Miyakogusa Predicted Gene
- Lj4g3v3113820.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3113820.3 tr|A0PEY0|A0PEY0_LOTJA Cytokinin receptor 1
OS=Lotus japonicus GN=hk1 PE=2 SV=1,99.57,0,His Kinase A
(phosphoacceptor) domain,Signal transduction histidine kinase,
subgroup 1, dimerisation,CUFF.52433.3
(703 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 916 0.0
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 916 0.0
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 916 0.0
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139... 685 0.0
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948... 656 0.0
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c... 165 1e-40
AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch... 141 1e-33
AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduc... 131 1e-30
AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 | ... 115 8e-26
AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kina... 114 3e-25
AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kina... 66 7e-11
AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kina... 66 7e-11
AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-1004... 65 2e-10
AT3G23150.1 | Symbols: ETR2 | Signal transduction histidine kina... 59 2e-08
AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 52 1e-06
AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 52 1e-06
>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/721 (65%), Positives = 542/721 (75%), Gaps = 40/721 (5%)
Query: 1 MYGSQYEEGDMSLVHESKLDFGDPYRKHHMICRYHQQAPTNWIAYTTAFLFFVILCLVGY 60
MYG+Q EE D SL HESKLDFGDP+RKH MICRYHQ+AP TT LFF I LVGY
Sbjct: 358 MYGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVGY 417
Query: 61 ILYAAGTHIVKVEDDYNAMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXR 120
ILY A HIVKVEDD++ MQ+LKV+AEAAD+AKSQFLATVSHEIRTPMN
Sbjct: 418 ILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLD 477
Query: 121 TELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFS 180
TELSSTQRDYAQTAQ CGKALIALINEVLDRAKIEAGKLELE+VPFD+RSILDDVLSLFS
Sbjct: 478 TELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFS 537
Query: 181 EKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQ 240
E+SR+K +ELAVFVSDKVP+IV GD GRFRQI+ NLVGNSVKFTE+GHIFVKVHLAE Q
Sbjct: 538 EESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAE--Q 595
Query: 241 CTMNGKCETFLNGGC-DDVLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFF--FD 297
+ + LNGG ++++ VS + TLSGYEAAD RNSWD+FKH +++E+ FD
Sbjct: 596 SKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFD 655
Query: 298 ASVKKLASSESYEQVTLMVSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSI 357
S V LMVS+EDTGIGI AQ +FMPF+QADSSTSRNYGGTGIGLSI
Sbjct: 656 IS----------SNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSI 705
Query: 358 SKCLVELMGGQINFISRPQVGSTFSFTADFGTFKKNSTTD-MKKLNFEDLPSSFRGLKAI 416
SKCLVELM GQINFISRP +GSTF FTA K S + MKK N E LPS+F+G+KAI
Sbjct: 706 SKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAI 765
Query: 417 VVDGKPVRAAVTRYHLKRLGIQAKVAISINKAVSLCG---KNGSLTSALFQPDIIFVEKD 473
VVD KPVRAAVTRYH+KRLGI V S+ AV +NGS Q D+I VEKD
Sbjct: 766 VVDAKPVRAAVTRYHMKRLGINVDVVTSLKTAVVAAAAFERNGSPLPTKPQLDMILVEKD 825
Query: 474 SWVSGEDGG----IFNA-------FKMPQMILLATNICNAEFDKAKAAGFSDTVIMKPLR 522
SW+S ED + N+ K P++ L ATNI N+EFD+AK+AGF+DTVIMKPLR
Sbjct: 826 SWISTEDNDSEIRLLNSRTNGNVHHKSPKLALFATNITNSEFDRAKSAGFADTVIMKPLR 885
Query: 523 ASMLAACLQQVFGTGKTRQFGKDMSNGSSVRSLLCGKKILVVDDNLVNRRVAAGALKNFG 582
ASM+ ACLQQV KTRQ + S+ ++++SLL GKKILVVDDN+VNRRVAAGALK FG
Sbjct: 886 ASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFG 945
Query: 583 ADVKCAASGKAALEMLQYPHDFDACFMDIQMPEMDGFEATRRIRMMEREASEQLXXXXXX 642
A+V CA SG+ AL +LQ PH FDACFMDIQMP+MDGFEATR+IRMME+E E+
Sbjct: 946 AEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKETKEK------- 998
Query: 643 XXXXXXXFHMPILAMTADVIHATYDKCLNCGMDGYVSKPFEEENLYQAVAKFFKSKPASD 702
+H+PILAMTADVIHATY++CL GMDGYVSKPFEEENLY++VAK FK P S
Sbjct: 999 ---TNLEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFKPNPISP 1055
Query: 703 S 703
S
Sbjct: 1056 S 1056
>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/721 (65%), Positives = 542/721 (75%), Gaps = 40/721 (5%)
Query: 1 MYGSQYEEGDMSLVHESKLDFGDPYRKHHMICRYHQQAPTNWIAYTTAFLFFVILCLVGY 60
MYG+Q EE D SL HESKLDFGDP+RKH MICRYHQ+AP TT LFF I LVGY
Sbjct: 358 MYGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVGY 417
Query: 61 ILYAAGTHIVKVEDDYNAMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXR 120
ILY A HIVKVEDD++ MQ+LKV+AEAAD+AKSQFLATVSHEIRTPMN
Sbjct: 418 ILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLD 477
Query: 121 TELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFS 180
TELSSTQRDYAQTAQ CGKALIALINEVLDRAKIEAGKLELE+VPFD+RSILDDVLSLFS
Sbjct: 478 TELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFS 537
Query: 181 EKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQ 240
E+SR+K +ELAVFVSDKVP+IV GD GRFRQI+ NLVGNSVKFTE+GHIFVKVHLAE Q
Sbjct: 538 EESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAE--Q 595
Query: 241 CTMNGKCETFLNGGC-DDVLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFF--FD 297
+ + LNGG ++++ VS + TLSGYEAAD RNSWD+FKH +++E+ FD
Sbjct: 596 SKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFD 655
Query: 298 ASVKKLASSESYEQVTLMVSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSI 357
S V LMVS+EDTGIGI AQ +FMPF+QADSSTSRNYGGTGIGLSI
Sbjct: 656 IS----------SNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSI 705
Query: 358 SKCLVELMGGQINFISRPQVGSTFSFTADFGTFKKNSTTD-MKKLNFEDLPSSFRGLKAI 416
SKCLVELM GQINFISRP +GSTF FTA K S + MKK N E LPS+F+G+KAI
Sbjct: 706 SKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAI 765
Query: 417 VVDGKPVRAAVTRYHLKRLGIQAKVAISINKAVSLCG---KNGSLTSALFQPDIIFVEKD 473
VVD KPVRAAVTRYH+KRLGI V S+ AV +NGS Q D+I VEKD
Sbjct: 766 VVDAKPVRAAVTRYHMKRLGINVDVVTSLKTAVVAAAAFERNGSPLPTKPQLDMILVEKD 825
Query: 474 SWVSGEDGG----IFNA-------FKMPQMILLATNICNAEFDKAKAAGFSDTVIMKPLR 522
SW+S ED + N+ K P++ L ATNI N+EFD+AK+AGF+DTVIMKPLR
Sbjct: 826 SWISTEDNDSEIRLLNSRTNGNVHHKSPKLALFATNITNSEFDRAKSAGFADTVIMKPLR 885
Query: 523 ASMLAACLQQVFGTGKTRQFGKDMSNGSSVRSLLCGKKILVVDDNLVNRRVAAGALKNFG 582
ASM+ ACLQQV KTRQ + S+ ++++SLL GKKILVVDDN+VNRRVAAGALK FG
Sbjct: 886 ASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFG 945
Query: 583 ADVKCAASGKAALEMLQYPHDFDACFMDIQMPEMDGFEATRRIRMMEREASEQLXXXXXX 642
A+V CA SG+ AL +LQ PH FDACFMDIQMP+MDGFEATR+IRMME+E E+
Sbjct: 946 AEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKETKEK------- 998
Query: 643 XXXXXXXFHMPILAMTADVIHATYDKCLNCGMDGYVSKPFEEENLYQAVAKFFKSKPASD 702
+H+PILAMTADVIHATY++CL GMDGYVSKPFEEENLY++VAK FK P S
Sbjct: 999 ---TNLEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFKPNPISP 1055
Query: 703 S 703
S
Sbjct: 1056 S 1056
>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-368016
REVERSE LENGTH=1080
Length = 1080
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/721 (65%), Positives = 542/721 (75%), Gaps = 40/721 (5%)
Query: 1 MYGSQYEEGDMSLVHESKLDFGDPYRKHHMICRYHQQAPTNWIAYTTAFLFFVILCLVGY 60
MYG+Q EE D SL HESKLDFGDP+RKH MICRYHQ+AP TT LFF I LVGY
Sbjct: 381 MYGNQDEEADRSLSHESKLDFGDPFRKHKMICRYHQKAPIPLNVLTTVPLFFAIGFLVGY 440
Query: 61 ILYAAGTHIVKVEDDYNAMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXR 120
ILY A HIVKVEDD++ MQ+LKV+AEAAD+AKSQFLATVSHEIRTPMN
Sbjct: 441 ILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLD 500
Query: 121 TELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFS 180
TELSSTQRDYAQTAQ CGKALIALINEVLDRAKIEAGKLELE+VPFD+RSILDDVLSLFS
Sbjct: 501 TELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFS 560
Query: 181 EKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQ 240
E+SR+K +ELAVFVSDKVP+IV GD GRFRQI+ NLVGNSVKFTE+GHIFVKVHLAE Q
Sbjct: 561 EESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAE--Q 618
Query: 241 CTMNGKCETFLNGGC-DDVLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFF--FD 297
+ + LNGG ++++ VS + TLSGYEAAD RNSWD+FKH +++E+ FD
Sbjct: 619 SKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAADGRNSWDSFKHLVSEEQSLSEFD 678
Query: 298 ASVKKLASSESYEQVTLMVSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSI 357
S V LMVS+EDTGIGI AQ +FMPF+QADSSTSRNYGGTGIGLSI
Sbjct: 679 IS----------SNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGLSI 728
Query: 358 SKCLVELMGGQINFISRPQVGSTFSFTADFGTFKKNSTTD-MKKLNFEDLPSSFRGLKAI 416
SKCLVELM GQINFISRP +GSTF FTA K S + MKK N E LPS+F+G+KAI
Sbjct: 729 SKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMKAI 788
Query: 417 VVDGKPVRAAVTRYHLKRLGIQAKVAISINKAVSLCG---KNGSLTSALFQPDIIFVEKD 473
VVD KPVRAAVTRYH+KRLGI V S+ AV +NGS Q D+I VEKD
Sbjct: 789 VVDAKPVRAAVTRYHMKRLGINVDVVTSLKTAVVAAAAFERNGSPLPTKPQLDMILVEKD 848
Query: 474 SWVSGEDGG----IFNA-------FKMPQMILLATNICNAEFDKAKAAGFSDTVIMKPLR 522
SW+S ED + N+ K P++ L ATNI N+EFD+AK+AGF+DTVIMKPLR
Sbjct: 849 SWISTEDNDSEIRLLNSRTNGNVHHKSPKLALFATNITNSEFDRAKSAGFADTVIMKPLR 908
Query: 523 ASMLAACLQQVFGTGKTRQFGKDMSNGSSVRSLLCGKKILVVDDNLVNRRVAAGALKNFG 582
ASM+ ACLQQV KTRQ + S+ ++++SLL GKKILVVDDN+VNRRVAAGALK FG
Sbjct: 909 ASMIGACLQQVLELRKTRQQHPEGSSPATLKSLLTGKKILVVDDNIVNRRVAAGALKKFG 968
Query: 583 ADVKCAASGKAALEMLQYPHDFDACFMDIQMPEMDGFEATRRIRMMEREASEQLXXXXXX 642
A+V CA SG+ AL +LQ PH FDACFMDIQMP+MDGFEATR+IRMME+E E+
Sbjct: 969 AEVVCAESGQVALGLLQIPHTFDACFMDIQMPQMDGFEATRQIRMMEKETKEK------- 1021
Query: 643 XXXXXXXFHMPILAMTADVIHATYDKCLNCGMDGYVSKPFEEENLYQAVAKFFKSKPASD 702
+H+PILAMTADVIHATY++CL GMDGYVSKPFEEENLY++VAK FK P S
Sbjct: 1022 ---TNLEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENLYKSVAKSFKPNPISP 1078
Query: 703 S 703
S
Sbjct: 1079 S 1079
>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
chr5:13911743-13916337 REVERSE LENGTH=1176
Length = 1176
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/708 (52%), Positives = 466/708 (65%), Gaps = 43/708 (6%)
Query: 1 MYGSQYEEGDMSLVHESKLDFGDPYRKHHMICRYHQQAPTNWIAYTTAFLFFVILCLVGY 60
MYGS E GD+S H S LDFGDP R H M CR+ + P W A T + L VI LVGY
Sbjct: 498 MYGS--EIGDISEQHISSLDFGDPSRNHEMHCRFKHKLPIPWTAITPSILVLVITFLVGY 555
Query: 61 ILYAAGTHIVKVEDDYNAMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXR 120
ILY A I VE+D M++LK +AEAADIAKSQFLATVSHEIRTPMN
Sbjct: 556 ILYEAINRIATVEEDCQKMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKMLMD 615
Query: 121 TELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFS 180
T+L + Q DYAQTA GK L +LINEVLD+AKIE+G+LELE VPFD+R ILD+V SL S
Sbjct: 616 TDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLS 675
Query: 181 EKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFT-ERGHIFVKVHLAEKR 239
K+ KG+ELAV+VS +VPD+V+GDP RFRQI+TNLVGNS+KFT ERGHIF+ VHLA++
Sbjct: 676 GKANEKGIELAVYVSSQVPDVVVGDPSRFRQIITNLVGNSIKFTQERGHIFISVHLADEV 735
Query: 240 QCTMNGKCETFLNGGCDDVLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFFFDAS 299
+ + T + L + S + +T+SG+ A + SW NFK + E
Sbjct: 736 KEPL-----TIEDAVLKQRLALGCSESGETVSGFPAVNAWGSWKNFKTCYSTE------- 783
Query: 300 VKKLASSESYEQVTLMVSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSISK 359
S++ +Q+ L+V+VEDTG+GI AQ IF PF+QADSSTSR YGGTGIGLSISK
Sbjct: 784 ------SQNSDQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGIGLSISK 837
Query: 360 CLVELMGGQINFISRPQVGSTFSFTADFGTFKKNSTTDMKKLNFEDLP-SSFRGLKAIVV 418
LVELM G++ F+S P +GSTFSFT FG K + T + KL DL F GL+A+V+
Sbjct: 838 RLVELMQGEMGFVSEPGIGSTFSFTGVFG--KAETNTSITKLERFDLAIQEFTGLRALVI 895
Query: 419 DGKPVRAAVTRYHLKRLGIQAKVAISINKAVSLCGKNGSLTSALFQPDIIFVEKDSWVSG 478
D + +RA VTRY L+RLGI A + S+ A + C S L +I ++KD+W
Sbjct: 896 DNRNIRAEVTRYELRRLGISADIVSSLRMACTCC------ISKLENLAMILIDKDAWNKE 949
Query: 479 EDGGIFNAF--------KMPQMILLATNICNAEFDKAKAAGFSDTVIMKPLRASMLAACL 530
E + F ++P++ LLAT+ E + K+ G D V++KPLR S+L CL
Sbjct: 950 EFSVLDELFTRSKVTFTRVPKIFLLATSATLTERSEMKSTGLIDEVVIKPLRMSVLICCL 1009
Query: 531 QQVFGTGKTRQFGKDMSNGSSVRSLLCGKKILVVDDNLVNRRVAAGALKNFGADVKCAAS 590
Q+ GK RQ + N + LL K+ILVVDDNLVNRRVA GALK +GA V C S
Sbjct: 1010 QETLVNGKKRQPNRQRRN---LGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVES 1066
Query: 591 GKAALEMLQYPHDFDACFMDIQMPEMDGFEATRRIRMMEREASEQLXXXXXXXXX--XXX 648
GKAAL ML+ PH+FDACFMD+QMPEMDGFEATRR+R +ERE ++++
Sbjct: 1067 GKAALAMLKPPHNFDACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCKFS 1126
Query: 649 XFHMPILAMTADVIHATYDKCLNCGMDGYVSKPFEEENLYQAVAKFFK 696
+H+PILAMTADVI AT+++C+ CGMDGYVSKPFEEE LY AVA+FF+
Sbjct: 1127 SWHVPILAMTADVIQATHEECMKCGMDGYVSKPFEEEVLYTAVARFFE 1174
>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
chr1:9487780-9492027 FORWARD LENGTH=1036
Length = 1036
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/711 (50%), Positives = 463/711 (65%), Gaps = 43/711 (6%)
Query: 1 MYGSQYEEGDMSLVHESKLDFGDPYRKHHMICRYHQQAPTNWIAYTTAFLFFVILCLVGY 60
MYG+ + V S L FGDP RKH M CR+ Q+ P ++ T+F VI LV +
Sbjct: 361 MYGTNVSADGLERV--SPLIFGDPLRKHEMRCRFKQKPPWPVLSMVTSFGILVIALLVAH 418
Query: 61 ILYAAGTHIVKVEDDYNAMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXR 120
I++A + I KVE+D + M+ LK KAEAAD+AKSQFLATVSHEIRTPMN
Sbjct: 419 IIHATVSRIHKVEEDCDKMKQLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMD 478
Query: 121 TELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFS 180
TEL TQ+DY +TAQA GKAL++LINEVLD+AKIE+GKLELE V FDLR ILDDVLSLFS
Sbjct: 479 TELDVTQQDYVRTAQASGKALVSLINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFS 538
Query: 181 EKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQ 240
KS+ KG+ELAV++SD+VPD+++GDPGRFRQI+TNL+GNS+KFTE+GHIFV VHL ++
Sbjct: 539 SKSQQKGVELAVYISDRVPDMLIGDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVDELF 598
Query: 241 CTMNGKCETFLNGGCDDVLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFFFDASV 300
+++G+ + S TLSG AD + SW+NFK ++ F+ S
Sbjct: 599 ESIDGE---------------TASSPESTLSGLPVADRQRSWENFKAFSSNGHRSFEPSP 643
Query: 301 KKLASSESYEQVTLMVSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSISKC 360
+ L+VSVEDTG+GI AQ IF PF+Q S SR +GGTGIGLSISKC
Sbjct: 644 P---------DINLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSISKC 694
Query: 361 LVELMGGQINFISRPQVGSTFSFTADFGTFKKNSTTDMKKLNFEDLPSSFRGLKAIVVDG 420
LV LM G+I F S P+VGSTF+FTA F + + + K N + + S FRG+KA+VVD
Sbjct: 695 LVGLMKGEIGFSSTPKVGSTFTFTAVFSNGMQPA--ERKNDNNQPIFSEFRGMKAVVVDH 752
Query: 421 KPVRAAVTRYHLKRLGIQAKVAISINKAVSLCGKNGSLTSALFQPDIIFVEKDSWVSGED 480
+P RA V+ YH +RLGI+ +V + +A+ K G+ T ++I +E++ W D
Sbjct: 753 RPARAKVSWYHFQRLGIRVEVVPRVEQALHYL-KIGTTTV-----NMILIEQEIWNREAD 806
Query: 481 GGIFN-----AFKMPQMILLATNICNAEFDKAKAAGF-SDTVIMKPLRASMLAACLQQVF 534
I F P++ILLA N + +A G VI+KPLRASMLAA LQ+
Sbjct: 807 DFIKKLQKDPLFLSPKLILLA-NSVESSISEALCTGIDPPIVIVKPLRASMLAATLQRGL 865
Query: 535 GTGKTRQFGKDMSNGSSVRSLLCGKKILVVDDNLVNRRVAAGALKNFGADVKCAASGKAA 594
G G +R+LL G+KIL+VDDN VN RVAAGALK +GADV CA SG A
Sbjct: 866 GIGIREPPQHKGPPALILRNLLLGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIKA 925
Query: 595 LEMLQYPHDFDACFMDIQMPEMDGFEATRRIRMMEREASEQLX--XXXXXXXXXXXXFHM 652
+ +L+ PH+FDACFMDIQMPEMDGFEATRRIR ME E ++++ +H+
Sbjct: 926 ISLLKPPHEFDACFMDIQMPEMDGFEATRRIRDMEEEMNKRIKNGEALIVENGNKTSWHL 985
Query: 653 PILAMTADVIHATYDKCLNCGMDGYVSKPFEEENLYQAVAKFFKSKPASDS 703
P+LAMTADVI AT+++CL CGMDGYVSKPFE E LY+ V++FF S ++S
Sbjct: 986 PVLAMTADVIQATHEECLKCGMDGYVSKPFEAEQLYREVSRFFNSPSDTES 1036
>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
chr2:7743133-7748013 REVERSE LENGTH=1207
Length = 1207
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 162/338 (47%), Gaps = 34/338 (10%)
Query: 43 IAYTTAFLFFVILCLVGYILYAAGTHIVKVEDDYNAMQDLKVKAEAADIAKSQFLATVSH 102
I + + F I C+ IL + +K+ + D + +AEA+ KSQFLA +SH
Sbjct: 449 ILISASVCIFFIGCVCILILTNGVSKEMKLRAELIRQLDARRRAEASSNYKSQFLANMSH 508
Query: 103 EIRTPMNXXXXXXXXXXRTE-LSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLEL 161
E+RTPM + LS+ Q + C AL+ L+N +LD +K+E+GKL L
Sbjct: 509 ELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVL 568
Query: 162 EAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSV 221
E FDL L+ ++ +FS + + +E + +SD +P +V GD R QI NL+ NS+
Sbjct: 569 EEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARLVQIFANLISNSI 628
Query: 222 KFTERGHIFVKVHLAEKRQCTMNGKCETFLNGGCDDVLHVSGSYNLKTLSGYEAADERNS 281
KFT GHI ++ G CE D + VS D R
Sbjct: 629 KFTTTGHIILR------------GWCENI--NSLHDEMSVS-------------VDRRKP 661
Query: 282 WDNFKHHIADEEFFFDASVKKLASSESYEQVTLMVSVEDTGIGISFSAQDSIFMPFVQAD 341
W K S K + ++ L V+DTG GI S DS+F F QAD
Sbjct: 662 WAPMKTKQVQHRNHLQKSCK------NANKMVLWFEVDDTGCGIDPSKWDSVFESFEQAD 715
Query: 342 SSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGS 379
ST+R +GGTG+GL I + LV MGG+I + + +G+
Sbjct: 716 PSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGLGT 753
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 50/178 (28%)
Query: 556 LCGKKILVVDDNLVNRRVAAGALKNFGADVKCAASGKAALEMLQY-------PHD----- 603
L G +IL+ +D V +RVA L+ GA V G+ A++ L Y P +
Sbjct: 1041 LEGIRILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQAVDSLNYKSINAQAPTEEHKSF 1100
Query: 604 --------------------FDACFMDIQMPEMDGFEATRRIRMMEREASEQLXXXXXXX 643
+D MD QMP+MDG+EAT+ IR E
Sbjct: 1101 EEETANKVTTRETSLRNSSPYDLILMDCQMPKMDGYEATKAIRRAE-------------- 1146
Query: 644 XXXXXXFHMPILAMTADVIHATYDKCLNCGMDGYVSKPFEEENLYQAVAKFFKSKPAS 701
H+PI+A+TA + + KCL GMD Y++KP + + + + +KP++
Sbjct: 1147 --IGTELHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRKLMVSTILSL--TKPSA 1200
>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
chr5:3386835-3390541 FORWARD LENGTH=922
Length = 922
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 143/307 (46%), Gaps = 57/307 (18%)
Query: 95 QFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQACGKALIALINEVLDRAKI 154
Q LAT+SHEIR+P++ T+L QR + G ++ LIN++LD +K+
Sbjct: 369 QMLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKV 428
Query: 155 EAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVT 214
E+G + LEA F R ++ VL + S K L L ++D VP V+GD R RQI+T
Sbjct: 429 ESGVMRLEATKFRPREVVKHVLQTAA-ASLKKSLTLEGNIADDVPIEVVGDVLRIRQILT 487
Query: 215 NLVGNSVKFTERGHIFVKVHLAEK----RQCTMNGKCETFLNGGCDDVLHVSGSYNLKTL 270
NL+ N++KFT G++ +K+ + + R +N E G L
Sbjct: 488 NLISNAIKFTHEGNVGIKLQVISEPSFVRDNALNADTEEHEQNG------------LTET 535
Query: 271 SGYEAADERNSWDNFKHHIADEEFFFDASVKKLASSESYEQVTLMVSVEDTGIGISFSAQ 330
S + D WD TGIGI +A
Sbjct: 536 SVWICCD---VWD-------------------------------------TGIGIPENAL 555
Query: 331 DSIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTADFGTF 390
+F ++QA + +R YGGTG+GL+I K LVELMGGQ+ SR GSTF+F +
Sbjct: 556 PCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSRVSEGSTFTFILPYKVG 615
Query: 391 KKNSTTD 397
+ + +D
Sbjct: 616 RSDDYSD 622
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 560 KILVVDDNLVNRRVAAGALKNFGADVKCAASGKAALEMLQYPHDFDACFMDIQMPEMDGF 619
KIL+V+DN +N VA +K G + A +G A+ + +D MD+ MP +DG
Sbjct: 779 KILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAIN-SSSYDLVLMDVCMPVLDGL 837
Query: 620 EATRRIRMMER--------EASEQLXXXXXXXXXXXXXFHMPILAMTADVIHATYDKCLN 671
+ATR IR E EA + +PI+AMTA+ + + ++C
Sbjct: 838 KATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPTNRLPIIAMTANTLAESSEECYA 897
Query: 672 CGMDGYVSKPFEEENLYQAVAKFF 695
GMD ++SKP + L + + ++
Sbjct: 898 NGMDSFISKPVTLQKLRECLQQYL 921
>AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal
transduction histidine kinase, hybrid-type, ethylene
sensor | chr1:24734698-24737366 FORWARD LENGTH=738
Length = 738
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 168/371 (45%), Gaps = 65/371 (17%)
Query: 75 DYNAMQDL-KVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQT 133
+ N DL + +AE A A++ FLA ++HE+RTPM+ TEL+ QR +T
Sbjct: 325 EQNVALDLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVET 384
Query: 134 AQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVF 193
L L+N+VLD +++E G L+LE F+L ++ +VL+L + K L + +
Sbjct: 385 ILKSSNLLATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLN 444
Query: 194 VSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQCTMNGKCETFLNG 253
++ +P+ V+GD R QI+ N+VGN+VKF+++G I V
Sbjct: 445 LAPDLPEFVVGDEKRLMQIILNIVGNAVKFSKQGSISVTA-------------------- 484
Query: 254 GCDDVLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFFFDASVKKLASSESYEQVT 313
L T S AAD FF + S Y +V
Sbjct: 485 -------------LVTKSDTRAAD----------------FFVVPT-----GSHFYLRV- 509
Query: 314 LMVSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFIS 373
V+D+G GI+ IF F Q S +R+ GG+G+GL+ISK V LM G I +I
Sbjct: 510 ---KVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNI-WIE 565
Query: 374 RPQVGSTFSFTADFGTFKKNSTTDMKKLNFEDLP-----SSFRGLKAIVVDGKPVRAAVT 428
+G + D + + K+ +P S+F GLK +V+D V VT
Sbjct: 566 SDGLGKGCTAIFDVKLGISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVT 625
Query: 429 RYHLKRLGIQA 439
+ L LG +
Sbjct: 626 KGLLVHLGCEV 636
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 558 GKKILVVDDNLVNRRVAAGALKNFGADVKCAASGKAALEMLQYPHDFDACFMDIQMPEMD 617
G K+LV+D+N V+R V G L + G +V +S + L ++ H+ FMD+ MP ++
Sbjct: 609 GLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVS--HEHKVVFMDVCMPGVE 666
Query: 618 GFEATRRIRMMEREASEQLXXXXXXXXXXXXXFHMPIL-AMTADVIHATYDKCLNCGMDG 676
++ RI + Q P+L A++ + +T +KC++ G+DG
Sbjct: 667 NYQIALRIHEKFTKQRHQ----------------RPLLVALSGNTDKSTKEKCMSFGLDG 710
Query: 677 YVSKPFEEENLYQAVAKFFKSK 698
+ KP +N+ ++ + +
Sbjct: 711 VLLKPVSLDNIRDVLSDLLEPR 732
>AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 |
chr2:17084635-17086819 REVERSE LENGTH=613
Length = 613
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 55/320 (17%)
Query: 78 AMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQAC 137
A+ + +AE A A++ FLA ++HE+RTPM+ TELS QR +T
Sbjct: 329 ALDKARQEAEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKS 388
Query: 138 GKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDK 197
+ LI++VLD +++E G L LE PF L++I ++V+SL + K L + +S
Sbjct: 389 SNLVATLISDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSAD 448
Query: 198 VPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQCTMNGKCETFLNGGCDD 257
+P +GD R Q + N++GN+VKFT+ G+I +
Sbjct: 449 LPTYAIGDEKRLMQTILNIMGNAVKFTKEGYISI-------------------------- 482
Query: 258 VLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFFFDASVKKLASSESYEQVTLMVS 317
+ ++ E+ E + EFF L+ S Y L V
Sbjct: 483 ---------IASIMKPESLQE----------LPSPEFF-----PVLSDSHFY----LCVQ 514
Query: 318 VEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRP-Q 376
V+DTG GI +F FVQ + T RN+ G G+GL++ K V LMGG + S +
Sbjct: 515 VKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLMGGYMWIESEGLE 574
Query: 377 VGSTFSFTADFGTFKKNSTT 396
G T SF G S++
Sbjct: 575 KGCTASFIIRLGICNGPSSS 594
>AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kinase
| chr2:19459167-19463122 REVERSE LENGTH=1122
Length = 1122
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 146/322 (45%), Gaps = 35/322 (10%)
Query: 85 KAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYA-QTAQACGKALIA 143
+AE + KSQ A SH+IR + + D C K L+A
Sbjct: 388 QAERKSMNKSQAFANASHDIRGALAGMKGLIDICRDGVKPGSDVDTTLNQVNVCAKDLVA 447
Query: 144 LINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSD----KVP 199
L+N VLD +KIE+GK++L F+L +L+DV+ + + KG+++ + D K
Sbjct: 448 LLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKKGVDVVLDPHDGSVFKFS 507
Query: 200 DIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQCTMNGKCETFLNGGCDDVL 259
+ V GD GR +QI+ NLV N+VKFT GHI V+ +R + + G +
Sbjct: 508 N-VRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAW--AQRPGSNSSVVLASYPKGVSKFV 564
Query: 260 HVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEFFFDASVKKLASSESYEQVTLMVSVE 319
N + S YE ++ +++ EF F+ V+
Sbjct: 565 KSMFCKNKEESSTYETEIS----NSIRNNANTMEFVFE--------------------VD 600
Query: 320 DTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRP--QV 377
DTG GI + S+F +VQ T++ + GTG+GL I + LV LMGG+I + +
Sbjct: 601 DTGKGIPMEMRKSVFENYVQV-RETAQGHQGTGLGLGIVQSLVRLMGGEIRITDKAMGEK 659
Query: 378 GSTFSFTADFGTFKKNSTTDMK 399
G+ F F T + +DMK
Sbjct: 660 GTCFQFNVLLTTLESPPVSDMK 681
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 34/146 (23%)
Query: 555 LLCGKKILVVDDNLVNRRVAAGALKNFG-ADVKCAASGKAALEML--------------Q 599
L GK++LVVDDN ++R+VA G LK G ++V+ SGK AL ++ +
Sbjct: 982 FLRGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDK 1041
Query: 600 YPHDFDACFMDIQMPEMDGFEATRRIRMMEREASEQLXXXXXXXXXXXXXFHMPILAMTA 659
P FD FMD QMPEMDG+EATR IR +E+ PI+A++
Sbjct: 1042 LP--FDYIFMDCQMPEMDGYEATREIRKVEKSYG----------------VRTPIIAVSG 1083
Query: 660 -DVIHATYDKCLNCGMDGYVSKPFEE 684
D + + GMD ++ K +
Sbjct: 1084 HDPGSEEARETIQAGMDAFLDKSLNQ 1109
>AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 554 SLLCGKKILVVDDNLVNRRVAAGALKNFGADVKCAASGKAALEML-QYPHDFDACFMDIQ 612
S+L G +I + DD+ VNR V L+ G +V +SG L L + +D+Q
Sbjct: 637 SILRGLRITLADDDDVNRTVTKRLLEKLGCEVTAVSSGFECLNALSNVEMSYRVVILDLQ 696
Query: 613 MPEMDGFEATRRIRMMEREASEQLXXXXXXXXXXXXXFHMP-ILAMTADVIHATYDKCLN 671
MPEMDGFE +IR H P I+A+TA ++CL
Sbjct: 697 MPEMDGFEVAMKIR-------------------KFCGHHWPLIIALTASTEDHVRERCLQ 737
Query: 672 CGMDGYVSKP 681
GM+G + KP
Sbjct: 738 MGMNGMIQKP 747
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 140/374 (37%), Gaps = 70/374 (18%)
Query: 78 AMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQAC 137
A+ K A A A++ +SH +R PM+ +S Q+
Sbjct: 353 ALLRAKQNAMMASQARNTCQKVMSHGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKT 412
Query: 138 GKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDK 197
L ALIN+V+D + + GK LE F L S++ + + S +KG + V +
Sbjct: 413 STVLSALINDVIDISPKDNGKSALEVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTR 472
Query: 198 VPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQCTMNGKCETFLNGGCDD 257
+P++V+GD R Q+V ++G + T+ G + T CE G D
Sbjct: 473 LPNLVVGDEKRTFQLVMYMLGYILDMTDGG-----------KTVTFRVICEG--TGTSQD 519
Query: 258 VLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEF--FFDASVKKLASSESYEQVTLM 315
++ E W K H++D+ F+ + ++ +
Sbjct: 520 ----------------KSKRETGMW---KSHMSDDSLGVKFEVEINEIQNPP-------- 552
Query: 316 VSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGI--GLSISKC--LVELMGGQINF 371
+ SA +P +R Y GI GLS+ C L ++M G I +
Sbjct: 553 ---------LDGSAMAMRHIP--------NRRYHSNGIKEGLSLGMCRKLAQMMQGNI-W 594
Query: 372 ISRPQVGSTFS------FTADFGTFKKNSTTDMKKLNFEDLPSSFRGLKAIVVDGKPVRA 425
IS G T S F + + +L + S RGL+ + D V
Sbjct: 595 ISPKSHGQTQSMQLVLRFQTRPSIRRSILAGNAPELQHPNSNSILRGLRITLADDDDVNR 654
Query: 426 AVTRYHLKRLGIQA 439
VT+ L++LG +
Sbjct: 655 TVTKRLLEKLGCEV 668
>AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 554 SLLCGKKILVVDDNLVNRRVAAGALKNFGADVKCAASGKAALEML-QYPHDFDACFMDIQ 612
S+L G +I + DD+ VNR V L+ G +V +SG L L + +D+Q
Sbjct: 637 SILRGLRITLADDDDVNRTVTKRLLEKLGCEVTAVSSGFECLNALSNVEMSYRVVILDLQ 696
Query: 613 MPEMDGFEATRRIRMMEREASEQLXXXXXXXXXXXXXFHMP-ILAMTADVIHATYDKCLN 671
MPEMDGFE +IR H P I+A+TA ++CL
Sbjct: 697 MPEMDGFEVAMKIR-------------------KFCGHHWPLIIALTASTEDHVRERCLQ 737
Query: 672 CGMDGYVSKP 681
GM+G + KP
Sbjct: 738 MGMNGMIQKP 747
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 140/374 (37%), Gaps = 70/374 (18%)
Query: 78 AMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQAC 137
A+ K A A A++ +SH +R PM+ +S Q+
Sbjct: 353 ALLRAKQNAMMASQARNTCQKVMSHGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKT 412
Query: 138 GKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDK 197
L ALIN+V+D + + GK LE F L S++ + + S +KG + V +
Sbjct: 413 STVLSALINDVIDISPKDNGKSALEVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTR 472
Query: 198 VPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLAEKRQCTMNGKCETFLNGGCDD 257
+P++V+GD R Q+V ++G + T+ G + T CE G D
Sbjct: 473 LPNLVVGDEKRTFQLVMYMLGYILDMTDGG-----------KTVTFRVICEG--TGTSQD 519
Query: 258 VLHVSGSYNLKTLSGYEAADERNSWDNFKHHIADEEF--FFDASVKKLASSESYEQVTLM 315
++ E W K H++D+ F+ + ++ +
Sbjct: 520 ----------------KSKRETGMW---KSHMSDDSLGVKFEVEINEIQNPP-------- 552
Query: 316 VSVEDTGIGISFSAQDSIFMPFVQADSSTSRNYGGTGI--GLSISKC--LVELMGGQINF 371
+ SA +P +R Y GI GLS+ C L ++M G I +
Sbjct: 553 ---------LDGSAMAMRHIP--------NRRYHSNGIKEGLSLGMCRKLAQMMQGNI-W 594
Query: 372 ISRPQVGSTFS------FTADFGTFKKNSTTDMKKLNFEDLPSSFRGLKAIVVDGKPVRA 425
IS G T S F + + +L + S RGL+ + D V
Sbjct: 595 ISPKSHGQTQSMQLVLRFQTRPSIRRSILAGNAPELQHPNSNSILRGLRITLADDDDVNR 654
Query: 426 AVTRYHLKRLGIQA 439
VT+ L++LG +
Sbjct: 655 TVTKRLLEKLGCEV 668
>AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-10045948
REVERSE LENGTH=1112
Length = 1112
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 97 LATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEA 156
L V EI+ P+N +E+S++QR + +T+ AC K + +I E D IE
Sbjct: 875 LTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTII-ESTDLKSIEE 933
Query: 157 GKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVM-GDPGRFRQIVTN 215
GKL+LE F L +ILD ++S R + +L V V++++ + + GD + + I+ +
Sbjct: 934 GKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILAD 993
Query: 216 LVGNSVKFTERGHIFVKVHLAEKRQCTM-NGK 246
L+ N V + +V + ++ ++ + NG+
Sbjct: 994 LLRNIVNHAPFPNSWVGISISPGQELSRDNGR 1025
>AT3G23150.1 | Symbols: ETR2 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:8255156-8257560
FORWARD LENGTH=773
Length = 773
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 554 SLLCGKKILVVDDNLVNRRVAAGALKNFGADVKCAASGKAALEML-----QYPHDFDACF 608
SLL G ++L+VD N NR V L+ G DV +SG L + F
Sbjct: 641 SLLRGLQVLLVDTNDSNRAVTRKLLEKLGCDVTAVSSGFDCLTAIAPGSSSPSTSFQVVV 700
Query: 609 MDIQMPEMDGFEATRRIRMMEREASEQLXXXXXXXXXXXXXFHMPILAMTADVIHATYDK 668
+D+QM EMDG+E RI R S L I+A T + +DK
Sbjct: 701 LDLQMAEMDGYEVAMRI----RSRSWPL-----------------IVATTVSLDEEMWDK 739
Query: 669 CLNCGMDGYVSKP 681
C G++G V KP
Sbjct: 740 CAQIGINGVVRKP 752
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 71 KVEDDYNAMQDLKVKAEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDY 130
K+ + A+Q K A A A++ F T+S +R PM+ +LS Q+
Sbjct: 346 KLAEQNRALQMAKRDALRASQARNAFQKTMSEGMRRPMHSILGLLSMIQDEKLSDEQKMI 405
Query: 131 AQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLEL 190
T G + L+ + +D + G+ E PF L + + + G+
Sbjct: 406 VDTMVKTGNVMSNLVGDSMD---VPDGRFGTEMKPFSLHRTIHEAACMARCLCLCNGIRF 462
Query: 191 AVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTER 226
V +PD V+GD R Q++ ++VG+ VK +R
Sbjct: 463 LVDAEKSLPDNVVGDERRVFQVILHIVGSLVKPRKR 498
>AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3098892 REVERSE LENGTH=1014
Length = 1014
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 86 AEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQACGKALIALI 145
AE + + + LA + +IR P++ TEL QR QT+ C K L
Sbjct: 781 AERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQL---- 836
Query: 146 NEVLDRAKIEA---GKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKV-PDI 201
+++LD + +E+ G L+LE F L +L S KS K + + ++V D
Sbjct: 837 SKILDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDT 896
Query: 202 VMGDPGRFRQIVTNLVGNSVKFTERG 227
+ GD R +Q++ + + +V FT G
Sbjct: 897 LYGDSIRLQQVLADFMLMAVNFTPSG 922
>AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3099216 REVERSE LENGTH=1122
Length = 1122
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 86 AEAADIAKSQFLATVSHEIRTPMNXXXXXXXXXXRTELSSTQRDYAQTAQACGKALIALI 145
AE + + + LA + +IR P++ TEL QR QT+ C K L
Sbjct: 889 AERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQL---- 944
Query: 146 NEVLDRAKIEA---GKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKV-PDI 201
+++LD + +E+ G L+LE F L +L S KS K + + ++V D
Sbjct: 945 SKILDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDT 1004
Query: 202 VMGDPGRFRQIVTNLVGNSVKFTERG 227
+ GD R +Q++ + + +V FT G
Sbjct: 1005 LYGDSIRLQQVLADFMLMAVNFTPSG 1030