Miyakogusa Predicted Gene

Lj4g3v3113810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113810.1 Non Chatacterized Hit- tr|I1KQE8|I1KQE8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8146
PE=,93.44,0,PC_rep,Proteasome/cyclosome, regulatory subunit;
HEAT_2,NULL; seg,NULL; no description,Armadillo-lik,CUFF.52592.1
         (1004 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32730.1 | Symbols:  | 26S proteasome regulatory complex, non...  1544   0.0  
AT1G04810.1 | Symbols:  | 26S proteasome regulatory complex, non...  1518   0.0  

>AT2G32730.1 | Symbols:  | 26S proteasome regulatory complex,
            non-ATPase subcomplex, Rpn2/Psmd1 subunit |
            chr2:13880189-13885464 FORWARD LENGTH=1004
          Length = 1004

 Score = 1544 bits (3998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 780/1008 (77%), Positives = 819/1008 (81%), Gaps = 8/1008 (0%)

Query: 1    MATTLVSSAGGMLAMLNESHLSLKLHALSNLNNLVDTFWPEISTSVPLIESLYEDEEFDQ 60
            MAT +VSSAGG+LAMLNE H  LKLHALSNLNNLVD FWPEISTSVP+IESLYEDEEFD 
Sbjct: 1    MATPMVSSAGGLLAMLNEPHPVLKLHALSNLNNLVDQFWPEISTSVPIIESLYEDEEFDL 60

Query: 61   HQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDVSEDSDYVHTLLVKAIDEYASLKSK 120
            HQRQLAAL+VSKVFYYLGEL+DSLSYALGAGPLFDVSEDSDYVHTLL KAIDEYASL+SK
Sbjct: 61   HQRQLAALLVSKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAKAIDEYASLRSK 120

Query: 121  AAESGDTSIKSDPRLEAIVERMFDKCIMDGKYQQAMGTAIECRRLDKLEEAITKSDNVQG 180
            A ES +  +  DPRLEAIVERM  KCI DGKYQQAMG AIECRRLDKLEEAI KSDNVQG
Sbjct: 121  AVESNEM-VDIDPRLEAIVERMLGKCISDGKYQQAMGIAIECRRLDKLEEAIIKSDNVQG 179

Query: 181  TLSYCINVSHSFVNLREYRQEVLRLLVKVFQKLSSPDYLSICQCLMFLDEPEGVASILER 240
            TLSYCINVSHSFVN REYR EVL LLVKV+QKL SPDYLSICQCLMFLDEP+GVASILE+
Sbjct: 180  TLSYCINVSHSFVNRREYRHEVLSLLVKVYQKLPSPDYLSICQCLMFLDEPQGVASILEK 239

Query: 241  LLRSENKYDALLAFQIAFDLVENEHQAFLLSVRDRLASPKLPSESAQPKPSDTGSTPSAS 300
            LLRSENK DALLA QIAFDLVENEHQAFLLSVRDRL +PK  +  A        +T + +
Sbjct: 240  LLRSENKDDALLALQIAFDLVENEHQAFLLSVRDRLPAPKTRAVEAT---QAVETTIAPN 296

Query: 301  ANAPDDVQMEDGDSASIVNVPEDPSEKMYAERLNKIKGILSGETSIQLTLQFLYSHNKSD 360
             N   DVQM D   A  +    DP +  YAERL KIKGILSGETSIQLTLQFLYSHNKSD
Sbjct: 297  ENPSGDVQMADETPAQTIVHETDPVDATYAERLTKIKGILSGETSIQLTLQFLYSHNKSD 356

Query: 361  LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLEWLSRATNWAKFSATAG 420
            LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENL+WLSRATNWAKFSATAG
Sbjct: 357  LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAG 416

Query: 421  LGVIHRGHLQQGRSLMAPYLPQXXXXXXXXXXXXXXALYALGLIHANHGEGIKQFLRDSL 480
            LGVIHRGHLQQGRSLMAPYLPQ              ALYALGLIHANHGEGIKQFLRDSL
Sbjct: 417  LGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSL 476

Query: 481  RSTTVEVIQHXXXXXXXXXXXXXXDEDIYEEIKNVLYTDSAVAGEAAGISMGLLMVGTGS 540
            RST VEVIQH              DE+IY+++K+VLYTDSAVAGEAAGISMGLL+VGT +
Sbjct: 477  RSTNVEVIQHGACLGLGLSALGTADEEIYDDVKSVLYTDSAVAGEAAGISMGLLLVGTAT 536

Query: 541  EKANEMLTYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPILRYGGMYAL 600
            EKA+EML YAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPI+RYGGMYAL
Sbjct: 537  EKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYAL 596

Query: 601  ALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNP 660
            ALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNP
Sbjct: 597  ALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNP 656

Query: 661  HVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRV 720
            HVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRV
Sbjct: 657  HVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRV 716

Query: 721  GTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLAVF 780
            G FRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDK+TAV+GLAVF
Sbjct: 717  GVFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLAVF 776

Query: 781  SQFWYWYPLIYFISLSFSPTALIGLNYDLKSPKFEFLSHAKPSLFEYXXXXXXXXXXXXX 840
            SQFWYWYPLIYFISL+FSPTA IGLNYDLK PKFEF+SHAKPSLFEY             
Sbjct: 777  SQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVPTANTAV 836

Query: 841  XXXXAVLSTSXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXXVEKEGDTMQVDS 900
                AVLSTS                                       EKEGD+MQVDS
Sbjct: 837  KLPTAVLSTSVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKGKASTEKEGDSMQVDS 896

Query: 901  PTXXXXXX---XXSFEILTNPARVVPAQEKFIKFLQDSRYAPVKLAPSGFVLLKDLRPTE 957
            P            +FEIL NPARVVPAQEK+IK L DSRY PVKLAPSGFVLLKDLR  E
Sbjct: 897  PAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKLAPSGFVLLKDLREHE 956

Query: 958  PEVLAITVTPXXXXXXXXXXXXXXXXX-XXXMAVDEEPQPPQPFEYSS 1004
            PEVL++T  P                     MAVD+EPQPPQ FEY+S
Sbjct: 957  PEVLSLTDAPTSTASPATGTAAAAQGTPASAMAVDDEPQPPQAFEYAS 1004


>AT1G04810.1 | Symbols:  | 26S proteasome regulatory complex,
            non-ATPase subcomplex, Rpn2/Psmd1 subunit |
            chr1:1350304-1355261 FORWARD LENGTH=1001
          Length = 1001

 Score = 1518 bits (3930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 764/1012 (75%), Positives = 818/1012 (80%), Gaps = 20/1012 (1%)

Query: 1    MATTLVSSAGGMLAMLNESHLSLKLHALSNLNNLVDTFWPEISTSVPLIESLYEDEEFDQ 60
            MA  +VSSAGG+LAMLNE H SLKLHALS L  LVD FWPEISTSVP+IESLYEDEEFDQ
Sbjct: 1    MAAAMVSSAGGLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQ 60

Query: 61   HQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDVSEDSDYVHTLLVKAIDEYASLKSK 120
            HQRQLAAL+ SKVFYYLGEL+DSLSYALGAG LFDVSEDSDY+HTLL KAIDEYA L+SK
Sbjct: 61   HQRQLAALLASKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSKAIDEYAILRSK 120

Query: 121  AAESGDTSIKSDPRLEAIVERMFDKCIMDGKYQQAMGTAIECRRLDKLEEAITKSDNVQG 180
            A ES +  ++ DPRL AIVERM DKCI DGKYQQAMG AIECRRLDKLEEAI KS+NVQG
Sbjct: 121  AVESSEV-VEIDPRLVAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAIIKSENVQG 179

Query: 181  TLSYCINVSHSFVNLREYRQEVLRLLVKVFQKLSSPDYLSICQCLMFLDEPEGVASILER 240
            TLSYCINVSHSFVN REYR EVLRLLV V+QKL+SPDYLSICQCLMFLDEP+GVASILE+
Sbjct: 180  TLSYCINVSHSFVNQREYRHEVLRLLVNVYQKLASPDYLSICQCLMFLDEPQGVASILEK 239

Query: 241  LLRSENKYDALLAFQIAFDLVENEHQAFLLSVRDRLASPKL-PSESAQPKPSDTGSTPSA 299
            LLRSENK DALLAFQI+FDLV+NEHQAFL+SVRDRL +PK  P E+ Q   + T      
Sbjct: 240  LLRSENKDDALLAFQISFDLVQNEHQAFLMSVRDRLPAPKTRPVEAIQAVETSTAQ---- 295

Query: 300  SANAPDDVQMEDGDSASIVNVPEDPSEKMYAERLNKIKGILSGETSIQLTLQFLYSHNKS 359
            + N   DVQM D   +  +    DP + +YAERL K KGILSGETSIQLTLQFLYSHNKS
Sbjct: 296  NENTAGDVQMADETPSQTIVHETDPVDAVYAERLTKAKGILSGETSIQLTLQFLYSHNKS 355

Query: 360  DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLEWLSRATNWAKFSATA 419
            DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENL+WLSRATNWAKFSATA
Sbjct: 356  DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 415

Query: 420  GLGVIHRGHLQQGRSLMAPYLPQXXXXXXXXXXXXXXALYALGLIHANHGEGIKQFLRDS 479
            GLGVIHRGHLQQGRSLMAPYLPQ              ALYALGLIHANHGEGIKQFLRDS
Sbjct: 416  GLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDS 475

Query: 480  LRSTTVEVIQHXXXXXXXXXXXXXXDEDIYEEIKNVLYTDSAVAGEAAGISMGLLMVGTG 539
            LRST+VEVIQH              DEDIY++IK+VLYTDSAVAGEAAGISMGLL+VGT 
Sbjct: 476  LRSTSVEVIQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAAGISMGLLLVGTA 535

Query: 540  SEKANEMLTYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPILRYGGMYA 599
            ++KA+EML YAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPI+RYGGMYA
Sbjct: 536  TDKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYA 595

Query: 600  LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN 659
            LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN
Sbjct: 596  LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN 655

Query: 660  PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR 719
            PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR
Sbjct: 656  PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR 715

Query: 720  VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLAV 779
            VG FRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDK+TAV+GL V
Sbjct: 716  VGAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLTV 775

Query: 780  FSQFWYWYPLIYFISLSFSPTALIGLNYDLKSPKFEFLSHAKPSLFEYXXXXXXXXXXXX 839
            FSQFWYWYPLIYFISL+FSPTA IGLNYDLK PKFEF+SHAKPSLFEY            
Sbjct: 776  FSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVATANTA 835

Query: 840  XXXXXAVLSTSXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXXVEKEGDTMQVD 899
                 AVLSTS                                       EKE ++MQVD
Sbjct: 836  AKLPTAVLSTSAKAKAKAKKEAE-------QKAKAENSGNEAGKANAASDEKEAESMQVD 888

Query: 900  SPTXXXXXXX---XSFEILTNPARVVPAQEKFIKFLQDSRYAPVKLAPSGFVLLKDLRPT 956
            S             +FEIL NPARVVP+QEK+IK ++DSRY P+KLAPSGFVLL+DLRP 
Sbjct: 889  STATTVEKKVEPEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPH 948

Query: 957  EPEVLAITVTPXXXXX----XXXXXXXXXXXXXXXMAVDEEPQPPQPFEYSS 1004
            EPEVL++T  P                        MA+D+EPQPPQ FEY+S
Sbjct: 949  EPEVLSLTDAPTSTASPAVGAEAAGQAQQAATTSAMAIDDEPQPPQAFEYAS 1000