Miyakogusa Predicted Gene
- Lj4g3v3113910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3113910.1 Non Chatacterized Hit- tr|I1KQF3|I1KQF3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5204
PE=,64.32,0,RING/U-box,NULL; ZF_RING_2,Zinc finger, RING-type; Ring
finger,Zinc finger, RING-type; no descriptio,CUFF.52365.1
(349 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 182 3e-46
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 172 3e-43
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 118 5e-27
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 113 2e-25
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 111 6e-25
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 111 6e-25
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 111 6e-25
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 111 6e-25
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 108 6e-24
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 105 4e-23
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 105 4e-23
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 105 4e-23
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 105 4e-23
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 105 4e-23
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 103 2e-22
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 103 2e-22
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 96 3e-20
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 96 3e-20
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 96 3e-20
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 95 8e-20
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 95 8e-20
AT1G36950.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 1e-16
AT4G00070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 82 6e-16
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 8e-13
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 4e-10
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 60 3e-09
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 60 3e-09
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 9e-09
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 182/374 (48%), Gaps = 65/374 (17%)
Query: 12 VAEHIKWRRPRDQFRXXXXXXXXPISETD----PNPQIQSTRCKSTISALLLSTFSNEXX 67
+ +H++ +RPR+ PIS D P P S KS +S+ L
Sbjct: 15 IGQHMRLQRPRNH------RNLPPISTADEPLIPKP---SRVSKSAMSSFFL-------- 57
Query: 68 XXXPQAATSARSRKKSNFSAAAFRGLGCTAGASQQVSVPAAIRASADWQXXXXXXXXXXX 127
P+ ++KK N A+FRGLGCT ASQQVSVPA IR+SADW
Sbjct: 58 --LPET-----TKKKPN-GTASFRGLGCTTSASQQVSVPAVIRSSADWDASNFKIKKTKK 109
Query: 128 XXX---XXNCHGGMVD-------GSSATCVDFQDVWCGPGIGFSGXX----XXXXXXXXX 173
+ +GG + SS C DVWCGPG+GFS
Sbjct: 110 KNKNKGSSSYNGGSIKILSEASTSSSVACAAIPDVWCGPGVGFSTDAVVGGSIDTVVSDP 169
Query: 174 XRKNVSARGKIDVEKIA-----QRERSYSC--RHSVVTFPD---SADENVFTPPFEEPET 223
R+N+ R KID +K RE S S R S+ + +D + T E+ +
Sbjct: 170 PRRNIPVRRKIDGDKTNSNSNNHREGSSSLLPRRSLNQESNPYFDSDSSFLTSRAEQTDR 229
Query: 224 YYVRD--------SEIIMLQGSIVR---LNSQDRHRDLRLDVDNMSYEQLLELSERIGYV 272
Y+ +E++M+Q V L+S D+ RD+RL+VDNM+YEQLLEL ERIG+V
Sbjct: 230 YHRHLRLPYPDGLAEMMMMQNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGERIGHV 289
Query: 273 STGLKEEEMRKNIRKLQ-ISDDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQW 331
+TGL E++++ +RK++ D + D+ C ICQ +G L CGH +H C+ QW
Sbjct: 290 NTGLTEKQIKSCLRKVKPCRQDTTVADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQW 349
Query: 332 VEQKNFCPVCKRLV 345
+ +KN CPVCK +
Sbjct: 350 LVRKNSCPVCKTMA 363
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 182/372 (48%), Gaps = 47/372 (12%)
Query: 8 TTKTVAEHIKWRRPRDQ-FRXXXXXXXXPISETDPNPQIQSTR-CKSTISALLLSTFSNE 65
++ T+ EHI+ RR R+Q R P P Q R C S +S+
Sbjct: 2 SSTTIGEHIRLRRARNQTIRHLHAADDDPPLSHVVLPISQPNRFCNSAMSSFF------- 54
Query: 66 XXXXXPQAATSARSRKKSNFSAAAFRGLGC---TAGASQQVSVPAAIRASADWQX---XX 119
P ++++ +RKK + ++FRG+GC A A+Q+VSVP+ IR SAD
Sbjct: 55 ---PLPTSSSNESTRKKP-YQTSSFRGMGCYAAAAAAAQEVSVPSVIRYSADLDARIRKD 110
Query: 120 XXXXXXXXXXXXXNCHGGMVDGS----SATCVDFQDVWCGPGIGFSGXXXXXXXXXXXXR 175
G DGS S D DVWC PG+GFS
Sbjct: 111 KKKKKHKHKKKKKKNKGSYEDGSIRILSEEARDVIDVWCRPGLGFSTDAVIGRSVDPPRG 170
Query: 176 KNV-SARGKIDVEK----------------IAQRERSYSCRHSVVTFPDS--ADENVFTP 216
+N+ S+R KIDV+ + Q S+ +S TF S A+ + +
Sbjct: 171 RNIPSSRRKIDVDNNNYNHTLGSSVLPIRFLNQETHSHDIFNSDSTFVTSSRAEPTMLSS 230
Query: 217 P--FEEPETYYVRDSEIIMLQGSIVR---LNSQDRHRDLRLDVDNMSYEQLLELSERIGY 271
P +Y +E+ MLQ V +S+D + +LRLDVD+MSYEQLLEL +RIGY
Sbjct: 231 RCRGHLPRSYPDDLTEMRMLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLELGDRIGY 290
Query: 272 VSTGLKEEEMRKNIRKLQISDDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQW 331
V+TGLKE E+ + + K++ S + VD+ C+ICQ +G LNCGHS+H C++QW
Sbjct: 291 VNTGLKESEIHRCLGKIKPSVSHTLVDRKCSICQDEYEREDEVGELNCGHSFHVHCVKQW 350
Query: 332 VEQKNFCPVCKR 343
+ +KN CPVCK+
Sbjct: 351 LSRKNACPVCKK 362
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 80/121 (66%), Gaps = 4/121 (3%)
Query: 226 VRDSEIIMLQGSIV--RLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRK 283
+R ++++L SI+ + DR+RD+RLDVDNM+YE+LL L ERIG V TGL EE +
Sbjct: 513 LRLEDVMLLNQSIMLGAADIHDRYRDMRLDVDNMTYEELLSLEERIGDVCTGLNEETISN 572
Query: 284 NIR--KLQISDDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVC 341
++ K + S +SQ + C +CQ IGRL CGH +H QCI++W++QKN CP+C
Sbjct: 573 RLKQQKYKSSTRSSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPIC 632
Query: 342 K 342
K
Sbjct: 633 K 633
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
Query: 226 VRDSEIIMLQGSIV--RLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRK 283
+R ++++L S++ DR+RD+RLDVDNMSYE+LL L ERIG V TG+ EE +
Sbjct: 558 LRLEDVMLLNHSVLFDGATGHDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISN 617
Query: 284 NI--RKLQISDDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVC 341
+ RK + + + Q + C +CQ +G L CGH +H QCI++W++QKN CP+C
Sbjct: 618 RLKQRKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677
Query: 342 K 342
K
Sbjct: 678 K 678
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 222 ETYYVRDSEIIMLQGSIVRLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEM 281
E Y V D ++ QG DRHRD+RLDVDNMSYE+LL L ERIG VSTGL EE +
Sbjct: 542 EDYMVFDP--LIYQG---MAEMHDRHRDMRLDVDNMSYEELLALGERIGDVSTGLSEEVI 596
Query: 282 RKNIRKLQISDDASQVDKN---CTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFC 338
K +++ + + A+ ++ C +CQ +G L CGH +H C++QW+ KN C
Sbjct: 597 LKVMKQHKHTSSAAGSHQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLC 656
Query: 339 PVCKRLV 345
P+CK +
Sbjct: 657 PICKTVA 663
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 222 ETYYVRDSEIIMLQGSIVRLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEM 281
E Y V D ++ QG + DRHR++RLDVDNMSYE+LL L ERIG VSTGL EE +
Sbjct: 576 EDYMVFDP--LIYQG---MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI 630
Query: 282 RKNIRKLQ-ISDDASQVD-----KNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQK 335
K +++ + S S V+ + C ICQ +G L CGH +H CI+QWV K
Sbjct: 631 LKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIK 690
Query: 336 NFCPVCK 342
N CP+CK
Sbjct: 691 NLCPICK 697
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 222 ETYYVRDSEIIMLQGSIVRLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEM 281
E Y V D ++ QG + DRHR++RLDVDNMSYE+LL L ERIG VSTGL EE +
Sbjct: 576 EDYMVFDP--LIYQG---MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI 630
Query: 282 RKNIRKLQ-ISDDASQVD-----KNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQK 335
K +++ + S S V+ + C ICQ +G L CGH +H CI+QWV K
Sbjct: 631 LKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIK 690
Query: 336 NFCPVCK 342
N CP+CK
Sbjct: 691 NLCPICK 697
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 222 ETYYVRDSEIIMLQGSIVRLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEM 281
E Y V D ++ QG + DRHR++RLDVDNMSYE+LL L ERIG VSTGL EE +
Sbjct: 576 EDYMVFDP--LIYQG---MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI 630
Query: 282 RKNIRKLQ-ISDDASQVD-----KNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQK 335
K +++ + S S V+ + C ICQ +G L CGH +H CI+QWV K
Sbjct: 631 LKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIK 690
Query: 336 NFCPVCK 342
N CP+CK
Sbjct: 691 NLCPICK 697
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 13/125 (10%)
Query: 231 IIMLQGSIVR-LNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIR--- 286
+IM G ++ L+ D+HRD+RLD+DNMSYE+LL L ERIG VST L EE + K ++
Sbjct: 365 LIMETGLLLGGLSFHDQHRDMRLDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSI 424
Query: 287 ---------KLQISDDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNF 337
+ S ++ D C+ICQ +GRL+C H+YH +C+Q+W+ K++
Sbjct: 425 YQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSW 484
Query: 338 CPVCK 342
CP+CK
Sbjct: 485 CPICK 489
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
Query: 245 DRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRK--LQISDDASQV----- 297
D+HRD+RLD+DNMSYE+LL L +++G VST L EE + +++++ Q +D+ +
Sbjct: 411 DQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKD 470
Query: 298 -DKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
D C+ICQ +G + C H YH C+QQW+ KN+CP+CK
Sbjct: 471 DDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
Query: 245 DRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRK--LQISDDASQV----- 297
D+HRD+RLD+DNMSYE+LL L +++G VST L EE + +++++ Q +D+ +
Sbjct: 411 DQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKD 470
Query: 298 -DKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
D C+ICQ +G + C H YH C+QQW+ KN+CP+CK
Sbjct: 471 DDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 244 QDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRK--LQISDDASQV---- 297
D+HRD+RLD+DNMSYE+LL L E++G VST L EE + K+++ + +D++ +
Sbjct: 403 HDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNK 462
Query: 298 --DKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
D C+ICQ +G L C H YH C QQW+ KN+CP+CK
Sbjct: 463 DDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 244 QDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRK--LQISDDASQV---- 297
D+HRD+RLD+DNMSYE+LL L E++G VST L EE + K+++ + +D++ +
Sbjct: 403 HDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNK 462
Query: 298 --DKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
D C+ICQ +G L C H YH C QQW+ KN+CP+CK
Sbjct: 463 DDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 222 ETYYVRDSEIIMLQGSIVRLNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEM 281
E Y V D ++ QG + DRHR++RLDVDNMSYE+LL L ERIG VSTGL EE +
Sbjct: 576 EDYMVFDP--LIYQG---MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI 630
Query: 282 RKNIRKLQ-ISDDASQVD-----KNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQK 335
K +++ + S S V+ + C ICQ +G L CGH +H CI+QWV K
Sbjct: 631 LKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIK 690
Query: 336 NFCPVCK 342
N CP+ +
Sbjct: 691 NLCPIFR 697
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 11/112 (9%)
Query: 242 NSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRKLQIS------DDAS 295
N D HRD+RLD++ MSYE+LL LSERIG V+TGL EE+++ +++ S + +S
Sbjct: 372 NHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSS 431
Query: 296 QVDKN-----CTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
K+ CTICQ I L+CGH YH +C+++W+ KN CP+CK
Sbjct: 432 PRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 11/112 (9%)
Query: 242 NSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRKLQIS------DDAS 295
N D HRD+RLD++ MSYE+LL LSERIG V+TGL EE+++ +++ S + +S
Sbjct: 372 NHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSS 431
Query: 296 QVDKN-----CTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
K+ CTICQ I L+CGH YH +C+++W+ KN CP+CK
Sbjct: 432 PRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 214 FTPPFEEPETYYVRDSEIIMLQGSIVRL----NSQDRHRDLRLDVDNMSYEQLLELSERI 269
F PPF+E + SE M++ + N D HRD+RLD+DNMSYE+LL+L ERI
Sbjct: 400 FQPPFDEVALHERFSSEEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERI 459
Query: 270 GYVSTGLKEEEMRK-NIRKLQISDDASQVDKNCTICQXXXXXXXXIGRL-NCGHSYHYQC 327
G V+TGL + + + + ++ + C IC +G + CGH YH +C
Sbjct: 460 GSVNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRC 519
Query: 328 IQQWVEQKNFCPVCK 342
I++W+ KN CP+CK
Sbjct: 520 IKKWLSMKNSCPICK 534
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 214 FTPPFEEPETYYVRDSEIIMLQGSIVRL----NSQDRHRDLRLDVDNMSYEQLLELSERI 269
F PPF+E + SE M++ + N D HRD+RLD+DNMSYE+LL+L ERI
Sbjct: 400 FQPPFDEVALHERFSSEEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERI 459
Query: 270 GYVSTGLKEEEMRK-NIRKLQISDDASQVDKNCTICQXXXXXXXXIGRL-NCGHSYHYQC 327
G V+TGL + + + + ++ + C IC +G + CGH YH +C
Sbjct: 460 GSVNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRC 519
Query: 328 IQQWVEQKNFCPVCK 342
I++W+ KN CP+CK
Sbjct: 520 IKKWLSMKNSCPICK 534
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 214 FTPPFEEPETYYVRDSEIIMLQGSIVRL----NSQDRHRDLRLDVDNMSYEQLLELSERI 269
F PPF+E + SE M++ + N D HRD+RLD+DNMSYE+LL+L ERI
Sbjct: 453 FQPPFDEVALHERFSSEEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERI 512
Query: 270 GYVSTGLKEEEMRK-NIRKLQISDDASQVDKNCTICQXXXXXXXXIGRL-NCGHSYHYQC 327
G V+TGL + + + + ++ + C IC +G + CGH YH +C
Sbjct: 513 GSVNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRC 572
Query: 328 IQQWVEQKNFCPVCK 342
I++W+ KN CP+CK
Sbjct: 573 IKKWLSMKNSCPICK 587
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 241 LNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRK-------LQISDD 293
+N D H+D+RLD+++MSYE+LL LS++IG V TGL E++++ +++ L+
Sbjct: 361 VNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPS 420
Query: 294 ASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
+CTICQ I L+C H YH +C+++W+ KN CP+CK
Sbjct: 421 TDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICK 469
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 241 LNSQDRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRK-------LQISDD 293
+N D H+D+RLD+++MSYE+LL LS++IG V TGL E++++ +++ L+
Sbjct: 361 VNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPS 420
Query: 294 ASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCK 342
+CTICQ I L+C H YH +C+++W+ KN CP+CK
Sbjct: 421 TDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICK 469
>AT1G36950.1 | Symbols: | RING/U-box superfamily protein |
chr1:14009673-14010822 REVERSE LENGTH=226
Length = 226
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%)
Query: 245 DRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRKLQISDDASQVDKNCTIC 304
D +++LR+D D+M+YEQLL+L +GY ++ +K + + R + S+ S DK C IC
Sbjct: 24 DPYQELRMDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRNTKPSEFQSLADKICCIC 83
Query: 305 QXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKR 343
Q +G+LNCGH++H ++ W+ K CPVC++
Sbjct: 84 QDRFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPVCQK 122
>AT4G00070.1 | Symbols: | RING/U-box superfamily protein |
chr4:29672-31426 REVERSE LENGTH=179
Length = 179
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 245 DRHRDLRLDVDNMSYEQLLELSERIGYVSTGLKEEEMRKNIRKLQISDDASQVDKNCTIC 304
D +++LR+D D+M+YEQLL+L +GY ++G+K + + +R + S+ S DK C IC
Sbjct: 88 DPYQELRMDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRNTKPSEFQSLADKICCIC 147
Query: 305 QXXXXXXXXIGRLNCGHSYHYQCIQQWVEQK 335
Q +G+LNCGH++H C++ W+ K
Sbjct: 148 QDGFQKRAGVGKLNCGHNFHVNCVKPWILTK 178
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 255 DNMSYEQLLELSERIGYVSTGLKEEEMRKNIRKLQISDDASQVDKNCTICQXXXXXXXXI 314
D +YE+LL +++ G TGL EE + +N+ + + + K C ICQ +
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDENLIRRKYEKRSDDETKRCVICQQKLKDNEEV 240
Query: 315 GRLNCGHSYHYQCIQQWVEQKNFCPVCKRLVA 346
+L CGH +H+ CI+ W+ N CP+C R V
Sbjct: 241 SKLGCGHDFHFGCIKNWLMVTNKCPLCNREVV 272
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 251 RLDVDNMSYEQLLELSERIGYVSTGLKEEEMRK-NIRKLQISDDASQVDKNCTICQXXXX 309
+D D +SYE+LL L + +G S GL + + ++ + D+ + +++C IC+
Sbjct: 237 EMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYE 296
Query: 310 XXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLVA 346
+ L C HSYH +CI W++ CPVC V+
Sbjct: 297 DDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVS 333
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 253 DVDNMSYEQLLELSERIGYVSTGLKEEEMRK----------------NIRKLQISDDASQ 296
D +NM+YE+L EL + +G V GL +E + + +++K ++DD+
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQ- 233
Query: 297 VDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLV 345
C+IC I L C H YH CI QW++Q C +CK V
Sbjct: 234 ----CSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 252 LDVDNMSYEQLLELSERIGYVSTGLKEEEMRK-NIRKLQISDDASQ--VDKNCTICQXXX 308
+D D M+YE+L+EL E +G S GL +E + +K + S+ + C ICQ
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKY 204
Query: 309 XXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLV 345
L C H YH +CI +W+ CPVC V
Sbjct: 205 KIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 252 LDVDNMSYEQLLELSERIGYVSTGLKEEEMRK-NIRKLQISDDASQ--VDKNCTICQXXX 308
+D D M+YE+L+EL E +G S GL +E + +K + S+ + C ICQ
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKY 204
Query: 309 XXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLV 345
L C H YH +CI +W+ CPVC V
Sbjct: 205 KIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 255 DNMSYEQLLELSERIGYVSTGLKEEEMRK--NIRKLQISDDASQVDKNCTICQXXXXXXX 312
D +SYE+L+ L + IG + GL E+ N S + +++D+ C +CQ
Sbjct: 115 DQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSHNKNEIDR-CVVCQMEFEERE 173
Query: 313 XIGRLN-CGHSYHYQCIQQWVEQKNFCPVC 341
+ L C H YH +CI +W+E K CP+C
Sbjct: 174 SLVVLRPCDHPYHSECITKWLETKKICPIC 203
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 292 DDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLVA 346
++ S D C IC+ +L CGH +H C++ W+E++N CP C+ LV
Sbjct: 283 EELSSNDATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 334
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 27/177 (15%)
Query: 175 RKNV----SARGKIDVEKIAQRERSYSCRHSVVTFPDSADENVFTPPFEEPETYYVRDSE 230
RKN + R I ++ +RE + C + TF + ENV PF+ Y
Sbjct: 6 RKNTHWCHTCRRGIHLQGEGRREGA--CIYCGNTFLERLYENVELSPFDLFGLAYEEARN 63
Query: 231 IIMLQGSIVRLNSQDRHRDLRLDVDNMSYEQLLE----LSERIGYVSTGLKEEEMRKNIR 286
+ S++ + +S+E+L L +R G L +++
Sbjct: 64 RRNNRRSVIG--------------EQLSFEELFNRLPALQDRRGPPPASLA---AINSLQ 106
Query: 287 KLQISDDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKR 343
K++I +D C +CQ ++ C H YH +CI W+ Q+N CPVC++
Sbjct: 107 KIKIRQKHLGLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRK 163
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 292 DDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLVA 346
++ S D C IC+ +L CGH +H C++ W+E++N CP C+ LV
Sbjct: 212 EELSSNDATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 263
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 292 DDASQVDKNCTICQXXXXXXXXIGRLNCGHSYHYQCIQQWVEQKNFCPVCKRLVA 346
++ S D C IC+ +L CGH +H C++ W+E++N CP C+ LV
Sbjct: 104 EELSSNDATCIICREEMTSAK---KLVCGHLFHVHCLRSWLERQNTCPTCRALVV 155