Miyakogusa Predicted Gene

Lj4g3v3113180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113180.1 tr|D7KAK3|D7KAK3_ARALL At1g68060/T23K23_9
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890198
P,74.24,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Myosin_HC-like,Myosin II heavy ch,CUFF.52341.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G24764.1 | Symbols: ATMAP70-2, MAP70-2 | microtubule-associat...   100   3e-22
AT1G68060.1 | Symbols: ATMAP70-1, MAP70-1 | microtubule-associat...    90   3e-19
AT2G01750.1 | Symbols: ATMAP70-3, MAP70-3 | microtubule-associat...    80   3e-16
AT2G01750.2 | Symbols: MAP70-3 | microtubule-associated proteins...    78   1e-15
AT1G14840.1 | Symbols: ATMAP70-4, MAP70-4 | microtubule-associat...    77   2e-15
AT1G14840.2 | Symbols: MAP70-4 | microtubule-associated proteins...    77   2e-15

>AT1G24764.1 | Symbols: ATMAP70-2, MAP70-2 | microtubule-associated
           proteins 70-2 | chr1:8760001-8763256 REVERSE LENGTH=634
          Length = 634

 Score = 99.8 bits (247), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 61/67 (91%), Gaps = 2/67 (2%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIEKEQDSRSKRFSSVKGPMNSAQ 64
            +MLAKKV+TLTKAMEVEAKKMRREVA+MEKEVAAMR+EK+QD+R+KRFS+ K P N+A 
Sbjct: 557 IEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVAAMRVEKDQDARAKRFSNSKSPSNTA- 615

Query: 65  HQLVSGR 71
            Q+++GR
Sbjct: 616 -QILAGR 621


>AT1G68060.1 | Symbols: ATMAP70-1, MAP70-1 | microtubule-associated
           proteins 70-1 | chr1:25511392-25514226 REVERSE
           LENGTH=622
          Length = 622

 Score = 89.7 bits (221), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 54/59 (91%)

Query: 6   QMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIEKEQDSRSKRFSSVKGPMNSAQ 64
           +MLAKKV+TLTKAMEVEAKKMRREVA+MEKEVAAMR++K+QD+R+KR S+ K   N+AQ
Sbjct: 547 EMLAKKVETLTKAMEVEAKKMRREVAAMEKEVAAMRVDKDQDNRAKRSSNTKPSSNTAQ 605


>AT2G01750.1 | Symbols: ATMAP70-3, MAP70-3 | microtubule-associated
           proteins 70-3 | chr2:328351-331848 FORWARD LENGTH=629
          Length = 629

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%), Gaps = 4/69 (5%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIE-KEQDSRSKRFSS-VKGPMNS 62
            +MLAKKV+TLTKAMEVEAKKMRREVA+MEKEV+AMR++ K  DSR++R S+  KG   +
Sbjct: 551 IEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVSAMRVDNKGSDSRTRRHSTNSKGASTT 610

Query: 63  AQHQLVSGR 71
           A  QL+SGR
Sbjct: 611 A--QLLSGR 617


>AT2G01750.2 | Symbols: MAP70-3 | microtubule-associated proteins
           70-3 | chr2:328351-331848 FORWARD LENGTH=630
          Length = 630

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 4/68 (5%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRIE-KEQDSRSKRFSS-VKGPMNS 62
            +MLAKKV+TLTKAMEVEAKKMRREVA+MEKEV+AMR++ K  DSR++R S+  KG   +
Sbjct: 551 IEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVSAMRVDNKGSDSRTRRHSTNSKGASTT 610

Query: 63  AQHQLVSG 70
           A  QL+SG
Sbjct: 611 A--QLLSG 616


>AT1G14840.1 | Symbols: ATMAP70-4, MAP70-4 | microtubule-associated
           proteins 70-4 | chr1:5112415-5115299 REVERSE LENGTH=604
          Length = 604

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 56/69 (81%), Gaps = 6/69 (8%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRI--EKEQDSRSKRFSSVKGPMNS 62
            +MLAKKV+TLTKAM+VEAKKMRREVA M KEVAAMR+  + +QDS+++R S  KG  N+
Sbjct: 528 IEMLAKKVETLTKAMDVEAKKMRREVAVMGKEVAAMRVVDKGQQDSKTRRLSVSKG--NT 585

Query: 63  AQHQLVSGR 71
           A  QL+SGR
Sbjct: 586 A--QLLSGR 592


>AT1G14840.2 | Symbols: MAP70-4 | microtubule-associated proteins
           70-4 | chr1:5112415-5115299 REVERSE LENGTH=589
          Length = 589

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 56/69 (81%), Gaps = 6/69 (8%)

Query: 5   CQMLAKKVDTLTKAMEVEAKKMRREVASMEKEVAAMRI--EKEQDSRSKRFSSVKGPMNS 62
            +MLAKKV+TLTKAM+VEAKKMRREVA M KEVAAMR+  + +QDS+++R S  KG  N+
Sbjct: 513 IEMLAKKVETLTKAMDVEAKKMRREVAVMGKEVAAMRVVDKGQQDSKTRRLSVSKG--NT 570

Query: 63  AQHQLVSGR 71
           A  QL+SGR
Sbjct: 571 A--QLLSGR 577