Miyakogusa Predicted Gene

Lj4g3v3113260.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113260.2 tr|I1KQC8|I1KQC8_SOYBN Glutamyl-tRNA(Gln)
amidotransferase subunit B, chloroplastic/mitochondrial
OS,87.8,0,seg,NULL; gatB: aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransfe,Aspartyl/glutamyl-tRNA(Asn/Gln) amidotr,CUFF.52340.2
         (540 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48520.1 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-...   847   0.0  
AT1G48520.3 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-...   734   0.0  
AT1G48520.2 | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-...   704   0.0  

>AT1G48520.1 | Symbols: GATB | GLU-ADT subunit B |
           chr1:17940185-17942540 FORWARD LENGTH=550
          Length = 550

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/549 (73%), Positives = 469/549 (85%), Gaps = 10/549 (1%)

Query: 1   MASTIFRTFQLHPFLLCPASFLR---TTNGVVLRCASSDTQQRQPQ----TKVSTQYKK- 52
           M++T+ RT QL+ F L   S LR   + N  V  C S  T   + +    T+V+ +  K 
Sbjct: 1   MSTTLLRTIQLNQFSLLGTSLLRRRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKNHKS 60

Query: 53  --LDKIPKDYEAVIGIETHVQLSTLTKAFCGCPYSYGSPPNTTVCPVCMGLPGALPVLNS 110
             LD+I +DYEAVIGIETHVQLSTLTKAFC C  +YGS PNT++CPVCMGLPGALPVLNS
Sbjct: 61  NQLDEILRDYEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNS 120

Query: 111 KVIDFAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPLEF 170
           KV++F V+LGLALNC+LS  SKFDRKQYFYPDLPKGYQISQFD+PIA+GGY+ VDIPLEF
Sbjct: 121 KVVEFGVRLGLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEF 180

Query: 171 GGGHRKFGITRVHMEEDAGKLLHTENENYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYA 230
           GGGHR+FGITRVHMEEDAGKLLH++  +YSQVDLNRAGVPLLEIVSEPDMR+GIEAAEYA
Sbjct: 181 GGGHRRFGITRVHMEEDAGKLLHSDTGDYSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYA 240

Query: 231 AEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFE 290
            E+QR+ RYLGVSNGNMQEGSLRCDVN+SIRPIGQ++FGTKVEIKNLN+FSA+SRAIDFE
Sbjct: 241 CEMQRIARYLGVSNGNMQEGSLRCDVNISIRPIGQAEFGTKVEIKNLNAFSAISRAIDFE 300

Query: 291 IARQVQLHSNGQEDQIVQETRLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYV 350
           I+RQ  L++ G+ DQIV ETRLWEEG+Q+T+TMR KEGLADYRYFPEPDLP VI++QEYV
Sbjct: 301 ISRQALLYNQGKADQIVTETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVILTQEYV 360

Query: 351 DGIRNSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGADAKLVANWIMS 410
           D IR SLPELPE KRRRYE MGL MQDVLFLAND ++AE+FDA + KGA+ KL ANWIMS
Sbjct: 361 DSIRASLPELPEAKRRRYEAMGLGMQDVLFLANDVSVAEYFDAVIGKGAEVKLAANWIMS 420

Query: 411 DIAAFMKNEKLSINEIKLTPEELSELIASXXXXXXXXXXXXEILFELLAKGGSVKELIEK 470
           DIAA++KNEKLSIN+IKLTP+EL+ELIA+            EILFELLAKGG+VK +I+ 
Sbjct: 421 DIAAYLKNEKLSINDIKLTPQELAELIAAIKDGTISGKIGKEILFELLAKGGTVKGMIKA 480

Query: 471 KDLVQIADPAEIEKMVDKVIAENPKQVEQYRGGKTKLQGFFAGQVMKLSKGKANPGLLNK 530
           KDLVQI DPAEIEKMV +V++ENPKQ+EQYR GKTKLQG+FAGQVMK+SKGKANPGLLNK
Sbjct: 481 KDLVQITDPAEIEKMVIQVVSENPKQLEQYRSGKTKLQGYFAGQVMKMSKGKANPGLLNK 540

Query: 531 ILLEKLNSK 539
           ILLEKLN+K
Sbjct: 541 ILLEKLNAK 549


>AT1G48520.3 | Symbols: GATB | GLU-ADT subunit B |
           chr1:17940185-17942272 FORWARD LENGTH=488
          Length = 488

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/485 (72%), Positives = 408/485 (84%), Gaps = 10/485 (2%)

Query: 1   MASTIFRTFQLHPFLLCPASFLR---TTNGVVLRCASSDTQQRQPQ----TKVSTQYKK- 52
           M++T+ RT QL+ F L   S LR   + N  V  C S  T   + +    T+V+ +  K 
Sbjct: 1   MSTTLLRTIQLNQFSLLGTSLLRRRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKNHKS 60

Query: 53  --LDKIPKDYEAVIGIETHVQLSTLTKAFCGCPYSYGSPPNTTVCPVCMGLPGALPVLNS 110
             LD+I +DYEAVIGIETHVQLSTLTKAFC C  +YGS PNT++CPVCMGLPGALPVLNS
Sbjct: 61  NQLDEILRDYEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNS 120

Query: 111 KVIDFAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPLEF 170
           KV++F V+LGLALNC+LS  SKFDRKQYFYPDLPKGYQISQFD+PIA+GGY+ VDIPLEF
Sbjct: 121 KVVEFGVRLGLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEF 180

Query: 171 GGGHRKFGITRVHMEEDAGKLLHTENENYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYA 230
           GGGHR+FGITRVHMEEDAGKLLH++  +YSQVDLNRAGVPLLEIVSEPDMR+GIEAAEYA
Sbjct: 181 GGGHRRFGITRVHMEEDAGKLLHSDTGDYSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYA 240

Query: 231 AEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFE 290
            E+QR+ RYLGVSNGNMQEGSLRCDVN+SIRPIGQ++FGTKVEIKNLN+FSA+SRAIDFE
Sbjct: 241 CEMQRIARYLGVSNGNMQEGSLRCDVNISIRPIGQAEFGTKVEIKNLNAFSAISRAIDFE 300

Query: 291 IARQVQLHSNGQEDQIVQETRLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYV 350
           I+RQ  L++ G+ DQIV ETRLWEEG+Q+T+TMR KEGLADYRYFPEPDLP VI++QEYV
Sbjct: 301 ISRQALLYNQGKADQIVTETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVILTQEYV 360

Query: 351 DGIRNSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGADAKLVANWIMS 410
           D IR SLPELPE KRRRYE MGL MQDVLFLAND ++AE+FDA + KGA+ KL ANWIMS
Sbjct: 361 DSIRASLPELPEAKRRRYEAMGLGMQDVLFLANDVSVAEYFDAVIGKGAEVKLAANWIMS 420

Query: 411 DIAAFMKNEKLSINEIKLTPEELSELIASXXXXXXXXXXXXEILFELLAKGGSVKELIEK 470
           DIAA++KNEKLSIN+IKLTP+EL+ELIA+            EILFELLAKGG+VK +I+ 
Sbjct: 421 DIAAYLKNEKLSINDIKLTPQELAELIAAIKDGTISGKIGKEILFELLAKGGTVKGMIKA 480

Query: 471 KDLVQ 475
           KDLVQ
Sbjct: 481 KDLVQ 485


>AT1G48520.2 | Symbols: GATB | GLU-ADT subunit B |
           chr1:17940185-17942075 FORWARD LENGTH=475
          Length = 475

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/449 (73%), Positives = 386/449 (85%), Gaps = 10/449 (2%)

Query: 1   MASTIFRTFQLHPFLLCPASFLR---TTNGVVLRCASSDTQQRQPQ----TKVSTQYKK- 52
           M++T+ RT QL+ F L   S LR   + N  V  C S  T   + +    T+V+ +  K 
Sbjct: 1   MSTTLLRTIQLNQFSLLGTSLLRRRRSNNFSVRSCGSQTTTTHEAKQSSPTRVAPKNHKS 60

Query: 53  --LDKIPKDYEAVIGIETHVQLSTLTKAFCGCPYSYGSPPNTTVCPVCMGLPGALPVLNS 110
             LD+I +DYEAVIGIETHVQLSTLTKAFC C  +YGS PNT++CPVCMGLPGALPVLNS
Sbjct: 61  NQLDEILRDYEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNS 120

Query: 111 KVIDFAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPLEF 170
           KV++F V+LGLALNC+LS  SKFDRKQYFYPDLPKGYQISQFD+PIA+GGY+ VDIPLEF
Sbjct: 121 KVVEFGVRLGLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEF 180

Query: 171 GGGHRKFGITRVHMEEDAGKLLHTENENYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYA 230
           GGGHR+FGITRVHMEEDAGKLLH++  +YSQVDLNRAGVPLLEIVSEPDMR+GIEAAEYA
Sbjct: 181 GGGHRRFGITRVHMEEDAGKLLHSDTGDYSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYA 240

Query: 231 AEIQRLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFE 290
            E+QR+ RYLGVSNGNMQEGSLRCDVN+SIRPIGQ++FGTKVEIKNLN+FSA+SRAIDFE
Sbjct: 241 CEMQRIARYLGVSNGNMQEGSLRCDVNISIRPIGQAEFGTKVEIKNLNAFSAISRAIDFE 300

Query: 291 IARQVQLHSNGQEDQIVQETRLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYV 350
           I+RQ  L++ G+ DQIV ETRLWEEG+Q+T+TMR KEGLADYRYFPEPDLP VI++QEYV
Sbjct: 301 ISRQALLYNQGKADQIVTETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVILTQEYV 360

Query: 351 DGIRNSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGADAKLVANWIMS 410
           D IR SLPELPE KRRRYE MGL MQDVLFLAND ++AE+FDA + KGA+ KL ANWIMS
Sbjct: 361 DSIRASLPELPEAKRRRYEAMGLGMQDVLFLANDVSVAEYFDAVIGKGAEVKLAANWIMS 420

Query: 411 DIAAFMKNEKLSINEIKLTPEELSELIAS 439
           DIAA++KNEKLSIN+IKLTP+EL+ELIA+
Sbjct: 421 DIAAYLKNEKLSINDIKLTPQELAELIAA 449