Miyakogusa Predicted Gene

Lj4g3v3113090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113090.1 CUFF.52327.1
         (694 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01690.1 | Symbols:  | ARM repeat superfamily protein | chr2:...  1080   0.0  
AT2G01690.2 | Symbols:  | ARM repeat superfamily protein | chr2:...  1076   0.0  

>AT2G01690.1 | Symbols:  | ARM repeat superfamily protein |
           chr2:309144-313499 REVERSE LENGTH=743
          Length = 743

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/675 (79%), Positives = 584/675 (86%), Gaps = 8/675 (1%)

Query: 1   MADALSLIPAAVLRNLADKLYEKRKNAALEIEGIVKQLATGGDHDKIAAVVKLLTTEFTF 60
           M+DALS IPAAV RNL+DKLYEKRKNAALE+E IVK L + GDHDKI+ V+++L  EF  
Sbjct: 1   MSDALSAIPAAVHRNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAK 60

Query: 61  SPQANQRKGGLIGLAAATVGLASEAAQHLEHIVPPVLNSFSDQDSRVRYYACEALYNIAK 120
           SPQAN RKGGLIGLAA TVGL++EAAQ+LE IVPPV+NSFSDQDSRVRYYACEALYNIAK
Sbjct: 61  SPQANHRKGGLIGLAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAK 120

Query: 121 VVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRE 180
           VVRGDFI+FFN+IFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLL+E
Sbjct: 121 VVRGDFIIFFNKIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLKE 180

Query: 181 RMNVLNPYVRQFLVGWITVLDSVPDIDMXXXXXXXXXXXXNMLSDSSHEIRQQADSALSE 240
           RMNVLNPYVRQFLVGWITVLDSVPDIDM            NMLSDSSHEIRQQADSALSE
Sbjct: 181 RMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSE 240

Query: 241 FLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGA 300
           FLQEIKNSPSVDYGRMAEILVQRA SPDEFTRLTAITWINEFVKLGGDQLV YYADILGA
Sbjct: 241 FLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVRYYADILGA 300

Query: 301 ILPCISDKEEKIRVVARETNEELRTIKADPAEGFDVGAILSIARRQLSSDWEATRIEALH 360
           ILPCISDKEEKIRVVARETNEELR+I  +P++GFDVGAILS+ARRQLSS++EATRIEAL+
Sbjct: 301 ILPCISDKEEKIRVVARETNEELRSIHVEPSDGFDVGAILSVARRQLSSEFEATRIEALN 360

Query: 361 WISTLLNKHRTEVLQYLNDIFDSLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFL 420
           WISTLLNKHRTEVL +LNDIFD+LLKALSD SD+VVLLVL+VHA +AKDPQHFRQL+VFL
Sbjct: 361 WISTLLNKHRTEVLCFLNDIFDTLLKALSDSSDDVVLLVLEVHAGVAKDPQHFRQLIVFL 420

Query: 421 VHNFRIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQAXXXXXX 480
           VHNFR DNSLLE+RGALI+RR+CVLL+AERVYRELSTILEGE +LDFAS MVQA      
Sbjct: 421 VHNFRADNSLLERRGALIVRRMCVLLDAERVYRELSTILEGEDNLDFASTMVQALNLILL 480

Query: 481 XXXXXXXXRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASTVIQSLV 540
                   R+LLK SLVN  GK+L+V+LY SWCHSPMAIISLCLLAQ YQHAS VIQSLV
Sbjct: 481 TSPELSKLRELLKGSLVNREGKELFVALYTSWCHSPMAIISLCLLAQAYQHASVVIQSLV 540

Query: 541 EEDINVKLLVQLDKLIRLLETPVFTYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKI 600
           EEDINVK LVQLDKLIRLLETP+FTYLRLQLLEPGRY WL K LYGLLMLLPQQSAAFKI
Sbjct: 541 EEDINVKFLVQLDKLIRLLETPIFTYLRLQLLEPGRYTWLLKTLYGLLMLLPQQSAAFKI 600

Query: 601 LKTRLKAVPSFSFN-GEQLKKTSSGNPYQFLHHMSGGSHTSEDGDITADSGN-SHNGINF 658
           L+TRLK VP++SF+ G Q+ + +SG P+      S   H +EDGD+  D+ N SH GINF
Sbjct: 601 LRTRLKTVPTYSFSTGNQIGRATSGVPF------SQYKHQNEDGDLEDDNINSSHQGINF 654

Query: 659 AARLXXXXXXXXXHR 673
           A RL         HR
Sbjct: 655 AVRLQQFENVQNLHR 669


>AT2G01690.2 | Symbols:  | ARM repeat superfamily protein |
           chr2:309144-313499 REVERSE LENGTH=744
          Length = 744

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/676 (78%), Positives = 584/676 (86%), Gaps = 9/676 (1%)

Query: 1   MADALSLIPAAVLRNLADKLYEKRKNAALEIEGIVKQLATGGDHDKIAAVVKLLTTEFTF 60
           M+DALS IPAAV RNL+DKLYEKRKNAALE+E IVK L + GDHDKI+ V+++L  EF  
Sbjct: 1   MSDALSAIPAAVHRNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAK 60

Query: 61  SPQANQRKGGLIGLAAATVGLASEAAQHLEHIVPPVLNSFSDQDSRVRYYACEALYNIAK 120
           SPQAN RKGGLIGLAA TVGL++EAAQ+LE IVPPV+NSFSDQDSRVRYYACEALYNIAK
Sbjct: 61  SPQANHRKGGLIGLAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAK 120

Query: 121 VVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVK-DIVTESDQFSIEEFIPLLR 179
           VVRGDFI+FFN+IFDALCKLSADSDANVQSAAHLLDRLVK DIVTESDQFSIEEFIPLL+
Sbjct: 121 VVRGDFIIFFNKIFDALCKLSADSDANVQSAAHLLDRLVKQDIVTESDQFSIEEFIPLLK 180

Query: 180 ERMNVLNPYVRQFLVGWITVLDSVPDIDMXXXXXXXXXXXXNMLSDSSHEIRQQADSALS 239
           ERMNVLNPYVRQFLVGWITVLDSVPDIDM            NMLSDSSHEIRQQADSALS
Sbjct: 181 ERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALS 240

Query: 240 EFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILG 299
           EFLQEIKNSPSVDYGRMAEILVQRA SPDEFTRLTAITWINEFVKLGGDQLV YYADILG
Sbjct: 241 EFLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVRYYADILG 300

Query: 300 AILPCISDKEEKIRVVARETNEELRTIKADPAEGFDVGAILSIARRQLSSDWEATRIEAL 359
           AILPCISDKEEKIRVVARETNEELR+I  +P++GFDVGAILS+ARRQLSS++EATRIEAL
Sbjct: 301 AILPCISDKEEKIRVVARETNEELRSIHVEPSDGFDVGAILSVARRQLSSEFEATRIEAL 360

Query: 360 HWISTLLNKHRTEVLQYLNDIFDSLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVF 419
           +WISTLLNKHRTEVL +LNDIFD+LLKALSD SD+VVLLVL+VHA +AKDPQHFRQL+VF
Sbjct: 361 NWISTLLNKHRTEVLCFLNDIFDTLLKALSDSSDDVVLLVLEVHAGVAKDPQHFRQLIVF 420

Query: 420 LVHNFRIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQAXXXXX 479
           LVHNFR DNSLLE+RGALI+RR+CVLL+AERVYRELSTILEGE +LDFAS MVQA     
Sbjct: 421 LVHNFRADNSLLERRGALIVRRMCVLLDAERVYRELSTILEGEDNLDFASTMVQALNLIL 480

Query: 480 XXXXXXXXXRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASTVIQSL 539
                    R+LLK SLVN  GK+L+V+LY SWCHSPMAIISLCLLAQ YQHAS VIQSL
Sbjct: 481 LTSPELSKLRELLKGSLVNREGKELFVALYTSWCHSPMAIISLCLLAQAYQHASVVIQSL 540

Query: 540 VEEDINVKLLVQLDKLIRLLETPVFTYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFK 599
           VEEDINVK LVQLDKLIRLLETP+FTYLRLQLLEPGRY WL K LYGLLMLLPQQSAAFK
Sbjct: 541 VEEDINVKFLVQLDKLIRLLETPIFTYLRLQLLEPGRYTWLLKTLYGLLMLLPQQSAAFK 600

Query: 600 ILKTRLKAVPSFSFN-GEQLKKTSSGNPYQFLHHMSGGSHTSEDGDITADSGN-SHNGIN 657
           IL+TRLK VP++SF+ G Q+ + +SG P+      S   H +EDGD+  D+ N SH GIN
Sbjct: 601 ILRTRLKTVPTYSFSTGNQIGRATSGVPF------SQYKHQNEDGDLEDDNINSSHQGIN 654

Query: 658 FAARLXXXXXXXXXHR 673
           FA RL         HR
Sbjct: 655 FAVRLQQFENVQNLHR 670