Miyakogusa Predicted Gene

Lj4g3v3114270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114270.1 Non Chatacterized Hit- tr|G7LD87|G7LD87_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.69,0,NT-C2,EEIG1/EHBP1 N-terminal domain;
seg,NULL,NODE_29726_length_2437_cov_153.222412.path2.1
         (816 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G42550.1 | Symbols: PMI1 | plastid movement impaired1 | chr1:...   674   0.0  
AT5G20610.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   117   5e-26
AT5G26160.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   111   3e-24

>AT1G42550.1 | Symbols: PMI1 | plastid movement impaired1 |
           chr1:15977131-15979734 FORWARD LENGTH=843
          Length = 843

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/790 (51%), Positives = 514/790 (65%), Gaps = 61/790 (7%)

Query: 39  LVLPRTSVPIPPAQDDDHSHNTTKVDAESSTNKLRSRARRMSLSPWRSRPKLE-EEDDGI 97
           L LPR+SVP      D+     +   AE  T   + RARR+SLSPWRSRPKLE EE++ +
Sbjct: 42  LALPRSSVPSLVTSADE----VSTARAEDLTVS-KPRARRLSLSPWRSRPKLEVEEEENV 96

Query: 98  ESAKEGIKKLDVMSTSGGGDNNEKKGIWKWKPLRALSHIGMQKLSCLFSVEVVTAQGLPS 157
             +   +KK +  S+SG G   EKKGIW WKP+R L  IGMQKLSCL SVEVV AQ LP+
Sbjct: 97  TQSNRIVKKPE-ESSSGSGVKEEKKGIWNWKPIRGLVRIGMQKLSCLLSVEVVAAQNLPA 155

Query: 158 SMNGLRLSVCVRKKETKEGAVKTMPSRVAQGAADFEETLFIRCHAYYSHGGSGKQKLKFE 217
           SMNGLRL VCVRKKETK+GAV+TMP RV+QG+ADFEETLFI+CH YYS         KFE
Sbjct: 156 SMNGLRLGVCVRKKETKDGAVQTMPCRVSQGSADFEETLFIKCHVYYSPANGKGSPAKFE 215

Query: 218 PRPFSIYLFAVDAQELDFGRSSVDLSELIGKSIEE-NQQGSRVRQWDTSFGLLGKAKGGE 276
            RPF  YLFAVDA+EL+FGR  VDLSELI +S+E+ N +G+RVRQWD ++GL GKAKGGE
Sbjct: 216 ARPFLFYLFAVDAKELEFGRHVVDLSELIQESVEKMNYEGARVRQWDMNWGLSGKAKGGE 275

Query: 277 LVLKLGFQIMEKDGGVEIYSP---VENXXXXXXXXXXXXXXXXXXXXXXXMPSPRMASRN 333
           L LKLGFQIMEKDGG  IYS                              +PSP+M SR+
Sbjct: 276 LALKLGFQIMEKDGGAGIYSKQGEFGMKPSSKPKNFANSFGRKQSKTSFSVPSPKMTSRS 335

Query: 334 GPWTPSQAATG-GDIQGMDDLNLDDPNPVQDSSSSIQKVEESKEQ-EEDSDLPDFEVVDK 391
             WTP+       D  GM+ LNLD+P   +     +QK ++ +++ E+D + PDFEVVDK
Sbjct: 336 EAWTPASGVESVSDFHGMEHLNLDEPE-EKPEEKPVQKNDKPEQRAEDDQEEPDFEVVDK 394

Query: 392 GVEVQXXXXXXXXXXXXXXXXXXXXXGEDREVVKEI---VHDHLHLNRLSELDSIAQQIK 448
           GVE                       GE    +KE    V D  H+ RL+ELDSIA+QIK
Sbjct: 395 GVEFDDDLETEKSDGTI---------GERSVEMKEQHVNVDDPRHIMRLTELDSIAKQIK 445

Query: 449 ALESMMGEDDKFMKIEDETESQSQRLDADEETVTREFLQMLEDQDSGGYSNLFNQPEIPP 508
           ALESMM ++        + E++SQRLD +E+TVT+EFLQ+LED+++      F Q ++  
Sbjct: 446 ALESMMKDESDG----GDGETESQRLDEEEQTVTKEFLQLLEDEETEKLK--FYQHKMDI 499

Query: 509 LQLEEGNNDSSADDGESNVYLPDLGKGLGCVVQTRDGGFLASMNPLDTAVSRKDTPKLAM 568
            +L  G    S DD ES  YL DLGKG+GCVVQTRDGG+L SMNP DT V RKDTPKL M
Sbjct: 500 SELRSGE---SVDD-ESENYLSDLGKGIGCVVQTRDGGYLVSMNPFDTVVMRKDTPKLVM 555

Query: 569 QMSKPFV-LASHESLSGFELFQKLAGIGLDELSSQVLSLMPIDELMGKTAEQVAFEGIAS 627
           Q+SK  V L      +GFELF ++AG G +EL S++ SLM IDELMGKT EQVAFEGIAS
Sbjct: 556 QISKQIVVLPEAGPATGFELFHRMAGSG-EELESKISSLMAIDELMGKTGEQVAFEGIAS 614

Query: 628 AIIQGRSKEGASSSAARIVSSLKSMGIMMSSGRKERISTGLWNVDEESVT-AEKLLTLSM 686
           AIIQGR+KE A++SAAR V+++K+M   MSSGR+ERI TG+WNV+E  +T AE++L +S+
Sbjct: 615 AIIQGRNKERANTSAARTVAAVKTMANAMSSGRRERIMTGIWNVEENPLTSAEEVLAVSL 674

Query: 687 QKIESMTVEALKIQADMAEEEAPFDVSALSSKKGDSTGKDLLASAVSLEDWIRDQSHNKS 746
           QK+E M VE LKIQADM ++EAPF+VSA   +      K+ L S + LE+W ++      
Sbjct: 675 QKLEEMVVEGLKIQADMVDDEAPFEVSAAKGQ------KNPLESTIPLEEWQKEHRTQ-- 726

Query: 747 APKSESEPERVTLILVVQVRDPIRRYEAVGGPVMVVIHATSDNTKGNEEEKRFKVMSMHV 806
                   +++T++  VQ+RDP RRYEAVGG V+V + A  +  KG       KV S+H+
Sbjct: 727 --------QKLTVLATVQLRDPTRRYEAVGGTVVVAVQAEEEEEKG------LKVGSLHI 772

Query: 807 GGFKVRSATK 816
           GG K  +A K
Sbjct: 773 GGVKKDAAEK 782


>AT5G20610.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins
           in 180 species: Archae - 6; Bacteria - 105; Metazoa -
           264; Fungi - 89; Plants - 167; Viruses - 5; Other
           Eukaryotes - 282 (source: NCBI BLink). |
           chr5:6969184-6972794 FORWARD LENGTH=1164
          Length = 1164

 Score =  117 bits (292), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 3/190 (1%)

Query: 529 LPDLGKGLGCVVQTRDGGFLASMNPLDTAVSRKDTPKLAMQMSKPFVLASHESLSGFELF 588
           LP LG GLG VVQT++GGFL SMNPL    S+     L MQ+S P V+ +       E+ 
Sbjct: 701 LPPLGDGLGPVVQTKNGGFLRSMNPLLFRNSKAGG-SLIMQVSTPVVVPAEMGSGIMEIL 759

Query: 589 QKLAGIGLDELSSQVLSLMPIDELMGKTAEQVAFEGIASAIIQGRSK--EGASSSAARIV 646
           QKLA  G+++LS Q   +MP+D++ GKT E+V +E   +  I  R    E  S  A+  V
Sbjct: 760 QKLATAGIEKLSMQANKVMPLDDITGKTMEEVLWETSPTIDIGDRDHVSERESGDASGFV 819

Query: 647 SSLKSMGIMMSSGRKERISTGLWNVDEESVTAEKLLTLSMQKIESMTVEALKIQADMAEE 706
              +      +  +K   S+G  N D E V+ E L  L+M +IE++++E L+IQ+ M++E
Sbjct: 820 RGGERRTSFAAKPKKFGSSSGNNNFDSEYVSLEDLAPLAMDQIEALSLEGLRIQSGMSDE 879

Query: 707 EAPFDVSALS 716
           +AP D++A S
Sbjct: 880 DAPSDITAQS 889



 Score =  114 bits (284), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 5/177 (2%)

Query: 110 MSTSGGGDNNEKKGIWKWKPLRALSHIGMQKLSCLFSVEVVTAQGLPSSMNGLRLSVCVR 169
           +S S   +  EKK  W W PLRA++H+  ++ +C FS +V + +GLP     L L+V  +
Sbjct: 47  LSRSNLAEPKEKKSFWNW-PLRAINHVRNRRFNCCFSAQVHSIEGLPPIFQDLSLTVHWK 105

Query: 170 KKETKEGAVKTMPSRVAQGAADFEETLFIRCHAYYSHGGSGKQKLKFEPRPFSIYLFAVD 229
           +++    ++ T P++V+ G A+F++ L   C  Y S  G      K+E + F +Y+  V 
Sbjct: 106 RRDE---SLSTRPAKVSNGRAEFKDKLTHTCSVYGSRSGP-HHSAKYEAKHFLLYVSLVG 161

Query: 230 AQELDFGRSSVDLSELIGKSIEENQQGSRVRQWDTSFGLLGKAKGGELVLKLGFQIM 286
           + E+D G+  +DL++L+  ++EE Q      +W T+F L GKA G  L +  G+ ++
Sbjct: 162 SPEIDLGKHRMDLTKLLPLTLEELQDEKSSGKWSTTFQLSGKANGATLSMSFGYTVV 218


>AT5G26160.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G20610.1); Has 197 Blast hits to 158 proteins
           in 44 species: Archae - 0; Bacteria - 14; Metazoa - 28;
           Fungi - 15; Plants - 117; Viruses - 2; Other Eukaryotes
           - 21 (source: NCBI BLink). | chr5:9143269-9146312
           FORWARD LENGTH=976
          Length = 976

 Score =  111 bits (277), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 7/172 (4%)

Query: 118 NNEKKGI--WKWK-PLRALSHIGMQKLSCLFSVEVVTAQGLPSSMNGLRLSVCVRKKETK 174
           N +KK +  W WK PL A++H G ++    F + V + +GLP +++G +L V  ++K+  
Sbjct: 63  NKKKKSLVPWNWKKPLNAIAHFGQRRFDVCFLLHVHSIEGLPLNLDGTKLVVQWKRKDE- 121

Query: 175 EGAVKTMPSRVAQGAADFEETLFIRCHAYYSHGGSGKQKLKFEPRPFSIYLFAVDAQELD 234
              + T PS+V QG A+FEETL  RC  Y S  G  +   K++ + F IY+  VDA  L 
Sbjct: 122 --VMTTQPSKVLQGTAEFEETLTHRCSVYGSKHGPHRSA-KYQVKLFLIYVSPVDAPWLV 178

Query: 235 FGRSSVDLSELIGKSIEENQQGSRVRQWDTSFGLLGKAKGGELVLKLGFQIM 286
            G+  +DL+ ++  S+EE +     R+W+TSF L G A+   L L   + ++
Sbjct: 179 LGKHWIDLTRILPLSLEEMEGTRSTRKWNTSFKLSGLAESAVLNLSFDYSVV 230



 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)

Query: 529 LPDLGKGLGCVVQTRDGGFLASMNPLDTAVSRKDTPKLAMQMSKPFVLASHESLSGFELF 588
           LP LG  +G  V T+ GG + SMN L    S K+  +L MQ+S P VL S       E+ 
Sbjct: 588 LP-LGDNIGPSVWTKGGGCIRSMNHLLFRES-KEASQLIMQVSVPVVLVSELGSDILEIL 645

Query: 589 QKLAGIGLDELSSQVLSLMPIDELMGKTAEQVAFEGIASAIIQGRSKEGASSSAARIVSS 648
           Q  A  G++ L S+V +L+P++++MGKT  +V    +     +   ++ +  S   +V  
Sbjct: 646 QIFAASGIEGLCSEVNALIPLEDIMGKTIHEV----VDVTKFKRTGQDCSDKSKGVVVQK 701

Query: 649 LKSMGIMMSSGRKERISTGLWNVDEESVTAEKLLTLSMQKIESMTVEALKIQADMAEEEA 708
                 + SS  +   S    NV  E VT+     L++ +I  +++E LKIQ  M++++ 
Sbjct: 702 PPGQLHLCSSNEEFGSSMCPSNVPLEDVTS-----LAIDEIYILSIEGLKIQCSMSDQDP 756

Query: 709 PFDVSALSSKKGD-STGKDLLASAVSLEDWIR-DQS--HNK-----SAPKSESEPERVTL 759
           P   S ++ K  D S   +L+  +++L++W+R DQ    NK     S  K  +   ++TL
Sbjct: 757 P---SGIAPKPMDQSDALELIRFSLTLDEWLRLDQGMLENKDQDLASNGKGHTLRNKLTL 813

Query: 760 ILVVQVRDPIRRYEAVGGPVMVVIHA 785
            L V +RDP    E +G  ++ +I  
Sbjct: 814 ALQVLLRDPSLNNEPIGASMLALIQV 839