ +T    G GY LYKLY+ H                    IK Q++AHF+NIQ 
Sbjct: 28  KHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQM 87

Query: 70  ISDTITLPHAMHNLSCRIAQELDLSHLLERLIQGKGQPTTLTQSEKLDLWGKLKILSFTR 129
           I+DT TLPHA+H+LS R+ +E+D+S ++++L +GKG    L  SEKL LW +LKILSFTR
Sbjct: 88  IADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELKILSFTR 144

Query: 130 MALSIWATILLSLYTKVQVNILGRHLYIDTARNLGISNSMESGDVVDREDQQKFLGTADF 189
           M LS+W+  +LSLY +VQVNILGRHLYIDTAR LG S+ ++  D+++R+D+QKFL +ADF
Sbjct: 145 MVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKFLTSADF 204

Query: 190 LSQHGMPALISDMEAATKEVIKGKQLSSLFNNTTLHETIMQILDTFMSMGSPHSWIKY-M 248
           L+  GMP+LIS+M+ A KEV+KGKQL  +   + L ET+M+ILD FMS GSPH W+ Y M
Sbjct: 205 LATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLM 264

Query: 249 MPEDVRSHSITAGNDETVPYDVTEFEQLMVEVRAVLSSAEFGSIVEIALKVVVDKLVELM 308
           M +D  +    + +D T    VT+F  L+ E R VL+S +F ++ EI+LK     LVE M
Sbjct: 265 MSQDATTD--VSSSDAT----VTKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEM 318

Query: 309 GAKFGGNLTTGLPLARVLPQVAQMCPFLLEEPSKNQFIQVIKNMQEVELFFTLLYANMP 367
             + G  L TG+ LA++LPQ+ +  P +  EP KN+F+Q+I+++ EV+LFFTLLYANMP
Sbjct: 319 ETQTG--LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 375


>AT3G18160.2 | Symbols: PEX3-1 | peroxin 3-1 | chr3:6221322-6222923
           FORWARD LENGTH=304
          Length = 304

 Score =  330 bits (845), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 163/310 (52%), Positives = 228/310 (73%), Gaps = 12/310 (3%)

Query: 59  QIQAHFENIQRISDTITLPHAMHNLSCRIAQELDLSHLLERLIQGKGQPTTLTQSEKLDL 118
           +++AHF+NIQ I+DT TLPHA+H+LS R+ +E+D+S ++++L +GKG    L  SEKL L
Sbjct: 5   RMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQL 61

Query: 119 WGKLKILSFTRMALSIWATILLSLYTKVQVNILGRHLYIDTARNLGISNSMESGDVVDRE 178
           W +LKILSFTRM LS+W+  +LSLY +VQVNILGRHLYIDTAR LG S+ ++  D+++R+
Sbjct: 62  WNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERD 121

Query: 179 DQQKFLGTADFLSQHGMPALISDMEAATKEVIKGKQLSSLFNNTTLHETIMQILDTFMSM 238
           D+QKFL +ADFL+  GMP+LIS+M+ A KEV+KGKQL  +   + L ET+M+ILD FMS 
Sbjct: 122 DEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMST 181

Query: 239 GSPHSWIKY-MMPEDVRSHSITAGNDETVPYDVTEFEQLMVEVRAVLSSAEFGSIVEIAL 297
           GSPH W+ Y MM +D  +    + +D T    VT+F  L+ E R VL+S +F ++ EI+L
Sbjct: 182 GSPHHWVDYLMMSQDATTD--VSSSDAT----VTKFHLLITETREVLTSNDFSNVAEISL 235

Query: 298 KVVVDKLVELMGAKFGGNLTTGLPLARVLPQVAQMCPFLLEEPSKNQFIQVIKNMQEVEL 357
           K     LVE M  + G  L TG+ LA++LPQ+ +  P +  EP KN+F+Q+I+++ EV+L
Sbjct: 236 KCCAVALVEEMETQTG--LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKL 293

Query: 358 FFTLLYANMP 367
           FFTLLYANMP
Sbjct: 294 FFTLLYANMP 303