Miyakogusa Predicted Gene

Lj4g3v3113120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113120.1 Non Chatacterized Hit- tr|I1KQB7|I1KQB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45155
PE,91.92,0,Nucleoporin_C,Nucleoporin, Nup133/Nup155-like, C-terminal;
Nucleoporin_N,Nucleoporin, Nup133/Nup155-,CUFF.52325.1
         (1482 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14850.1 | Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5...  2052   0.0  

>AT1G14850.1 | Symbols: NUP155 | nucleoporin 155 |
            chr1:5116921-5123259 REVERSE LENGTH=1464
          Length = 1464

 Score = 2052 bits (5316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1046/1490 (70%), Positives = 1204/1490 (80%), Gaps = 37/1490 (2%)

Query: 1    MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDFEEALEASRYVSHPYSTQPREWPPLVEV 60
            MS +DEIVMRDVT+AG+ + DRIGRE +SQLD EEALEASRY SHPYST PREWPPL+EV
Sbjct: 1    MSQDDEIVMRDVTSAGICIGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV 60

Query: 61   VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE 120
              TWELP VLIERYN AGGEGTA CGIFPEIRRAWASVDNSLFLWRFDK DGQCPEYSGE
Sbjct: 61   GETWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGE 120

Query: 121  EQAICAVGLAKSKPGVFVEAIQYLLILATPVELILVGVCCSGGADDSDPFEEVSLQPLPE 180
            EQAICAVGLAK +PGVFVEAIQYLL+LATPVEL+LVGVCC+ G D  DP+ E+S+QPLP+
Sbjct: 121  EQAICAVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPD 180

Query: 181  YTIPSDGVTMTCVSCTDKGRIFLAGRDGHIYELLYSTGSGWQKRCRKICVTAGLGSVISR 240
            YTI SDGVTMTCV+CT+KGRIF+AGRDGHIYELLY+TGSGW KRCRK+C+TAG+GS+ISR
Sbjct: 181  YTISSDGVTMTCVTCTNKGRIFMAGRDGHIYELLYTTGSGWNKRCRKVCLTAGVGSMISR 240

Query: 241  WVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGQLKKVAEEKNLVN 300
            WV+PNVF FGAVDP+VEMV DNERQILYARTEEMKLQ YV GPNG+G LKKVAEE+NL+N
Sbjct: 241  WVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAYVSGPNGEGPLKKVAEERNLLN 300

Query: 301  QRD-AQGRQSTGSRVSSRLPKPSIVCISPLSTLESKLLHLVAVLSDGRRMY----XXXXX 355
            Q+D +QG +   S V+ R  KPSIV ISPLS LESK LHLVA LSDGRRMY         
Sbjct: 301  QKDLSQGNRQ--SAVAGRSNKPSIVSISPLSMLESKWLHLVAALSDGRRMYLSTSSSGSG 358

Query: 356  XXXXXXXFNTNHHKPSCLKVVATRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVDAAYY 415
                   FN +   P+CLKVV+TRP+PP GV  GL FG  ++AGR QN+DLS+K++ AYY
Sbjct: 359  STISFSGFNNHRQTPNCLKVVSTRPSPPLGVGVGLGFGAASVAGRTQNDDLSMKIETAYY 418

Query: 416  STGTLILSDASPSTIPSLLVLNRDXXXXXXXXGNLGTGMRSSRALRESVSSLPVEGRMLS 475
            S GTL+LSD+SP  + SLLV++RD         + G   RSSRALRE VSSLP+EGRML 
Sbjct: 419  SVGTLVLSDSSPPAMSSLLVVSRDSSVHSQAGSSSGPSSRSSRALREVVSSLPIEGRMLF 478

Query: 476  VADVLPLPDTAATVRSLYSEIEFGGYENSMESCERASGKLWSRGDLSTQHILPRRRIVIF 535
            VADVLP PDTAAT++SLYSE+E+ G E S ES E+A GKLW+R DLSTQHILPRR+IV+F
Sbjct: 479  VADVLPSPDTAATIQSLYSELEYCGVEVSGESYEKACGKLWARSDLSTQHILPRRKIVVF 538

Query: 536  STMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLI 595
            +TMGMME+VFNRP+DILRRLLESNSPRS+LEDFF RFG GEAAAMCLMLAARI++ E+LI
Sbjct: 539  TTMGMMELVFNRPVDILRRLLESNSPRSLLEDFFTRFGVGEAAAMCLMLAARIINFEDLI 598

Query: 596  SNVIAEKAAEAFEDPRVVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLC 655
            SN++A+KAAEAFEDPR+VGMPQ +GSS LSNTRTA GGFSMGQVVQEAEP+FSGAHEGLC
Sbjct: 599  SNIVADKAAEAFEDPRIVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHEGLC 658

Query: 656  LCSSRLLFPLWELPVMVVKGSLGPSGTLSENGVVVCRLSVGAMQVLELKLRSLEKFLRSR 715
            LC+SRLLFPLWELPVM  K S   S T+SE+GVV+CRLS  AM VLE K+RSLEKFLRSR
Sbjct: 659  LCTSRLLFPLWELPVMSKKTS---SDTMSEDGVVICRLSTSAMHVLESKIRSLEKFLRSR 715

Query: 716  RNQRRGLYGCVAGLGDVSGSILYGNGSALGAGDRSMVRSLFGAYSRNMESNGGGTTNKRQ 775
            RNQRRGLYGCVAGLGDV+GSILYG GS LGA +R+MVR+LFGAY     SNGG + NKRQ
Sbjct: 716  RNQRRGLYGCVAGLGDVTGSILYGTGSELGATERNMVRNLFGAY-----SNGGESANKRQ 770

Query: 776  RLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQHALVQL 835
            RLPYSPAELAA EVRAMECIRQLLLRS EALFLLQLLSQHHV RL+Q  DANL+ ALVQL
Sbjct: 771  RLPYSPAELAATEVRAMECIRQLLLRSAEALFLLQLLSQHHVARLVQELDANLKQALVQL 830

Query: 836  TFHQLVCSEEGDRLATRLISALMEYYTGPDGRGTVDDISRRLREGCPSYYKESDYKFFLS 895
            TFHQLVCSEEGD++ATRLISA+MEYYTG DGRGTVDDIS RLREGCPSY+KESDYKF+L+
Sbjct: 831  TFHQLVCSEEGDQIATRLISAVMEYYTGSDGRGTVDDISPRLREGCPSYFKESDYKFYLA 890

Query: 896  VEALERAAVTVDAEEKENLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKA 955
            VE LERAA+T DAEEKEN+AREA + LSKVP SADL+TVCKRFEDLRFYEAVVCLPLQKA
Sbjct: 891  VERLERAALTSDAEEKENVAREAFSFLSKVPGSADLQTVCKRFEDLRFYEAVVCLPLQKA 950

Query: 956  QALDPAGDAYNDDIDATVREQALVQREQCYEVIISALRSLKGDTLQKEFGSPIRSAASQS 1015
            QALDPAGDA+ND +DA++RE AL QR+QCYE+I +ALRSL          SP+ S     
Sbjct: 951  QALDPAGDAFNDQLDASIREHALAQRKQCYEIIANALRSL---------ASPLASP---- 997

Query: 1016 ALDPASRRKYISQIVQLGVQSPDRIFHEYLYQAMIDXXXXXXXXXXXXPDLLPFLQSAGR 1075
             LD ASR +YI QIV LGVQS DR F EYLY+AMI+            PDL+PFLQ+AG 
Sbjct: 998  TLDEASRSQYICQIVHLGVQSTDRAFREYLYKAMIELHLENELLEYGGPDLVPFLQNAGS 1057

Query: 1076 KPIHEVRAVTATTSPIGQSGAPLSSNQVKYYELLARYYVLKRQHMXXXXXXXXXXXXXSI 1135
                +V AV+  +SP+G SG  +SS+Q KY++LLA+YYV KRQH+             +I
Sbjct: 1058 HSESQVGAVSTGSSPLGHSGTQISSDQAKYFDLLAKYYVSKRQHVLAAHVFLRLAERRAI 1117

Query: 1136 D--GVPTLEQRCQYLSNAVLQAKNATNNDGLVGSTRSSFDSGFLDLLEGKLAVLRFQIKI 1193
                 PTLE+R   LS AVLQAKNA+N+DGLVGS +   DSG LDLLEGKLAVL+FQIKI
Sbjct: 1118 SLGDSPTLERRRDDLSQAVLQAKNASNSDGLVGSAQGVSDSGLLDLLEGKLAVLQFQIKI 1177

Query: 1194 KEEFEAMASRSEGLQGTPDSVQNGLVPEGSSTADPNFANAIREKAKELSSDVKSITQLYN 1253
            +++ EA+AS  E      DS QNG V +G S+ D N ANA  E A E+SS++KS+TQLYN
Sbjct: 1178 RDKLEAIASNFESSVAMQDSDQNGQVLDGDSSDDTNLANAANEMAMEVSSELKSVTQLYN 1237

Query: 1254 EYAVPFELWEICLEMLYFANYSGENDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPR 1313
            EYAVPFELWEICLEMLYFANYSG+ DSSI+RETWARLIDQA+S+GGI EAC+VLKRVG  
Sbjct: 1238 EYAVPFELWEICLEMLYFANYSGDADSSIIRETWARLIDQALSQGGIREACAVLKRVGSH 1297

Query: 1314 IYPGDGAVLPLDIICLHLEKAGLERLNSGVEPVGDEDVARALVSACKGSAEPVLNAYDQL 1373
            IYPGDG VLPLD++CLHLE+A LER +  +E V DED+A+AL++ACKG+AEPVLNAYD+L
Sbjct: 1298 IYPGDGVVLPLDVLCLHLERAALER-SERIENVRDEDIAKALLAACKGAAEPVLNAYDRL 1356

Query: 1374 LSNGAXXXXXXXXXXXXXXXXXXXXEWATSVYSHRMGIGASPSR---VLEGGFSLERTVA 1430
            LSN A                    EWA SV S RM  G+SP+R   +L G F+LE   A
Sbjct: 1357 LSNAAVVPSPNLRIRLLRSVLVVLREWAMSVLSDRM--GSSPTRSSLILGGSFALENKAA 1414

Query: 1431 -SQGIRDKITSAANRYMTEVRRLALPQNQTEVVYRGFRELEESVISPHSF 1479
             +QG RDKI +AANRYMTEVRRLALP N+T+ VY GF+EL+ES++SP SF
Sbjct: 1415 LNQGARDKIANAANRYMTEVRRLALPPNKTDGVYAGFKELDESLLSPFSF 1464